Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATGTATGCCCCAATTGGTGTTTTCTACCAACCTTAGCTTCCATCAAAATGGGAGAATTGTAATTACTTGGGATCCTGGTGCTTTTGTGGTTGATATTGCTCTGATGAACACTCAGCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGTATGTGTATGGATACCCAATGTATAGAGTTTTACAGAAGTTGAAATAGATCAAGGCATATGAATGGAAGAAGCTTGGTAGAAGTAATTCCATCCTTGGTTAGGGAAACAGAAATGAAGGAATTGCGTAAAGAAGAATACAGTGGATTAGAATAAATATCACCAACAACAGCTTCTATTTTTCCTCAACTTCATTCCTTACACCTTTGTAGGTTGCCGGATTTGAGGACAATAAAATCTGGGGAATGCTCCTTTTCTGACCTCTGCTATCTGTATATATCCGAGTGTCCAAAATTGAAGGTGGTCCTTCCATTCACAATGCAGTTTCTCCTTCCAAATCTAGAAAGAATTGAAGTGTTTACATGTAACTATGTGGAGGAGATATTTGAATCAAACAAGGATATTCAACCCAACCCCCTTCTTGCTCTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACCTTCGCATGCTAGAAAAAATGCAGTGTCCAAAACTGAATGTGGTCTTTCCATTAACACAACAGCTTCATCTTCCTAATCTGGAAATACTTTATATGGAAGAATGTGATTCGATGGAGGAGATATTTGAATTAAACAAGGGAAGTCAACCCAACCCCCTACTTGCTTTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACGTTCGCATTCTAGAAATAATCCAGTGTCCAAAACTGAAGGTGGTCTTCCCATTCACGCAACAACTTGACCTTCCTAATCTGGAAGTACTTCATGTGGAAGAATGTGATTCGATGGAGGAGATATTTGAATCAATAAAGGGTACTCAACCCAACACCCTTCTTTCTCTCCCTAATTTAGGGGACCTTTCCTTTTCTCACCTTCGCCATCTAGAAATAAGTTATTGTCCAAAACTGAAAGTGGTCTTCCCATTCAAGCAACAACTTCACCTTCCAAATCTGATATTAATTCAAGTGGAATATTGTGAATCAGTGGAGGAGATATTTGAAGCAAACAAGGGTACTCAATCCAACCCCCTTCTTTCTCTCCCTAAATTAGAGAGAATCCAGTTGCTAAGTCTACCAAAGTTGGGTAGTATCTATAGGGGTCTAATCTTCTGTGTCTCTCTTTGTTTTATCGACGTTGGAAGTCCGAGGCTGATGAATTTGAAGCAACCAGGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGGTGATGCTCATCTTATTTATGATCATATCTTTTATCAATTTCCACAAGCAGCAGCTTACCTCCCTGATGCTCATGATAACAATGAAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAGTTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAGTTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAG MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLIHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPPQKRPFRFYNTWTSSPRFNTIVEANWGKPFINDSSLLALSSFAGNQRFLERLQRDYPEENDDDEDKDDDDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSLSLPR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731347181|ref|XP_010684856.1| (PREDICTED: uncharacterized protein LOC104899377 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 224.9 bits (572), Expect = 2.000e-55 Identity = 109/265 (41.13%), Postives = 153/265 (57.74%), Query Frame = 1
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731340214|ref|XP_010681273.1| (PREDICTED: uncharacterized protein LOC104896255 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 217.2 bits (552), Expect = 4.200e-53 Identity = 106/246 (43.09%), Postives = 149/246 (60.57%), Query Frame = 1
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731346454|ref|XP_010684465.1| (PREDICTED: uncharacterized protein LOC104899024 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 205.3 bits (521), Expect = 1.700e-49 Identity = 118/346 (34.10%), Postives = 182/346 (52.60%), Query Frame = 1
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731313775|ref|XP_010681976.1| (PREDICTED: uncharacterized protein LOC104896886 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 204.1 bits (518), Expect = 3.700e-49 Identity = 94/203 (46.31%), Postives = 125/203 (61.58%), Query Frame = 1
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731313743|ref|XP_010681618.1| (PREDICTED: uncharacterized protein LOC104896557 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 197.2 bits (500), Expect = 4.500e-47 Identity = 99/265 (37.36%), Postives = 147/265 (55.47%), Query Frame = 1
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191380 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.000e-38 Identity = 95/124 (76.61%), Postives = 95/124 (76.61%), Query Frame = 1
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DVH8_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_014650 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.600e-36 Identity = 73/180 (40.56%), Postives = 105/180 (58.33%), Query Frame = 1
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A072TV54_MEDTR (Endonuclease/exonuclease/phosphatase family protein OS=Medicago truncatula GN=MTR_8g098280 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.200e-27 Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 1
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A2Q500_MEDTR (Endonuclease/exonuclease/phosphatase OS=Medicago truncatula GN=MtrDRAFT_AC158465g18v2 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.500e-25 Identity = 80/265 (30.19%), Postives = 123/265 (46.42%), Query Frame = 1
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6U6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215240 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 9.900e-25 Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16992.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16992.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo16992.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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