Spo16992 (gene)

Overview
NameSpo16992
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEndonuclease/exonuclease/phosphatase family protein
Locationchr4 : 78859100 .. 78861610 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATGTATGCCCCAATTGGTGTTTTCTACCAACCTTAGCTTCCATCAAAATGGGAGAATTGTAATTACTTGGGATCCTGGTGCTTTTGTGGTTGATATTGCTCTGATGAACACTCAGCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGTATGTGTATGGATACCCAATGTATAGAGTTTTACAGAAGTTGAAATAGATCAAGGCATATGAATGGAAGAAGCTTGGTAGAAGTAATTCCATCCTTGGTTAGGGAAACAGAAATGAAGGAATTGCGTAAAGAAGAATACAGTGGATTAGAATAAATATCACCAACAACAGCTTCTATTTTTCCTCAACTTCATTCCTTACACCTTTGTAGGTTGCCGGATTTGAGGACAATAAAATCTGGGGAATGCTCCTTTTCTGACCTCTGCTATCTGTATATATCCGAGTGTCCAAAATTGAAGGTGGTCCTTCCATTCACAATGCAGTTTCTCCTTCCAAATCTAGAAAGAATTGAAGTGTTTACATGTAACTATGTGGAGGAGATATTTGAATCAAACAAGGATATTCAACCCAACCCCCTTCTTGCTCTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACCTTCGCATGCTAGAAAAAATGCAGTGTCCAAAACTGAATGTGGTCTTTCCATTAACACAACAGCTTCATCTTCCTAATCTGGAAATACTTTATATGGAAGAATGTGATTCGATGGAGGAGATATTTGAATTAAACAAGGGAAGTCAACCCAACCCCCTACTTGCTTTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACGTTCGCATTCTAGAAATAATCCAGTGTCCAAAACTGAAGGTGGTCTTCCCATTCACGCAACAACTTGACCTTCCTAATCTGGAAGTACTTCATGTGGAAGAATGTGATTCGATGGAGGAGATATTTGAATCAATAAAGGGTACTCAACCCAACACCCTTCTTTCTCTCCCTAATTTAGGGGACCTTTCCTTTTCTCACCTTCGCCATCTAGAAATAAGTTATTGTCCAAAACTGAAAGTGGTCTTCCCATTCAAGCAACAACTTCACCTTCCAAATCTGATATTAATTCAAGTGGAATATTGTGAATCAGTGGAGGAGATATTTGAAGCAAACAAGGGTACTCAATCCAACCCCCTTCTTTCTCTCCCTAAATTAGAGAGAATCCAGTTGCTAAGTCTACCAAAGTTGGGTAGTATCTATAGGGGTCTAATCTTCTGTGTCTCTCTTTGTTTTATCGACGTTGGAAGTCCGAGGCTGATGAATTTGAAGCAACCAGGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGGTGATGCTCATCTTATTTATGATCATATCTTTTATCAATTTCCACAAGCAGCAGCTTACCTCCCTGATGCTCATGATAACAATGAAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAGTTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG

mRNA sequence

ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAGTTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG

Coding sequence (CDS)

ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAG

Protein sequence

MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLIHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPPQKRPFRFYNTWTSSPRFNTIVEANWGKPFINDSSLLALSSFAGNQRFLERLQRDYPEENDDDEDKDDDDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSLSLPR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16992.1Spo16992.1mRNA


Homology
BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731347181|ref|XP_010684856.1| (PREDICTED: uncharacterized protein LOC104899377 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 224.9 bits (572), Expect = 2.000e-55
Identity = 109/265 (41.13%), Postives = 153/265 (57.74%), Query Frame = 1

		  

Query: 1   MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60
           MD+++ WNVRG N R++Q +VRRFI SH+I++F LLETR+K   +G MY+N+        
Sbjct: 1   MDNIMAWNVRGLNNRNKQNDVRRFIESHNIKLFGLLETRIKMKNLGSMYMNVCSGWCFTH 60

Query: 61  ------------------------------IHCHVIPRSTDTGFHCTFIYGLHDRTITEP 120
                                         +HC V  ++   GF CTF+YG +D+  +  
Sbjct: 61  NLNCHENGSIIIGWCPNAFDVNIKVVHSQFVHCWVQSKTGANGFDCTFVYGFNDQQ-SRC 120

Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180
            LWD LK I  +   AW+I+GDFNA+ + DDR+GS VR +E+ PM  C+  C +++VK  
Sbjct: 121 ELWDGLKQINSRVVGAWLILGDFNAVSNTDDRLGSQVRRAELTPMLECITECHVSDVKAT 180

Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 228
            RYYTW NKQDG  RVFS IDRVLAN  W D +D+A+V  + +G++DH P+++  Y    
Sbjct: 181 VRYYTWCNKQDGDRRVFSRIDRVLANQLWMDSYDNAEVCIMAEGEYDHTPLLVCVYPDVS 240

BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731340214|ref|XP_010681273.1| (PREDICTED: uncharacterized protein LOC104896255 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 217.2 bits (552), Expect = 4.200e-53
Identity = 106/246 (43.09%), Postives = 149/246 (60.57%), Query Frame = 1

		  

Query: 1   MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60
           MDS+L WNVRG N + +Q EVR FI+SH++++F LLETR KAP +G +Y N+        
Sbjct: 1   MDSILSWNVRGLNNKTKQIEVRNFISSHNVKLFGLLETREKAPNLGSIYNNVCSGWCFSH 60

Query: 61  ------------------------------IHCHVIPRSTDTGFHCTFIYGLHDRTITEP 120
                                         IHC +  +     F CTF+YG +D    E 
Sbjct: 61  NLSCHKNGRILIRWCPNSFTVDILQVNSQYIHCKIRTKE-GMEFKCTFVYGFNDAHSRE- 120

Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180
            LW  LK +A + +E W+++GDFNAL +++DRIGS V  +EI+PM  CM +C L++VK+ 
Sbjct: 121 ILWSGLKRLAQQPEEPWVLLGDFNALSNIEDRIGSMVSMAEIRPMIDCMQFCNLSDVKSS 180

Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 209
           GRY+TWNNKQDG  RVFSIIDRV+A   W D F+S  V ++P+G +DH P++L  + +  
Sbjct: 181 GRYFTWNNKQDGPKRVFSIIDRVIATQKWLDSFESVVVVFMPEGSYDHTPVVLQVHPEIH 240

BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731346454|ref|XP_010684465.1| (PREDICTED: uncharacterized protein LOC104899024 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 205.3 bits (521), Expect = 1.700e-49
Identity = 118/346 (34.10%), Postives = 182/346 (52.60%), Query Frame = 1

		  

Query: 1   MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLI------- 60
           MD++L WNVR  N + +Q +VR+F++SH++++FSLLETRVK+  MG +Y+NL        
Sbjct: 1   MDNILTWNVRELNSKVKQQDVRKFLSSHNVKLFSLLETRVKSHNMGRVYMNLCPGWCFTH 60

Query: 61  --HCH----------------VIPRSTDTGFHCT-------------FIYGLHDRTITEP 120
              CH                 I   T    HC              F+YG +D   +  
Sbjct: 61  TNSCHGNGRIMVGWWPHDFRINIIEMTSQYIHCAVKPTQGNAEFWCTFVYGFNDCN-SRT 120

Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180
            LW  L+ IA KC   W+++GD NAL  ++DRIGS VR +EI+PM  C+  C L ++K+ 
Sbjct: 121 ELWTGLRNIASKCNLPWVVLGDSNALSRIEDRIGSLVRMAEIKPMLDCLIECGLVDMKSS 180

Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 240
           GR+YTW+NKQDG   V S IDR + N  W ++F++A+  +L +GDFDH P++L+ Y +PP
Sbjct: 181 GRHYTWSNKQDGAALVMSTIDRAVVNKHWQEIFENAEAVFLLEGDFDHTPILLSVYPEPP 240

Query: 241 QKRPFRFYNTWTSSPRFNTIVEANWGKPFINDSSLLALSSFAGNQRFLERLQRDYPEEND 300
           QK+ FRF N W   P     +   W K  +       +      +  L +L++      D
Sbjct: 241 QKKKFRFCNAWCEYPVVMEAMRREWSKLVVGCPMYRVIEKLKKVREALRQLKKQGVCVVD 300

Query: 301 DDEDKDDDDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSR 309
            +E K  +   +++ A H +    DEA + + +  + N   +  +R
Sbjct: 301 MEEVKAREKLAIAQNAMH-NMPSNDEAIRRERVFYQANKARRVNNR 344

BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731313775|ref|XP_010681976.1| (PREDICTED: uncharacterized protein LOC104896886 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 204.1 bits (518), Expect = 3.700e-49
Identity = 94/203 (46.31%), Postives = 125/203 (61.58%), Query Frame = 1

		  

Query: 53  IHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLD 112
           IHC + P    +GF CTF+YG +D   +   LW+ LK IA K    W++MGDFNAL  +D
Sbjct: 6   IHCEIKPTQGGSGFVCTFVYGFNDLN-SRSDLWEGLKEIAKKVTGGWVLMGDFNALSSVD 65

Query: 113 DRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWG 172
           DRIGS+VR SE++PM  CM+ C L++VK  GRYYTW+NKQ+G  RVFS IDRVLAN+ W 
Sbjct: 66  DRIGSSVRMSEVRPMLDCMHECGLSDVKATGRYYTWSNKQEGTTRVFSRIDRVLANTMWL 125

Query: 173 DLFDSAKVAYLPDGDFDHYPMILNCYQKPPQKRPFRFYNTWTSSPRFNTIVEANWGKPFI 232
           D +D A V++LP+G FDH P +L+ Y  P   RPF+F N W   P     V+  W  P  
Sbjct: 126 DSYDQAAVSFLPEGKFDHSPALLSVYDVPVIHRPFKFCNVWIQYPAMMEAVKEAWRNPIH 185

Query: 233 NDSSLLALSSFAGNQRFLERLQR 256
                + +      +R L  L++
Sbjct: 186 GCPMYIVVEKMKRVKRVLRSLKK 207

BLAST of Spo16992.1 vs. NCBI nr
Match: gi|731313743|ref|XP_010681618.1| (PREDICTED: uncharacterized protein LOC104896557 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 197.2 bits (500), Expect = 4.500e-47
Identity = 99/265 (37.36%), Postives = 147/265 (55.47%), Query Frame = 1

		  

Query: 1   MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60
           MD++L WNVRG NR+ +Q +V+RFI+ H I + SLLET+VK   MG++Y  L        
Sbjct: 1   MDNILMWNVRGLNRQAKQLDVKRFISMHKIGLLSLLETKVKMSKMGNLYQRLCDGWCFTT 60

Query: 61  ---------IHCHVIPRSTDTG---------------------FHCTFIYGLHDRTITEP 120
                    I    +P S D                       F C+F+YG +D+   E 
Sbjct: 61  NNSVVDSGRIIVAWLPNSFDVAVELMTDQLIHCRVQPKGPVAPFMCSFVYGKNDKKGRE- 120

Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180
            LW SL+ +       W+++GD N +++ D+RIGSTVR  EI+  R C+  C+L ++K  
Sbjct: 121 SLWQSLRRV--HTSMPWVVLGDINVVLNCDERIGSTVRWHEIEEFRECVARCELEDMKQQ 180

Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 228
           GR++TW NKQ+G  RVFS +DR + N  W   ++ A + YLP+GD+DH P +++  +   
Sbjct: 181 GRFFTWTNKQEGASRVFSKVDRAVVNGAWRQQYEEAMITYLPEGDYDHCPGLVSLQKGVM 240

BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191380 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.000e-38
Identity = 95/124 (76.61%), Postives = 95/124 (76.61%), Query Frame = 1

		  

Query: 239 ALSSFAGNQRFLERLQRDYP-----------------------------EENDDDEDKDD 298
           ALSSFAGNQRFLERLQRDYP                             EENDDDEDKDD
Sbjct: 210 ALSSFAGNQRFLERLQRDYPGDAHLIYDHIFYQFPQAAAYLPDAHDNNEEENDDDEDKDD 269

Query: 299 DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL 334
           DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL
Sbjct: 270 DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL 329

BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DVH8_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_014650 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.600e-36
Identity = 73/180 (40.56%), Postives = 105/180 (58.33%), Query Frame = 1

		  

Query: 52  LIHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDL 111
           +IHC V   +    F+CTF+Y  +   +    LW  L++IA   KEAW+++GDFN +++ 
Sbjct: 116 MIHCKVQAITNKKEFYCTFVYAFNSAEL-RVELWKDLEMIAGNMKEAWVVLGDFNCVLER 175

Query: 112 DDRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDW 171
           +++IG  VR  ++ P R C+  C+L ++K  G YYTWNNKQ    RVF  +DRVL N  W
Sbjct: 176 EEKIGGPVRDHDMIPFRRCVTKCELEDMKYSGCYYTWNNKQTDGSRVFCKLDRVLYNVRW 235

Query: 172 GDLFDSAKVAYLPDGDFDHYPMILNCYQ-KPPQKRPFRFYNTWTSSPRFNTIVEANWGKP 231
            + F  A+  ++P+G FDH PM+L  +Q K     PFRFY  W  +P F   V   W  P
Sbjct: 236 CEEFPIAETRFMPEGLFDHSPMLLQTHQVKRKGASPFRFYKMWCEAPDFPRRVREAWSSP 294

BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A072TV54_MEDTR (Endonuclease/exonuclease/phosphatase family protein OS=Medicago truncatula GN=MTR_8g098280 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.200e-27
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 1

		  

Query: 3   SLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAP----IMGDMY--------- 62
           +L+CWNVRG N+  +Q E++  +  +   +  LLETRVKA     + G M+         
Sbjct: 2   TLVCWNVRGINKPFKQKEIKNLLHKNKFEICVLLETRVKAEKFKKVSGLMFRDWSLINNY 61

Query: 63  --------------------------LNLIHCHVIPRSTDTGFHCTFIYGLHDRTITEPP 122
                                     +  IHC VI  +++  F+   +Y    +      
Sbjct: 62  GMDAANGRIWIGWNPKFWDVKFDASCVQAIHCEVIHLNSNICFNLVAVYAFKTQE-QRKG 121

Query: 123 LWDSLKVIADKCKEAWIIMGDFNALMDLDDRI-GSTVRTSEIQPMRSCMNYCQLAEVKTV 182
           LW  +  I +K     +I GDFN+++ +DDR+ G+ V   EIQ    CM    L+EV+T+
Sbjct: 122 LWKFINDICNKTSGNLLIGGDFNSVLLVDDRLNGNLVTQQEIQDFADCMLTNNLSEVRTI 181

Query: 183 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILN-CYQKP 229
           G YYTW N Q   D ++S IDR LAN++W   F +      P G  DH  + L+  Y   
Sbjct: 182 GDYYTWCNNQASNDGIYSKIDRFLANTNWLHSFSNVVGEVYPKGVSDHCHISLDLAYPSS 241

BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A2Q500_MEDTR (Endonuclease/exonuclease/phosphatase OS=Medicago truncatula GN=MtrDRAFT_AC158465g18v2 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.500e-25
Identity = 80/265 (30.19%), Postives = 123/265 (46.42%), Query Frame = 1

		  

Query: 4   LLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLIHCHVIPRSTD 63
           L+CWNVRG N+  +Q E++ F+  +   M  L+ETR+KA     +   +     +  + D
Sbjct: 520 LVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYD 579

Query: 64  TGFHCTFIYGLHDRTITEPPLWDSLKVI--------ADKC---------------KEAW- 123
           +  +       +   +   P+  S + I        + +C               KE W 
Sbjct: 580 SAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWN 639

Query: 124 -------------IIMGDFNALMDLDD-RIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRY 183
                        +I GDFN ++ +DD R G+ V   EIQ    C+ + +L+EV+T+G Y
Sbjct: 640 FIAHTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDY 699

Query: 184 YTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYP--MILNCYQKPPQ 229
           YTW N Q   DR++S IDR +AN+ W   F +A    LP G  DH P  M ++C    P+
Sbjct: 700 YTWCNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGVSDHCPISMDMSC-PASPK 759

BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6U6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215240 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.900e-25
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 1

		  

Query: 71  IYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSC 130
           +YG H+   +   +W  L+ I       WI++GDFN+ +  DDR+GSTV  +EI+  +  
Sbjct: 1   VYG-HNDNASRLAMWRDLERIGANMVMPWIVVGDFNSPLHYDDRVGSTVSYAEIRDFQQM 60

Query: 131 MNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDH 190
           +N C L ++   G  YTWNNKQ G  RV S IDR L N  W + + ++ V +LP+G FDH
Sbjct: 61  VNKCNLVDLACTGPRYTWNNKQLGSSRVLSKIDRSLINDVWIENWPNSIVHFLPEGWFDH 120

Query: 191 YPMILNCYQKPPQKR-PFRFYNTWTSSPRFNTIVEANW 228
            PM++   ++  + R  F+F++ WTS P +   V+  W
Sbjct: 121 SPMVIRFDKQCGKGRASFKFFDMWTSHPEYLDTVKQAW 157

The following BLAST results are available for this feature:
BLAST of Spo16992.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731347181|ref|XP_010684856.1|2.0e-5541.1PREDICTED: uncharacterized pro... [more]
gi|731340214|ref|XP_010681273.1|4.2e-5343.0PREDICTED: uncharacterized pro... [more]
gi|731346454|ref|XP_010684465.1|1.7e-4934.1PREDICTED: uncharacterized pro... [more]
gi|731313775|ref|XP_010681976.1|3.7e-4946.3PREDICTED: uncharacterized pro... [more]
gi|731313743|ref|XP_010681618.1|4.5e-4737.3PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFK1_SPIOL2.0e-3876.6Uncharacterized protein OS=Spi... [more]
A0A0J8DVH8_BETVU5.6e-3640.5Uncharacterized protein (Fragm... [more]
A0A072TV54_MEDTR1.2e-2730.7Endonuclease/exonuclease/phosp... [more]
A2Q500_MEDTR1.5e-2530.1Endonuclease/exonuclease/phosp... [more]
A0A0K9Q6U6_SPIOL9.9e-2537.9Uncharacterized protein (Fragm... [more]
back to top
BLAST of Spo16992.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo16992.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 86..195
score: 3.
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 86..175
score: 3.
IPR005135Endonuclease/exonuclease/phosphataseunknownSSF56219DNase I-likecoord: 4..195
score: 8.9
NoneNo IPR availablePANTHERPTHR31696FAMILY NOT NAMEDcoord: 66..230
score: 3.3
NoneNo IPR availablePANTHERPTHR31696:SF6SUBFAMILY NOT NAMEDcoord: 66..230
score: 3.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046339 diacylglycerol metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0019530 taurine metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0005982 starch metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006468 protein phosphorylation
biological_process GO:0002213 defense response to insect
biological_process GO:0050832 defense response to fungus
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0009395 phospholipid catabolic process
cellular_component GO:0008076 voltage-gated potassium channel complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
molecular_function GO:0004000 adenosine deaminase activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0004805 trehalose-phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0047800 cysteamine dioxygenase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005249 voltage-gated potassium channel activity
RNA-Seq Expression