Spo17006 (gene) | SpinachBase

Overview


Name	Spo17006
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	At2g20820/F5H14.21
Location	chr4 : 78929383 .. 78941616 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAGCAACTCGTCAAGCAACTCAGCTGACTCGCCTTTCCTCTCCTAAACTCGCCGGTGCTTCTTCATCTTTAATCCACCGGCGCGGTTTCGCCAGCGGTGGGGGTATTATTTCTTTCCCCTTTACTTCTCTCGTTCGCTTAAGGTTTACTGTATAAATTATTGAAAATTCCAACGAAATTATCATGTTACCTGTTAGCAAACACACACAAATTGAATTGAGCTTCTTATGCATCATGCATGTGCCTACTTATAGGAATTCCTAAGTGGTGTATTTGTGTACATCCTTTCCAATTCAAGAACGAGTTTGTCAATTTTAGAAAGAGTGCCCAGCAAGAGAGGAAATAGAAGGAGAGAGAAAATGTAATGATTAGAATTAATTAATTAATATTACAATAACAGTTCCTTTTATATGGAAGAAAAACTGATCACAAATTCTTATTTACAATGGGTGTACGATAAATATTGTACACCGAAGTTAAAGTTAACGTAAAATGCATAAAAGTTACCCTTATATACGTAAAAGTTATCTATTTTTTACTAATAAAATTTTTCATTTTAATTAAAAGTATTTCTTCAAAATCACTAATAATGTATAAAATTTATCATTTAGCCCTTTTAAATGATTATCTATCAACTTATTTTTTAATAGTATAAAAGTTAGAGAAAATTGGGTAAAAGTTATAGAAAACTGGGTAAAAGTTATATTGGTGTACAATAAATTTATTGTACAACTTGTGCATACAAGACTTTTTGAAAACTGATTACAAAGTAAAGGAAAGGAGGTTTGCTGTACGAAGTTGTTGTAACAACTTTATTCATGATGATGTCATAGCATCATCATTAGCAGCAACTAAGACCTTATTATCAACACCCCCTCAAGCTAGGCATCGAACTCATGCCGAGCTTGGACAGTAAATTGGTGAACTGAGCCGAGGGCAGAACTTTTGTAAACACATCTGCTAGTTGGTGTGTTGTAGGCAAATAAGTTAACTCAATCAAACCTTCCATCACTTTCTCCCTTGTGAAGTGACAGTCCAAGTCTATGTGCTTGGTCCGTTCATGAAAAACTGGGTTCCTGGCGATGTGTAATGCAGATTGGTTGTCACAATGTAGTGTGACTGGTTTCAAGTTCACGACACCAATCTCTTGAAGGATTCTAACCATCCAGGTAACCTCTGCAGCAGCCCCAGCCATGGCTCTATATTCAGCCTCTGAAGATGACCTTGAGACTGTTGCTTGTTTCTTACTTTTCCAACTGATAGGAGAGTCACCCAACAGTAGCACATAACCTGAAATTGACCTCCTACTGTCCGGACATGAGGCCCAATCGGAATCTGAAAAAGCTTGTAGCCTTAGATGATCATTTGCCTTTAACATTATGCCTTGACCTGCTGTATGTGCTAGATAGCAAAGAGTGTGATGCAAGGCAGACAGATGCGGGGACCTAGGAGATTGCATGAACTGACTAAGTGTTTGCACTGTGTAAGATAGATCAGGACTGGTGTTGGTTAGGAAGTTCAACTTACCTACCAAGCACCTATAATAAGTAGGGTCTGGTAATAACTCCCCTTCATCAGCATAGAGCTTTAAGTTCAAAGGAAGTGGGGTAACTGCAGGCTTGAAATAAGTAAGACCTGATTCTTCTAGAAGCTCCTTAGTAACTTATTTTGAGTCATTGTTATTCCTTGAGGGAGATAACTGATTTCAATTCCCAAAAAGAATCCTAGCTCACNCTTTTGAGTCATTGTTATTCCTTGAGGGAGATAACTGATTTCAATTCCCAAAAAGAATCCTAGCTCACCAAGATCCTTGATGCTGAAAGTGGCATGAAGGTGCTTCTTTAGCTGTGCAATACTCTCCAAGTCATTTCCAGTGATGACTATGTCGTCCACATANTGAAGGTGCTTCTTTAGCTGTGCAATACTCTCCAAGTCATTTCCAGTGATGACTATGTCGTCCACATACACAGCAGCTAGTGTAATGTTGTTGCCTGCTTTCTTAATAAAGAGTGAGTAATCATTCTTGGACTGATGAAAACCCAGAACAGTGAGTTCATTAACCAATTTTGCATACCACTGTCTAGATGCTTGTTTCAGACCATAGAGAGACTTTTTCAGTCGGCAAACTTTACTCCCAGAACTAGAAAAACCTTCTGGTAACTTCATGTAAACCTCCTCATCGAGGTCCCCGTGTAAAAATGCGTTATTCACATCTAGTTGGAACAATTTCCAACCTTTACTAGCTGCTAAGGCCAATAAACATCTCAAAGTAGGCATCTTCACTACCGGGGAGAAAGTTTCCAAGTAATCAATCCCGTATTTCTGGTTGTATCCTTTTGCTACCAACCGAGCCTTATATCTTTCAATAGTGCCATCAGCTCTAAGCTTAATCTTGAACACCCACTTGCAACCAATTGCCTTCTTACCTTTAGGAAGATCTACCACTTCCCAAGTTTTATTAATAGCTAAAGCTTGAAGCTCTTTATTCATGGCTTCAATCCATTCGGGATGAGAGGCTGCCTCGGTGTATGAACTTGGCTCAACTAGTTCTGCAGACTTTGCTATTGAAGCTTGATGATGAGATGGGATATATGTGTAGCACACAAGATTACACCAATGTTTTGGTGGAGAGGTAGACGGTGTAACTGATGTGAAAACATAAGCGTCTAACCAAGATGGTGGTTTATGTGATCTACTGGATTGTCTAGGTGCTGAAGAAGTAGAAACGGGAACAAAGTTTAAGTTGGGACCAGATGAGATGGAAGAAGAGAAAGAAGAATTAGGAGGAGTGATGTTTTCTGGTGGAGGAGAAGAAGAGGAAGAAAAGTGAGGGGAAGGGACAGGTGAATGTGAAAGATTAGAAGATTGAGGAGAGATAGAAACAGGAGAAGGGACATTATCATTTTCTATGTGATCATCGTCAGGTTGAACGACAAATGGATCTGAAAAAATATGATCTGTACTTGTGGATGGAATAAAGAAATTGAAAGGTGGAGAGGAAGTAAAGTGTGTGTGAGGAGAAGAAAAGTGAAAAGGGAAGTGTTGTTCATGAAAAACAACATCTCTCGAAACCTGAATTTTATTAGTTGTCAAGTTATAGACCTTGTAGGCTTTCTGGTCTGGGGGATATCCAACAATACACAAGTTTCTGCCCTTGAATCAAATTTTGATCTACCAGATTTGAGAGTAGACACATAACACANCAATACACAAGTTTCTGCCCTTGAATCAAATTTTGATCTACCAGATTTGAGAGTAGACACATAACACAAGCACCCGAACACCCGTAAATGAGAAATATCAGGTTTAATGCCATATAACTTCTGATACGGTGAGATATTCTGAAGAACCACAAGAGGCATTCTATTTATTATGTGAGTTGCANATAACTTCTGATACGGTGAGATATTCTGAAGAACCACAAGAGGCATTCTATTTATTATGTGAGTTGCAGCCAACACACATTCGCCCCAAAGATGGTTAGGCATCTGAGCTTGGAAAAATAGAGCCCTCGCAGTTTCTAAAAGATGCTTATGCTTCCTTTCTACCACCCCGTTCTGTTGTGGAGTGTCGACACAACTCTTTTGATGTTCTATTCCTTTACTATGATATAACTCCAAGATTTTTCCTTCACAAAGTTCCTTAGCATTGTCTGTTCTAATGGTTTTCACAGTACAGGAAAATTGATTTTCAATATAAGCCACAAAGTTTACCAAAACACTCACACAATCTGACTTGTATTTCAACAAATGCACCCAAGTGTTCCTAGTGAAGTCATCAACTATTGTGAGAAAGAATCTACACCCACTATTCGTAGCATGTCTATATGCGCCCCATACATCAACGTGTAACAAATGAAAAGGCCTCATAGTGCTAGTATTACTTGTAGGAAAAGAGTTTCTACATTGTCTAGCCTTGGGGCATATTTGACAAATAGAATCAGCCTCCTTCTTCAAATCAATTTCAGGAAGTACAAGTTTCAGTTGACTAAAAGGCATATAACCCATCCTAAGGTGCCAAAGCTTAGCCACATTATTAACATCAATACTAGCAACATTATTTATATCCNCTAAGGTGCCAAAGCTTAGCCACATTATTAACATCAATACTAGCAACATTATTTATATCCACAGAAGCAGAAGAAGCCATAAGAGTAACATCAGCAAAATTACGAACCTCTGAAACAGCCGTGTTATCAGCATAGTAAAGCCCACTCTTTAGTTTACCAAGAGCTATAGGTGCTGTCAGGGAAGGGCCCTGTAGAACACAAGTATCAGATGTGAAAACCACTGAACAAATTCATATCACTGCACAACTTTGTCACTGATATCAGATTAAATTGGAAACCAGGAACAAACAGAACGTTCTTCAGGGTTATATGTTCATTAACCTTCACCGTTCCCATGTGAGTGATTTTTATCTTACTTCCATCAGGTATGGTTATGGTATTGTCAAGTCCATTAACCACATCATAGCCAGAAAACAACCTACTATCACAACAAATATGGTCGGATGCTCCACTGTCAATAATCCAACCACCACAAAATTGAGATAATAAGCAATGCTTACCAGCAAATTGAGCTTGTCCTGTTGAAGTACTTGTACCGGAACTTGCATTTGCATTCTGTGTGTTTGAACCAGCCAACTTGTATTCACCAAACATCTTCATCATCTCTTTGTATTGTCCCATTGAGATTGCTACAGTGTCATTGTCTGAATTCTCTTGATTATCAATATGGACTGTTGCAGCAAATCTTTTGTGTTTGAAGTCAGGAGGATAACCGTGTAACTTGAAGCATCTGTCAATGCTATGTCCCGGCGCTTTGCAGTGTGTACAATAATAGTTAGATCCTCTTTTGGATCCAGTAGTCTTTCCAAGACCTCCAACATGTGGTGGTCCTGAGCTAGAACCACCCTTGTAGTACTCTCCAGTCTTATTGTCACCAAACCTTCTGTTGGCTGCAAAAGCCATGAGTTCATTCCCTTGATTGTTCTGAGCACTCAACTCCCTGTGTCTCTGTTCTTGAAGAAGAATTCTGTATGCGTTAGACAGAGGTGGCAAAGCCTCCATCATCAAGATATTAGACCTCACTTGCTGATATGCCTCTTTGAGTTTCATGAGAAAATGAACCAAACGTTGATCCTGTTGAATCTTCATAAATTTCTTAGTCAAATTGCAGGTGCAACCACCACACTCACAACAAGGAAGAGGAGTAGCACTATCCAATTGGTCCCATAAGACCTTCATCTTAGTGAAAAATGATGAGATGTCATCATTCTCCTGACTCAGGTTTGCAAGTTCCTGTTGAAGAGAGTATAACTGAGCTACAGAATAATGACCAAAACGATCCTCTAAGTCTTTCCACATAGCCCTTGCTGTAGGTAAGAGCAAGACACTCTTGGCGATCTCCAGCCCTAAAGACTTCAGAATCCAACCACATATCATGTTGTTTACACGATCCCAAGCTTTCGCCTCTATNAGCCCTAAAGACTTCAGAATCCAACCACATATCATGTTGTTTACACGATCCCAAGCTTTCGCCTCTATCACATTTGTTGGTTTGGGCAGTGTTCCATCAACAAAACATGCCTTATTCTTAGAAGATAAGGATATCATCATCATCCTCTTCCATTCACCATATCCAGCTCCATCAAATGGAGGCGATACTAATTGATGAGACGTATTTTCAGCAGGATGCAAGTAGTAAATAGAACTAGGATTTTGAGTAGGTTCCATTTGAGTTGAGGAGTCAGAATCAATTGCCATATTAGCGTTGAGAATTGAAGAATTTGGTCAAAAATTTGGTCGAGACTTCTTGAAATTAATTCAAGNTTGCCATATTAGCGTTGAGAATTGAAGAATTTGGTCAAAAATTTGGTCGAGACTTCTTGAAATTAATTCAAGAAATTAGTTCAAACAGGATGTAAAAACAACAATTGCCAGGAAGAAAGTGGTGAAATTAATCGACAATTTCCAGATTAAACCACAAGAAATTCAGAGAAATGAGTGAAATTACTACGAAATTGGAGCAATATCAACAATCAGAACAACAAATGGGGAAGAAATTGCAAAGATCAGAGAAAACATAGAGAAAATTAGAAACCAAACCAGAGAAATTAGGTTGAATGTGACGAAATCGGAAAAATTCGAGCTAATCAGCAAGAACCAGCAACATCCAACAATTATGATCGAAGGAGAAAAAAAATGCGGAAGATGATCTTAGTAGTCTGATACCATGTCAATTTTAGAAAGAGTGCCCGGCAAGAGAGGAAATAGAAGGAGAGAGAAAATGTAATGATTAGAATTAATTAATTAATATTACAATAACAGTTCCTTTTATATGGAAGAAAAACTGATTACAAAGTAAAGGAAAGGAGGTTTGCTGTACGAAGTTGTTGTAACAACTTTATTCATGATGATGTCATAGCATCATCATTAGCAGCAACTAAGACCTTATTATCAATAGAGTTTGAATTCGCATTCAGTCCTTTTATCAAATCAGGAGTTTCGTGAAATTTTATTCATACAGCCAGAAACTTTGGAAGGGTGATGAGAGCTTGTAAGCTTATCTCAGTGATATTACTGTTTCAAACTTTCAACAATCTTGTGATCTCGAAATAAGTAGAAGGTCTTACCCAGTAAAACACATAGAGCGTAGGGTCTGAGAAAGGTCCAAATGTACGCAGAGGTTGATCAAAACCCGTGACCTAGCTGATAACAAGTAGACACTAATTAAAAATTTGAAAGGTGTAGTTGCATATAAGTTTGATCGATCTTGATATCTATGGCCACTAATTGCATATTTAATTTGGTTGCCTTGCAGATCATCATGGTCCTCTGAAGGTGAAGTTTTGGCAAGACCCGCTAAGCCCATCGAGATGGAAGAAAGAACAGGTGAGTATTGTATCATAGGCTTTGTTTACTTGCTAAATTGGCAAGCTTATATAAATATCTTGATGAACCTGCTAAATTAATACTATGAACCTCTGCTAAATTGATATACATGTCTTAATGAACCCTTTTTGACATATTAGTGTCCCGAGAACATGCAGTTTCCTTATTACTTGATTTTCCAATCCGTAAAGTTAGAAAAGAAGCTTCGAGGAGTGAAGGAATTAGGAATTAGGAATTAGGAATGCTTGTTACTTACTCCTTGAAATGACATTTCCACTAAAAGGTTAACGGTAGAGGTGAAATGAAGGATTCAGAGAATTCTTCATGGTGCTATATATTTCTTACATTGGGTTTGATAATTGTAAATGCTTATTGTTTGCAGTTTGTCATTGTTTCTCTGGTTGGTTGGGGCACGCTAATCTATGGAGGCTACAAGTTCTTCTTCACAGGAGATCAAAAAGAAAACAAAGACGAGGTTAGCCATGTTTATTGTTGCTCTCTTGAGTCTTGACAGCAGAAGCAGAACAACCAAGTAATTAGGGTTCTCTAGAAATATAATATCTACTTGTTCAGTAACAAATTATTTGCTTTAACATTGTTTTGTATAGCCCCTCTGCTATCCACTTAACTTCAATTACCTTCTTGAAAATCATCACTTGTCTCTATTTTTCATTTCCTTTTGCAGAAAGTTGGGAAATCGCCAAAGTGAGATGTGGAAATTCAGGCGGTCCTGTTGGATGACGCTAGCTGCCAGCTGGATCTAGTGTTGTAATGTTGTACGTTATTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTCCAATATGTATCCTGTTATGTACTTCATGACTTTGTATGATATGAAAACATCCTTGTACAAAGGTTTGCATGTAATTAATACGAAGTATAGTTTATTCAACAAATCCCTGTATACTAGTGTCTATGTTTGTTTAGGACCTGATAGAGTACTGAAAGTTTGTTTCTTCAATGGTTGTTTCAGTTAACTGTCATTCCTATTTGTATCCCGAAGCTGTCAGTTTTAATGGGCTCGTTCAATATCACCACCCGTTTTCAGTTTTTAGTTTTTTTAAAGTCATATGATTTAGGTTGAATCACGAACTAAGAAATAGTAATATGTACAGTTGTCATGTTGATTTTAAAATCTGACAACAAAAAACTGGAAAATGCTTTTCTCGTTTTCACATTTTAGTTTTTAGTTTTATAAAAAAAAAATCGATATCAAACGGGAAGTTAATGATTTCTGTTTTGTTCTTGTATCTGGGGGAGTGCAGGATAAGGTGATCATTTTCAAAAGCTTAAGACTCAAAAATTGCAATCCTCTGATAGAATAGTCGCTCATCATTATGAACAGCTAGAAGAAAATATTCACAATAACAAGTTTGAATTATCGCTTCATCACTAGTAAATAGTAATGATCAAAAAATTCGATCAAAAAATTCACAAGTTGGGTAATGGGTATAACTCAAGGATTTATAATTGATACATACCTTTTTACTCCTAAATATCAAAAAAATCATCCAAAATGAACTGAACGAACCTATCAAAATTTTGTATCAAGATAATTAACATTACAGTACATTGTACAAATTTTATCAGATTGAAAGTTACACTACATGAGAACATTGATATGCAGCTTAGAAATCTAGGTGTGACTCGCGTGAGGCCGACTCCACCAAGCTCATCCTTGGAAAAAATACGTTACATGATGAACTACATAAAATCAATTCATGTAACCTGACAATAGAGTATACACATATATACATCCTTGCGATATTTGCACCATGAAACACAGGGGTTTGCCGTTTGCTACACCAACTTGGGTGCTAAATACATAAGAAAGTTCAAATTTTGACGTTGTAACAAAACATAGCATTACCTGCACCGGCTACAACAAGGGATAAAATCTTGTTTGCTTCAATCTGCATCTTTCACTTCAGCTTCAATATCAACTACAGATGTTGAAGCATTTTTATCTGCAAATAAAACATTACTGGTATTTACAATGATAGAAATTTGAACCATTCCAGTAATAACTAGCTAATTGATCACATTCTATTGCTAGTCTTAATAATAATGTTGTTACCCAATCATCTATGCTCCAAGATTTTCTATTGTGTGGTAGTTGACAGGGTATAAGTTTATTTGATTTAGTTAATGGGTAATAGGCCATTTACTTTAGGAAGTGTGTGACCAACTCATGCATGGTATAGTCGGTTCTACCTGGTAAGCTACAAGAAACACTATTTGTTTTCTCATTTGGTTAAGTATAGCAAGGGATAAACAAAATATGCATTTTTCTTGAAACTATGTCTCCACAAGATGTGAAAAACTTAGCAATACTTGATATTTACTATGTGCTAACAACCTGATACACTATAGCCACTAATGAGAGTTTGTGAGGAAAAAAAAATAGATTTACCCGACAACAGGTTGAAAGACGAATTTTACAATGCAAGATACAATTGCGTGTTCTGTTCCAAAACGTCGTAATCATTCTCTTTCATATGATTGCAAACATTGAACGCACTCACCAATAAGTTTGCATGACACTTAGGGGTGTTCTTTTCCCCTTCAAAAAATAAGTTTCATATCAATTAGGTACATATAAGTAACAATGAGCACTAGTAAGTTCAATTTTTTAAAATTTTAAATTTTATTATAAATTCAGATAAGTTCGATAAGTTGAAAAAAACGCATGTAGTAAGGCTCTGTTTAGTTCACCTTATTTCAGGACCTTATTACTTATTTCAGATAGTTAAGATTAGAAAGAATAAGTTCAGATCACATCAGATTACAAAAAATAAGTTTACATCAGATAAGACTAGATCAAATCAGGAGAAATAAGGTGAACTAAACGGGCCTAAGTGAGAAGAATTAGTAAACGTGAAAGATGGAATCAAATTCAAGTTCTCATAACTCTTCTTCTTTTTTCCCTTCTTCACATATAGTAAAGAGTTAATATTTTTCCCCTCCTTCAATAAAGATTTACTTTCTATTTGTCATATCTAACTTCTCTTATCCTATTCACTGAAGTTATATGGGTTGCTTTATCTTCCTATTATAAACACCTAGAACCATATGCCTAAATAGGATGTTTCTAACATATTGTTGAAGGAAGTAATGCCCTTGGTTCAAGTATGCATTTAATGCTAAGTCTAATAAATGCGGTTTAGTATTAATTAACAAATTAATAAATTCAGTGAGATCAAGTGAACTGAATGTCTAGCTAGAGGTCGCTTCAGTTTAAGTGGAATTAATAATATTAATCCATAACTTACTCTTGACTGAACCCGTAGGGTCACACAAATAGTACGTGAACGGATCAAGTATTTAAGTAAATATATTATTCATTAAGTACTCCATTTATGAACATTCGGAAACGACGGATCTCGGTTCCAGTGGAAGCTGAAATCGTCAAAAGGCAAAATAAAGAATACTCCGGAAATGATAATATTGCTGGAAACGTAAATATGGTTCATGACGGAAATATAAATATTATCCAAATCGTAGATGTTGCCGGAAACGGAAACGGAAACATGGCTTGTATCGGAAAATATTATCGGAAATAGAAATATTGTCGGAAATGGAAATATTACCGGAATCGGAAATATTGTCGGAAAATGAAATTATTTTTGGAATCGGAAATATTAACGGAAACGTAAATATTTGTTCGAAACGGAAATGAATTCCGGAATCGGAAAACAAATCGAAAGCTCGACGAGCGACAAGCCGGCAAGCGAGTCGGCCCATCGCTCGACAAGCAAAGGCAGCACCATGGGTAGCGCCCTACGAGCAAGGCAACAGCCATGAGGCCGCGCCCTGCGAGCAAGGCCGCAGCCATGGGCCGCGCCAAGCTACAAGCAAGGCAGCAGCCTCATGGGCCGCGCCAAGCTGCAAGCAAGGCGGGAGCTCATGGGCCGCGCCAAGCCTGCGGCAAGGCAGCAACGCATGGGCTGCGCCCAGCCTGCGAGCACCGTGTGCAAGGCCTACCAAGGCATGGGCCGAGGCAGCACGCACACCCACGTGGGCCCTTGTGGCTGCGTTGGGTTATTCGTCTTGGGCTCCAAGAAATATCCGATTGCTTAATTCCCAAGTAACCTTGGATTAAGTATTCCTACTTTTACTAGAATTCAAATAATTAAGAGTTTAATTATAGTTGCAATTCTAATTGAATAAGAATTTCAATCCTAGTAGGTTTGGTAATTCTATTCCTAGTGAAACTCAAATTCCTTATTTTCTACACTATAAATAAAAGGCTAGGGCCTCATAATTATAGACATCAATTGAATTGAAAACATATTCTTTATTCCCATTGTGTTCAAGGGAGAACATAATACCAGCCTAACCGAATACATAAAACCTTAAGTAAAATCCTAGTTGGTTGAACCTAAGGCGGATCCGAACGTGCTGTGGACTTTCTACGGAAGGACAACGTTTGGGGCTCTAAAGACTTGTTCTTGTTCGGTTAGGGAGCAGCTAGGGAAGGCACGCATCACATTGTATGTCACCTAAATTATGCTAATTGACTATGTGGCAATTAATTTGGATTCTGGCTTTATAGTTTTTCCGCATGAATTATATTGTTGTATTATTCATAACCTAACAATTGTAACATATTGCAACAGTTTTATCTTTCGTAAGTTTCACCAACAAAATTACCACACATGTCCTTCTTTCATCCTACCTAGTACATTATTAAATACCACTCTATCTCTCTTTTTGCTATTTGCTCCCTCCACCACCACTTCCCTACCTTGCTAGACACACTACCCCACACCTTTGTCACCCCTTTCCTTCCCTTTTCATTACCACCTTCCTATGTCCTTTTCCCACCCTTATATGATGTTGTAGATCCAGGAAAAATGATGGCGCCATTAAGCACCGGATGTCGCAGGCAAGAATCCTCCCACTATTTCCACTGACTCTAGGGTTCCAGCCACCAAAATCTTCTCTACTCCATGCTCAATAGCAAAGCCGCTTTCTCACACATTGTTCCAGGTGTAGGTTGTAGTGGTGGCTTGATGGTGCTATGGACAGCGAGGGACGAGGGGTGTGGTATGAGGACTTGAGGTGGTGAATTTCGAGGTTATGGTGAGGTTTGCTACGGTGTTGTTGTGGATGGGTGGTGAGAGTGACTGATGAGAAGGCTGGGTAATTTAAATGAGTCTCTCCTTTTTTTTTTCTTAATTAATGTGCCAAACACAAGTGTTGCAATCTTAAGAAAACGGAAGTAATTTAGAATAGATGTTGATTGCTTTACCTTCCAATTTAAAACTTTGTTTCGTACTTTAGATTTATCCACCTCTTGATGGATGA

mRNA sequence

ATGGCGGCAGCAACTCGTCAAGCAACTCAGCTGACTCGCCTTTCCTCTCCTAAACTCGCCGGTGCTTCTTCATCTTTAATCCACCGGCGCGGTTTCGCCAGCGGTGGGGATCATCATGGTCCTCTGAAGGTGAAGTTTTGGCAAGACCCGCTAAGCCCATCGAGATGGAAGAAAGAACAGTTTGTCATTGTTTCTCTGGTTGGTTGGGGCACGCTAATCTATGGAGGCTACAAGTTCTTCTTCACAGGAGATCAAAAAGAAAACAAAGACGAGATTTATCCACCTCTTGATGGATGA

Coding sequence (CDS)

ATGGCGGCAGCAACTCGTCAAGCAACTCAGCTGACTCGCCTTTCCTCTCCTAAACTCGCCGGTGCTTCTTCATCTTTAATCCACCGGCGCGGTTTCGCCAGCGGTGGGGATCATCATGGTCCTCTGAAGGTGAAGTTTTGGCAAGACCCGCTAAGCCCATCGAGATGGAAGAAAGAACAGTTTGTCATTGTTTCTCTGGTTGGTTGGGGCACGCTAATCTATGGAGGCTACAAGTTCTTCTTCACAGGAGATCAAAAAGAAAACAAAGACGAGATTTATCCACCTCTTGATGGATGA

Protein sequence

MAAATRQATQLTRLSSPKLAGASSSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQFVIVSLVGWGTLIYGGYKFFFTGDQKENKDEIYPPLDG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17006.1	Spo17006.1	mRNA

Homology

[Close]

BLAST of Spo17006.1 vs. NCBI nr
Match: gi|731329436|ref|XP_010675589.1| (PREDICTED: uncharacterized protein LOC104891580 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 134.0 bits (336), Expect = 1.400e-28
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 1

		  
Query: 4  ATRQATQLTRLSSPKLAGASS--SLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQF 63
          ATRQA  LTRLSSPKLA A+   SLIHRRGFA+G DHHGP KV FWQDPLSPSRWK EQF
Sbjct: 7  ATRQAVYLTRLSSPKLAAAAPPLSLIHRRGFATGVDHHGPSKVNFWQDPLSPSRWKAEQF 66

Query: 64 VIVSLVGWGTLIYGGYKFFFTGDQK 87
          VIVSLVGW  L+YGGYK+F   D+K
Sbjct: 67 VIVSLVGWSALVYGGYKYFIEKDEK 91

[Close]

BLAST of Spo17006.1 vs. NCBI nr
Match: gi|731329434|ref|XP_010675588.1| (PREDICTED: uncharacterized protein LOC104891580 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 132.1 bits (331), Expect = 5.300e-28
Identity = 64/84 (76.19%), Postives = 69/84 (82.14%), Query Frame = 1

		  
Query: 4  ATRQATQLTRLSSPKLAGASS--SLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQF 63
          ATRQA  LTRLSSPKLA A+   SLIHRRGFA+G DHHGP KV FWQDPLSPSRWK EQF
Sbjct: 7  ATRQAVYLTRLSSPKLAAAAPPLSLIHRRGFATGVDHHGPSKVNFWQDPLSPSRWKAEQF 66

Query: 64 VIVSLVGWGTLIYGGYKFFFTGDQ 86
          VIVSLVGW  L+YGGYK+F   D+
Sbjct: 67 VIVSLVGWSALVYGGYKYFIEKDE 90

[Close]

BLAST of Spo17006.1 vs. NCBI nr
Match: gi|802586020|ref|XP_012070648.1| (PREDICTED: uncharacterized protein LOC105632806 isoform X2 [Jatropha curcas])

HSP 1 Score: 129.0 bits (323), Expect = 4.400e-27
Identity = 62/92 (67.39%), Postives = 71/92 (77.17%), Query Frame = 1

		  
Query: 3  AATRQATQLTRLSSPKLAGAS--SSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQ 62
          AA RQA  L R+ SPK+A  S  +SLIHRRG A GGDHHGP KV FWQDPLSPS+WK+E 
Sbjct: 6  AAARQAANLARICSPKVATTSQTASLIHRRGLAGGGDHHGPPKVNFWQDPLSPSKWKEEH 65

Query: 63 FVIVSLVGWGTLIYGGYKFFFTGDQKENKDEI 93
          FVI+SL GWGTL YGGYK F  G +KE K+E+
Sbjct: 66 FVIISLAGWGTLFYGGYKLFTRG-KKEKKEEV 96

[Close]

BLAST of Spo17006.1 vs. NCBI nr
Match: gi|1009110594|ref|XP_015896395.1| (PREDICTED: uncharacterized protein LOC107430112 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 128.6 bits (322), Expect = 5.800e-27
Identity = 60/94 (63.83%), Postives = 73/94 (77.66%), Query Frame = 1

		  
Query: 4  ATRQATQLTRLSSPKLAGAS--SSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQF 63
          A RQA  L RLSSPK A  +  +SL+HRRG A GGDHHGP KV FWQDPL+PS+WK+E F
Sbjct: 7  AARQAANLLRLSSPKSASTAQAASLVHRRGLAGGGDHHGPPKVNFWQDPLNPSKWKEEHF 66

Query: 64 VIVSLVGWGTLIYGGYKFFFTGDQKENKDEIYPP 96
          VIVSL GWG L+YGGYK+F  G +K+N++E + P
Sbjct: 67 VIVSLTGWGLLLYGGYKYFTKG-KKDNEEEAFSP 99

[Close]

BLAST of Spo17006.1 vs. NCBI nr
Match: gi|225461330|ref|XP_002284579.1| (PREDICTED: uncharacterized protein LOC100252136 isoform X1 [Vitis vinifera])

HSP 1 Score: 128.3 bits (321), Expect = 7.600e-27
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 1

		  
Query: 3  AATRQATQLTRLSSPKLAGASSSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQFV 62
          A  RQA  LTRLSSP  A  ++SLIHRRG ASGGDHHGP KV FWQDPLSPS+WK+E FV
Sbjct: 6  AVARQAGNLTRLSSP--APLATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKEEHFV 65

Query: 63 IVSLVGWGTLIYGGYKFFFTGDQKENKDE 92
          IVSL GWG L YGGYKFF  G +K+NK+E
Sbjct: 66 IVSLSGWGLLFYGGYKFFTKG-KKDNKEE 91

[Close]

BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CH27_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g087200 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.600e-29
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 1

		  
Query: 4  ATRQATQLTRLSSPKLAGASS--SLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQF 63
          ATRQA  LTRLSSPKLA A+   SLIHRRGFA+G DHHGP KV FWQDPLSPSRWK EQF
Sbjct: 7  ATRQAVYLTRLSSPKLAAAAPPLSLIHRRGFATGVDHHGPSKVNFWQDPLSPSRWKAEQF 66

Query: 64 VIVSLVGWGTLIYGGYKFFFTGDQK 87
          VIVSLVGW  L+YGGYK+F   D+K
Sbjct: 67 VIVSLVGWSALVYGGYKYFIEKDEK 91

[Close]

BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Match: E0CSR7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03480 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.300e-27
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 1

		  
Query: 3  AATRQATQLTRLSSPKLAGASSSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQFV 62
          A  RQA  LTRLSSP  A  ++SLIHRRG ASGGDHHGP KV FWQDPLSPS+WK+E FV
Sbjct: 6  AVARQAGNLTRLSSP--APLATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKEEHFV 65

Query: 63 IVSLVGWGTLIYGGYKFFFTGDQKENKDE 92
          IVSL GWG L YGGYKFF  G +K+NK+E
Sbjct: 66 IVSLSGWGLLFYGGYKFFTKG-KKDNKEE 91

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BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Match: A0A061F636_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031330 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.900e-27
Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 1

		  
Query: 6  RQATQLTRLSSPKLAGAS---SSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQFV 65
          RQA  L RLSSPK A A+   +SLIH RG ASGGDHHGP KV FWQDP++PSRWK+E FV
Sbjct: 9  RQAANLARLSSPKSAYATPQAASLIHMRGLASGGDHHGPPKVNFWQDPMNPSRWKEEHFV 68

Query: 66 IVSLVGWGTLIYGGYKFFFTGDQKENKDE 92
          IVSL GWG L+YGGYK +FTG +KE K+E
Sbjct: 69 IVSLTGWGLLLYGGYK-YFTGGKKEGKEE 96

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BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Match: A0A067KVC1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00695 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 9.000e-27
Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 1

		  
Query: 3  AATRQATQLTRLSSPKLAGAS--SSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQ 62
          AA RQA  L R+ SPK+A  S  +SLIHRRG A GGDHHGP KV FWQDPLSPS+WK+E 
Sbjct: 6  AAARQAANLARICSPKVATTSQTASLIHRRGLAGGGDHHGPPKVNFWQDPLSPSKWKEEH 65

Query: 63 FVIVSLVGWGTLIYGGYKFFFTGDQKENKDE 92
          FVI+SL GWGTL YGGYK F  G +KE K+E
Sbjct: 66 FVIISLAGWGTLFYGGYKLFTRG-KKEKKEE 95

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BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Match: W9R408_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010181 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.800e-25
Identity = 60/91 (65.93%), Postives = 67/91 (73.63%), Query Frame = 1

		  
Query: 3  AATRQATQLTRLSSPKLAGAS--SSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQ 62
          AA RQA  L RLS+PK A  +  +SL+HRRG A GGDHHGP KV FW+DPLSPSRWK+E 
Sbjct: 6  AAARQAANLARLSTPKPASTAQATSLVHRRGLAGGGDHHGPPKVNFWEDPLSPSRWKEEH 65

Query: 63 FVIVSLVGWGTLIYGGYKFFFTG--DQKENK 90
          FVIVSL GWG   YGGYKF   G  D+KE K
Sbjct: 66 FVIVSLTGWGLAFYGGYKFLTRGKKDKKEEK 96

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BLAST of Spo17006.1 vs. TAIR (Arabidopsis)
Match: AT2G20820.2 (unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.200e-8
Identity = 23/62 (37.10%), Postives = 38/62 (61.29%), Query Frame = 1

		  
Query: 1  MAAATRQATQLTRLSSPKLAGASSSLIHRRGFASGGDHHGPLKVKFWQDPLSPSRWKKEQ 60
          MA+  R+A  L ++ S +++  ++S+  RR  A   DHHG  KV FW+ P +P  WK+E 
Sbjct: 1  MASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEH 60

Query: 61 FV 63
          ++
Sbjct: 61 WI 62

The following BLAST results are available for this feature:

BLAST of Spo17006.1 vs. NCBI nr
BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
BLAST of Spo17006.1 vs. ExPASy Swiss-Prot
BLAST of Spo17006.1 vs. TAIR (Arabidopsis)

BLAST of Spo17006.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|731329436\|ref\|XP_010675589.1\|	1.4e-28	76.4	PREDICTED: uncharacterized pro...	[more]
gi\|731329434\|ref\|XP_010675588.1\|	5.3e-28	76.1	PREDICTED: uncharacterized pro...	[more]
gi\|802586020\|ref\|XP_012070648.1\|	4.4e-27	67.3	PREDICTED: uncharacterized pro...	[more]
gi\|1009110594\|ref\|XP_015896395.1\|	5.8e-27	63.8	PREDICTED: uncharacterized pro...	[more]
gi\|225461330\|ref\|XP_002284579.1\|	7.6e-27	71.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17006.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0J8CH27_BETVU	9.6e-29	76.4	Uncharacterized protein OS=Bet...	[more]
E0CSR7_VITVI	5.3e-27	71.9	Putative uncharacterized prote...	[more]
A0A061F636_THECC	6.9e-27	69.6	Uncharacterized protein OS=The...	[more]
A0A067KVC1_JATCU	9.0e-27	68.1	Uncharacterized protein OS=Jat...	[more]
W9R408_9ROSA	3.8e-25	65.9	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo17006.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo17006.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT2G20820.2	2.2e-8	37.1	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35292	FAMILY NOT NAMED	coord: 1..91 score: 4.2
None	No IPR available	PANTHER	PTHR35292:SF2	EXPRESSED PROTEIN	coord: 1..91 score: 4.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006449	regulation of translational termination
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0018444	translation release factor complex
molecular_function	GO:0003747	translation release factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15626	0.68	Barchart \| Table
Spo21581	0.68	Barchart \| Table
Spo01979	0.66	Barchart \| Table
Spo02919	0.66	Barchart \| Table
Spo07235	0.66	Barchart \| Table
Spo21631	0.66	Barchart \| Table