Spo17015 (gene)

Overview
NameSpo17015
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 42237683 .. 42241750 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGCATCTCAGTACTTTATTCCCTCTTCTTTAGTTCGGATTTGTTTTGTTTTTTAAGTAATTGTTGCAATTTTTGTTGTTTTCTTTGGTTTTGTTTTTGAATTGTTTATAATTGTTATCCAATAATATTTATAGAGTTTAAAATTTTAGCAACTTCTTGTAAATTTCAGATTTTATTATGAGTATTTATTCTTTCTTTTGGTTCATTTTGTTGTCTTTTTGTCCACTATAGATGCAATGTTTGAACACACAATTGAGAAGCTGACACATGGTGTCTTAATTCCTAGAATATGTTACACAAACGGAGGTATTTGTTGTATGGAATGGGACATCAGCTTATGATGTATGCTATTGCTCTAACTAACTTTTATATGTGCAGGCAGACCTCATGTAGCAACTATAAATACATATTCCTTTTTTCTCTTTTGGTGCTGCTGGAAAATTGGGTTCATGACACATTATTTTTGAGCTAAAGAAGAGCATGGTTGTACCTACACTTATTAGGTAATGACTACTTATCTTCTGAACTCTGAATAATCCTCGCTGTAAATGTTTTCCCTTAGAAGCAATAGCTGGGACTTGCAATCTACCGACTAAGAGCCTTATTGAATACGCTAGTAGTAAGTATGTCACTATGAGAGTTTAAGATTGTGTGCTCATTCTAGATATTCTGACTGCTCCAAGTTTGCTGACTTTTTGTGTTGTGCTTAGTGGAGATTTGATTGAAGAAGCCCAATTCTAACTTGAACTTACTGCCAAATTTTAACATTTTCTAGTCCGCAGGTTTTAGGTTTATAGTCTAACTTTAAGTGTAATCTAGTTAGCCATATGAATTGACTTTCATTATGAAAGCATAAGATTTTGTGCTAGAACTTACTGATCGTGATAGTTGAGTATGGGACTATGAGTATATGAACTCATTTATAATTGTATTATAGATATCCAATCCCCTACTTTTCACCATTTAAGAAAATGATTTCAAGTGGGTTCTTCATTTAACATGCCTACTGGTTATTGGATAGTAATAGCAGCAAATTACATCAGAATGTGTATGGGAAGTACAATTATAACTTAGATTAGTTCTGTTAGTACTTAGGAGCTTCATTCATATTTCTCTTATTTGGATATATTATTGGTCTTAGGTTGATGTTTAGTTTTAATGCTTCAAAATTATTAGTATAGGTTGTTTAATGGTTACAACTAACAACGTGCTTCAATGCACTTGATATATTCCTCAAGGATTTCATGACAATGTATAATGACTACAAGTATTTTGAATTTTTTGGTCCCCAGATTAAGATGTTTATGCAACTTAAGGGTGCCTCGTTCTAGTAAAATGTTTTTTTCACGTCTGAAGTTGTTGACTCTTGTTTACAGATTTACAGAAACACTATTCCAACAACCCGTATTTGAGATTGAGTAACAGCTCAGAAACAGAACAAATGAATAACTGAATTGTGTTTTGTCAAATTCTTCTCAGCAAAATCAAGCACAATTTTGAATATGTGGGTCTAGAGTGAGGATTTAATAGATTTTGTATGGAGTTTAAAGTTTCAACTTTGAACAATGAGCTTTTAATAATACTCCACGTAAAGGAAGCTTGTATTTTTCTGGTTGTGGAAATTATTGTCCTTTTATCTCTCATTTAAAGGGAATTCTTTCGCCTTGCTTCACTTGGTAACTCTTTCTGTTTATATAACTTTGTTTCAGGGCCAAATCTAAACTATCTTTTTTAGAGGAACTGTAAGACTTATGTTGGATGTGCTTATTGACATAGTTTGCTTTTAAAAAAAAAGAGACAAGGTTGTTACTGATAACAGACCGATACAGTAATTCATGAGGATGACTCACTACGTGACTACGTACTGACTGAAGAAGGTATTTTCTAATTTATTTGATGATCTCGCTTCTTACTTTTCGATAGTGTAATTTCATTTGTCAATACTTGTTGGTGATACCATCAGTATATAATTCTACTCCAGCCATCTTGTGTATTTATATATTTTTGAGTCATATCTTTTCTTTAGGGCTTTGATGAGTACATGAATTTAGTTTTAGATGATGCTGAAGAAGCGAATGTCAAAAAGAAGACCAAAAAATTACTTGGTGAATTAAACTGTCAATGCTGGAAGGAGACAATATTACTCTGATGCTGAATACGTAAGTCTTAATTGGTTTTTCTTTGCGTGTTATATTCGTCATTCATTCTTTTCTGATAACCTCCTTGTCACTTGTTCTTTCTGACAGTCTCTTGGTCATTTGTGCTTCTTTGATCTCTCTGTTGTAGGTTCCTTTTAACCCCTCTTTAGTTTAGGATAAGGTTTATAACACCTCTTCTCTCACTCTATTTTAACCTTATTTGCTTTTCTTAGTTTAGATGAACTGGCAGTGAATGGCCCAGGAAAAGTCTAATGTGTTGTGCTATGTTAAGTGGACAATAGCTCTATAATTAGTTGGGTAAATTAAGCTTCTAACTGGGAAAACAGGTTCCGTAGAATCAACAGTATATATTCTATCTTCTTTCAAGTTCGTATTTTTTTCCCTTTGTTTAGGTAGTTGTTGTGGTTCTTTTAACTTGTTATCAGGTTTATAATCCTGCAATAATACTTCTTGAACTTAAATTTTAGCGGGTCGCTTTATCTTATTTATCTTCTGATATGAGTTAATAGTATGTGAAGTACCTAATAAATTTTAATCTTTTAATGGCTTTCCTATATTGCTAATACTTGAATTTATTGCATATAACTTATTTCTATGAATTTCTACTTATAGGAAGATGAACATGGAGAAGGTATGAGCCTAGTAGAACTTTGGCAAGCTTCTTATAAGAAGGATGGAACCTTTATTGACGGCACAATAACTGAAGAGATGAGAATGCAAAGATGATAGTCAATGACAACACTGTTTTATAGGTTTTAGAATCCGTTCGCAGTGGCTAACCCTCCGGTATTATTTAAACCCTTTCACTTAGAATTTAAACCCTTTCGTATGGCTAACCCTTTCGCAGTGACAACACTGTTTTGTGCAAAGACACTGCACAAATAGCCTTGCGTATGGCTAACCCTCCGGTATTATTTAAACCCTTTCACTTGGAATTTTCTACTGCTTTCTATGTCTGATTATGTGAAGTTTGTGATCGATGGACTAACTATAATAGTTAAGATCTAACGAACTTTACAAAACTGAACTGATCTGAACTTCTGCCTGCCCTTTGCTAATTCTAAAAATTCAAAAGAAGAAACTGGCAGAGACCAGCACCAAGCCCTTTTCTGCGATATCATAACAAAAGGAAATTCTTGCTATTTAACCTGGTATATATTGCTTATTGCTGATTCTGAGAAATATTTGTTGTCTAACTTATGATTAGTAATACTACTCGACCGATTGTTATGATTGATGATTACGGGGTCGGTCAAAACTCAGCTAAAACTAAAACTCTTAAGCCCTTTGTTTTTTTAATCGAGAGCAGGAACATTAACTTGCTCTTTTTTTTTAACGAGTCATCTCCAACAGGCCGTCTTTATAAACAAAAGCAAGCAAAAAAACAAATAAGTTAGGTACGGTTAAGAGTCACTAATGTGTGCAGCACAAATCAACTGAACTTCATAGTACATAACAAAGTATAAATACAACCAGTAATGAATTATATGAAGTTCATATATTTGGTGCTTATTACACTTGGTGTAATAACCAATCTGTTCATTGTTCATTCTTTATAGTGGACATATATTTCTAATTTACTTTTACACCGCGAGAGAAACTATTACTTACCATTTTTAATTTTTTTTCGAAGGTCCGTAGAAGAAAGGAATCAAGGGATGTATAGCTCCTTCAACAATAAGCCCATATTCTTGAATTTATAGGCTTTGAATGGCCTTTCTTCTGAAGATGACATTTTAGAATAATAGGTCAATTGAAATTGTAATAATATATTGAAGACGTTATGCGTTATTTTTAAGTTTGTGCTTTGATGATACTAGCTAAATAGTTTGGATAATATGTAAACTTTGATGATACGTTTATGACGTATTATTATATAAAATATTAGTATATATATCTTTAA

mRNA sequence

ATGGAGTTGCATCTCAATGCAATGTTTGAACACACAATTGAGAAGCTGACACATGGTGTCTTAATTCCTAGAATATGTTACACAAACGGAGGCAGACCTCATCTAAAGAAGAGCATGGTTGTACCTACACTTATTAGGGCCAAATCTAAACTATCTTTTTTAGAGGAACTGAGACAATATTACTCTGATGCTGAATACGAAGATGAACATGGAGAAGGTATGAGCCTAGTAGAACTTTGGCAAGCTTCTTATAAGAAGGATGGAACCTTTATTGACGGCACAATAACTGAAGAGATGAGAATGCAAAGATGATAGTCAATGACAACACTGTTTTATAGGTTTTAGAATCCGTTCGCAGTGGCTAACCCTCCGGTATTATTTAAACCCTTTCACTTAGAATTTAAACCCTTTCGTATGGCTAACCCTTTCGCAGTGACAACACTGTTTTGTGCAAAGACACTGCACAAATAGCCTTGCGTATGGCTAACCCTCCGGTCCGTAGAAGAAAGGAATCAAGGGATGTATAGCTCCTTCAACAATAAGCCCATATTCTTGAATTTATAGGCTTTGAATGGCCTTTCTTCTGAAGATGACATTTTAGAATAATAGGTCAATTGAAATTGTAATAATATATTGAAGACGTTATGCGTTATTTTTAAGTTTGTGCTTTGATGATACTAGCTAAATAGTTTGGATAATATGTAAACTTTGATGATACGTTTATGACGTATTATTATATAAAATATTAGTATATATATCTTTAA

Coding sequence (CDS)

ATGGAGTTGCATCTCAATGCAATGTTTGAACACACAATTGAGAAGCTGACACATGGTGTCTTAATTCCTAGAATATGTTACACAAACGGAGGCAGACCTCATCTAAAGAAGAGCATGGTTGTACCTACACTTATTAGGGCCAAATCTAAACTATCTTTTTTAGAGGAACTGAGACAATATTACTCTGATGCTGAATACGAAGATGAACATGGAGAAGGTATGAGCCTAGTAGAACTTTGGCAAGCTTCTTATAAGAAGGATGGAACCTTTATTGACGGCACAATAACTGAAGAGATGAGAATGCAAAGATGA

Protein sequence

MELHLNAMFEHTIEKLTHGVLIPRICYTNGGRPHLKKSMVVPTLIRAKSKLSFLEELRQYYSDAEYEDEHGEGMSLVELWQASYKKDGTFIDGTITEEMRMQR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17015.1Spo17015.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17015.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17015.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17015.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17015.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0009553 embryo sac development
biological_process GO:0006812 cation transport
biological_process GO:0008033 tRNA processing
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0048868 pollen tube development
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0043167 ion binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression