Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTACTGCATGCTTCTTACATCACCATGCAGCCATCTCCAGCCCAGCTGCTGGTAGAGGCTCGGCCGCACAGCGATACCAGGCCGTAAGCATCAAGCCTAATCAGATCGTCTGCAAAGCTCAAAAGCAGGATGATAATGAGGCCAATGTTCTTAACAGTGGCGTCTCGAGGCGATTGGCCCTTACTGTTCTCATTGGTGCTGCTGCTGTTGGCTCTAAGGTTTCCCCTGCAGATGCAGCCTATGGAGAAGCTGGTAATTTTCAATAACAACTATAGTTGACACTTGAAGAGTCTCTTTCAATTACTATCTCCGTTTCAAAATGATTTTTACCGTTAATATTTGCACAAATATTAAGACTCCCTTAATAGGAAGAGGGTGCAAAAAAGCAAAAAAAGTGGTTGAATATAATATACGGACAAAGTAAGAAAATTTGAGTGGAAAGTTAAAAATGTGACGGGGTAAGAAGGGTAAGATAGTAAATTTTCATGTCAAAAAATAGTATAAAGAACATTGTAAAACGGGTTACAACAGAAAGTGTAAAGATCAATTTTGAAACAGAAGTAGTACATAGAGAGTATCAGACTAATGGTGTTATACTGCCATCAATCTTATCATGAGATGAACTTTTCTTACACAGATCCATCCATGATTTGCATGTATCAGACTAATGGTATTCATTCATATAGAAGGTTTCTACTGTATATGCACAACTAAAACACAAAATTGGTTGCAGTTTTCAGAAAAGCTGCCACTTAAAATGACATTGTACCAAACAAGAATTACAAAATTAAAGGGCTTGGTGGTTAGTCTCATTAATCAAGAATGACTATTAGAGTAAGAAGCTTTGATTCAGGAAAAAGTGCATCAGTAATTCTTAGTTCAAACAGAATACTAGATCTAATTCTTCACACCAAATGTAAGGCAACAGTACAGTCTGCAGAGTACTGAATTAATAGTAATTTTGGATTGCAGCTAATGTATTCGGGAAGCCAAAGAAAAACACCGAATTCATGCCCTACAACGGAGATGGATTCAAGTTGTTGGTACCTTCAAAATGGAACCCAAGCAAAGAGAAAGAGTTCCCTGGTCAAGTTTTGAGGTACGAGGACAACTTTGATGCCACCAGCAATTTATCTGTCCTGGTTCAACCCACTGACAAGAAATCCATCACAGACTTCGGTTCCCCTGAAGATTTCCTCTCCCAAGTAATACCACTTTCCTGCAACATCAAATTACTCTCTCCTTTTTCCACACCATTTCTCCATCTCTCTACCCGATTCTGAAAGGAACTAAATGTGTGCTTTTTTGTTACTACTACAGGTGGATTACTTGTTGGGTAAACAAGCCTACTTTGGAAAGACTGATTCTGAGGTAATCCTTTATCAATGCAGACTACAGCTTTGTTTATATCATTTATTTCCTAAGTTTCTTGATGGTGTGTTCTTAGTACATATTAATCAAGTCCTAATTTTCATGAAAGTTTCTCCAAGCAAAGCAGAAAATTGAGAACATTATAAAACATCTTATTTTCCCCAGATAACAAGTTCAATGACAAGGCTTAAACTATAAAAAAATATTTCCCAACATACATTTAACTCAGAAAACGATTTTGATTGCTTTCTGAATTCCATGCTAGTTTTTCGTGGACCAAAACAAACTATCAAATAGGACAAACCACATAGAAATTAAGTTTTATTTTGTAATCACTAATCACCAGCCACATAATAATAATAGAAAGGAACCCTAATTCTAAGCACTGTTTGGTAAATTTTGTGGGCAGGGTGGTTTCGATTCGGGTGTTGTTGCAAGTGCAAACGTCCTTGAAAGCAGCACCCCAGTAGTTGATGGGAAGCAATACTACAGCATTACTGTGCTAACAAGAACAGCAGATGGTGATGAGGGTGGAAAACACCAAGTAATTGCAGCGACTGTCAAGGACGGTAAGCTTTACATCTGCAAGGCTCAAGCTGGAGACAAGAGATGGTTCAAGGGTGCTAAGAAGTTTGTCGAGAGTGCTACCAGTTCTTTCAGTGTTGCTTAA ATGGCATCTACTGCATGCTTCTTACATCACCATGCAGCCATCTCCAGCCCAGCTGCTGGTAGAGGCTCGGCCGCACAGCGATACCAGGCCGTAAGCATCAAGCCTAATCAGATCGTCTGCAAAGCTCAAAAGCAGGATGATAATGAGGCCAATGTTCTTAACAGTGGCGTCTCGAGGCGATTGGCCCTTACTGTTCTCATTGGTGCTGCTGCTGTTGGCTCTAAGGTTTCCCCTGCAGATGCAGCCTATGGAGAAGCTGCTAATGTATTCGGGAAGCCAAAGAAAAACACCGAATTCATGCCCTACAACGGAGATGGATTCAAGTTGTTGGTACCTTCAAAATGGAACCCAAGCAAAGAGAAAGAGTTCCCTGGTCAAGTTTTGAGGTACGAGGACAACTTTGATGCCACCAGCAATTTATCTGTCCTGGTTCAACCCACTGACAAGAAATCCATCACAGACTTCGGTTCCCCTGAAGATTTCCTCTCCCAAGTGGATTACTTGTTGGGTAAACAAGCCTACTTTGGAAAGACTGATTCTGAGGGTGGTTTCGATTCGGGTGTTGTTGCAAGTGCAAACGTCCTTGAAAGCAGCACCCCAGTAGTTGATGGGAAGCAATACTACAGCATTACTGTGCTAACAAGAACAGCAGATGGTGATGAGGGTGGAAAACACCAAGTAATTGCAGCGACTGTCAAGGACGGTAAGCTTTACATCTGCAAGGCTCAAGCTGGAGACAAGAGATGGTTCAAGGGTGCTAAGAAGTTTGTCGAGAGTGCTACCAGTTCTTTCAGTGTTGCTTAA ATGGCATCTACTGCATGCTTCTTACATCACCATGCAGCCATCTCCAGCCCAGCTGCTGGTAGAGGCTCGGCCGCACAGCGATACCAGGCCGTAAGCATCAAGCCTAATCAGATCGTCTGCAAAGCTCAAAAGCAGGATGATAATGAGGCCAATGTTCTTAACAGTGGCGTCTCGAGGCGATTGGCCCTTACTGTTCTCATTGGTGCTGCTGCTGTTGGCTCTAAGGTTTCCCCTGCAGATGCAGCCTATGGAGAAGCTGCTAATGTATTCGGGAAGCCAAAGAAAAACACCGAATTCATGCCCTACAACGGAGATGGATTCAAGTTGTTGGTACCTTCAAAATGGAACCCAAGCAAAGAGAAAGAGTTCCCTGGTCAAGTTTTGAGGTACGAGGACAACTTTGATGCCACCAGCAATTTATCTGTCCTGGTTCAACCCACTGACAAGAAATCCATCACAGACTTCGGTTCCCCTGAAGATTTCCTCTCCCAAGTGGATTACTTGTTGGGTAAACAAGCCTACTTTGGAAAGACTGATTCTGAGGGTGGTTTCGATTCGGGTGTTGTTGCAAGTGCAAACGTCCTTGAAAGCAGCACCCCAGTAGTTGATGGGAAGCAATACTACAGCATTACTGTGCTAACAAGAACAGCAGATGGTGATGAGGGTGGAAAACACCAAGTAATTGCAGCGACTGTCAAGGACGGTAAGCTTTACATCTGCAAGGCTCAAGCTGGAGACAAGAGATGGTTCAAGGGTGCTAAGAAGTTTGTCGAGAGTGCTACCAGTTCTTTCAGTGTTGCTTAA MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESATSSFSVA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17046.1 vs. NCBI nr
Match: gi|131392|sp|P12302.1|PSBP_SPIOL (RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic; Short=OEE2; AltName: Full=23 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=23 kDa thylakoid membrane protein; AltName: Full=OEC 23 kDa subunit; Flags: Precursor) HSP 1 Score: 524.2 bits (1349), Expect = 1.300e-145 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Spo17046.1 vs. NCBI nr
Match: gi|731338098|ref|XP_010680144.1| (PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 468.4 bits (1204), Expect = 8.400e-129 Identity = 237/267 (88.76%), Postives = 256/267 (95.88%), Query Frame = 1
BLAST of Spo17046.1 vs. NCBI nr
Match: gi|197691941|dbj|BAG70022.1| (23 kDa precursor protein of the oxygen-evolving complex [Salicornia europaea]) HSP 1 Score: 458.8 bits (1179), Expect = 6.700e-126 Identity = 235/267 (88.01%), Postives = 248/267 (92.88%), Query Frame = 1
BLAST of Spo17046.1 vs. NCBI nr
Match: gi|747076702|ref|XP_011085433.1| (PREDICTED: oxygen-evolving enhancer protein 2-1, chloroplastic-like [Sesamum indicum]) HSP 1 Score: 414.1 bits (1063), Expect = 1.900e-112 Identity = 209/268 (77.99%), Postives = 237/268 (88.43%), Query Frame = 1
BLAST of Spo17046.1 vs. NCBI nr
Match: gi|356526942|ref|XP_003532074.1| (PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic [Glycine max]) HSP 1 Score: 412.5 bits (1059), Expect = 5.500e-112 Identity = 208/267 (77.90%), Postives = 235/267 (88.01%), Query Frame = 1
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R361_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111890 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 9.000e-146 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CA65_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132120 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 5.900e-129 Identity = 237/267 (88.76%), Postives = 256/267 (95.88%), Query Frame = 1
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Match: B5BT07_SALEU (23 kDa protein of the oxygen-evolving complex OS=Salicornia europaea GN=OEE2 PE=2 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 4.700e-126 Identity = 235/267 (88.01%), Postives = 248/267 (92.88%), Query Frame = 1
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Match: A0A0B2NW14_GLYSO (Oxygen-evolving enhancer protein 2, chloroplastic OS=Glycine soja GN=glysoja_006519 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.800e-112 Identity = 208/267 (77.90%), Postives = 235/267 (88.01%), Query Frame = 1
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Match: I1KXW9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G304200 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.800e-112 Identity = 208/267 (77.90%), Postives = 235/267 (88.01%), Query Frame = 1
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 8.100e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.000e-113 Identity = 210/267 (78.65%), Postives = 237/267 (88.76%), Query Frame = 1
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 5.100e-110 Identity = 200/266 (75.19%), Postives = 230/266 (86.47%), Query Frame = 1
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2) HSP 1 Score: 397.1 bits (1019), Expect = 1.500e-109 Identity = 201/268 (75.00%), Postives = 231/268 (86.19%), Query Frame = 1
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 2.800e-108 Identity = 197/266 (74.06%), Postives = 227/266 (85.34%), Query Frame = 1
BLAST of Spo17046.1 vs. TAIR (Arabidopsis)
Match: AT1G06680.1 (photosystem II subunit P-1) HSP 1 Score: 384.4 bits (986), Expect = 5.600e-107 Identity = 197/268 (73.51%), Postives = 232/268 (86.57%), Query Frame = 1
BLAST of Spo17046.1 vs. TAIR (Arabidopsis)
Match: AT2G30790.1 (photosystem II subunit P-2) HSP 1 Score: 198.7 bits (504), Expect = 4.400e-51 Identity = 94/125 (75.20%), Postives = 111/125 (88.80%), Query Frame = 1
BLAST of Spo17046.1 vs. TAIR (Arabidopsis)
Match: AT3G55330.1 (PsbP-like protein 1) HSP 1 Score: 49.3 bits (116), Expect = 4.300e-6 Identity = 57/235 (24.26%), Postives = 95/235 (40.43%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17046.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17046.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17046.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17046.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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