Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAGAGAACTGAGAAACGAGAAGAAAGAAAGAATGGCGCAGAACACAGGAATGTTATCCAGAGATCAGTTGCTTCACCTCTTCCATAGCTTCGCCTATCTCACTTCTCTCCCTCGTAATTCCACTCTTCCTATACCCTTAACACTTTCTCACTTTCTCTCTCTCTTTTTTTTTGTTTGTTTCTTCTAATAAACTGTCTAATTATTGAAAATTGGGATTCGTTGATCAGATGTTAAAAAACGTATAGCTGATGCTGTTCAAGATAATCAGGTTTCTCTCTCTATTCTTCTCACTAATTCTTGTATGTTTTTACTTTATCCCCGGTTTTTTTTTATTGGGAAAAGGGGTGCAATTTTGGATGGTTTTCATTGAAATTACTGTAAAACTGGGAACTTTTTTGAATAATAGAAGCTATTTGCTATACTTTATGTCATGCAATTATTAAATTTGTGGTATTACACCAGAAATTGGAGGTTTCTGGGTTATGTGTATTGGGAGTTTGAGTGATTAAACCTCTCTTTGCATCAATCCTCTGAAAGATGTGGTCAATGGTGGGTTTTTCTGGTTTATTCTTTTCATTACCAGTGAAATGAATTTCAGCCTTTCAGTTTTCCTGTGTACAATAGGTCACAGGTTCGATTCTCCCCTCCCCCATTTGAAATACGTGAATTGCGATGTCCCTGTGGCTCATTCGTACCGAAACAATTTTATTTTTTATTTTTATGAATCATGCATTCATTAATACTACAAATTTAGAAAGCTTCTTCTCAGATATCATCTAAAGGGCCTTCACTTATGATTTATTGCTTCAAAGTAGGTGTACATCATGACTTCATGAATATATTTGATTTGCACAATCTTCTTTCTTTATTGTTAGTTTTAGTTTGAAATACAAGTAGCTTACATAGTCATAACTAATGGATAATGATAATAAATTAGTAATTTTGGTTGCCACGATAGCTCCCAACTATGTTTGAGTGGAGTGGATTTGCATCCAAAATGGTCTTCAGTGACCATTTTGCAGTGTATTGTCATCCATGGTAATGTCATCAATATGTGGCCAATGCCCTGGTAAGGTAAGGTGTTAGGAAGGCTGAGCTATATCTCATTCATTTAGTTTTCATGTTGGCAGTAAATTTTTGCTCTCGTGTCCTATAAAGGTCATATGACTATTTCTTGACTTAACTTTCTCTTCGTCTTGCTGTGTTTAACTTTGCGCCTGTGTTGGCAATAAATGTTCTCTCCTGCCATATTAGGATCGTAGGACTATTTCGTGACTTAAGATTTATTAACATTTACCTTCAAGCCCTTAAGCTTCTGGACTGTGGATTGTAGCTTTTAAAATTGGTTCTATTGTGCCCAAATTGAGTTTGATCCCAATACCTATCCGGATGATCAATATGCTCCACAAGCAAACTTTAGAGGCTGTTTGGAAGTGAAGATTTTGCTAAGATGTGAACAGAATTTCTTAAGCATAGTTTGTTCTTCTATGGAGGCATGAAAACCTTGAGGCTGGTCGTATGAAGGCCTTATTGTCACGAGCCAATCTTAAGAGGCTTTTCCTTAATTCTTGAAGGGGCTTATTGGTGATATTTGTAGCCTTCATAACAGAGTCCATCAAGTTCATTTTAGAACTTTGAGCCTAGTTTCATATGAGGCTTGTTGTATAATGTGCAGGGAAGGACCTTCTTTAGAGATATTGGTGTGGTGTTGATGTATGCACCTAGTGTTCTAAGGAGTAATAGAAAACTACCCATTGCTTGATTTTGGAAACTTTTCTCTCTAAGGCCTTGAAGGTTCTTTTAGGTGTGATTTACGTCCTCATAATAGGAGGGTCATTCCAGGTCTGTCTTCCACTTGATTCCTATGTAGCCCCAGTGTTGTTGATTTTACTTGTGCTATCTTCTTTGTGACTTTAATTTGATTTTAATTTCGGGAGTTGCCTAAACATTGTCAATTTGACTTCGATCGTAGATGTTTATATTGTGTTGAATTTTAATAACATCAATAAATTGGTTTTTGTTCAAGAACCTCCTTGTCTGTTAGAAATCATTACCTTCAGATGCTGATCCAGTTGATATACCTAGCTCTCAACTGACTTTAAATCTACTCTAACTTGAAAATTTGCAGGAACCTGTTGCTGTGACAACTGCAATCCAAGAGGAGATATTCTTAGAAATGGGCGTCGGTTAGTGTGTTTTTATTTGTATATATATTTGTATTGTTAAAATCACGTATTGCTCATACTGAAAGGTTCTTGCGGTCTCAAATTATGTGTGACGTTGGCCTCCAAGGAGCTAACTGTGTCAATAAGGTTGCACTCTTATGCTATTACGATCCGTTGACCGATTGATTGATCTTGGAAGTGATCTACCAGAACAAAGGAATCGCTATATGGGTTCTGAGGATCCAGTCATTAAGAGTGTATTATTAGAATGGTTGTTGATATGAGCTCTATGCAGTGCCGTTTCACTTGGCTACTCCAATCTGTTACATAAGTTTTACGTGACAGTTATAGTCATGAACTTGCAAAGTTGCAAGCCCATATTGCTGATGGTAAAATTGGAGAACTGATCCCAAAGAAGGAAATAAAAAGTATTTAATATTTTGGCTTCTTGGTTGCAAATGCATTTAATTTTTCCACTCAAGCAAGTATTTTGACTTGTTGAGTTGATCGATGAAACGATGTAGTATATGGCACCGAGTCTTTCTCGAACGCTAGAAAAGTCATTGCTGCACAAAGTTTCAATTTTGGGTTAAAAAAAGGGACTAAATTAAATGTTTCATTTAATTATTATTTTTCCCAAAAGAATCTCCATTGAACTTAGTTACTTCTAATTTATATATTAACAGGCTCATGTATGCCTATTAGATCAGAAACATGCCTCTTTATAGGGGTAGGGCTTTTATTAGACTCTACATGTTTTTCCTTCAGTAGCAATCTTATGAGAGGCACTGGCATGGTTGTGCTAGTCAACATATTTTGTCCTGTCACATGAGTTGGCAGCCTCAGCGGTGTTGGGGTAGAACTTATTTATTCTTCTGTCTGGCGTTGGGCTTTATGCCTTTATGGGTGAGTGGACCTTGAAAAAAAGGGACGGGTGATGAAGATGGTTGTATTTTCAGTAGTAATGAAGGTCTTTTTTGAAGTTATTATATTTTCACAGTAGATGCAGTACGCTACTATCTTTTGTTTTCCACATTTCCTATTGGATTATCAAACTTCTTGATTGTCCTGGTTCAGTCTGTTTAGACTATGTCATATGTGCCTTATGCATTGTGTATGTGCCCTGAAATCCATAACATGGAAGCAGACATGTCTTCTATGTTCCATGTTGTGTACTGAGATAGAGTTCAATTTGAAAGTATTAGTTATTTTACTTGTGCCTGCTCTCTTCTCTTTGATATAGTTTCTGACTCTGTCTCAGGAAAAAATTATTATGCTATGAATTGAGAATGCTTGAATGACTTTATGGAATAGTGCAGATCCTAACTTTGGGATTGCTTGCCTGGGAAAAGTGAATATGGCGTACGAGAATGACCGGGATTTGATGATTCGCTTCTATGGATTTGTGGCTAAGTGCGTTTTCTGTCTATTTACTTCTCCATGTCATATGCACATCTAAATGTTGTTTTGTTCCCCCTTCCCCTGTAATCTTTTTTTTTTTTGATAGGAAAATCATTAATAAAAAGTCATACGACATCTACAAGAGAAATATAGATCTAACAAATACATGACCAATTGAATCAAATAAAGGTTCCTTCATCAAAACTACGGTCGCTGAATAGATCTTGCACTGTAGAACGTCTCCCGTATATAACGCTGGAACATGCAGCTTTTTCAGAGAGAGGGTCTAACGATTTGTTGTAGCCGCGAGGATGGTTTCCACTTGATTCATCTGAATGTACTCGAAAAATTGATATCTGTTGCGATTCCGTATAAAACTTCACCAACGAACCAATTTTACATAAATCCACTCCGAGTAAACGACAAACCAAACATACTAAAACTAACTCCACCATAGGGAGACTAACGAACAAGAACGAACTCCGTCCATATGGTGAAAATTTATTGAAATTGAGAGACAATAGCTGAATTAAATGAAGAGAAATGGTCGGAAATAGTCTAATTTCTTCGGAAATTAGACTATTTCCGGCCTACGACGGCCAAGAAAATAAACCCTAGAAAATGAGAGAGGGAGAGGGAAGGGGAAAGCGGCAAGTTTTTTTATTCCCCCTGTAATCTTATTTGTTCTTTAACAAAATACCCTTTGAGTAAGAACCTTGAACTTCAGGAGTGAAAGAAGAAAACCTTGCATGTTTTCTTTTAATTTCCCTCCAAGTGAAGCTGATTTCCTGTTATATGATTATAATACTAGTTAAGTAAACAGATCTGCTGATTATGATGTAGTATTTTAAAAGATGAAATGCTGGACATGGCAGCTTCTCTTTCTCTCTCTTTTTCCTTTTCCTCCTCTGTGGGATATGAGTATCATAACATACACGAGGCTAATCAAACAGTATATGAAGTCAAACTTACCTTTGCTTATATGCTTGCTCATAATTTCTCTCTGTTCTCCACTTTTCCCCTCTTGCATAAATGATACATGAGGGAAATCAAACAGTTACCTGTTTAGTCATTATGATTCCTAGCGTAGATGTTTCTTCTATGTTAGTGCCCATCCTACTGCAATGATACAAGCAATGCGCTATGAGTCTAGTTCTGGGGATTGATAAGGTGGAAATTTCAGGGAAGAGATGGCCTGTGATGAGGCTGAGCTTGGAACAGATGAATTTGCTAAAAAAATGCATGACCAGCATGATCTACACACACAGGTAGTATTCAATAAACACTTTCAATGGTTGTGACTCTTGTGAGGATTTTTGCTGAGTAGGGTCAGGTGAATTTTCTTGCAGCAATTAGAGATGTTAAAGTATATGCGTAAATTTCATGTGGATGACCAATCAGCTATTCTTGAAAAGGTATGTTTTTCTCCTTACCTCGGTTGTGATTAATTCGCTTTTGAACATAGCTGCTATTCTCTTCAAAAGAATTAGAGGTGCCACATGATTTTTCTTCTTGAATGAATATGCTTCTGATAATTAATTGAAATATGTACAACTGTCAGTGTAGAAATATTTTTATTCATTTGTGGACAAGGTCTTCCCTCCACGGGTGCTACAGCTTAGTGTTACTCACTTCGACACTAGATTACATTTTTATTTGGTTGATGTAGGTTTGAGAGGAAGGGCCAGAAGGAGGAAGTCTATGTCAAAAGTGGATTGTGTCCAAAATGGACACAAGTGGCTCTTATTGGTACTGATTAATTTGCTATTGGTCTACCAATACGTTACTAATTAGTACCAATAAGAGTCACTTTCGTTATTGGTACTGACATACTCTTTGTTAGTACTAAAATGGTTGTATTGGGTGATTTGTGTCCAATTTGGTCACAACCCACTTGACGTTTAGAAACCCTCAGGTTGGAGGCGGGGTTTGGGGGGGATGGGGAGAGATGACAGTGTCCGTGGATCGACACAAGGCTAGGGATGACAGTACAGCAGCAGCAGTGCGGCCCCATTACTCAAAAAACTATTGAGCATAACTCAAATCTACTATAGACTATGTTCTTTCCCCCTACGTGATCAAGTGTTCAACCCTTATAACTCATTAATAGTTCACCAGTGACTCTCAGAACATTAATTTGTTCACTTGTTTGCCTCGTATGGAGGTTGATTGTTTTCTGAAGCACTCTCCTTGTCGCATTATTTGTTTGCAGTTGCACGAGCAAATGCAGAATGCAGACTTCGGCAGCTGGGCATCTATCATGCCCGTGGAAGAAATTGAACAAGTTATTCGAGGAAGAACAATGCCAATAGCAAGACCAAACTAACATCTGCTTGAGAAGAATTTAAGCAAATTTCCACCAAATGTCTTTCAGCTCATTGCATTGCATCGCATCCTGTTTGGAACTTCCACTTGTGTATATTGAAGTATAAAACCATTGCATCCAGTTGCTTGGTGGTTGTATAATTGTAGTACTCCGCATGTATTAATCAAGATTCAAGAATTCATTTTCAGCTAAAAATGCGTCATGTGTGGACGTAATTTTAAAGAATTAAAAGAAATAAGTGGAAATAAGGTGAACATAACTGAGCCTTATTATAACTATGTATTTTGTAACTATCAATATCTAAGAGCAATATCACTCGTGGGGACAATTTTCCCCATTAGGAATTTTATTTGCTCAAAATCCATGATGAAATTTTTTTCATAT TAAGAGAGAACTGAGAAACGAGAAGAAAGAAAGAATGGCGCAGAACACAGGAATGTTATCCAGAGATCAGTTGCTTCACCTCTTCCATAGCTTCGCCTATCTCACTTCTCTCCCTCATGTTAAAAAACGTATAGCTGATGCTGTTCAAGATAATCAGGAACCTGTTGCTGTGACAACTGCAATCCAAGAGGAGATATTCTTAGAAATGGGCGTCGATCCTAACTTTGGGATTGCTTGCCTGGGAAAAGTGAATATGGCGTACGAGAATGACCGGGATTTGATGATTCGCTTCTATGGATTTGTGGCTAAGGAAGAGATGGCCTGTGATGAGGCTGAGCTTGGAACAGATGAATTTGCTAAAAAAATGCATGACCAGCATGATCTACACACACAGCAATTAGAGATGTTAAAGTATATGCGTAAATTTCATGTGGATGACCAATCAGCTATTCTTGAAAAGTTGCACGAGCAAATGCAGAATGCAGACTTCGGCAGCTGGGCATCTATCATGCCCGTGGAAGAAATTGAACAAGTTATTCGAGGAAGAACAATGCCAATAGCAAGACCAAACTAACATCTGCTTGAGAAGAATTTAAGCAAATTTCCACCAAATGTCTTTCAGCTCATTGCATTGCATCGCATCCTGTTTGGAACTTCCACTTGTGTATATTGAAGTATAAAACCATTGCATCCAGTTGCTTGGTGGTTGTATAATTGTAGTACTCCGCATGTATTAATCAAGATTCAAGAATTCATTTTCAGCTAAAAATGCGTCATGTGTGGACGTAATTTTAAAGAATTAAAAGAAATAAGTGGAAATAAGGTGAACATAACTGAGCCTTATTATAACTATGTATTTTGTAACTATCAATATCTAAGAGCAATATCACTCGTGGGGACAATTTTCCCCATTAGGAATTTTATTTGCTCAAAATCCATGATGAAATTTTTTTCATAT ATGGCGCAGAACACAGGAATGTTATCCAGAGATCAGTTGCTTCACCTCTTCCATAGCTTCGCCTATCTCACTTCTCTCCCTCATGTTAAAAAACGTATAGCTGATGCTGTTCAAGATAATCAGGAACCTGTTGCTGTGACAACTGCAATCCAAGAGGAGATATTCTTAGAAATGGGCGTCGATCCTAACTTTGGGATTGCTTGCCTGGGAAAAGTGAATATGGCGTACGAGAATGACCGGGATTTGATGATTCGCTTCTATGGATTTGTGGCTAAGGAAGAGATGGCCTGTGATGAGGCTGAGCTTGGAACAGATGAATTTGCTAAAAAAATGCATGACCAGCATGATCTACACACACAGCAATTAGAGATGTTAAAGTATATGCGTAAATTTCATGTGGATGACCAATCAGCTATTCTTGAAAAGTTGCACGAGCAAATGCAGAATGCAGACTTCGGCAGCTGGGCATCTATCATGCCCGTGGAAGAAATTGAACAAGTTATTCGAGGAAGAACAATGCCAATAGCAAGACCAAACTAA MAQNTGMLSRDQLLHLFHSFAYLTSLPHVKKRIADAVQDNQEPVAVTTAIQEEIFLEMGVDPNFGIACLGKVNMAYENDRDLMIRFYGFVAKEEMACDEAELGTDEFAKKMHDQHDLHTQQLEMLKYMRKFHVDDQSAILEKLHEQMQNADFGSWASIMPVEEIEQVIRGRTMPIARPN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17048.1 vs. NCBI nr
Match: gi|902202038|gb|KNA14155.1| (hypothetical protein SOVF_110120 [Spinacia oleracea]) HSP 1 Score: 362.5 bits (929), Expect = 4.400e-97 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo17048.1 vs. NCBI nr
Match: gi|731338092|ref|XP_010680141.1| (PREDICTED: uncharacterized protein LOC104895359 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 307.4 bits (786), Expect = 1.700e-80 Identity = 155/179 (86.59%), Postives = 163/179 (91.06%), Query Frame = 1
BLAST of Spo17048.1 vs. NCBI nr
Match: gi|225451455|ref|XP_002270017.1| (PREDICTED: uncharacterized protein LOC100265298 isoform X2 [Vitis vinifera]) HSP 1 Score: 255.0 bits (650), Expect = 9.800e-65 Identity = 124/177 (70.06%), Postives = 150/177 (84.75%), Query Frame = 1
BLAST of Spo17048.1 vs. NCBI nr
Match: gi|743926531|ref|XP_011007432.1| (PREDICTED: uncharacterized protein LOC105113103 [Populus euphratica]) HSP 1 Score: 251.1 bits (640), Expect = 1.400e-63 Identity = 124/176 (70.45%), Postives = 147/176 (83.52%), Query Frame = 1
BLAST of Spo17048.1 vs. NCBI nr
Match: gi|848853618|ref|XP_012844391.1| (PREDICTED: uncharacterized protein LOC105964425 [Erythranthe guttata]) HSP 1 Score: 250.4 bits (638), Expect = 2.400e-63 Identity = 121/176 (68.75%), Postives = 148/176 (84.09%), Query Frame = 1
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3S6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110120 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.000e-97 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5R6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132080 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.200e-80 Identity = 155/179 (86.59%), Postives = 163/179 (91.06%), Query Frame = 1
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Match: D7SVP7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01990 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.800e-65 Identity = 124/177 (70.06%), Postives = 150/177 (84.75%), Query Frame = 1
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Match: A0A022S0G6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014726mg PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.700e-63 Identity = 121/176 (68.75%), Postives = 148/176 (84.09%), Query Frame = 1
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Match: B9GJU6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33720g PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.200e-63 Identity = 123/176 (69.89%), Postives = 147/176 (83.52%), Query Frame = 1
BLAST of Spo17048.1 vs. TAIR (Arabidopsis)
Match: AT3G27050.1 (unknown protein) HSP 1 Score: 218.4 bits (555), Expect = 3.600e-57 Identity = 110/173 (63.58%), Postives = 136/173 (78.61%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17048.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17048.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17048.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17048.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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