Spo17135 (gene) | SpinachBase

Overview


Name	Spo17135
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L18, putative
Location	SpoScf_02037 : 88209 .. 91221 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTCTAGTTTAATAAAATTTGGTTTAGGGCCTAATTCAAAAGGTTACAAGCCTAAATCCATCCAAGTCCACCCATTATCTCAAACCCCTAACAACAAACCCACACAACCCATCAACAATTTGGATCCGATCCAACCCAAACCAAATGAAATACCACCAGCATCTCCACCCTACAACACCCACCAAAGCCCGTTTCCAAATATAAAAGCGCAAAAACCCTAGTTCATTTTTCTCTCTTGCCATTAGCATCTGCCGATTCCCGCACACCAGATCACCAGTTCCTTGCGCAACCATGGTAACTCTCCCTTTCTTTCTGTCTACTCCATTTCTTCACCTTCCACCCTCTTTCTCTCATCACAATTTGCTTGTTGTTGTGGTTTCAGGGTATTGATTTGAAGGCCGGAGGCAAGAGCAAGAAGACCAAGCGCACTGCGCCTAAATCCAACGATGTTTACCTAAAGCTACTTGTTAAGGTACAATTTTTAATACCCAGAAAATTTCTCAAAAACCTAGTTTTATTTTGTGTTAAATTTCAGTTTTTTCGATGTAATGTATGAATTTAAATGGTGAGTTGATCTGTTTTTTTTTTTTTTTGCAGCTTTACCGTTTTTTGGTTCGAAGAACTGGTAGCGGTTTCAATGCTGTGGTTTTGAAGAGGCTTTTTATGAGCAAGATTAACAAAGCCCCTCTTTCCCTCTCCAGACTTGTTAAGTATATGGAGGGCAAGGTATAAACTTTCTTTTTAAATATTGGTTTTATTTATTCGTGGCTTGAATTATCGGGGGTTTGATTCCGGCTAGAAAAATATATATTTGAAACATGATAAAAGAAGTCATAGTTTAAGCAATTTTATGTATCTCAAATGTAGTACGTACTTAGTTATGCCTGTAATATTCAAGTCCCAAGTGCGGTAGGAGTGATAAGTTGGTTACTAATGTGATCCCTATTCGGTTCTGAGTACGGTTTCAATCCCACAATGACCTGTCTGAAAACATGAGCCCAGTTCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAACAGTAACCAGAGGCAACTTTAAACTACTACTAGAGCCGTCGGCTACTGCTGTTGTTGCTGTATGGGGATTTTCAATAAGTGATTGGGGTTATTGAATTGAAATGTTTGTTGTGTAGGATGAGCAGACTGCAGTTTTGGTGGGAACTGTGACCGATGATATTAGGGTTTATGAGGTGCCTTCCATCAAGGTTTGTGCTTTGAGGTTCACTGAAACCGCCAGGGCTCGTATTGAGAAGGCCGGTGGCGAGTGTCTTACTTTCGATCAGTTGGCTTTGAGAGCTCCTCTTGGCCAGAACACGGTATAATTGCTTTTATCTAATTTATTTTGTTATTTTTGTTGCGCATATGTTTGTGTTTAGATGTTGCCATTTGAGTACTACTACATTGTTATGATGTGTATTTTCGGGACTCTAGTGTTTATACCTATTTTTGCAGCTGTATTTCTTTGCATTGACGCTGTGTTGTTTGGATTTTGATGTTGATTAGAAATTTGTTGAATTGCATGTATTGTTTATTTTGTGTGTGGCTATGGAGCTGGGTTGAGTATGTCTAAGGAGATGTTAATTATGCATAGGATCTGTGGTTATGTATGCAGGGGGTATGTTGAGGTGGGCTTATTTCCATCATAGATTATGAATTGTAGAGCTAAATTTTATCTGCTTCAACAAGGCTGCCCATAGCATACAGTATGTAAACATGACATGTCTCTTCTGTACTCCAAAAAGGTCCAAATATCTATTATATCTCCCTCTTTTTGTGAGATCATTGAAAATCATTTTCTTAAAGTCCAAATATCTATGGAAGTCTAATTTTGTGATATTGCCAAAACACCTCTTATTATCTTCAAGACTGATCTGATTGCCTTATCATTCATTTCAAAACTAGACTTTTTTGTCTGTTTATGATGATTATCTGATGTTTAATGTTATTTAATTATCATTAAATTGCCCTTTCCCTGCGTTTGTCTGAAATTGCCGTCCAATATTCCTTCTTAAGTGATGCTTGATATCAATAATGTAATGAAGTTCTCTGTACTATTTTTTTTAATATAATATCTGAGTTCTCCAATCTCTTGTTCAAGCTTCTTGTGTGAATTACCTTGCCCTGTATGATAGAGCTTACTGCCTCCACTCTTTCCCTTTACCTGCCTTGGAGTCAAATGAGTGATAACTTGGCAAACATGATGCTTGCATGCTTTTGGTACATACGTGTGTCAAAAGGGATGAATGTGATCTGAATTTGAATTAAGAGATTTTGGTTAGTGAGGACATTTATACAAGTGTAGTTTTCTTCAATATGAGTGAGGCATTGTTTAACTTTTTGACTATGGAATTCCGGCAGGTGTTGCTTAGGGGTCCTAAGAATGCTAGAGAGGCTGTCAAGCACTTTGGCAAAGCTCCTGGTGTTCCTGGCAGTCACACCAAGCCTTATGTCCGATCTACTGGCAGGAAGTTCGAGAAGGCTAGAGGTAGACGTAACAGCCGTGGTTACAGAAATTAAGTCAAGTTTCAAGATAGAAGAGCTAATTCATCTCTGTTTAAGACTTTTGTCAATCGATATACACTATTTCGTTTTGTGTGTTGGTTTTCCTTCATATTAGCAAAGCATATTATTAGTTATAGCAGATTTTACCCCGACTTTAATGTTATCATCAGTTTTGGAGGTAAATTTTGTTGAAGAGATTGCTATATCTGTGTTGCTTTTGCTTAAGAATGCCGCTTAGAAGAAAATTTCGATTGAAACATGACCCTTATTTAAGGAAGTTCTTCTATTTGTATTCTCAGTCTTCAAGTATGGTTTATCGCAGTTGTGTTTTTTATTGATAGCTCTTAATCGCTTTTATAGTTTCAGAGGAAAGTTTTGGCTAATTGTTGTTAGCTCTTAATTTCAGCCGTGGAATGTTGGGTTATAAGTCTATGACTTGTAATAAGAGAAGCCAGTTTTATGAATCCGGGCATCGGTGC

mRNA sequence

GGTTTCTAGTTTAATAAAATTTGGTTTAGGGCCTAATTCAAAAGGTTACAAGCCTAAATCCATCCAAGTCCACCCATTATCTCAAACCCCTAACAACAAACCCACACAACCCATCAACAATTTGGATCCGATCCAACCCAAACCAAATGAAATACCACCAGCATCTCCACCCTACAACACCCACCAAAGCCCGTTTCCAAATATAAAAGCGCAAAAACCCTAGTTCATTTTTCTCTCTTGCCATTAGCATCTGCCGATTCCCGCACACCAGATCACCAGTTCCTTGCGCAACCATGGGTATTGATTTGAAGGCCGGAGGCAAGAGCAAGAAGACCAAGCGCACTGCGCCTAAATCCAACGATGTTTACCTAAAGCTACTTGTTAAGCTTTACCGTTTTTTGGTTCGAAGAACTGGTAGCGGTTTCAATGCTGTGGTTTTGAAGAGGCTTTTTATGAGCAAGATTAACAAAGCCCCTCTTTCCCTCTCCAGACTTGTTAAGTATATGGAGGGCAAGGATGAGCAGACTGCAGTTTTGGTGGGAACTGTGACCGATGATATTAGGGTTTATGAGGTGCCTTCCATCAAGGTTTGTGCTTTGAGGTTCACTGAAACCGCCAGGGCTCGTATTGAGAAGGCCGGTGGCGAGTGTCTTACTTTCGATCAGTTGGCTTTGAGAGCTCCTCTTGGCCAGAACACGGTGTTGCTTAGGGGTCCTAAGAATGCTAGAGAGGCTGTCAAGCACTTTGGCAAAGCTCCTGGTGTTCCTGGCAGTCACACCAAGCCTTATGTCCGATCTACTGGCAGGAAGTTCGAGAAGGCTAGAGGTAGACGTAACAGCCGTGGTTACAGAAATTAAGTCAAGTTTCAAGATAGAAGAGCTAATTCATCTCTGTTTAAGACTTTTGTCAATCGATATACACTATTTCGTTTTGTGTGTTGGTTTTCCTTCATATTAGCAAAGCATATTATTAGTTATAGCAGATTTTACCCCGACTTTAATGTTATCATCAGTTTTGGAGGTAAATTTTGTTGAAGAGATTGCTATATCTGTGTTGCTTTTGCTTAAGAATGCCGCTTAGAAGAAAATTTCGATTGAAACATGACCCTTATTTAAGGAAGTTCTTCTATTTGTATTCTCAGTCTTCAAGTATGGTTTATCGCAGTTGTGTTTTTTATTGATAGCTCTTAATCGCTTTTATAGTTTCAGAGGAAAGTTTTGGCTAATTGTTGTTAGCTCTTAATTTCAGCCGTGGAATGTTGGGTTATAAGTCTATGACTTGTAATAAGAGAAGCCAGTTTTATGAATCCGGGCATCGGTGC

Coding sequence (CDS)

ATGGGTATTGATTTGAAGGCCGGAGGCAAGAGCAAGAAGACCAAGCGCACTGCGCCTAAATCCAACGATGTTTACCTAAAGCTACTTGTTAAGCTTTACCGTTTTTTGGTTCGAAGAACTGGTAGCGGTTTCAATGCTGTGGTTTTGAAGAGGCTTTTTATGAGCAAGATTAACAAAGCCCCTCTTTCCCTCTCCAGACTTGTTAAGTATATGGAGGGCAAGGATGAGCAGACTGCAGTTTTGGTGGGAACTGTGACCGATGATATTAGGGTTTATGAGGTGCCTTCCATCAAGGTTTGTGCTTTGAGGTTCACTGAAACCGCCAGGGCTCGTATTGAGAAGGCCGGTGGCGAGTGTCTTACTTTCGATCAGTTGGCTTTGAGAGCTCCTCTTGGCCAGAACACGGTGTTGCTTAGGGGTCCTAAGAATGCTAGAGAGGCTGTCAAGCACTTTGGCAAAGCTCCTGGTGTTCCTGGCAGTCACACCAAGCCTTATGTCCGATCTACTGGCAGGAAGTTCGAGAAGGCTAGAGGTAGACGTAACAGCCGTGGTTACAGAAATTAA

Protein sequence

MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKAPLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRRNSRGYRN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17135.1	Spo17135.1	mRNA

Homology

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BLAST of Spo17135.1 vs. NCBI nr
Match: gi|902226296|gb|KNA20321.1| (hypothetical protein SOVF_053110 [Spinacia oleracea])

HSP 1 Score: 363.6 bits (932), Expect = 2.000e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180

Query: 181 NSRGYRN 188
           NSRGYRN
Sbjct: 181 NSRGYRN 187

[Close]

BLAST of Spo17135.1 vs. NCBI nr
Match: gi|902187081|gb|KNA10844.1| (hypothetical protein SOVF_140570 [Spinacia oleracea])

HSP 1 Score: 354.8 bits (909), Expect = 9.500e-95
Identity = 182/187 (97.33%), Postives = 185/187 (98.93%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FNAVVLKRLFMSK NKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSDFNAVVLKRLFMSKTNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV+YM+GKDE+TAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLVEYMQGKDEKTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180

Query: 181 NSRGYRN 188
           NSRGYRN
Sbjct: 181 NSRGYRN 187

[Close]

BLAST of Spo17135.1 vs. NCBI nr
Match: gi|731346235|ref|XP_010684349.1| (PREDICTED: 60S ribosomal protein L18-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 341.3 bits (874), Expect = 1.100e-90
Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FNAVVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSKFNAVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLVKYMEGKD + AVLVGT+TDDIRVYEVP++KVCALRFTETARARIEKAGGEC+
Sbjct: 61  PLSLSRLVKYMEGKDGRIAVLVGTITDDIRVYEVPTMKVCALRFTETARARIEKAGGECI 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVP SHTKPYVR+ GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRANGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRGYR
Sbjct: 181 NSRGYR 186

[Close]

BLAST of Spo17135.1 vs. NCBI nr
Match: gi|731326547|ref|XP_010674074.1| (PREDICTED: 60S ribosomal protein L18-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 331.3 bits (848), Expect = 1.100e-87
Identity = 168/186 (90.32%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FN VVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSSFNGVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRL+ YM+GK+++ AV+VG VTDDIRVYEVP++KV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLITYMKGKEDKIAVIVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVP SHTKPYVR+ GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRANGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRGYR
Sbjct: 181 NSRGYR 186

[Close]

BLAST of Spo17135.1 vs. NCBI nr
Match: gi|965608593|dbj|BAT95084.1| (hypothetical protein VIGAN_08174700 [Vigna angularis var. angularis])

HSP 1 Score: 329.3 bits (843), Expect = 4.300e-87
Identity = 166/186 (89.25%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSND+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK+NKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRL+KY +GK+++ AV+VGTVTDDIRVYEVP +KV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIKYTKGKEDRIAVVVGTVTDDIRVYEVPPLKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFG APGVP SHTKPYVRS GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRG+R
Sbjct: 181 NSRGFR 186

[Close]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLB8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_053110 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.400e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180

Query: 181 NSRGYRN 188
           NSRGYRN
Sbjct: 181 NSRGYRN 187

[Close]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUA3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140570 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.600e-95
Identity = 182/187 (97.33%), Postives = 185/187 (98.93%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FNAVVLKRLFMSK NKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSDFNAVVLKRLFMSKTNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV+YM+GKDE+TAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLVEYMQGKDEKTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180

Query: 181 NSRGYRN 188
           NSRGYRN
Sbjct: 181 NSRGYRN 187

[Close]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1K4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163580 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.600e-91
Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FNAVVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSKFNAVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLVKYMEGKD + AVLVGT+TDDIRVYEVP++KVCALRFTETARARIEKAGGEC+
Sbjct: 61  PLSLSRLVKYMEGKDGRIAVLVGTITDDIRVYEVPTMKVCALRFTETARARIEKAGGECI 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVP SHTKPYVR+ GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRANGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRGYR
Sbjct: 181 NSRGYR 186

[Close]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FEI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076000 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.800e-88
Identity = 168/186 (90.32%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGS FN VVLKRLFMSKINKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSSFNGVVLKRLFMSKINKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRL+ YM+GK+++ AV+VG VTDDIRVYEVP++KV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLITYMKGKEDKIAVIVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVP SHTKPYVR+ GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRANGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRGYR
Sbjct: 181 NSRGYR 186

[Close]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SQE8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G174700 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.000e-87
Identity = 166/186 (89.25%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDLKAGGKSKKTKRTAPKSND+YLKLLVKLYRFLVRRTGS FNAV+LKRLFMSK+NKA
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRL+KY +GK+++ AV+VGTVTDDIRVYEVP +KV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIKYTKGKEDRIAVVVGTVTDDIRVYEVPPLKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFG APGVP SHTKPYVRS GRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 181 NSRGYR 187
           NSRG+R
Sbjct: 181 NSRGFR 186

[Close]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 8.300e-83
Identity = 155/186 (83.33%), Postives = 174/186 (93.55%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDL AGGKSKKTKRTAPKS+DVYLKLLVKLYRFLVRR+ S FNAV+LKRLFMSK+NKA
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV++M GKD++ AVLVGT+TDD+RV+E+P++KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFG APGVP S+TKPYVR  GRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYR 187
            SRG++
Sbjct: 181 KSRGFK 186

[Close]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 4.100e-82
Identity = 153/186 (82.26%), Postives = 173/186 (93.01%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDL AGGKSKKTKRTAPKS+DVYLKL VKLYRFLVRRT S FN V+LKRLFMSK+NKA
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV++M GK+++ AVLVGT+TDD+RV+E+P++KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFG APGVP SH+KPYVR+ GRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYR 187
            SRG++
Sbjct: 181 KSRGFK 186

[Close]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.900e-79
Identity = 151/183 (82.51%), Postives = 168/183 (91.80%), Query Frame = 1

		  
Query: 4   DLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKAPLS 63
           DLKAGGK+KKTKRT+PKSND+YLKLLVKLYRFLVRRT S FNAV+LKRLFMSK+N+ PLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECLTFD 123
           LSRL+KYM+GK+ +  V+VG VTDDIRVY+VP+IKV AL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRRNSR 183
           QLALR PL  +TVLLRGPKNAREAVKHFG APGVP SHTKPYVRS GRKFEKARGRR SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GYR 187
           G+R
Sbjct: 181 GFR 182

[Close]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3)

HSP 1 Score: 280.4 bits (716), Expect = 1.400e-74
Identity = 145/187 (77.54%), Postives = 163/187 (87.17%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDL AGGKSKKTKRT PKS+DVYLKLLVK  R+LVRRT S FNAV+LKRLFMSK+NKA
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV+YM+GKD + AV+VGTVTDD+R+ +VP++ V ALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGR 180
           TFDQLAL  P   +NTVLLRGPKN REAVKHFG APGVP SHTKPYVR TG+K E ARGR
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGYR 187
           R SRG++
Sbjct: 181 RRSRGFK 187

[Close]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Match: RL18_MOUSE (60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=1 SV=3)

HSP 1 Score: 243.4 bits (620), Expect = 1.900e-63
Identity = 123/189 (65.08%), Postives = 152/189 (80.42%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MG+D++   K +K +R  PKS D+YL+LLVKLYRFL RRT S FN VVLKRLFMS+ N+ 
Sbjct: 1   MGVDIRHN-KDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 60

Query: 61  PLSLSRLVKYME--GKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGE 120
           PLSLSR+++ M+  G++ +TAV+VGTVTDD+R+ EVP +KVCALR +  AR+RI KAGG+
Sbjct: 61  PLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARG 180
            LTFDQLAL +P G+ TVLL GP+  RE  +HFGKAPG P SHTKPYVRS GRKFE+ARG
Sbjct: 121 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 180

Query: 181 RRNSRGYRN 188
           RR SRGY+N
Sbjct: 181 RRASRGYKN 188

[Close]

BLAST of Spo17135.1 vs. TAIR (Arabidopsis)
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 4.700e-84
Identity = 155/186 (83.33%), Postives = 174/186 (93.55%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDL AGGKSKKTKRTAPKS+DVYLKLLVKLYRFLVRR+ S FNAV+LKRLFMSK+NKA
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV++M GKD++ AVLVGT+TDD+RV+E+P++KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFG APGVP S+TKPYVR  GRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYR 187
            SRG++
Sbjct: 181 KSRGFK 186

[Close]

BLAST of Spo17135.1 vs. TAIR (Arabidopsis)
Match: AT3G05590.1 (ribosomal protein L18)

HSP 1 Score: 305.4 bits (781), Expect = 2.300e-83
Identity = 153/186 (82.26%), Postives = 173/186 (93.01%), Query Frame = 1

		  
Query: 1   MGIDLKAGGKSKKTKRTAPKSNDVYLKLLVKLYRFLVRRTGSGFNAVVLKRLFMSKINKA 60
           MGIDL AGGKSKKTKRTAPKS+DVYLKL VKLYRFLVRRT S FN V+LKRLFMSK+NKA
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIEKAGGECL 120
           PLSLSRLV++M GK+++ AVLVGT+TDD+RV+E+P++KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRKFEKARGRR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFG APGVP SH+KPYVR+ GRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYR 187
            SRG++
Sbjct: 181 KSRGFK 186

[Close]

BLAST of Spo17135.1 vs. TAIR (Arabidopsis)
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 8.100e-52
Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 1

		  
Query: 54  MSKINKAPLSLSRLVKYMEGKDEQTAVLVGTVTDDIRVYEVPSIKVCALRFTETARARIE 113
           MSK+NKAPLSLSRLV+YM+GKD + AV+VGTVTDD+R+ +VP++ V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGKAPGVPGSHTKPYVRSTGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRGPKN REAVKHFG APGVP SHTKPYVR TG+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FEKARGRRNSRGYR 187
            E ARGRR SRG++
Sbjct: 121 IEIARGRRRSRGFK 134

The following BLAST results are available for this feature:

BLAST of Spo17135.1 vs. NCBI nr
BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
BLAST of Spo17135.1 vs. TAIR (Arabidopsis)

BLAST of Spo17135.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902226296\|gb\|KNA20321.1\|	2.0e-97	100.	hypothetical protein SOVF_0531...	[more]
gi\|902187081\|gb\|KNA10844.1\|	9.5e-95	97.3	hypothetical protein SOVF_1405...	[more]
gi\|731346235\|ref\|XP_010684349.1\|	1.1e-90	93.5	PREDICTED: 60S ribosomal prote...	[more]
gi\|731326547\|ref\|XP_010674074.1\|	1.1e-87	90.3	PREDICTED: 60S ribosomal prote...	[more]
gi\|965608593\|dbj\|BAT95084.1\|	4.3e-87	89.2	hypothetical protein VIGAN_081...	[more]

BLAST of Spo17135.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RLB8_SPIOL	1.4e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QUA3_SPIOL	6.6e-95	97.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8C1K4_BETVU	7.6e-91	93.5	Uncharacterized protein OS=Bet...	[more]
A0A0J8FEI6_BETVU	7.8e-88	90.3	Uncharacterized protein OS=Bet...	[more]
A0A0S3SQE8_PHAAN	3.0e-87	89.2	Uncharacterized protein OS=Vig...	[more]

BLAST of Spo17135.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RL183_ARATH	8.3e-83	83.3	60S ribosomal protein L18-3 OS...	[more]
RL182_ARATH	4.1e-82	82.2	60S ribosomal protein L18-2 OS...	[more]
RL18_CICAR	1.9e-79	82.5	60S ribosomal protein L18 (Fra...	[more]
RL181_ARATH	1.4e-74	77.5	Putative 60S ribosomal protein...	[more]
RL18_MOUSE	1.9e-63	65.0	60S ribosomal protein L18 OS=M...	[more]

BLAST of Spo17135.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G27850.1	4.7e-84	83.3	Ribosomal protein L18e/L15 sup...	[more]
AT3G05590.1	2.3e-83	82.2	ribosomal protein L18	[more]
AT2G47570.1	8.1e-52	75.3	Ribosomal protein L18e/L15 sup...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 2..187 score: 8.7E
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 2..186 score: 3.3
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 20..139 score: 8.11
None	No IPR available	GENE3D	3.100.10.10		coord: 20..139 score: 1.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009750	response to fructose
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0006412	translation
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0008152	metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0048825	cotyledon development
biological_process	GO:0051301	cell division
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0032259	methylation
biological_process	GO:0009821	alkaloid biosynthetic process
biological_process	GO:0007033	vacuole organization
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0009451	RNA modification
biological_process	GO:0006396	RNA processing
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006177	GMP biosynthetic process
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006529	asparagine biosynthetic process
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0019750	chloroplast localization
biological_process	GO:0009250	glucan biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0009409	response to cold
biological_process	GO:0009987	cellular process
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0006996	organelle organization
biological_process	GO:0006102	isocitrate metabolic process
biological_process	GO:0006434	seryl-tRNA aminoacylation
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006739	NADP metabolic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0019643	reductive tricarboxylic acid cycle
biological_process	GO:0051049	regulation of transport
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0071702	organic substance transport
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006414	translational elongation
biological_process	GO:0015031	protein transport
biological_process	GO:0010048	vernalization response
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0050826	response to freezing
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0016571	histone methylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0019915	lipid storage
biological_process	GO:0006833	water transport
biological_process	GO:0006544	glycine metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0010319	stromule
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0009536	plastid
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008266	poly(U) RNA binding
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0030750	putrescine N-methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004828	serine-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004450	isocitrate dehydrogenase (NADP+) activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0008235	metalloexopeptidase activity
molecular_function	GO:0004177	aminopeptidase activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016462	pyrophosphatase activity
molecular_function	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0043169	cation binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0046982	protein heterodimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo03708	0.86	Barchart \| Table
Spo13731	0.83	Barchart \| Table
Spo05607	0.79	Barchart \| Table
Spo26636	0.79	Barchart \| Table
Spo19401	0.79	Barchart \| Table
Spo13107	0.79	Barchart \| Table
Spo00170	0.78	Barchart \| Table
Spo06168	0.78	Barchart \| Table
Spo17124	0.78	Barchart \| Table
Spo15363	0.77	Barchart \| Table
Spo17219	0.77	Barchart \| Table
Spo18111	0.77	Barchart \| Table
Spo00081	0.76	Barchart \| Table
Spo05546	0.76	Barchart \| Table
Spo27210	0.76	Barchart \| Table
Spo23133	0.76	Barchart \| Table
Spo25915	0.75	Barchart \| Table
Spo21531	0.75	Barchart \| Table
Spo17110	0.74	Barchart \| Table
Spo15302	0.73	Barchart \| Table
Spo15517	0.73	Barchart \| Table
Spo00501	0.73	Barchart \| Table
Spo08589	0.73	Barchart \| Table
Spo22326	0.73	Barchart \| Table
Spo14013	0.73	Barchart \| Table
Spo05547	0.72	Barchart \| Table
Spo09803	0.72	Barchart \| Table
Spo00780	0.72	Barchart \| Table
Spo12391	0.72	Barchart \| Table
Spo17929	0.72	Barchart \| Table
Spo01970	0.72	Barchart \| Table
Spo02189	0.72	Barchart \| Table
Spo21027	0.71	Barchart \| Table
Spo07794	0.71	Barchart \| Table
Spo19325	0.71	Barchart \| Table
Spo18942	0.71	Barchart \| Table
Spo08451	0.71	Barchart \| Table
Spo22654	0.71	Barchart \| Table
Spo18304	0.71	Barchart \| Table
Spo15422	0.71	Barchart \| Table
Spo02272	0.70	Barchart \| Table
Spo18103	0.70	Barchart \| Table
Spo06172	0.70	Barchart \| Table
Spo25615	0.70	Barchart \| Table
Spo24475	0.70	Barchart \| Table
Spo23922	0.70	Barchart \| Table
Spo21768	0.70	Barchart \| Table
Spo23710	0.69	Barchart \| Table
Spo11015	0.69	Barchart \| Table
Spo26803	0.69	Barchart \| Table
Spo00854	0.69	Barchart \| Table
Spo02181	0.69	Barchart \| Table
Spo09267	0.69	Barchart \| Table
Spo18620	0.69	Barchart \| Table
Spo24595	0.69	Barchart \| Table
Spo00566	0.69	Barchart \| Table
Spo07928	0.69	Barchart \| Table
Spo06487	0.69	Barchart \| Table
Spo25694	0.69	Barchart \| Table
Spo05484	0.69	Barchart \| Table
Spo25938	0.69	Barchart \| Table
Spo01437	0.69	Barchart \| Table
Spo18434	0.68	Barchart \| Table
Spo00155	0.68	Barchart \| Table
Spo02001	0.68	Barchart \| Table
Spo02706	0.68	Barchart \| Table
Spo03027	0.68	Barchart \| Table
Spo03047	0.68	Barchart \| Table
Spo06287	0.68	Barchart \| Table
Spo10624	0.68	Barchart \| Table
Spo10705	0.68	Barchart \| Table
Spo10736	0.68	Barchart \| Table
Spo11073	0.68	Barchart \| Table
Spo12809	0.68	Barchart \| Table
Spo13626	0.68	Barchart \| Table
Spo15087	0.68	Barchart \| Table
Spo15620	0.68	Barchart \| Table
Spo16627	0.68	Barchart \| Table
Spo19833	0.68	Barchart \| Table
Spo20295	0.68	Barchart \| Table
Spo22201	0.68	Barchart \| Table
Spo25913	0.68	Barchart \| Table
Spo28098	0.68	Barchart \| Table
Spo14159	0.67	Barchart \| Table
Spo19439	0.67	Barchart \| Table
Spo22006	0.67	Barchart \| Table
Spo00391	0.67	Barchart \| Table
Spo27346	0.67	Barchart \| Table
Spo24414	0.67	Barchart \| Table
Spo11951	0.67	Barchart \| Table
Spo19761	0.67	Barchart \| Table
Spo25593	0.67	Barchart \| Table
Spo17887	0.67	Barchart \| Table
Spo14310	0.67	Barchart \| Table
Spo11911	0.67	Barchart \| Table
Spo23218	0.66	Barchart \| Table
Spo11519	0.66	Barchart \| Table
Spo26851	0.66	Barchart \| Table
Spo20806	0.66	Barchart \| Table
Spo09714	0.66	Barchart \| Table
Spo09493	0.66	Barchart \| Table
Spo07955	0.66	Barchart \| Table
Spo06501	0.66	Barchart \| Table
Spo25671	0.66	Barchart \| Table
Spo06444	0.66	Barchart \| Table
Spo25672	0.66	Barchart \| Table
Spo05863	0.66	Barchart \| Table
Spo04453	0.66	Barchart \| Table
Spo25949	0.66	Barchart \| Table
Spo18070	0.66	Barchart \| Table
Spo00076	0.66	Barchart \| Table
Spo17803	0.66	Barchart \| Table
Spo16106	0.66	Barchart \| Table
Spo21501	0.66	Barchart \| Table
Spo19500	0.66	Barchart \| Table
Spo01171	0.66	Barchart \| Table
Spo20161	0.66	Barchart \| Table
Spo17496	0.65	Barchart \| Table
Spo21071	0.65	Barchart \| Table
Spo13707	0.65	Barchart \| Table
Spo12598	0.65	Barchart \| Table
Spo22869	0.65	Barchart \| Table
Spo22961	0.65	Barchart \| Table
Spo23122	0.65	Barchart \| Table
Spo23832	0.65	Barchart \| Table
Spo23889	0.65	Barchart \| Table
Spo02221	0.65	Barchart \| Table
Spo16817	0.65	Barchart \| Table