Spo17383 (gene) | SpinachBase

Overview


Name	Spo17383
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RING/U-box superfamily protein, putative
Location	SpoScf_01767 : 49888 .. 50742 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACCAATCTACAACAACAACAACAGAATCAATGATCATGGCTGCCCTCTCTACACTCACCTCTTCTCAACTAACCTCACTCTCCGCCTCCCTCTCGGCCGCCTTCCGCCGCCACAACCACCACCTCGCATCGCTCCTCACTTCCCCCACCCTCTTTGCTCACACCCTCAACCACCTCTACTCCCTTTCACTCTCTGAAAAATCCCTCCTCATCGCTCGCCACCTCCTCTCCTTCCTCCACCTCCTTACACCCTTCTTATTCCCTCTGTCGTCGTCATCACCTGTGTATATACCCTCCTCCAACAGGGTTCGACTTCGTGATCTCGATTCCGTCTTGTTACTCTTATTCTTCTGTGAAGTTCGTCAGCACCAGCCGACAATTCTGGAGAACGTATCCCCTGCACGCTGGCAGGGGATACTGAAAACGTATGGCTCTGATACCATATTAGGTAACCTATACACAGGGTTCGCATTATCCCTATCTCCCTACCAAGTGTTGGGGGCTCTAGTAGACCTGGTAGTAAAGTGCAGGAGGTTTGTCGGTTCGAAAGGGTGTGATGGCGTTGAGGCGGGGAAGGAGGTAGCGGCATCCGTGGACGCGGTGGTGGCGTTGCCGTCAGTCGAGAGTGGTGGTGGGGTAGAGTGTGTGATATGCAAAGAGGAGATGAGTCAAGGGAGGGATGTGTGTGAACTTCCATGTCAACACAAATTCCATTGGAAGTGTGTGTTGCCTTGGCTTAGCAAAAGAAACACATGTCCTTGTTGTAGGTTCCTGCTGCCGACGGATGACGTCTACGGCGAGATCCAACGGTTGTGGGATGCCATTGTTAAACTTGGTCTGCAGATATAA

mRNA sequence

ATGGCAGACCAATCTACAACAACAACAACAGAATCAATGATCATGGCTGCCCTCTCTACACTCACCTCTTCTCAACTAACCTCACTCTCCGCCTCCCTCTCGGCCGCCTTCCGCCGCCACAACCACCACCTCGCATCGCTCCTCACTTCCCCCACCCTCTTTGCTCACACCCTCAACCACCTCTACTCCCTTTCACTCTCTGAAAAATCCCTCCTCATCGCTCGCCACCTCCTCTCCTTCCTCCACCTCCTTACACCCTTCTTATTCCCTCTGTCGTCGTCATCACCTGTGTATATACCCTCCTCCAACAGGGTTCGACTTCGTGATCTCGATTCCGTCTTGTTACTCTTATTCTTCTGTGAAGTTCGTCAGCACCAGCCGACAATTCTGGAGAACGTATCCCCTGCACGCTGGCAGGGGATACTGAAAACGTATGGCTCTGATACCATATTAGGTAACCTATACACAGGGTTCGCATTATCCCTATCTCCCTACCAAGTGTTGGGGGCTCTAGTAGACCTGGTAGTAAAGTGCAGGAGGTTTGTCGGTTCGAAAGGGTGTGATGGCGTTGAGGCGGGGAAGGAGGTAGCGGCATCCGTGGACGCGGTGGTGGCGTTGCCGTCAGTCGAGAGTGGTGGTGGGGTAGAGTGTGTGATATGCAAAGAGGAGATGAGTCAAGGGAGGGATGTGTGTGAACTTCCATGTCAACACAAATTCCATTGGAAGTGTGTGTTGCCTTGGCTTAGCAAAAGAAACACATGTCCTTGTTGTAGGTTCCTGCTGCCGACGGATGACGTCTACGGCGAGATCCAACGGTTGTGGGATGCCATTGTTAAACTTGGTCTGCAGATATAA

Coding sequence (CDS)

ATGGCAGACCAATCTACAACAACAACAACAGAATCAATGATCATGGCTGCCCTCTCTACACTCACCTCTTCTCAACTAACCTCACTCTCCGCCTCCCTCTCGGCCGCCTTCCGCCGCCACAACCACCACCTCGCATCGCTCCTCACTTCCCCCACCCTCTTTGCTCACACCCTCAACCACCTCTACTCCCTTTCACTCTCTGAAAAATCCCTCCTCATCGCTCGCCACCTCCTCTCCTTCCTCCACCTCCTTACACCCTTCTTATTCCCTCTGTCGTCGTCATCACCTGTGTATATACCCTCCTCCAACAGGGTTCGACTTCGTGATCTCGATTCCGTCTTGTTACTCTTATTCTTCTGTGAAGTTCGTCAGCACCAGCCGACAATTCTGGAGAACGTATCCCCTGCACGCTGGCAGGGGATACTGAAAACGTATGGCTCTGATACCATATTAGGTAACCTATACACAGGGTTCGCATTATCCCTATCTCCCTACCAAGTGTTGGGGGCTCTAGTAGACCTGGTAGTAAAGTGCAGGAGGTTTGTCGGTTCGAAAGGGTGTGATGGCGTTGAGGCGGGGAAGGAGGTAGCGGCATCCGTGGACGCGGTGGTGGCGTTGCCGTCAGTCGAGAGTGGTGGTGGGGTAGAGTGTGTGATATGCAAAGAGGAGATGAGTCAAGGGAGGGATGTGTGTGAACTTCCATGTCAACACAAATTCCATTGGAAGTGTGTGTTGCCTTGGCTTAGCAAAAGAAACACATGTCCTTGTTGTAGGTTCCTGCTGCCGACGGATGACGTCTACGGCGAGATCCAACGGTTGTGGGATGCCATTGTTAAACTTGGTCTGCAGATATAA

Protein sequence

MADQSTTTTTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEAGKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17383.1	Spo17383.1	mRNA

Homology

[Close]

BLAST of Spo17383.1 vs. NCBI nr
Match: gi|902230907|gb|KNA22040.1| (hypothetical protein SOVF_037690 [Spinacia oleracea])

HSP 1 Score: 538.1 bits (1385), Expect = 9.200e-150
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1


		  
Query: 13  MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL 72
           MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL
Sbjct: 1   MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL 60

Query: 73  IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN 132
           IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN
Sbjct: 61  IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN 120

Query: 133 VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA 192
           VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA
Sbjct: 121 VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA 180

Query: 193 GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN 252
           GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN
Sbjct: 181 GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN 240

Query: 253 TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 285
           TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI
Sbjct: 241 TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 272

[Close]

BLAST of Spo17383.1 vs. NCBI nr
Match: gi|731345898|ref|XP_010684164.1| (PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 378.3 bits (970), Expect = 1.200e-101
Identity = 208/281 (74.02%), Postives = 231/281 (82.21%), Query Frame = 1


		  
Query: 8   TTTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLS 67
           +T ES+IMAALSTLTSSQL+SLS SLS AF RHN+HL SLLTSPTLF HTLNHLYSLSL 
Sbjct: 5   STPESIIMAALSTLTSSQLSSLSHSLSTAFHRHNNHLTSLLTSPTLFTHTLNHLYSLSLP 64

Query: 68  EKSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQP 127
           +KSLLIARHLLSFL  LTPF     SS P    +SNRVRL DLDSVLLLLFFCEVRQH P
Sbjct: 65  QKSLLIARHLLSFLRFLTPFFI---SSPPTL--NSNRVRLCDLDSVLLLLFFCEVRQHHP 124

Query: 128 TILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGC 187
           T+LE  SPA WQGILK Y  +T+L NL    A  ++P+QVLG  VDLV+KCRRFV SKGC
Sbjct: 125 TLLET-SPAEWQGILKNYCFNTML-NLS---ACVVTPFQVLGVFVDLVLKCRRFVTSKGC 184

Query: 188 DGVEAG-KEVAASVDAVVALPSVESG---GGVECVICKEEMSQGRDVCELPCQHKFHWKC 247
            G++ G KEVAAS +AVVALPSV+     GGVECVICK+EM +GRDVC+LPCQH FHW C
Sbjct: 185 -GIDPGRKEVAASAEAVVALPSVQVSKGCGGVECVICKDEMREGRDVCQLPCQHLFHWMC 244

Query: 248 VLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 285
           VLPWLSKRNTCPCCRFLLPTDDVYGEI+RLW AIVK+GLQ+
Sbjct: 245 VLPWLSKRNTCPCCRFLLPTDDVYGEIERLWSAIVKVGLQV 274

[Close]

BLAST of Spo17383.1 vs. NCBI nr
Match: gi|1021017455|gb|KZM80050.1| (hypothetical protein DCAR_000454 [Daucus carota subsp. sativus])

HSP 1 Score: 276.9 bits (707), Expect = 3.800e-71
Identity = 153/272 (56.25%), Postives = 196/272 (72.06%), Query Frame = 1


		  
Query: 12  SMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSL 71
           S+ M ALSTLT  QL+ L AS+SA  +RHN  LA+LL+SP LF+ TL HL SLSL  KSL
Sbjct: 6   SVFMNALSTLTPPQLSDLVASISALLQRHNRRLATLLSSPALFSLTLRHLESLSLHHKSL 65

Query: 72  LIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILE 131
           LIA+HLLS L  L+ F+    +S+P Y  S++ ++LRDLD+VLLLL FCE+RQH PT LE
Sbjct: 66  LIAQHLLSSLTHLSHFMHT-KTSAPSY--SASNIKLRDLDAVLLLLLFCELRQHDPTALE 125

Query: 132 NVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGV- 191
              P++W+ +L  Y    +   + T  ++ +S  +VL   V+L+ K  +FVG   CDG  
Sbjct: 126 -AEPSKWRLVLCNY---YMYNTMLTFSSMIVSDTEVLNKFVELLSKFLKFVGVVDCDGSG 185

Query: 192 EAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLS 251
           + GKEVAA+   VVALPSVE +GGG ECVICKEEM QGRDVC++PC H FHW C+LPWL 
Sbjct: 186 KEGKEVAAAAAVVVALPSVEVTGGGKECVICKEEMKQGRDVCKMPCTHLFHWMCILPWLR 245

Query: 252 KRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLG 282
           K NTCPCCR+ LP+DDV GEI+RLW+ +VK+G
Sbjct: 246 KTNTCPCCRYRLPSDDVSGEIERLWEVLVKMG 270

[Close]

BLAST of Spo17383.1 vs. NCBI nr
Match: gi|731399058|ref|XP_010653484.1| (PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic [Vitis vinifera])

HSP 1 Score: 276.6 bits (706), Expect = 5.000e-71
Identity = 154/277 (55.60%), Postives = 199/277 (71.84%), Query Frame = 1


		  
Query: 9   TTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSE 68
           +TE++IM+ALSTL+++Q++ L+  + +  R H+  L+SLL+SPT+FAHTL+HL+S+SL  
Sbjct: 7   STEAIIMSALSTLSATQISHLTRCVYSILRYHHLRLSSLLSSPTIFAHTLHHLHSISLPH 66

Query: 69  KSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPT 128
           K+LLIARHLLS LH LT F    S+  P Y  S   ++LRDLD+VLLLL  C++RQH P 
Sbjct: 67  KTLLIARHLLSTLHHLTRFF--QSTVPPPY--SRTSLKLRDLDAVLLLLLLCQLRQHDPQ 126

Query: 129 ILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGS---- 188
            LE   P+ W+ IL T+ S T+L    TG     +   VL   +++  +CRRFVG+    
Sbjct: 127 ALE-TCPSEWRTILCTHFSKTMLSLSGTG----ATSGAVLIPYIEVAARCRRFVGAVLSG 186

Query: 189 -KGCDGVEAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHWK 248
             G  G + G+EV AS  +VVALPSVE S GGVECVICKEEM QGRDVCELPC+H FHW 
Sbjct: 187 GGGGGGEKLGREVGASTASVVALPSVEVSDGGVECVICKEEMRQGRDVCELPCEHLFHWM 246

Query: 249 CVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVK 280
           C+LPWL KRNTCPCCRF LP+DDV+ EI+RLWD +VK
Sbjct: 247 CILPWLVKRNTCPCCRFQLPSDDVFAEIERLWDVVVK 274

[Close]

BLAST of Spo17383.1 vs. NCBI nr
Match: gi|593687683|ref|XP_007144501.1| (hypothetical protein PHAVU_007G161400g [Phaseolus vulgaris])

HSP 1 Score: 271.6 bits (693), Expect = 1.600e-69
Identity = 157/280 (56.07%), Postives = 190/280 (67.86%), Query Frame = 1


		  
Query: 9   TTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSE 68
           T+ S IMAALSTLT SQ + L+ S+ +A   H+  LASLL+SPTLF+ TL+HL+SLSL +
Sbjct: 4   TSTSTIMAALSTLTPSQFSDLTHSILSATLYHHRRLASLLSSPTLFSLTLHHLHSLSLPQ 63

Query: 69  KSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPT 128
           K+LLIARHLLS LHLLT       ++SP   P S   R RDLD+ LLLLF CE   H P 
Sbjct: 64  KTLLIARHLLSSLHLLT-------ATSP---PPSTATRQRDLDAALLLLFLCETHNHNPH 123

Query: 129 ILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPY------QVLGALVDLVVKCRRFV 188
            LE    ++W+  L+T  SD++L        LS +P+       VL   V+ V +C R V
Sbjct: 124 ALE-APFSQWRINLRTIFSDSLL-------TLSSAPFGACTGSTVLIPFVETVARCWRLV 183

Query: 189 GSKGCDGVEAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHW 248
           G+  C G +   EVAAS  AVVALPSVE   GG ECVIC+EEM  GRDVCELPCQH FHW
Sbjct: 184 GALDCGGGKESGEVAASATAVVALPSVEVRAGGTECVICREEMGIGRDVCELPCQHLFHW 243

Query: 249 KCVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLG 282
            C+LPWL KRNTCPCCRF LP+DDV+GEIQRLW+ +VK G
Sbjct: 244 MCILPWLGKRNTCPCCRFRLPSDDVFGEIQRLWEVLVKTG 265

[Close]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR79_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_037690 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 6.400e-150
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1


		  
Query: 13  MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL 72
           MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL
Sbjct: 1   MIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSLL 60

Query: 73  IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN 132
           IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN
Sbjct: 61  IARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILEN 120

Query: 133 VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA 192
           VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA
Sbjct: 121 VSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEA 180

Query: 193 GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN 252
           GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN
Sbjct: 181 GKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRN 240

Query: 253 TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 285
           TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI
Sbjct: 241 TCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 272

[Close]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1H3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162370 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 8.500e-102
Identity = 208/281 (74.02%), Postives = 231/281 (82.21%), Query Frame = 1


		  
Query: 8   TTTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLS 67
           +T ES+IMAALSTLTSSQL+SLS SLS AF RHN+HL SLLTSPTLF HTLNHLYSLSL 
Sbjct: 5   STPESIIMAALSTLTSSQLSSLSHSLSTAFHRHNNHLTSLLTSPTLFTHTLNHLYSLSLP 64

Query: 68  EKSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQP 127
           +KSLLIARHLLSFL  LTPF     SS P    +SNRVRL DLDSVLLLLFFCEVRQH P
Sbjct: 65  QKSLLIARHLLSFLRFLTPFFI---SSPPTL--NSNRVRLCDLDSVLLLLFFCEVRQHHP 124

Query: 128 TILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGC 187
           T+LE  SPA WQGILK Y  +T+L NL    A  ++P+QVLG  VDLV+KCRRFV SKGC
Sbjct: 125 TLLET-SPAEWQGILKNYCFNTML-NLS---ACVVTPFQVLGVFVDLVLKCRRFVTSKGC 184

Query: 188 DGVEAG-KEVAASVDAVVALPSVESG---GGVECVICKEEMSQGRDVCELPCQHKFHWKC 247
            G++ G KEVAAS +AVVALPSV+     GGVECVICK+EM +GRDVC+LPCQH FHW C
Sbjct: 185 -GIDPGRKEVAASAEAVVALPSVQVSKGCGGVECVICKDEMREGRDVCQLPCQHLFHWMC 244

Query: 248 VLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLGLQI 285
           VLPWLSKRNTCPCCRFLLPTDDVYGEI+RLW AIVK+GLQ+
Sbjct: 245 VLPWLSKRNTCPCCRFLLPTDDVYGEIERLWSAIVKVGLQV 274

[Close]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Match: A0A165WUU1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_014952 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.700e-71
Identity = 153/272 (56.25%), Postives = 196/272 (72.06%), Query Frame = 1


		  
Query: 12  SMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSEKSL 71
           S+ M ALSTLT  QL+ L AS+SA  +RHN  LA+LL+SP LF+ TL HL SLSL  KSL
Sbjct: 6   SVFMNALSTLTPPQLSDLVASISALLQRHNRRLATLLSSPALFSLTLRHLESLSLHHKSL 65

Query: 72  LIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPTILE 131
           LIA+HLLS L  L+ F+    +S+P Y  S++ ++LRDLD+VLLLL FCE+RQH PT LE
Sbjct: 66  LIAQHLLSSLTHLSHFMHT-KTSAPSY--SASNIKLRDLDAVLLLLLFCELRQHDPTALE 125

Query: 132 NVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGSKGCDGV- 191
              P++W+ +L  Y    +   + T  ++ +S  +VL   V+L+ K  +FVG   CDG  
Sbjct: 126 -AEPSKWRLVLCNY---YMYNTMLTFSSMIVSDTEVLNKFVELLSKFLKFVGVVDCDGSG 185

Query: 192 EAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLS 251
           + GKEVAA+   VVALPSVE +GGG ECVICKEEM QGRDVC++PC H FHW C+LPWL 
Sbjct: 186 KEGKEVAAAAAVVVALPSVEVTGGGKECVICKEEMKQGRDVCKMPCTHLFHWMCILPWLR 245

Query: 252 KRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLG 282
           K NTCPCCR+ LP+DDV GEI+RLW+ +VK+G
Sbjct: 246 KTNTCPCCRYRLPSDDVSGEIERLWEVLVKMG 270

[Close]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Match: F6HQW4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02950 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.500e-71
Identity = 154/277 (55.60%), Postives = 199/277 (71.84%), Query Frame = 1


		  
Query: 9   TTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSE 68
           +TE++IM+ALSTL+++Q++ L+  + +  R H+  L+SLL+SPT+FAHTL+HL+S+SL  
Sbjct: 7   STEAIIMSALSTLSATQISHLTRCVYSILRYHHLRLSSLLSSPTIFAHTLHHLHSISLPH 66

Query: 69  KSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPT 128
           K+LLIARHLLS LH LT F    S+  P Y  S   ++LRDLD+VLLLL  C++RQH P 
Sbjct: 67  KTLLIARHLLSTLHHLTRFF--QSTVPPPY--SRTSLKLRDLDAVLLLLLLCQLRQHDPQ 126

Query: 129 ILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPYQVLGALVDLVVKCRRFVGS---- 188
            LE   P+ W+ IL T+ S T+L    TG     +   VL   +++  +CRRFVG+    
Sbjct: 127 ALE-TCPSEWRTILCTHFSKTMLSLSGTG----ATSGAVLIPYIEVAARCRRFVGAVLSG 186

Query: 189 -KGCDGVEAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHWK 248
             G  G + G+EV AS  +VVALPSVE S GGVECVICKEEM QGRDVCELPC+H FHW 
Sbjct: 187 GGGGGGEKLGREVGASTASVVALPSVEVSDGGVECVICKEEMRQGRDVCELPCEHLFHWM 246

Query: 249 CVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVK 280
           C+LPWL KRNTCPCCRF LP+DDV+ EI+RLWD +VK
Sbjct: 247 CILPWLVKRNTCPCCRFQLPSDDVFAEIERLWDVVVK 274

[Close]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Match: V7BFY5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G161400g PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.100e-69
Identity = 157/280 (56.07%), Postives = 190/280 (67.86%), Query Frame = 1


		  
Query: 9   TTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNHLYSLSLSE 68
           T+ S IMAALSTLT SQ + L+ S+ +A   H+  LASLL+SPTLF+ TL+HL+SLSL +
Sbjct: 4   TSTSTIMAALSTLTPSQFSDLTHSILSATLYHHRRLASLLSSPTLFSLTLHHLHSLSLPQ 63

Query: 69  KSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFCEVRQHQPT 128
           K+LLIARHLLS LHLLT       ++SP   P S   R RDLD+ LLLLF CE   H P 
Sbjct: 64  KTLLIARHLLSSLHLLT-------ATSP---PPSTATRQRDLDAALLLLFLCETHNHNPH 123

Query: 129 ILENVSPARWQGILKTYGSDTILGNLYTGFALSLSPY------QVLGALVDLVVKCRRFV 188
            LE    ++W+  L+T  SD++L        LS +P+       VL   V+ V +C R V
Sbjct: 124 ALE-APFSQWRINLRTIFSDSLL-------TLSSAPFGACTGSTVLIPFVETVARCWRLV 183

Query: 189 GSKGCDGVEAGKEVAASVDAVVALPSVE-SGGGVECVICKEEMSQGRDVCELPCQHKFHW 248
           G+  C G +   EVAAS  AVVALPSVE   GG ECVIC+EEM  GRDVCELPCQH FHW
Sbjct: 184 GALDCGGGKESGEVAASATAVVALPSVEVRAGGTECVICREEMGIGRDVCELPCQHLFHW 243

Query: 249 KCVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVKLG 282
            C+LPWL KRNTCPCCRF LP+DDV+GEIQRLW+ +VK G
Sbjct: 244 MCILPWLGKRNTCPCCRFRLPSDDVFGEIQRLWEVLVKTG 265

[Close]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Match: SHGR9_ARATH (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana GN=SGR9 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 7.500e-59
Identity = 143/295 (48.47%), Postives = 185/295 (62.71%), Query Frame = 1


		  
Query: 1   MADQSTTTTTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNH 60
           M D++TT     +IMA+LS L+ S LT+L+ S+ +    H   L ++L+SPTLF+ TL H
Sbjct: 1   MEDENTT-----IIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRH 60

Query: 61  LYSLSLSEKSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFC 120
           L SLSL +K+ LIA HLLS LH   P L      S   +     ++LRDLD+V+LLLF C
Sbjct: 61  LLSLSLPDKTHLIANHLLSLLH---PLLIHRKHHSSYAVT----MKLRDLDAVVLLLFLC 120

Query: 121 EVRQHQPTILENVSPARWQGILKTYGSDTILGN---LYTGFALSLSPYQVLGALVDLVVK 180
           E  Q  P +LE  S   W+ IL    S+ +L N   L+T  A  L PY      ++ +V+
Sbjct: 121 ETHQLHPDVLE-ASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPY------IETLVR 180

Query: 181 CRRFVGSKGCDG------VEAGKEVAASVDAVVALPSVE-------SGGGVECVICKEEM 240
           C+RFV   G          + G +V A+  AVVAL +VE       + G VECVICKEEM
Sbjct: 181 CKRFVDIMGGYNHLRRRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEM 240

Query: 241 SQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVK 280
           S+GRDVCE+PCQH FHWKC+LPWLSK+NTCP CRF LPTDDV+ EIQRLW+ +VK
Sbjct: 241 SEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.300e-14
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 1


		  
Query: 160 LSLSPYQVLGALVDLVVKCRRFVGSKGCDGVEAGKEVA-ASVDAVVALPSVE-----SGG 219
           L   P   LGA  DL    +R       +G++   EV  AS  A++ LP  E      GG
Sbjct: 8   LGHEPTGPLGAN-DLARNLKRLQVLAIMNGIDMEIEVPEASKRAILELPVHEIVKSDEGG 67

Query: 220 GVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTDD-VYGEIQR 273
            +EC +CKE   +G+    LPC+H+FH +C+L WL K N+CP CR+ L TDD VY E++R
Sbjct: 68  DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEELRR 126

[Close]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.800e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1


		  
Query: 198 ASVDAVVALPSVESGGGV------ECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKR 257
           AS  A+ ALP+V+    +      +C +C +E   G DV ++PC+H FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 258 NTCPCCRFLLPTDD 266
           N+CP CRF LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.600e-13
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1


		  
Query: 192 AGKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKR 251
           A K V  S+  V+  P  ++  GV+C +C  E  +   V E+PC+H FH  C+LPWL+K 
Sbjct: 55  AAKAVVQSLPVVIISPE-QADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKT 114

Query: 252 NTCPCCRFLLPTDDV-YGEIQR 273
           N+CP CR  LPTD+  Y E ++
Sbjct: 115 NSCPLCRLELPTDNADYEEFKK 135

[Close]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.800e-12
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1


		  
Query: 192 AGKEVAASVDAVVALPSVESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKR 251
           A K+V  S+  V   P  ++   ++C +C  E  +G  V +LPC+H FH  C+LPWL K 
Sbjct: 55  AAKKVVESLPKVTVTPE-QADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKT 114

Query: 252 NTCPCCRFLLPTD 265
           N+CP CR  LPTD
Sbjct: 115 NSCPLCRHELPTD 126

[Close]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Match: AT5G02750.1 (RING/U-box superfamily protein)

HSP 1 Score: 228.8 bits (582), Expect = 4.200e-60
Identity = 143/295 (48.47%), Postives = 185/295 (62.71%), Query Frame = 1


		  
Query: 1   MADQSTTTTTESMIMAALSTLTSSQLTSLSASLSAAFRRHNHHLASLLTSPTLFAHTLNH 60
           M D++TT     +IMA+LS L+ S LT+L+ S+ +    H   L ++L+SPTLF+ TL H
Sbjct: 1   MEDENTT-----IIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRH 60

Query: 61  LYSLSLSEKSLLIARHLLSFLHLLTPFLFPLSSSSPVYIPSSNRVRLRDLDSVLLLLFFC 120
           L SLSL +K+ LIA HLLS LH   P L      S   +     ++LRDLD+V+LLLF C
Sbjct: 61  LLSLSLPDKTHLIANHLLSLLH---PLLIHRKHHSSYAVT----MKLRDLDAVVLLLFLC 120

Query: 121 EVRQHQPTILENVSPARWQGILKTYGSDTILGN---LYTGFALSLSPYQVLGALVDLVVK 180
           E  Q  P +LE  S   W+ IL    S+ +L N   L+T  A  L PY      ++ +V+
Sbjct: 121 ETHQLHPDVLE-ASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPY------IETLVR 180

Query: 181 CRRFVGSKGCDG------VEAGKEVAASVDAVVALPSVE-------SGGGVECVICKEEM 240
           C+RFV   G          + G +V A+  AVVAL +VE       + G VECVICKEEM
Sbjct: 181 CKRFVDIMGGYNHLRRRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEM 240

Query: 241 SQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTDDVYGEIQRLWDAIVK 280
           S+GRDVCE+PCQH FHWKC+LPWLSK+NTCP CRF LPTDDV+ EIQRLW+ +VK
Sbjct: 241 SEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.200e-16
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1


		  
Query: 210 ESGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTDD 266
           +  GG+ C +CK+EM+ G    +LPC HK+H +C++PWL  RNTCP CR+ LPTDD
Sbjct: 302 DDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDD 357

[Close]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 6.400e-16
Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 1


		  
Query: 217 CVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKRNTCPCCRFLLPTD 265
           C +CKEEM  G++V ELPC+HK+H +C++PWL  RNTCP CRF LP+D
Sbjct: 372 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-14
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1


		  
Query: 198 ASVDAVVALPSVESGGGV------ECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKR 257
           AS  A+ ALP+V+    +      +C +C +E   G DV ++PC+H FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 258 NTCPCCRFLLPTDD 266
           N+CP CRF LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Match: AT5G15820.1 (RING/U-box superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.700e-14
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1


		  
Query: 198 ASVDAVVALPSVE------SGGGVECVICKEEMSQGRDVCELPCQHKFHWKCVLPWLSKR 257
           AS   V  LP VE      S   + C ICK+E+     V  LPC+H +H +C++PWL  R
Sbjct: 266 ASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIR 325

Query: 258 NTCPCCRFLLPTDDVYGEIQR 273
           NTCP CR  LPTDD+  E +R
Sbjct: 326 NTCPVCRHELPTDDLEYERKR 346

The following BLAST results are available for this feature:

BLAST of Spo17383.1 vs. NCBI nr
BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
BLAST of Spo17383.1 vs. TAIR (Arabidopsis)

BLAST of Spo17383.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230907\|gb\|KNA22040.1\|	9.2e-150	100.	hypothetical protein SOVF_0376...	[more]
gi\|731345898\|ref\|XP_010684164.1\|	1.2e-101	74.0	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|1021017455\|gb\|KZM80050.1\|	3.8e-71	56.2	hypothetical protein DCAR_0004...	[more]
gi\|731399058\|ref\|XP_010653484.1\|	5.0e-71	55.6	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|593687683\|ref\|XP_007144501.1\|	1.6e-69	56.0	hypothetical protein PHAVU_007...	[more]

BLAST of Spo17383.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RR79_SPIOL	6.4e-150	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C1H3_BETVU	8.5e-102	74.0	Uncharacterized protein OS=Bet...	[more]
A0A165WUU1_DAUCA	2.7e-71	56.2	Uncharacterized protein OS=Dau...	[more]
F6HQW4_VITVI	3.5e-71	55.6	Putative uncharacterized prote...	[more]
V7BFY5_PHAVU	1.1e-69	56.0	Uncharacterized protein OS=Pha...	[more]

BLAST of Spo17383.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SHGR9_ARATH	7.5e-59	48.4	E3 ubiquitin-protein ligase SG...	[more]
RN181_DROME	3.3e-14	40.8	E3 ubiquitin-protein ligase RN...	[more]
RNG1L_ARATH	2.8e-13	45.9	E3 ubiquitin-protein ligase RI...	[more]
RN181_DANRE	3.6e-13	42.6	E3 ubiquitin-protein ligase RN...	[more]
RN181_XENTR	1.8e-12	43.8	E3 ubiquitin-protein ligase RN...	[more]

BLAST of Spo17383.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G02750.1	4.2e-60	48.4	RING/U-box superfamily protein	[more]
AT5G08139.1	2.2e-16	53.5	RING/U-box superfamily protein	[more]
AT5G60820.1	6.4e-16	62.5	RING/U-box superfamily protein	[more]
AT3G19950.1	1.6e-14	45.9	RING/U-box superfamily protein	[more]
AT5G15820.1	2.7e-14	45.6	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 216..258 score: 1.1
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 217..257 score: 6.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 217..258 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 215..259 score: 9.4
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 40..108 score: 7.8E-66coord: 138..280 score: 7.8
None	No IPR available	PANTHER	PTHR22763:SF20	E3 LIGASE SHOOT GRAVITROPISM 9	coord: 40..108 score: 7.8E-66coord: 138..280 score: 7.8
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 208..264 score: 2.83

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006508	proteolysis
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0004190	aspartic-type endopeptidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08419	0.72	Barchart \| Table
Spo12145	0.68	Barchart \| Table
Spo24961	0.68	Barchart \| Table
Spo00592	0.67	Barchart \| Table
Spo11150	0.66	Barchart \| Table