Spo17411 (gene) | SpinachBase

Overview


Name	Spo17411
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Chaperone protein dnaJ 11
Location	chr3 : 48021877 .. 48022344 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCATTTCCTCTCTCCTCTTCCTCATTCACCTCCGTCCAACTGAAATCTTCCAAACGCCTTGCCGGAAACTTCTCTCCTTCACCGGAAACTGTCAGATTCCGACGCTTTTACGCCGTTGCTGCTACGGCTTCGCCGGAAACCGCTTCCAGTTCATTCTACGAGGTATTGGAGATCTCGATCGGTGCAACCTACGAGGAGATCAGGGCGGCGTATCGAAGACTCGCGAGATCCTGCCACCCTGACGCCGCCACCCGAGGAGAGATAAAGTCCCCCGACGATTTCATGAGAGTTCACGCCGCTTACACCGTATTATCTGACCCCGACAAACGCGCCGACTATGATCAGAAATTGTCGCAAATTCCCCTGCCGACGGAGAGACCGTTCCCAGGATTATCGGCATCTCCGACGTCGTCTTTCTGTCGGGTTCCCCGGCGAAATTGGGAGACGGATCAATGCTGGTGA

mRNA sequence

ATGCTCTCATTTCCTCTCTCCTCTTCCTCATTCACCTCCGTCCAACTGAAATCTTCCAAACGCCTTGCCGGAAACTTCTCTCCTTCACCGGAAACTGTCAGATTCCGACGCTTTTACGCCGTTGCTGCTACGGCTTCGCCGGAAACCGCTTCCAGTTCATTCTACGAGGTATTGGAGATCTCGATCGGTGCAACCTACGAGGAGATCAGGGCGGCGTATCGAAGACTCGCGAGATCCTGCCACCCTGACGCCGCCACCCGAGGAGAGATAAAGTCCCCCGACGATTTCATGAGAGTTCACGCCGCTTACACCGTATTATCTGACCCCGACAAACGCGCCGACTATGATCAGAAATTGTCGCAAATTCCCCTGCCGACGGAGAGACCGTTCCCAGGATTATCGGCATCTCCGACGTCGTCTTTCTGTCGGGTTCCCCGGCGAAATTGGGAGACGGATCAATGCTGGTGA

Coding sequence (CDS)

ATGCTCTCATTTCCTCTCTCCTCTTCCTCATTCACCTCCGTCCAACTGAAATCTTCCAAACGCCTTGCCGGAAACTTCTCTCCTTCACCGGAAACTGTCAGATTCCGACGCTTTTACGCCGTTGCTGCTACGGCTTCGCCGGAAACCGCTTCCAGTTCATTCTACGAGGTATTGGAGATCTCGATCGGTGCAACCTACGAGGAGATCAGGGCGGCGTATCGAAGACTCGCGAGATCCTGCCACCCTGACGCCGCCACCCGAGGAGAGATAAAGTCCCCCGACGATTTCATGAGAGTTCACGCCGCTTACACCGTATTATCTGACCCCGACAAACGCGCCGACTATGATCAGAAATTGTCGCAAATTCCCCTGCCGACGGAGAGACCGTTCCCAGGATTATCGGCATCTCCGACGTCGTCTTTCTGTCGGGTTCCCCGGCGAAATTGGGAGACGGATCAATGCTGGTGA

Protein sequence

MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17411.1	Spo17411.1	mRNA

Homology

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BLAST of Spo17411.1 vs. NCBI nr
Match: gi|902089736|gb|KNA03303.1| (hypothetical protein SOVF_210490 [Spinacia oleracea])

HSP 1 Score: 308.9 bits (790), Expect = 5.000e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1

		  
Query: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60
           MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI
Sbjct: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60

Query: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120
           SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS
Sbjct: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120

Query: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW
Sbjct: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 155

[Close]

BLAST of Spo17411.1 vs. NCBI nr
Match: gi|731337702|ref|XP_010679930.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 229.6 bits (584), Expect = 3.800e-57
Identity = 119/155 (76.77%), Postives = 132/155 (85.16%), Query Frame = 1

		  
Query: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60
           MLS  LSSSSFTSV LKS K LAG  S SPE+V+FRR  AV+ATASPETA+SS YEVLEI
Sbjct: 1   MLSISLSSSSFTSVHLKSPKPLAGKLSISPESVKFRRASAVSATASPETAASSLYEVLEI 60

Query: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120
           SI AT EEI+AAYRRLARSCHPD A   E +S D+F+RVHAAY+VLSDP+KRADYD+K+S
Sbjct: 61  SIAATNEEIKAAYRRLARSCHPDVAAGEERQSADEFIRVHAAYSVLSDPEKRADYDRKMS 120

Query: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           QI  P+ R FPGLSASPTSSFCRVPRRNWETDQCW
Sbjct: 121 QIIRPSTRQFPGLSASPTSSFCRVPRRNWETDQCW 155

[Close]

BLAST of Spo17411.1 vs. NCBI nr
Match: gi|697114948|ref|XP_009611393.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana tomentosiformis])

HSP 1 Score: 122.9 bits (307), Expect = 5.000e-25
Identity = 75/153 (49.02%), Postives = 92/153 (60.13%), Query Frame = 1

		  
Query: 25  NFSPSPETVRFRR---FYAVAAT-ASPETASS-----------------SFYEVLEISIG 84
           N + SP ++ FR+   F A AAT AS ET S+                 SFYE+L+I +G
Sbjct: 25  NSALSPSSLTFRQSGYFTAAAATCASVETESTTSRYSTLPRNLIPVSPASFYEILDIPMG 84

Query: 85  ATYEEIRAAYRRLARSCHPDAATRGEI-KSPDDFMRVHAAYTVLSDPDKRADYDQKLSQI 144
           AT +EI+AAYRRLAR CHPD A   +   S DDFM++HAAY+ LSDPDKRADYD++LS+ 
Sbjct: 85  ATVQEIKAAYRRLARVCHPDVAAMDQKDSSADDFMKIHAAYSTLSDPDKRADYDRRLSRR 144

Query: 145 PLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
                    G S S  S F     RNWETDQCW
Sbjct: 145 RPSINLYSGGCSPSAMSGFTGYTPRNWETDQCW 177

[Close]

BLAST of Spo17411.1 vs. NCBI nr
Match: gi|970005650|ref|XP_015063665.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Solanum pennellii])

HSP 1 Score: 122.1 bits (305), Expect = 8.600e-25
Identity = 75/156 (48.08%), Postives = 90/156 (57.69%), Query Frame = 1

		  
Query: 25  NFSPSPETVRFRRF-------YAVAATASPETASS-----------------SFYEVLEI 84
           N  PSP +VRFR+         A A  AS ET S+                 SFYE+L I
Sbjct: 28  NSLPSPSSVRFRQSGNFTTAAAAAATCASVETESTTSRYSTLPSDIIHASPASFYEILGI 87

Query: 85  SIGATYEEIRAAYRRLARSCHPD-AATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKL 144
            IGAT +EI+AAYRRLAR CHPD AA   +  S DDFM++H+AY+ LSDPDKRADYD++L
Sbjct: 88  PIGATIQEIKAAYRRLARVCHPDVAAIDQKDTSADDFMKIHSAYSTLSDPDKRADYDRRL 147

Query: 145 SQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
            +          G S S  S+F     RNWETDQCW
Sbjct: 148 FRRRRNVNLYSGGCSPSAMSAFTGYTTRNWETDQCW 183

[Close]

BLAST of Spo17411.1 vs. NCBI nr
Match: gi|698473037|ref|XP_009784395.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 121.7 bits (304), Expect = 1.100e-24
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 1

		  
Query: 29  SPETVRFRR---FYAVAAT-ASPETASS-----------------SFYEVLEISIGATYE 88
           SP ++ FR+   F A AAT AS ET S+                 SFYE+L+I +GAT +
Sbjct: 29  SPSSLTFRQSGYFTAAAATCASVETESTTSRYSTLPRNLIPASPASFYEILDIPMGATVQ 88

Query: 89  EIRAAYRRLARSCHPD-AATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLSQIPLPT 148
           EI+AAYRRLAR CHPD AA   +  S DDFM++H+AY+ LSDPDKRADYD++LS+     
Sbjct: 89  EIKAAYRRLARVCHPDVAAIDQKDSSADDFMKIHSAYSTLSDPDKRADYDRRLSRRRRSI 148

Query: 149 ERPFPGLSASPTSSFCRVPRRNWETDQCW 156
                G S S  S F     RNWETDQCW
Sbjct: 149 NLYSGGCSPSAMSGFTGYTPRNWETDQCW 177

[Close]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9D7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210490 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 3.500e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1

		  
Query: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60
           MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI
Sbjct: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60

Query: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120
           SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS
Sbjct: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120

Query: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW
Sbjct: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 155

[Close]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F1V8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130600 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.700e-57
Identity = 119/155 (76.77%), Postives = 132/155 (85.16%), Query Frame = 1

		  
Query: 1   MLSFPLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPETASSSFYEVLEI 60
           MLS  LSSSSFTSV LKS K LAG  S SPE+V+FRR  AV+ATASPETA+SS YEVLEI
Sbjct: 1   MLSISLSSSSFTSVHLKSPKPLAGKLSISPESVKFRRASAVSATASPETAASSLYEVLEI 60

Query: 61  SIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLS 120
           SI AT EEI+AAYRRLARSCHPD A   E +S D+F+RVHAAY+VLSDP+KRADYD+K+S
Sbjct: 61  SIAATNEEIKAAYRRLARSCHPDVAAGEERQSADEFIRVHAAYSVLSDPEKRADYDRKMS 120

Query: 121 QIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           QI  P+ R FPGLSASPTSSFCRVPRRNWETDQCW
Sbjct: 121 QIIRPSTRQFPGLSASPTSSFCRVPRRNWETDQCW 155

[Close]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Match: F6GWM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03470 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.700e-24
Identity = 78/163 (47.85%), Postives = 97/163 (59.51%), Query Frame = 1

		  
Query: 7   SSSSFTSVQLKSSKRLAGN-FSPSPETVRF-----RRFYAVAATASP------ETAS-SS 66
           SS SF    L+ S R  G  FSP+P  V +        Y     A P      ETAS +S
Sbjct: 44  SSPSF----LRPSPRFTGRAFSPAPPRVSYRQPCVSAVYTSTERARPSYLSLAETASCAS 103

Query: 67  FYEVLEISIGATYEEIRAAYRRLARSCHPD-AATRGEIKSPDDFMRVHAAYTVLSDPDKR 126
            YE+L I +GAT +EI++AYR+LAR CHPD AA   +  S D+FMR+HAAY+ LSDP+KR
Sbjct: 104 LYEILGIRMGATSQEIKSAYRKLARVCHPDVAAISRKDSSADEFMRIHAAYSTLSDPEKR 163

Query: 127 ADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           ADYD+ L     P E  + G+S+   S F    RRNWETDQCW
Sbjct: 164 ADYDRSLFMRQQPIE-SYAGISSPTMSGFSGYTRRNWETDQCW 201

[Close]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Match: A0A0E0KB72_ORYPU (Uncharacterized protein OS=Oryza punctata PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.100e-23
Identity = 71/153 (46.41%), Postives = 90/153 (58.82%), Query Frame = 1

		  
Query: 5   PLSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPE--TASSSFYEVLEISI 64
           P   S   S +L +   L+ +FSPS            A+  SP+   A++SFY+VL +  
Sbjct: 115 PTHPSPPPSPRLHAPPPLSASFSPS------------ASVVSPDHVAAAASFYDVLGLHA 174

Query: 65  GATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQKLSQI 124
           GA+  EI+ AYRRLAR+ HPDA+      S DDF+RVHAAY+ LSDPDKRADYD++L  +
Sbjct: 175 GASAREIKDAYRRLARAVHPDASPHPAAASSDDFIRVHAAYSTLSDPDKRADYDRRLLLL 234

Query: 125 PLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
                R  P L  SPT  F    RR WETDQCW
Sbjct: 235 AAGRRRATPSLGRSPT--FPARRRRTWETDQCW 253

[Close]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Match: A0A0E0GJM6_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.900e-23
Identity = 73/158 (46.20%), Postives = 93/158 (58.86%), Query Frame = 1

		  
Query: 6   LSSSSFTSVQLKSSKRLAGNFSPSPETVRFRRFYAVAATASPET--------ASSSFYEV 65
           LSSSSF + +  ++     N SP P          ++A+ SP T        A++SFY+V
Sbjct: 168 LSSSSFLAFRPAAASPTT-NPSPPPSPRLHAAPPPLSASFSPSTSVVAPDHVAAASFYDV 227

Query: 66  LEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRADYDQ 125
           L +  GA+  EI+ AYRRLAR+ HPDA+      S DDF+RVHAAY+ LSDPDKRADYD+
Sbjct: 228 LGLHAGASAREIKDAYRRLARAVHPDASPHPAAASSDDFIRVHAAYSTLSDPDKRADYDR 287

Query: 126 KLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           +L  +     R  P L  SPT  F    RR WETDQCW
Sbjct: 288 RLLLLAAGRRRATPSLGRSPT--FPARRRRTWETDQCW 322

[Close]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Match: DNJ11_ARATH (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.300e-20
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 1

		  
Query: 49  TASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAA--TRGEIKSPDDFMRVHAAYTVL 108
           T  +S Y+VLE+ +GAT ++I++AYRRLAR CHPD A   R    S D+FM++HAAY  L
Sbjct: 61  TVPASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTL 120

Query: 109 SDPDKRADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           SDP+KR+ YD+++    L   RP        TS       RNWETDQCW
Sbjct: 121 SDPEKRSVYDRRM----LRRSRPL----TVGTSGLGSYVGRNWETDQCW 161

[Close]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein DnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.000e-10
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1

		  
Query: 50  ASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDP 109
           AS  +YEVL +S GA+ +EI+ AYR+LA   HPD   +G  ++ + F  ++ AY VLSDP
Sbjct: 2   ASKDYYEVLGLSKGASDDEIKKAYRKLAMKYHPD-RNQGNKEAEEKFKDINEAYQVLSDP 61

Query: 110 DKRADYDQ 118
            K+A+YDQ
Sbjct: 62  QKKANYDQ 68

[Close]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.800e-10
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 1

		  
Query: 54  FYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRA 113
           +YE+L +   AT EEI+ AYRRLA+  HPD A  G  ++ + F  ++ AY VLSDP+KR 
Sbjct: 7   YYEILGVPRNATQEEIKRAYRRLAKQYHPD-ANPGNKEAEEKFKEINEAYEVLSDPEKRR 66

Query: 114 DYDQ 118
            YDQ
Sbjct: 67  KYDQ 69

[Close]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.300e-9
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1

		  
Query: 51  SSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPD 110
           S  +YE+L +S  A  +EI+ AYRRLAR  HPD   + +  + + F  +  AY +LSDPD
Sbjct: 4   SKDYYEILGVSRDADQKEIKKAYRRLARKYHPD-INKDDPDAEEKFKEISEAYEILSDPD 63

Query: 111 KRADYDQ 118
           KRA YDQ
Sbjct: 64  KRARYDQ 69

[Close]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.300e-9
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1

		  
Query: 54  FYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRA 113
           +YE+L ++  AT EEI+ AYR+LAR  HPD   + +  + + F  ++ AY VLSDP+KRA
Sbjct: 5   YYEILGVARNATPEEIKKAYRKLARKYHPD-VNKDDPNAAEKFKEINEAYEVLSDPEKRA 64

Query: 114 DYDQ 118
            YDQ
Sbjct: 65  RYDQ 67

[Close]

BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.500e-23
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 1

		  
Query: 49  TASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRG-EIKSPDDFMRVHAAYTVLS 108
           +A++S YE+LEI +G+T +EI++AYRRLAR CHPD A    +  S DDFM++HAAY  LS
Sbjct: 64  SATASLYEILEIPVGSTSQEIKSAYRRLARICHPDVARNSRDNSSADDFMKIHAAYCTLS 123

Query: 109 DPDKRADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           DP+KRA YD++     L   RP        T+ +     RNWETDQCW
Sbjct: 124 DPEKRAVYDRR----TLLRSRPL-------TAGYGSYGGRNWETDQCW 160

[Close]

BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 7.200e-22
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 1

		  
Query: 49  TASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAA--TRGEIKSPDDFMRVHAAYTVL 108
           T  +S Y+VLE+ +GAT ++I++AYRRLAR CHPD A   R    S D+FM++HAAY  L
Sbjct: 61  TVPASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTL 120

Query: 109 SDPDKRADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           SDP+KR+ YD+++    L   RP        TS       RNWETDQCW
Sbjct: 121 SDPEKRSVYDRRM----LRRSRPL----TVGTSGLGSYVGRNWETDQCW 161

[Close]

BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 5.600e-14
Identity = 47/114 (41.23%), Postives = 59/114 (51.75%), Query Frame = 1

		  
Query: 42  AATASPETASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHA 101
           A T S     SS YE+L+++  A+  EI+ AYR LA+  HPDA+         DFM +H 
Sbjct: 53  AVTESVRRRVSSLYELLKVNETASLTEIKTAYRSLAKVYHPDASE----SDGRDFMEIHK 112

Query: 102 AYTVLSDPDKRADYDQKLSQIPLPTERPFPGLSASPTSSFCRVPRRNWETDQCW 156
           AY  L+DP  RA YD   S + +P  R   G  A   S       R WETDQCW
Sbjct: 113 AYATLADPTTRAIYD---STLRVPRRRVHAG--AMGRSGRVYATTRRWETDQCW 157

[Close]

BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Match: AT5G01390.1 (DNAJ heat shock family protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.400e-9
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1

		  
Query: 54  FYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDPDKRA 113
           FY+VLE+   A  +E++ AYR+LA   HPD     + ++   F ++  AY VLSDP KRA
Sbjct: 5   FYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRA 64

Query: 114 DYDQ----KLSQIPLP 126
            Y+Q     L+Q P P
Sbjct: 65  IYEQYGEEGLNQAPPP 80

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BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 58.9 bits (141), Expect = 3.200e-9
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 1

		  
Query: 50  ASSSFYEVLEISIGATYEEIRAAYRRLARSCHPDAATRGEIKSPDDFMRVHAAYTVLSDP 109
           A + FY VL +S  AT  EI++AYR+LARS HPD     +  + D F  +  AY +LSD 
Sbjct: 82  ADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPD--VNKDAGAEDKFKEISNAYEILSDD 141

Query: 110 DKRADYDQ 118
           +KR+ YD+
Sbjct: 142 EKRSLYDR 147

The following BLAST results are available for this feature:

BLAST of Spo17411.1 vs. NCBI nr
BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
BLAST of Spo17411.1 vs. TAIR (Arabidopsis)

BLAST of Spo17411.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902089736\|gb\|KNA03303.1\|	5.0e-81	100.	hypothetical protein SOVF_2104...	[more]
gi\|731337702\|ref\|XP_010679930.1\|	3.8e-57	76.7	PREDICTED: chaperone protein d...	[more]
gi\|697114948\|ref\|XP_009611393.1\|	5.0e-25	49.0	PREDICTED: chaperone protein d...	[more]
gi\|970005650\|ref\|XP_015063665.1\|	8.6e-25	48.0	PREDICTED: chaperone protein d...	[more]
gi\|698473037\|ref\|XP_009784395.1\|	1.1e-24	49.6	PREDICTED: chaperone protein d...	[more]

BLAST of Spo17411.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9Q9D7_SPIOL	3.5e-81	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8F1V8_BETVU	2.7e-57	76.7	Uncharacterized protein OS=Bet...	[more]
F6GWM6_VITVI	1.7e-24	47.8	Putative uncharacterized prote...	[more]
A0A0E0KB72_ORYPU	1.1e-23	46.4	Uncharacterized protein OS=Ory...	[more]
A0A0E0GJM6_ORYNI	1.9e-23	46.2	Uncharacterized protein OS=Ory...	[more]

BLAST of Spo17411.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
DNJ11_ARATH	1.3e-20	48.6	Chaperone protein dnaJ 11, chl...	[more]
DNAJ_CLONN	6.0e-10	48.5	Chaperone protein DnaJ OS=Clos...	[more]
DNAJ_CALS8	7.8e-10	50.0	Chaperone protein DnaJ OS=Cald...	[more]
DNAJ_HALOH	1.3e-9	47.7	Chaperone protein DnaJ OS=Halo...	[more]
DNAJ_CARHZ	1.3e-9	48.4	Chaperone protein DnaJ OS=Carb...	[more]

BLAST of Spo17411.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT2G17880.1	8.5e-23	50.0	Chaperone DnaJ-domain superfam...	[more]
AT4G36040.1	7.2e-22	48.6	Chaperone DnaJ-domain superfam...	[more]
AT3G13310.1	5.6e-14	41.2	Chaperone DnaJ-domain superfam...	[more]
AT5G01390.1	2.4e-9	42.1	DNAJ heat shock family protein	[more]
AT4G39960.1	3.2e-9	45.5	Molecular chaperone Hsp40/DnaJ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 73..88 score: 7.7E-12coord: 91..111 score: 7.7E-12coord: 55..73 score: 7.7
IPR001623	DnaJ domain	GENE3D	1.10.287.110		coord: 51..119 score: 1.5
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 54..116 score: 1.0
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 52..111 score: 3.6
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 53..119 score: 16
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 52..122 score: 4.97
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 1..122 score: 2.3
None	No IPR available	PANTHER	PTHR24078:SF284	DNAJ HOMOLOG SUBFAMILY C MEMBER 25	coord: 1..122 score: 2.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12339	0.71	Barchart \| Table
Spo24616	0.71	Barchart \| Table
Spo25224	0.68	Barchart \| Table
Spo08372	0.65	Barchart \| Table