Spo17418 (gene)

Overview
NameSpo17418
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCis-prenyltransferase, dehydrodolichyl diphosphate synthase
Locationchr6 : 32946388 .. 32951758 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATCACAAGATTTTTGCACCCTCGAGCTGCAATACCGCTCTCAAACTCTACTCTTAATCTCTCTTCTAAACTCCAATCTTACCTCCCTAATCATGTTCATACTCATTTCAACAATCATCTTCCCGGGTCCATTCTGAATTTTCGGGCCCATTTCTTCTTCTCCTCCTTACCAGAAAATGCGATGGCCGGGAAAGTTCAACCAGATACTGGGAAATCGCCGGAGACAGAGCTTCCGGTGTGTCTCCAGCGAGAGCTGATGCCAGGACACGTGGCGCTGATATTGGATGGGAATAGGAGATGGGCTGAGCTTAGAGGGCTTGGTTCTGAGGCGGGTCATGAGGCTGGGCTTAAGACTTTGCTTCAAGTAATGGGCTTGTGTGTTAAATGGGGCATCAAAGTTGCCACCTTTTTCTTGTTCTCGTCTGAAAATTGGAGTCGCCCCAAAGTTAGTGCTTATCTCTTCTTTGCCTTTATTTTTTTTTTATCCAATATTTGAAATGCTTAACCCAAAGTGATTACGGTAACTTTTGTGTAAAATCGTCTTATCGGAAAAATTATTTTGATTGTTTAACTAATTAGTTTTAGTTTTTAATTTATTAGTTTCATTTTTTAACTAATTGGTTTCAGGGCTTAACTAATTAGTTCCAGTGCTTAACTAATTGATTTCATTCTTTAACTTATATGACACCAAGATGATCTTTTGTATAAGATCGCCGTACATAAAAATTTGTAAAGGAATCATGACTTGCAAGGTAAACTTATGGAATTGAAGTACTATGTTGCTTGAACGCGTGTCAGTTATTCTAAAACAGATGGAATATTGTTTTGTTTTGAGGTAAAACTAGTGTGTGGCCCGGGCGATGCCCCGGTTGCTACATTGAATAACTAAAGTTTTAGATTTTTCTTGAGCTCAATACTTGACCAAAATACTTGTATTCTCTAGAATGAAAAATATCCGTTAATTTCGTCAAACACAGACATGCTAAGTCATTTATCATGGCAAGTAAGTTTTCAATCATATCATCTTACAATTTGTATAATTTGTTTTCTCATGGAACTAAGTGCGTCAAATTAACAAACAAAAAAATTAGATATATATGCAGCTATGTAAGGCAATCCTATAGTTGATTCTTTTTTTGATAAATTTTCCTTCTATGCTTTTTTATTTATCAAAGCTGGAAAAAAAGACCAGCAAAACACCAAAAACAAGGAGAGAGTTGTCAAGACTGGAGAGGCAACCCTTCTAGGAAGGTTCCCCACCTAGAGAGAACAACCAAACAAACCTAAACCAATCTATTTAGCTACCTTACATAGCTTGTGTACATTGAAAATTCTAATACAAACCATGTATTGTATTTGTCTAACAAGACCCTCAACAGTTTGTAGATTCTTCTTGAAAACTCTATTGTTTATCTCTTTCCACAGATGGTAAACAGAAATAACTAGAGCCAATCTATAGAGTTGGTGTGTAGCATTGTTTTTGTTGAATTCACTGTTAACTCTTTGCATTTCCTGTTGCCAATTCTCTGGTTTCCTGGAATAACCTAACCAGTCCAAAATCTTGCCCCAAACTGCAGCACTAACAGAACAATCAAAGAATAAATGATTCAACGTCTCACCAACACTACCACATAAGCCACATAAATCTGAGCACTGCACTCCAAATTTAGCCAATCTATCACATGTAGCCAGTCTTCCTAGAATAGCAAGCCAGCAAATAAAGATGCATTTTGGTGGTGCGGGAGTATTACACAGTATTTTCCACCAAGGAACTCGACTGTCAACGCCTTTTATCTCCTTATATATCTGCTTTATCACAAAAGTTTCACTGTTCAAGTAGTTATTGTGATTGCAAACTTCTTCAAGCCAACTAATAGCACCAAAGATCTTTCTGATTACCCAGGAAGCTTGAGGAGGAGGTTTCATCTGAGTAATGTCATTGTTTTTAATATAGTACATATGAACCCATTTGATCCAAAGCGTGTCTTTTTTCCTAGCAAGATTCCAGAGCAGCTTGCTGATAGCTAAATGATTCCAAGTGAACATATCTGTAAGGTTCCAACCACCCGCACTCTTAGGTAAGCAAAGAGTATCCCAAGACACTAACACCCTCTTTGAAGCACCGGATTTGCCTGTCCATAAAAAGGTTCTGCAGGCAGCCTGTAGAAGCTTGAGAACCTTTTTAGGAATTAGAAATACTTGGCACCAATATGTTTGAATGCTGCAAAGAACAGCCTTGATCAACTGAACCCTTCCGGCATAAGAAAGAAACCTCGAAGACCAATTCTCAATTCTATCTAGGATTTTCTTAATAAGGGGTTGACATTGTATAACACTCAGCTTTCTGGATGAGAGAGGGACCCCCAAATACTTGAAGGGGAGAGAACCAACAGAGAACTGAAATTCGTTTAGAATATAAGCCTGGATGTGGTCTGGAACTCCAACAAATTAAAATAAATAGAGCTTTTGTTGAGGTTAGCTTTCCGACCTGAAGCTGTAGAGAATTTCTCAAAGGCAGTGAATAAGCTTCTGACAGATTGACTGTCTCCTCTAGAGAATAAAAGTAGATCGTCAGCAAAACATACGTGAGTGATATTCAGCTTCTTACACCTTGGATGGTAATGGAACTCTCGTGAATCTTTTAATAGGCATAAGCACCTATTCAGATACTCCATGCATATCACAAAAAGGTATGGAGACAAGGGATCTCCATACCAACTTTTAATAGTTTGAGTTAATTTAACTCTAACGTACTCCATACACCACCTTTAAATAAGATTTCGTGAACCCTAAAATCCGCACAATTACACAACTGACCGAGTAAGCAATGAAGAAAACCTTGTTATCATTGTCTATCACTTGAATTTAGTTGTAGACTTATCGTAAACGGGAAAATTTAATTTCAACAAGTTATCCTATACGTTTTATGTATTTTTTTGAAAAATAATTAGTATTTCCCTCTTTTGGAAGCCCATAGGTATAATATATCTCATCTAATGATGTAAACAATACAGGCTGTTGAGCCGGCTAGAAAACATCTCCTATTTCTTCAAGTTACTGGTCATTTGGTTTAACAAATTGGAATGAAGTGGATTATAAACCATAGAACTATAGAAAAGAGGTATGAATTAACATATACTCCGTAAATTCCTAAATAGTTGTGCGTGGTTCGCTTTGGAATGAGTTTAATATCCTACACCCGTTGTTTGGTTCGTTTTAGCGATGAATTATGTATCACGTACTACAACTAATTCATACTCCATAAATATAATGCATTAATTTACACGAGGGTTTATAAACGTATAAACGTCAAGTAGATTGTGACCAAATTAGATACAAGTTATCCAATTGATTTACTCCGTCTATTACCAACACAAAGTATACATTACTTGATCATTTATTATATAATAATATATTTTTTACATAAAATTATCCCTCTAAAATCACTTAGTTACTTGATAATTTATTATATAATAATATTTTTTTTACATGAAATTATCCCTCTAAAATCACTTGGTTACTTGATCATTTATAGTTTTATACTATAATAATATTATTTTTACCTAAAATTATCCCTCTAAAATCACTTGTCCTAATAAAGATAAACATAGTCCAAGTATGTCAGTACTGGGTCGAGACATTACATATAATTGAGAAAAGAGATTGTGCAACCTAGAAGCTTCTTTAAATCCAAGCGGTTTGAATTAGAAAAGTGCAGAATTTCCCTAAATAACCTGATTCTTACCTAAATATAAAGAACAATACTTTGCGTAATCCATTTGCAGTCTGTATTTCCCCAACATTTCGGTCATCCTTTGCTTTGCTGCTTAGGGTTTTCTTCCCATTTTCAATTGATCTTAATCCTTTTCTTAATTCCCCCAATTATCAGGTTAGTTACATATTCTCTTGTTTCTTTTATGCTTTTAATTTCATATTATTTGTATTATTATGATTCTTGATGTTGATTATACAGTATCAGCATCTGTCATTTTGAAAGCGCCTTGTTCAATTTGAATTTCCTATATCTAATTTTTATTTTCTGGTGATGATTATTGTGGAGTTGTTCGATCCAGGAGTTAAGTATTTAGATGACGGAAATTTGGACTAAACTTTGTTGTTGTCTTGCTGATTTTTAGATAGTTGAATCTTATACTGAAAATCAATATTTTTTCTTGTAATGTTTGCACAGTGTACCCTTAAATTACTGGTAGAAACATCTTCATATGAAAAAAAAAACTCTGTGTTTTTTGCATTCTTTGTACATGAAAGACATGTTATAATTTTGATTGTTACTTCATTCAATTTTGTTTCTATCCTGCGATCCAGTTCTATTGATCCAATTCTATCCCCTTCATCGATCCTTAGTGGGATCCGATACTGACAACTGATGCGATAGTATGTTGATTTTGATGAATATTTGTGTTTATGATTACAACTAGCAATGATTAGGGTTGTGCGAACTATTATTTTGGGGGTATGTCAAAGTTTATGCAAGAGCTGTACTAGGATGCCTATGCACAATTAGAATAACTGTCAGTCTGCCACATTTAGTAGAATTATATCGTAAAGCATCCCCTTGTGACTTGCAGAATCGTTGTTGTCCTTTTTCATAGTAGTGCTGCTCATGGACTACAGAAATGCCTTATAAATAAAATTCAAGACCTGAGCTATCATATAAAAGTTTAATGTTTTCATACAGTTATGACGACTTAAGACTTGAGATGTTATGAACGTTCGGTTCTATTTCTAGAGGTAGATCTTGTAGAGAGTTGTAGGGGATGGTGTTAATTACACACTGCACAGTGTCATCATTTTGATTACACTGACAAGCAAAGCTACCGGCCTACCACAGTCACAAGAGCTTATCCGTTACTGTGTAGTTTGTGTCTGCAGTGGAATGTTCATGCTGCAGTTAGTTTTGTTTCGAATCTTTGCTATGATCATGCATTCTTTACAGATTACTTTGCTTGACAGTTGAATTAAAAGGAAGGTGGTTAAAGTGTAGTGCTTTGACTCACATGAAAATCTCGATATGGACATTGTAGTGCCTTAAGTAAAAGGATTATTGGAATCTATGACAGTTAACTAACCATTGCCCATCTTACCTTTTCACATTTTGCAACATTGCTTTCTTTTAGCAACAAATGGGGTTCTCTCGATTAAACATTTGAATAATGAGGTTTGGGACTTGTAAGCAGATTTTTTGGTGCTGATATAGATTTATATGGCATACTTCACTGAAGGGGTTATGGTTCCTATTTTGGTGAGGGCAATATTGCTGTGAGCCTGTGATGATGCAAAGTTTTTCTGTATATATGTTTTTAATTTCTTAAAAGTGTTGCTGCTTTGATGAGTTTGTTTCTTGA

mRNA sequence

ATGATAATCACAAGATTTTTGCACCCTCGAGCTGCAATACCGCTCTCAAACTCTACTCTTAATCTCTCTTCTAAACTCCAATCTTACCTCCCTAATCATGTTCATACTCATTTCAACAATCATCTTCCCGGGTCCATTCTGAATTTTCGGGCCCATTTCTTCTTCTCCTCCTTACCAGAAAATGCGATGGCCGGGAAAGTTCAACCAGATACTGGGAAATCGCCGGAGACAGAGCTTCCGGTGTGTCTCCAGCGAGAGCTGATGCCAGGACACGTGGCGCTGATATTGGATGGGAATAGGAGATGGGCTGAGCTTAGAGGGCTTGGTTCTGAGGCGGGTCATGAGGCTGGGCTTAAGACTTTGCTTCAAGTAATGGGCTTGTGTGTTAAATGGGGCATCAAAGTTGCCACCTTTTTCTTGTTCTCGTCTGAAAATTGGAGTCGCCCCAAATGTTGCTGCTTTGATGAGTTTGTTTCTTGA

Coding sequence (CDS)

ATGATAATCACAAGATTTTTGCACCCTCGAGCTGCAATACCGCTCTCAAACTCTACTCTTAATCTCTCTTCTAAACTCCAATCTTACCTCCCTAATCATGTTCATACTCATTTCAACAATCATCTTCCCGGGTCCATTCTGAATTTTCGGGCCCATTTCTTCTTCTCCTCCTTACCAGAAAATGCGATGGCCGGGAAAGTTCAACCAGATACTGGGAAATCGCCGGAGACAGAGCTTCCGGTGTGTCTCCAGCGAGAGCTGATGCCAGGACACGTGGCGCTGATATTGGATGGGAATAGGAGATGGGCTGAGCTTAGAGGGCTTGGTTCTGAGGCGGGTCATGAGGCTGGGCTTAAGACTTTGCTTCAAGTAATGGGCTTGTGTGTTAAATGGGGCATCAAAGTTGCCACCTTTTTCTTGTTCTCGTCTGAAAATTGGAGTCGCCCCAAATGTTGCTGCTTTGATGAGTTTGTTTCTTGA

Protein sequence

MIITRFLHPRAAIPLSNSTLNLSSKLQSYLPNHVHTHFNNHLPGSILNFRAHFFFSSLPENAMAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFSSENWSRPKCCCFDEFVS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17418.1Spo17418.1mRNA


Homology
[Close]
BLAST of Spo17418.1 vs. NCBI nr
Match: gi|902231364|gb|KNA22241.1| (hypothetical protein SOVF_035890 [Spinacia oleracea])

HSP 1 Score: 187.6 bits (475), Expect = 1.700e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

		  

Query: 63  MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL 122
           MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL
Sbjct: 1   MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL 60

Query: 123 QVMGLCVKWGIKVATFFLFSSENWSRPK 151
           QVMGLCVKWGIKVATFFLFSSENWSRPK
Sbjct: 61  QVMGLCVKWGIKVATFFLFSSENWSRPK 88
[Close]
BLAST of Spo17418.1 vs. NCBI nr
Match: gi|731349153|ref|XP_010685851.1| (PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 157.5 bits (397), Expect = 1.900e-35
Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 1 

		  

Query: 2   IITRFLHPRAAIPLSNSTLNLSSKLQSYLPNHVHTHFNNHLPGSILNFRAH-FFFSSLPE 61
           +++RF+ P+    LS S  NLS KL+           N+HL G   + RAH F  ++  E
Sbjct: 1   MLSRFILPQTISSLSISAHNLSPKLK---------FLNHHLVGPTSSLRAHSFLLTTSAE 60

Query: 62  NAMAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKT 121
           N    K + + G S  T+ P  L+RELMPGHVA+ILDGN+RWAELRGL S AGH+AGLK 
Sbjct: 61  NETVAKDERNVGNSSATDFPAELRRELMPGHVAMILDGNKRWAELRGLESVAGHDAGLKA 120

Query: 122 LLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           LL+VMGLC KW IKVATFFLFSSENW RPK
Sbjct: 121 LLEVMGLCCKWAIKVATFFLFSSENWRRPK 141
[Close]
BLAST of Spo17418.1 vs. NCBI nr
Match: gi|1021039433|gb|KZM97214.1| (hypothetical protein DCAR_015424 [Daucus carota subsp. sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.700e-20
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 1 

		  

Query: 63  MAGKVQPDTGKSPETE---LPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLK 122
           +AGK     G SPE E   +P  L+RELMP HVA+I+DGNRRWA +RGL S +G+EAG++
Sbjct: 47  LAGKNYSGAGASPEEERSSIPDGLRRELMPEHVAVIMDGNRRWARMRGLPSGSGYEAGIR 106

Query: 123 TLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
               ++ LC KWGI+V T F FSS+NW RPK
Sbjct: 107 AFRVLVELCCKWGIRVLTVFAFSSDNWVRPK 137
[Close]
BLAST of Spo17418.1 vs. NCBI nr
Match: gi|902240175|gb|KNA25910.1| (hypothetical protein SOVF_002320 [Spinacia oleracea])

HSP 1 Score: 107.5 bits (267), Expect = 2.200e-20
Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 

		  

Query: 39  NNHLPGSILNFRAHFFFSSLPENAMAGKVQPDTGKSPETELPVCLQRELMPGHVALILDG 98
           +N L   + +FR     + L     A KV P   +  E ELP  LQRE MP HVA+I+DG
Sbjct: 89  DNWLRSKVASFR-----NRLGGXPTASKVGPAEAEEEEVELPAGLQREAMPRHVAVIMDG 148

Query: 99  NRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           N RWA+ RGL    GHEAG+++L Q++ LC KWGIKV T F FS +NW RP+
Sbjct: 149 NVRWAKQRGLPGGMGHEAGVRSLRQMVELCGKWGIKVLTVFAFSYDNWVRPQ 195
[Close]
BLAST of Spo17418.1 vs. NCBI nr
Match: gi|731348591|ref|XP_010685566.1| (PREDICTED: dehydrodolichyl diphosphate synthase 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.9 bits (263), Expect = 6.500e-20
Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 1 

		  

Query: 32  NHVHTHFNNHLPGSILNFRAHFFFSSLPENAMAGKVQPDTGKSPETELPVCLQRELMPGH 91
           NH+  HFN +L  S        F + LP  A +              LP  L+RE MP H
Sbjct: 24  NHLFLHFNPNLSSSSTTK----FNNKLPFVAASAASTASQVAEEAVGLPPGLRREAMPRH 83

Query: 92  VALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           VA+I+DGN RWA+ RGL S AGHEAG+++L Q++ LCVKWGIKV T F FS +NW RP+
Sbjct: 84  VAVIMDGNVRWAKQRGLPSGAGHEAGVRSLRQMVELCVKWGIKVLTVFAFSYDNWVRPQ 138
[Close]
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRR7_SPIOL (Alkyl transferase OS=Spinacia oleracea GN=SOVF_035890 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.200e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

		  

Query: 63  MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL 122
           MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL
Sbjct: 1   MAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLL 60

Query: 123 QVMGLCVKWGIKVATFFLFSSENWSRPK 151
           QVMGLCVKWGIKVATFFLFSSENWSRPK
Sbjct: 61  QVMGLCVKWGIKVATFFLFSSENWSRPK 88
[Close]
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQP1_BETVU (Alkyl transferase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174710 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.300e-35
Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 1 

		  

Query: 2   IITRFLHPRAAIPLSNSTLNLSSKLQSYLPNHVHTHFNNHLPGSILNFRAH-FFFSSLPE 61
           +++RF+ P+    LS S  NLS KL+           N+HL G   + RAH F  ++  E
Sbjct: 1   MLSRFILPQTISSLSISAHNLSPKLK---------FLNHHLVGPTSSLRAHSFLLTTSAE 60

Query: 62  NAMAGKVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKT 121
           N    K + + G S  T+ P  L+RELMPGHVA+ILDGN+RWAELRGL S AGH+AGLK 
Sbjct: 61  NETVAKDERNVGNSSATDFPAELRRELMPGHVAMILDGNKRWAELRGLESVAGHDAGLKA 120

Query: 122 LLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           LL+VMGLC KW IKVATFFLFSSENW RPK
Sbjct: 121 LLEVMGLCCKWAIKVATFFLFSSENWRRPK 141
[Close]
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Match: A0A165AAU7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015424 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.200e-20
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 1 

		  

Query: 63  MAGKVQPDTGKSPETE---LPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLK 122
           +AGK     G SPE E   +P  L+RELMP HVA+I+DGNRRWA +RGL S +G+EAG++
Sbjct: 47  LAGKNYSGAGASPEEERSSIPDGLRRELMPEHVAVIMDGNRRWARMRGLPSGSGYEAGIR 106

Query: 123 TLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
               ++ LC KWGI+V T F FSS+NW RPK
Sbjct: 107 AFRVLVELCCKWGIRVLTVFAFSSDNWVRPK 137
[Close]
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2D6_SPIOL (Alkyl transferase OS=Spinacia oleracea GN=SOVF_002320 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.600e-20
Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 

		  

Query: 39  NNHLPGSILNFRAHFFFSSLPENAMAGKVQPDTGKSPETELPVCLQRELMPGHVALILDG 98
           +N L   + +FR     + L     A KV P   +  E ELP  LQRE MP HVA+I+DG
Sbjct: 89  DNWLRSKVASFR-----NRLGGXPTASKVGPAEAEEEEVELPAGLQREAMPRHVAVIMDG 148

Query: 99  NRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           N RWA+ RGL    GHEAG+++L Q++ LC KWGIKV T F FS +NW RP+
Sbjct: 149 NVRWAKQRGLPGGMGHEAGVRSLRQMVELCGKWGIKVLTVFAFSYDNWVRPQ 195
[Close]
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU46_BETVU (Alkyl transferase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172260 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.600e-20
Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 1 

		  

Query: 32  NHVHTHFNNHLPGSILNFRAHFFFSSLPENAMAGKVQPDTGKSPETELPVCLQRELMPGH 91
           NH+  HFN +L  S        F + LP  A +              LP  L+RE MP H
Sbjct: 24  NHLFLHFNPNLSSSSTTK----FNNKLPFVAASAASTASQVAEEAVGLPPGLRREAMPRH 83

Query: 92  VALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFSSENWSRPK 151
           VA+I+DGN RWA+ RGL S AGHEAG+++L Q++ LCVKWGIKV T F FS +NW RP+
Sbjct: 84  VAVIMDGNVRWAKQRGLPSGAGHEAGVRSLRQMVELCVKWGIKVLTVFAFSYDNWVRPQ 138
[Close]
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Match: DDPS2_ARATH (Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 6.100e-18
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1 

		  

Query: 71  TGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVK 130
           T    E  LP  L  ELMP HVA+I+DGN RWA+ RGL    GH AG++ L +++ LC K
Sbjct: 60  TAAEEEETLPEELHAELMPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGK 119

Query: 131 WGIKVATFFLFSSENWSRPK 151
           WGI+V T F FS++NW RP+
Sbjct: 120 WGIQVLTVFAFSTDNWIRPR 139
[Close]
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Match: DDPS4_ARATH (Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana GN=At5g58782 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.800e-17
Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1 

		  

Query: 66  KVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVM 125
           K+   T    E E P  LQRELMP HVA+I+DGNRRWA+  GL +  G+EAG K LL+  
Sbjct: 35  KIDKGTYVVGEEETPKELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFA 94

Query: 126 GLCVKWGIKVATFFLFSSENWSRPK 151
            LC K GI   + F FS+ENW R K
Sbjct: 95  DLCFKLGINTVSAFAFSTENWGRHK 119
[Close]
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Match: DDPS1_ARATH (Dehydrodolichyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=DPS PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.000e-16
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1 

		  

Query: 83  LQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFS 142
           LQRELMP HVA ILDGNRRWA+  GL +  GHEAG K L+ +  LC + G+   + F FS
Sbjct: 65  LQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFS 124

Query: 143 SENWSRPK 151
           +ENW R K
Sbjct: 125 TENWGRDK 132
[Close]
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Match: DDPS3_ARATH (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana GN=At5g58780 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.600e-16
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1 

		  

Query: 83  LQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFS 142
           LQRELMP HVA+I+DGNRRWA+  GL +  GHEAG K L++   LC K GI   + F FS
Sbjct: 65  LQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFS 124

Query: 143 SENWSRPK 151
           +ENW R K
Sbjct: 125 TENWGRHK 132
[Close]
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Match: ISPT1_NOSS1 (Isoprenyl transferase 1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=uppS1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 1 

		  

Query: 78  ELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVAT 137
           ELP+ L+REL+P HVA+I+DGN RWA+ +GL    GH+ G+  L  ++  C  WGI+  T
Sbjct: 10  ELPLDLKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALT 69

Query: 138 FFLFSSENWSRPK 151
            + FS+ENW RP+
Sbjct: 70  AYAFSTENWKRPQ 82
[Close]
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Match: AT5G58770.1 (Undecaprenyl pyrophosphate synthetase family protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.400e-19
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1 

		  

Query: 71  TGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVK 130
           T    E  LP  L  ELMP HVA+I+DGN RWA+ RGL    GH AG++ L +++ LC K
Sbjct: 60  TAAEEEETLPEELHAELMPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGK 119

Query: 131 WGIKVATFFLFSSENWSRPK 151
           WGI+V T F FS++NW RP+
Sbjct: 120 WGIQVLTVFAFSTDNWIRPR 139
[Close]
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Match: AT5G58782.1 (Undecaprenyl pyrophosphate synthetase family protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.000e-18
Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1 

		  

Query: 66  KVQPDTGKSPETELPVCLQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVM 125
           K+   T    E E P  LQRELMP HVA+I+DGNRRWA+  GL +  G+EAG K LL+  
Sbjct: 35  KIDKGTYVVGEEETPKELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFA 94

Query: 126 GLCVKWGIKVATFFLFSSENWSRPK 151
            LC K GI   + F FS+ENW R K
Sbjct: 95  DLCFKLGINTVSAFAFSTENWGRHK 119
[Close]
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Match: AT2G23410.1 (cis-prenyltransferase)

HSP 1 Score: 87.0 bits (214), Expect = 1.100e-17
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1 

		  

Query: 83  LQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFS 142
           LQRELMP HVA ILDGNRRWA+  GL +  GHEAG K L+ +  LC + G+   + F FS
Sbjct: 65  LQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFS 124

Query: 143 SENWSRPK 151
           +ENW R K
Sbjct: 125 TENWGRDK 132
[Close]
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Match: AT5G58780.1 (Undecaprenyl pyrophosphate synthetase family protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.400e-17
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1 

		  

Query: 83  LQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFS 142
           LQRELMP HVA+I+DGNRRWA+  GL +  GHEAG K L++   LC K GI   + F FS
Sbjct: 65  LQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFS 124

Query: 143 SENWSRPK 151
           +ENW R K
Sbjct: 125 TENWGRHK 132
[Close]
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Match: AT2G23400.1 (Undecaprenyl pyrophosphate synthetase family protein)

HSP 1 Score: 84.3 bits (207), Expect = 7.200e-17
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1 

		  

Query: 83  LQRELMPGHVALILDGNRRWAELRGLGSEAGHEAGLKTLLQVMGLCVKWGIKVATFFLFS 142
           LQRELMP HV+ ILDGNRRWA+  GL +  GHEAG K ++++  +C + GI   + F FS
Sbjct: 31  LQRELMPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFS 90

Query: 143 SENWSRPK 151
           +ENW R K
Sbjct: 91  TENWGRDK 98
The following BLAST results are available for this feature:
BLAST of Spo17418.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902231364|gb|KNA22241.1|1.7e-44100.hypothetical protein SOVF_0358... [more]
gi|731349153|ref|XP_010685851.1|1.9e-3555.3PREDICTED: dehydrodolichyl dip... [more]
gi|1021039433|gb|KZM97214.1|1.7e-2056.0hypothetical protein DCAR_0154... [more]
gi|902240175|gb|KNA25910.1|2.2e-2049.1hypothetical protein SOVF_0023... [more]
gi|731348591|ref|XP_010685566.1|6.5e-2047.9PREDICTED: dehydrodolichyl dip... [more]
back to top
BLAST of Spo17418.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RRR7_SPIOL1.2e-44100.Alkyl transferase OS=Spinacia ... [more]
A0A0J8EQP1_BETVU1.3e-3555.3Alkyl transferase OS=Beta vulg... [more]
A0A165AAU7_DAUCA1.2e-2056.0Uncharacterized protein OS=Dau... [more]
A0A0K9S2D6_SPIOL1.6e-2049.1Alkyl transferase OS=Spinacia ... [more]
A0A0J8BU46_BETVU4.6e-2047.9Alkyl transferase OS=Beta vulg... [more]
back to top
BLAST of Spo17418.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DDPS2_ARATH6.1e-1852.5Dehydrodolichyl diphosphate sy... [more]
DDPS4_ARATH1.8e-1752.9Dehydrodolichyl diphosphate sy... [more]
DDPS1_ARATH2.0e-1657.3Dehydrodolichyl diphosphate sy... [more]
DDPS3_ARATH2.6e-1658.8Dehydrodolichyl diphosphate sy... [more]
ISPT1_NOSS11.3e-1549.3Isoprenyl transferase 1 OS=Nos... [more]
back to top
BLAST of Spo17418.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G58770.13.4e-1952.5Undecaprenyl pyrophosphate syn... [more]
AT5G58782.11.0e-1852.9Undecaprenyl pyrophosphate syn... [more]
AT2G23410.11.1e-1757.3cis-prenyltransferase[more]
AT5G58780.11.4e-1758.8Undecaprenyl pyrophosphate syn... [more]
AT2G23400.17.2e-1754.4Undecaprenyl pyrophosphate syn... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001441Decaprenyl diphosphate synthase-likeGENE3D3.40.1180.10coord: 83..150
score: 7.7
IPR001441Decaprenyl diphosphate synthase-likePANTHERPTHR10291DEHYDRODOLICHYL DIPHOSPHATE SYNTHASEcoord: 9..150
score: 1.9
IPR001441Decaprenyl diphosphate synthase-likePFAMPF01255Prenyltransfcoord: 95..150
score: 2.5
IPR001441Decaprenyl diphosphate synthase-likeunknownSSF64005Undecaprenyl diphosphate synthasecoord: 88..151
score: 2.88
NoneNo IPR availablePANTHERPTHR10291:SF6DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 1-RELATEDcoord: 9..150
score: 1.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0043547 positive regulation of GTPase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0005096 GTPase activator activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo047340.68Barchart | Table