Spo17447 (gene)

Overview
NameSpo17447
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGlutamine synthetase (6.3.1.2)
LocationSpoScf_01535 : 52469 .. 54761 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGGCAGTTTAGCGTGCAAAACAGTAAGAGAGGAGAGAGAAACAAACTGAAAAAACTTTGAGAGAGGAAGAGAGGGATAACTTAGGGTTTCATTTTTTCCCCAATTTTAAATTTCAAGTGATGAAATCGAAGCCCTAAATCTAATAATCTCGTCATGTATTGCTCCATTTCAAACCAATTCGAAATCTTTGATATCTATCGGCGATTTTGCGGTAATTTCAATTTCAAATTCAATTTTATACGATTAGTGAACTTTTTCTGGATTATTTTACGTTTTTCTATGTCGAATTGCTTGCTTCTGATTGTTGATTTTCTTAATGATTAATCTATTTGTTGATTCTTTTACCATTTTTCTGATTCTGAATTTCTTGAGATGATTAATTTTGAAATGGTGTATGTCTAACTGTTTTTGAGATTTCTGGTTTAAAGAACTCTTTTGTCATTTGCGATTCTCTGGGTTTGTTCGAAATTCACGGTAGTGGTGAATTGTTGAATCAATTGAAGTGTAGATTGATTGAATGCTCTAGGAAAATAGCTTCTACATTTGTCTTAGTCTTGGGCATCTTGGCTAGTTAGGAATAGGGTTGAACATATCTAAATTGGATCCGGTTTTAGGGCACGGCGATTGTTATTGTAGATTGTTTGCTACTTTAGTTTTCTAGGGTGCTAGCCTATTATGATGGTGCATATAAGTTCAATAATTAAGACTTTTGAAAATCTAATTTAATGGAATAGCTAAGCATAGGATCAAATCTAATCCCTGGGGTCTGGGCTGTGACTACTGACTACTATCTCATTCAGATGTTGTCAATTTTCTTTTGATCAAAATACACTTTTGATGTAATAGGTTGGCCACTATGGTTTTTTGTCTAAGCATACTGGAAAAGACACAATTAGCTCTGATTGCTCTTCAGCTGTAATTTGTACCCATAGCAGACACAATTAGCTCCTTGAAAAACAAAAACCCCTGCCCCTTAACTTTTCTCACAAGAGAGATATATAAATTAACCTTCAGAGTGCTGTATTTTCTTGTGCAGCTGATCACTGCCTCACTGGCCATGTTTCTTGTTTTTCTTCAACTCAGAGCCTATCCTGGTCTCGAGGTCTGTTACTGACCCGCATTTCATTAAAATTTCTCTTAAACAAGATGTTTTGTAAAGAATAATATTCATGTAATGAGATTTTGGATTTTCTAAGGTTCATATTACTGTGGTGTTGGTGCTGATAAATAGTTTGGACGAGACGTTTTTCTGATGCTCATTGCACAGCTTGCATGTATGCTGGAATTAACATAAGTGGAACCAATGGGGAGGTTATGCCGGGTCAGGTATTACTTCTTGCACCATTCTCACGTGTCTAACACTAATTTATGTCTGTGTTGATGTTATTTCCTAAAAGCATCTTCTATCTTGCTTCTGCAGTGTGAATTCCGAGTTAGTCCTAGTGTTGGTATTGAAGCTGGAGACCATGTCTGGTGTGCCAGATATCTTCTTGAGGTATTCTCCTGATATATGTTTGTTTGCATCTATACGGATCCCTTGCAGCCTATGTTGCTCCAGTCACTAAAACTTTTAGTATACGATGATCTTAAAAGAAGGATATATACTTGCCATAAAATCTGCAGCTATCATCATCTTATTGTCTGTTAAGGTGTTCAATCACTGCAAACCACCTCCAATAGTCAATAGGGTTAAAAACATGGAAAACAACCACTGATATCATTCTGCACCCTCTTGTACTCTCCTCCCTTTCTCACCTAATTTTCATTTTTGTGTCCATTCTGCCAGAAAACAGGCTCAAAAGCTACAATTGGGAAGGGAAATGTGCAAGCACAAGGGAGATTTTGTTTCCCATGTATTTCTTCGTGAATTTTCTACATTAAAACTTACACGTTGGAAATGGACACAGAGGGAAGAACTTGCACTCTATATAATGAACGCCATATTAAGAGTACAACTTCTTTTCTTTCACCACTGCTCACCTTAACAGCAAATCAATAATCTCTCTACAGCAGCAGTCACTCGGCATTTTATTTTTTTCCATCATGTTCTTCCCGTGTGATAATTGTGGTGGGGATTAATTATGTTGACTCTACATGTTTTTAATTTTAGTGTGTTTTTTTGACGCTAAGAGAAGTGTATACGGAGTAACATTTATAGATCTTTCTTTTTTTAGAATAGTTGTTGTGTATTATTTAAAGTTATGAGACAGTGAGACGCTTATTTGATATGACAAAAATGAAATTGAATTGTATCAATCGTTTAAAGGAGCATAAGGATGTTTTTATTTTCCA

mRNA sequence

CCGGCAGTTTAGCGTGCAAAACAGTAAGAGAGGAGAGAGAAACAAACTGAAAAAACTTTGAGAGAGGAAGAGAGGGATAACTTAGGGTTTCATTTTTTCCCCAATTTTAAATTTCAAGTGATGAAATCGAAGCCCTAAATCTAATAATCTCGTCATGTATTGCTCCATTTCAAACCAATTCGAAATCTTTGATATCTATCGGCGATTTTGCGCTGATCACTGCCTCACTGGCCATGTTTCTTGTTTTTCTTCAACTCAGAGCCTATCCTGGTCTCGAGTTTGGACGAGACGTTTTTCTGATGCTCATTGCACAGCTTGCATGTATGCTGGAATTAACATAAGTGGAACCAATGGGGAGGTTATGCCGGGTCAGTGTGAATTCCGAGTTAGTCCTAGTGTTGGTATTGAAGCTGGAGACCATGTCTGGTGTGCCAGATATCTTCTTGAGAAAACAGGCTCAAAAGCTACAATTGGGAAGGGAAATGTGCAAGCACAAGGGAGATTTTGTTTCCCATGTATTTCTTCGTGAATTTTCTACATTAAAACTTACACGTTGGAAATGGACACAGAGGGAAGAACTTGCACTCTATATAATGAACGCCATATTAAGAGTACAACTTCTTTTCTTTCACCACTGCTCACCTTAACAGCAAATCAATAATCTCTCTACAGCAGCAGTCACTCGGCATTTTATTTTTTTCCATCATGTTCTTCCCGTGTGATAATTGTGGTGGGGATTAATTATGTTGACTCTACATGTTTTTAATTTTAGTGTGTTTTTTTGACGCTAAGAGAAGTGTATACGGAGTAACATTTATAGATCTTTCTTTTTTTAGAATAGTTGTTGTGTATTATTTAAAGTTATGAGACAGTGAGACGCTTATTTGATATGACAAAAATGAAATTGAATTGTATCAATCGTTTAAAGGAGCATAAGGATGTTTTTATTTTCCA

Coding sequence (CDS)

ATGTATTGCTCCATTTCAAACCAATTCGAAATCTTTGATATCTATCGGCGATTTTGCGCTGATCACTGCCTCACTGGCCATGTTTCTTGTTTTTCTTCAACTCAGAGCCTATCCTGGTCTCGAGTTTGGACGAGACGTTTTTCTGATGCTCATTGCACAGCTTGCATGTATGCTGGAATTAACATAAGTGGAACCAATGGGGAGGTTATGCCGGGTCAGTGTGAATTCCGAGTTAGTCCTAGTGTTGGTATTGAAGCTGGAGACCATGTCTGGTGTGCCAGATATCTTCTTGAGAAAACAGGCTCAAAAGCTACAATTGGGAAGGGAAATGTGCAAGCACAAGGGAGATTTTGTTTCCCATGTATTTCTTCGTGA

Protein sequence

MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFPCISS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17447.1Spo17447.1mRNA


Homology
[Close]
BLAST of Spo17447.1 vs. NCBI nr
Match: gi|902234709|gb|KNA23547.1| (hypothetical protein SOVF_023830 [Spinacia oleracea])

HSP 1 Score: 272.7 bits (696), Expect = 3.200e-70
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1 

		  

Query: 1   MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI 60
           MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI
Sbjct: 1   MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI 60

Query: 61  NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP 120
           NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP
Sbjct: 61  NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP 120

Query: 121 CISS 125
           CISS
Sbjct: 121 CISS 124
[Close]
BLAST of Spo17447.1 vs. NCBI nr
Match: gi|297801088|ref|XP_002868428.1| (hypothetical protein ARALYDRAFT_493621 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 109.0 bits (271), Expect = 6.000e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 222 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 281

Query: 101 GSKATI 107
             +A +
Sbjct: 282 TEQAGV 287
[Close]
BLAST of Spo17447.1 vs. NCBI nr
Match: gi|727518152|ref|XP_010435449.1| (PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like isoform X3 [Camelina sativa])

HSP 1 Score: 109.0 bits (271), Expect = 6.000e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 223 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 282

Query: 101 GSKATI 107
             +A +
Sbjct: 283 TEQAGV 288
[Close]
BLAST of Spo17447.1 vs. NCBI nr
Match: gi|565439707|ref|XP_006282617.1| (hypothetical protein CARUB_v10004865mg [Capsella rubella])

HSP 1 Score: 109.0 bits (271), Expect = 6.000e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 222 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 281

Query: 101 GSKATI 107
             +A +
Sbjct: 282 TEQAGV 287
[Close]
BLAST of Spo17447.1 vs. NCBI nr
Match: gi|15238559|ref|NP_198413.1| (glutamine synthetase 2 [Arabidopsis thaliana])

HSP 1 Score: 109.0 bits (271), Expect = 6.000e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 223 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 282

Query: 101 GSKATI 107
             +A +
Sbjct: 283 TEQAGV 288
[Close]
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXF3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_023830 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.200e-70
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1 

		  

Query: 1   MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI 60
           MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI
Sbjct: 1   MYCSISNQFEIFDIYRRFCADHCLTGHVSCFSSTQSLSWSRVWTRRFSDAHCTACMYAGI 60

Query: 61  NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP 120
           NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP
Sbjct: 61  NISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKATIGKGNVQAQGRFCFP 120

Query: 121 CISS 125
           CISS
Sbjct: 121 CISS 124
[Close]
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Match: R0GT89_9BRAS (Glutamine synthetase OS=Capsella rubella GN=CARUB_v10004865mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.200e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 222 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 281

Query: 101 GSKATI 107
             +A +
Sbjct: 282 TEQAGV 287
[Close]
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Match: B9DGD1_ARATH (Glutamine synthetase OS=Arabidopsis thaliana GN=At5g35630 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.200e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 223 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 282

Query: 101 GSKATI 107
             +A +
Sbjct: 283 TEQAGV 288
[Close]
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Match: D7MHT9_ARALL (Glutamine synthetase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493621 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.200e-21
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 222 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 281

Query: 101 GSKATI 107
             +A +
Sbjct: 282 TEQAGV 287
[Close]
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Match: M4F2U3_BRARP (Glutamine synthetase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.400e-21
Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 1 

		  

Query: 43  WTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGS 102
           W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGIEAGDHVWCARYLLE+   
Sbjct: 223 WGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITE 282

Query: 103 KATI 107
           +A +
Sbjct: 283 QAGV 286
[Close]
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.800e-23
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 223 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 282

Query: 101 GSKATI 107
             +A +
Sbjct: 283 TEQAGV 288
[Close]
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.400e-23
Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 1 

		  

Query: 43  WTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGS 102
           W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGIEAGDHVWCARYLLE+   
Sbjct: 223 WGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITE 282

Query: 103 KATI 107
           +A +
Sbjct: 283 QAGV 286
[Close]
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.300e-22
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 1 

		  

Query: 45  RRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKA 104
           R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGIEAGDH+WCARYLLE+   +A
Sbjct: 229 RDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQA 288

Query: 105 TI 107
            +
Sbjct: 289 GV 290
[Close]
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.700e-20
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 1 

		  

Query: 45  RRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKA 104
           R  SDAH  AC+YAGINISGTNGEVMPGQ E++V PSVGIEAGDH+W +RY+LE+   +A
Sbjct: 225 RDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQA 284

Query: 105 TI 107
            +
Sbjct: 285 GV 286
[Close]
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.100e-19
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 1 

		  

Query: 45  RRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKTGSKA 104
           R  SDAH  AC+YAGINISGTNGEVMPGQ E++V PSVGIEAGDH+W +RY+LE+   +A
Sbjct: 225 RDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQA 284

Query: 105 TI 107
            +
Sbjct: 285 GV 286
[Close]
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Match: AT5G35630.1 (glutamine synthetase 2)

HSP 1 Score: 109.0 bits (271), Expect = 2.100e-24
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEKT 100
           ++W R  SDAH  AC+YAGINISGTNGEVMPGQ EF+V PSVGI+AGDHVWCARYLLE+ 
Sbjct: 223 KIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERI 282

Query: 101 GSKATI 107
             +A +
Sbjct: 283 TEQAGV 288
[Close]
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Match: AT5G16570.1 (glutamine synthetase 1;4)

HSP 1 Score: 86.3 bits (212), Expect = 1.500e-17
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEK 100
           + + R   D+H  AC+YAGIN+SGTNGEVMPGQ EF+V P+VGI A D VW ARY+LE+
Sbjct: 165 KAFGRDIVDSHYKACLYAGINVSGTNGEVMPGQWEFQVGPTVGIAAADQVWVARYILER 223
[Close]
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Match: AT5G37600.1 (glutamine synthase clone R1)

HSP 1 Score: 83.6 bits (205), Expect = 9.600e-17
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 1 

		  

Query: 49  DAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEK 100
           D+H  AC+YAGINISG NGEVMPGQ EF+V P+VGI A D +W ARY+LE+
Sbjct: 173 DSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAADEIWVARYILER 223
[Close]
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Match: AT1G66200.3 (glutamine synthase clone F11)

HSP 1 Score: 82.8 bits (203), Expect = 1.600e-16
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 1 

		  

Query: 36  SLSWSRVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARY 95
           S+   + + R   DAH  A +YAGINISG NGEVMPGQ EF+V PSVGI A D +W ARY
Sbjct: 169 SIGADKSFGRDIVDAHYKASLYAGINISGINGEVMPGQWEFQVGPSVGISAADEIWIARY 228

Query: 96  LLEK 100
           +LE+
Sbjct: 229 ILER 232
[Close]
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Match: AT1G48470.1 (glutamine synthetase 1;5)

HSP 1 Score: 82.4 bits (202), Expect = 2.100e-16
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 

		  

Query: 41  RVWTRRFSDAHCTACMYAGINISGTNGEVMPGQCEFRVSPSVGIEAGDHVWCARYLLEK 100
           + + R   DAH  AC+Y+G++I G NGEVMPGQ EF++SP+VGI AGD +W ARY+LE+
Sbjct: 165 KAFGRDIVDAHYKACLYSGLSIGGANGEVMPGQWEFQISPTVGIGAGDQLWVARYILER 223
The following BLAST results are available for this feature:
BLAST of Spo17447.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234709|gb|KNA23547.1|3.2e-70100.hypothetical protein SOVF_0238... [more]
gi|297801088|ref|XP_002868428.1|6.0e-2171.2hypothetical protein ARALYDRAF... [more]
gi|727518152|ref|XP_010435449.1|6.0e-2171.2PREDICTED: glutamine synthetas... [more]
gi|565439707|ref|XP_006282617.1|6.0e-2171.2hypothetical protein CARUB_v10... [more]
gi|15238559|ref|NP_198413.1|6.0e-2171.2glutamine synthetase 2 [Arabid... [more]
back to top
BLAST of Spo17447.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXF3_SPIOL2.2e-70100.Uncharacterized protein OS=Spi... [more]
R0GT89_9BRAS4.2e-2171.2Glutamine synthetase OS=Capsel... [more]
B9DGD1_ARATH4.2e-2171.2Glutamine synthetase OS=Arabid... [more]
D7MHT9_ARALL4.2e-2171.2Glutamine synthetase OS=Arabid... [more]
M4F2U3_BRARP9.4e-2175.0Glutamine synthetase OS=Brassi... [more]
back to top
BLAST of Spo17447.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GLNA2_ARATH3.8e-2371.2Glutamine synthetase, chloropl... [more]
GLNAC_BRANA8.4e-2375.0Glutamine synthetase, chloropl... [more]
GLNA2_DAUCA9.3e-2274.1Glutamine synthetase, chloropl... [more]
GLNA2_MEDSA8.7e-2067.7Glutamine synthetase leaf isoz... [more]
GLNA2_ORYSJ1.1e-1967.7Glutamine synthetase, chloropl... [more]
back to top
BLAST of Spo17447.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G35630.12.1e-2471.2glutamine synthetase 2[more]
AT5G16570.11.5e-1762.7glutamine synthetase 1;4[more]
AT5G37600.19.6e-1768.6glutamine synthase clone R1[more]
AT1G66200.31.6e-1659.3glutamine synthase clone F11[more]
AT1G48470.12.1e-1657.6glutamine synthetase 1;5[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 44..103
score: 1.0
NoneNo IPR availablePANTHERPTHR20852GLUTAMINE SYNTHETASEcoord: 41..98
score: 2.0
NoneNo IPR availablePANTHERPTHR20852:SF53GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 41..98
score: 2.0
NoneNo IPR availableunknownSSF55931Glutamine synthetase/guanido kinasecoord: 22..103
score: 5.49

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007568 aging
biological_process GO:0009749 response to glucose
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0019676 ammonia assimilation cycle
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0032259 methylation
biological_process GO:0006833 water transport
biological_process GO:0009744 response to sucrose
biological_process GO:0009651 response to salt stress
biological_process GO:0010114 response to red light
biological_process GO:0006810 transport
biological_process GO:0009644 response to high light intensity
biological_process GO:0009750 response to fructose
biological_process GO:0010218 response to far red light
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009252 peptidoglycan biosynthetic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009409 response to cold
biological_process GO:0009735 response to cytokinin
biological_process GO:0008152 metabolic process
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0048046 apoplast
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004356 glutamate-ammonia ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008168 methyltransferase activity
RNA-Seq Expression