Spo17449 (gene)

Overview
NameSpo17449
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLA-related protein 6 LA RNA-binding domain protein
LocationSuper_scaffold_189 : 285923 .. 295335 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAAAAAAATTATATAAAAAAAAAAACTCCCAAATAAACACCAACGCCGAACTAGACTGTCTCCTCATAAAATAAAACACACCCAAACGCACAACACTCTTGAGAAGAGACAGGCCGAAGGTATGGCCGCCGCCGCCACCAACACCACCGTCGTTAATTTCCATGTCAAAATCAACAAATTCTGAAAATCTCTCTTTTTTGTCTCCATCATTCCGCATCCTATTAAATTAAATTTTTTTTAAGAATCAATTCTTTTTGTTTTATTTATAAAAAAAATTCTTTGCCAGCCCTAATTTGGGATGGCGACGACAGCACCAACGACGGTGGCGGCGGAGGATTCGACTATGAGCAACAACTCACCACGTAGTCCTGTCAAGCAACGTGGTGTCCTTCCCTCGCCGTGGGCTCAGGTTGTTGTTAGAGGCGTTGGAGAATTACCGGAAAAGACAGAATCGTCTCCACCGGATATTTTACCGTCGACTGAGGGCAATGTAGCTAAAAAAGCTGCTTGGAATAAGCCGATTTCTCCTCCGCCTCTTCCTTCTCCTCCTGGTGGTGATCACGGTGTTGTTATGGGCGCCGCCGCCTGGCCCGCTTTATCAGAGTCGACTCGGCCTCTCTTTAAACCGACGCCGTCGTCTTCCGATTCTCCGAAATCTACCCCTGAAGTTTCTGGCCCTGTTTCTCAGGTATCTGGCTCTACTTTCTTTTGATTGTAATTATTTTAATTTTTTGAATTCATATTTGATTAGTTTTGATTATAGGAAGAAAAAAGGTTGAATATTTGGTATTAAATAGTGATTTTAGGTGTTGAGGGTTTTGTTTGTTTTTGTTGATCAAATGATAATTACGTTTTAACAAACATATTAATTGCTGGAAGGTGTTTATTTTCGGTTAATTAATTAAGATTCTTCAGACAATTATGGTTATGCATGTACTCCGTATTAGCGATTCATGTAAATTGAAAATTTGTTTTGCTATTGTTTATTTTTGTTGAAGTTTACTTCATGATATTCTTTGTCTTTCGATAGACTGTATTTTCAATGGTTTCGTGGGTATTATACACATTGTTTTCCGGTTGTTCATGTTTATGAAGTCTTGAATTTACAAGGATGTGTTTTATTGTTTGAGTGATTCTGTTGATTATTGTAAACCTTGAAGAAATGTTTATGATTCCAACAGTGTTAAGTATAAACACCGAAGGTATTGTGTATATTCGGATTGTGCACGTGAAGCTAGTTATTGATTTGTTGTCTTTAAAGGGATTGGTTTTTCTGACTTGTGTTGATTACAGGGACTCATTACTTCACATTCACAACATCCTAACCAAGGTAGTGCTAGCACTAATCACAATTCTAGCATAAATAGTGCTGCACCCACAAGACAGAGATCAATGAAGCGTGGTGGTGGTGGTGGCAAACAAGGTGGTTTTTCTCGAGGCCCTACACCTCCTTCGCCATTGCAAGCACTTCCAGTTCCTGAAATGGCGCAGAGTGGTTTTAACAAAGTAGGGCCGGGTGCAGGGCCTGACTCATCTTTTAGAGAGACTAGGCCAACCGGAGGGTTTGCATCTCACACAAATACATCAAATGAGAACTACAGTCAAAGAAGTTCAAACCGGCGAGGAAATTATGGGCAACATGGCCGTGGAGATGCGAGGAACCACTACCAAGGAGGTAGGCGTGATCAGGATCACGGGAATCATGATTGGGGCTCATCTCCTAGTTCACATGCAAGGGGTTCATATGGACATCATCATAGGCCTCATGGCCGGGGTTTTATGGGCCCTTCAGTACAAGGGGCTTCACCATTCGCTCCTCCTCCTCCTGTGAGACCTTATGGGAATGCCTTTGTATATGGTAAGATTTGAGACATTCTTGCTTCTAAAACTTTAGATTTTATTTATTTTTCTATTTGTTTTGTTTAATATATTGACATATATTTTTTATAATTTTCTCCTTCTTGTCTTAACATAGATCCTGCTGTGGTCTATCTTGTTCCACCGGAGTACTTCAGGGGAATGCCTTATGTCACTGGTCCACCACCTCCATCTTATCTCGTTCAATCAGACCCCATGCGTCTTTCTATTATCCATCAGATCGAGTACTATTTCAGGTACCATTACCAGTAAACTTTGTAGTTCCTTCGCTAGCTATAACTTTGTCATTTCCATACTTTTGTGTGATTTATTATTGCATTTGAAATTTGCAGTGATGCTAATTTGGTGAAAGATGAGTACTTGAGGTCCAAGATGGATGAACAGGGATGGGTTCCTATAACCTTAATTGCTAACTTCCCTCGAGTAAGTTGTGTTGCAATTTTGTGCACTTTTATTTCCTTTTAATACTAATTTCCTGTGTTTGAAAGAGTTGATGTCATAATTGTTCATATTTCATCATATTGTGCATAAGGTTGATATCTTAATGCGGCTTTCTTTTGTCTTGTGAAGTAGTGTGTATTATTTGCTTGTATAGGTAATTAATCATTAGTGTGGTGTTGGTCAGCTTGCAAATACGCAAAGTGTGCTTGTTTCTCTACATGTTATTTCGGTAATTTGGTCGAATTATCCAAATGGTGCATTTCACCTAGGTATTGCTTGTATAATGGCATTCCTAATTTTCTTAACACAAGATCTTGTTCATAATGCCTTCTCAAAGATCCTACGTGGTTGGCTGATGTAATGCCGGACCAGCTAGTCTGAGAGGGAAAAAAGAAAGATAGGTCAGAATGTAGGATTGATATTACTTTATTCTCAACCTAGAAATGTCATTAGTTTTGATGTACTGGAGGTTGGTTTCGGTATTTTATTGATCAGAATGAAATCGAGTCCTGTTTTCGGTTATCTGAATGACTTGTAGTCATACAACAATCCTCTATATTTTCTGGTCATTGTCTTGGTATGTTTGTATTTTTAGTTGATGATAAGTTGATCCACCTCGCTTTTAGACAATTCGTGAATCTTGCATTTTGTTAATAATATTAGATCCTTATTGTTATTACTTAAAGATTGTCTTTAGCATGTAACAATTGCATCAGTTTTGCTACTGAACATTTTTTTGTGTCAGCTTTCATATTATAGTTTGATGTTCAAATGGTTTGATTTTTTCTTGATATTGTTTACCAAGTACTATCCTGTATTCTTGTTTATAACTTCCGTCATGTATGTAACAATTCTTAACATGTTTTACAAAATAAGAATGTCAATGCTCGTATAATCATTTTCATATGGTCAAGCCCACTTTTAGGTTGTTTTTCTCTTTTCCTTTTAGTAAACTATGAGTATCGAAGGACCCTAAGGCTTAGTGTGCATTTGCCTACGTTTCTCACAACAGACCCCCCTCCCCCCCAATTGGCATGGTACGGGATGTTGTATGGGAGTAGGTGGGGGAAGAACTGTCATTTTTGCTGCTGGCAGGTGACTCTGACATCTATTAGTGTTTTTAATATAGAAACGAGAAGAAGTTGCAATTGTTGTTCATTTTGTTGTACTCAAGACCGAGGAGGTATGAAATGAATGAAAAATCCACCAAGGCGTCAAACTGCATTAATATTAAGCACAATGATTCATAATTTAAGATGGAATAGAGACTGAGTGCTTAACATTTTGGAGATTGATGATGATGCTTTTGTAGTTGATATTTTGAAAAGAGGAGAAAAAGGGATTTGGATTTTAAAAGATATTCTGTACTAGCTAGAATCGGTGGGCATAATTTGGTATTGTGATGTTGTTTGCATGCATATTAACTAGCTTATATCTTCATTTGGTGAGTGTAAGAGTTTTTATGGGTGTTCTTTGGTCGCTTTATTGAATGTGGGTGAGGTTGTGTGATTCGTGTTTTCTTTCTCATTCACGCGTTGAGTTTTCTGCCTTCTGGGCCTTTGGGTGTTTAAAGGTGTCTTAACTCGTAGTGTGTGAGCTGGCTGCTCATTTCCTTAAGATAATTTAATTAGCAAGAATAAAATCTATAAATATTGTTAAGAGTATGGAAGGCGTTGTTTAGCAATGGTCCTCACACATGGAAACAGAAAAGGGGTAGATTGCCTAGTCTCTGGGAAGTGTTTGGATTGATAAAGCTTTTCACTCTAGTAAGCAATATTAAGTCGAATTTGTTATTTAAAATAGATTTATTCTTGTGAAATTAGAGAATATACCACTTTGTTCTCTGCAAAGGAGCAAGCATTGGATTAGGAAGGACTGACTATTTACGTCAATGGGGTCTAGCTGGGAAACATCAAAGTCAGAATTCCTTGATATCCCTGAACGTTGGTTTATTTTTGGGCTATCTAATTTTGAATTCCCCTTAGTCTCAAAAGCTCATGTGTCATGATGTGTAAGGCAATTAATAGCAGTTACCATGTCTGTGGCTCAGCATCCATTATCAACTTCTACAGGGTTCAAAAATTAATCTAGGGTGGCTTCTTAAGTGTCACATAGTTATGGGATTTTTTTATACTTAGTCTTAAGTTTATTCTAAGATGGTGCTTAGATAGACTCATGATCTTTGGATGTCCATTGAAAAGCTAAATTGTTATTAAAACAGTGCCTGAGACCTCTAGCTTTGCATTTATGTTATTACATAAAGTCTATTTTACCTAAACTTCTTTTTATATATTTTGTGCACTAAAGCTTTCATATTCGTCTTTTTTAGTACCTAGAAACATGTGCATTCAGGAAGGCTTACGTGAAGTCCTCTAACTATTGGTGGGTAAAGGGAATTGTATTATGACTTTACATTGGGGATTATCCGTCAAGGTTTGCTTTTGATGTGTGTTATATTGAAATACTACCTGATGAGAGTTGTTGTAGGTTTTACATCTAGGATGTTTTGATGACTGTATGTTAATCTAATTCGTGAGATGAAGGAATGTAGCTGAACTGCTGGTACGGTGAACAGTTAATTGTGAGCAATGAACCACACTTGATTTTGTGTTATTTTGTTATTTATTAGGTACTCCCTCGGAATTTTTTTTAAGGAGTCACACTTATCATTTCCGGCCCTACTTTATTAGGAGTCACACTTCCATTTTTAGTAACTTTTCTATCCCACTTTCTAATTATTTAATATATTAATTTCCTCTAGAGACCATCATATTTAATATATTAATATAAACTCCCTCTCTACTTTGATTAAAATACTTTTCCCATCATCTTTTTTCTATTTGTTTATTACTCTTTCCTCCACTTGCTTTATTATTTTTATTAGATTCAACTCTCCTTACTTAATACGCGTGCCGGTCAACATGCGACTCCTAATAAAATACGGAGGGAGTATATTATACCACTTTACATACTGAGTGATGCTTTCATACTAAAATATGATGAACTTCAAATGAAAGGTGTTATCGTATGACCTACATACTCTGTAACATTTGCAAATATCATTTTTTCATTTTAAAGTCATGCTTCTTCTATACGTTGTTTTCTCGTCTTTGCATATCCGTTATTGATTATAAAGTGACCTATCAAGTGTATTCTTATATTTATGACATTGTTTTTAGGAAAACTTTAATGTTTTGGCCTAAGATATAGGATAATTGTAGGACAGTAGGCACATCTCAGTAATTGCATAAAGATGATTTGTGGTTTGGAATATGACCCTCCCATGTCCCAATATTCTTTGGTGATCAGTAGTTGAATTTGTCAACATATAAGTATTTGTTATGAACATCATAGGATAATTGTCTTTTTGATGTATGAACATCTAATATCCGTTTTTGTGATCACATTACCAAAAATTAACTTCTGTTGGTTGTTGGTTGGGCAATCAGGGACTGCCTAGAGGTGTAATTTTTCAAATTTCAGGCCTACATGGTGTAATATTTTGAGGCTACTGTTTCTTTTGAGTTTTTTTTCTCCCTTTTGCTTGTAACACTGGCAGCGACTGAAAGTTATAGTCACTGTTTAACATTAATGTTTTGCATTTGGTATCCGCGGTATTTATCAACTTATAAACTACCTACACTAGTTTCTTTTCCTTGATGATGTTAAGCAAGTATTTTCCAATTTATTTTTTAATGCATGTACACATACTCACATAGCATTTAATTTTAAAGGCATGTACACATAGCATTTATTTTTTAATGCATGTACAGATAGCACTTTTGGTAGCTCTAGGCATCCCTGAATGATTATTTTCCTGACATTCTGTCTCTAAATATATCATTCAAAGTTGATAAGCTTAACTTACATGGTGTAGAAGAAATAAGTGAGTGTTTGTCGGACACATTGCAAGAACTGTTATTATATAGTCAGCATAGTTTATGTTTTTGGTTGGCAAATAAATTGTTTTGTGTAAGCATTTTAATCACTTTATAGTAGATAATTAAACTTTGATTTTCTTTTCTTGAAAGTGACTGTTTTCTTGAAAAGGCTAAAATAATAACCACACACAAAAATAAATATTTTAAGGTTTTGATTGAGGGAAGTCTTGTTTCTTCTTTATACTTTAGAAAAAGGTATTTAGACGGCGGTTCGGGTTATATTTTTATTTCAGTAAGCATTGAATACTATTTATCACTAAGTGCAGGTACATCCGTACATGATTAGGATCTTGTTTAGGGTCTGACGCTAGGCTCTTCGGTGTTGGTTCTTTTGCTAGAATGACTTTCAGTGTTTCTGGTGTTGGTATATTTATCACAAAAAACTCTAGGTTGCCTCCTTTGGGCATGTAGGAAGTACGTGAAATTTTTATAGTAGTGTCATTATACTCATCGTCATTGACTGTGGGTGCTATGCTTCTTCCTCTTTGGAAACCCTTGGTTAGGGCACATATTGACAACATAAAGATATCTTGGTTAGAGAAATATGCGTATGTTGAGAGTTGAATCTTCAAATAAGAAACATATTAGTGTTCTTTCACTTTTTCAAATATTTCTTCAAAGTGGGATCTAGAAATGGATTGTGAATCTGTTGACATTTGTGCGAATGTGTATGTAACTCGGTGGTAAGAACCCTTATTTTATTTTTTAATATTATCATTGCCTCAAAGAGGCTCCCGCAAGAAGCGGTTTAGGGGGGGGGTCGGGTGTACATAACCTTACCCCTGCAATTGCATAGAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGACGACAACGGGATAACCATATTTTACTTCATGGAAAGGAAGCGAGGTTTTAAGAGTCATTTTGATTTAATCCGTTACATCCCACAGCCAAAAGAACAAATGAATCGTCGGCTCCATCAGTAATAACCCTTGTTATGTTATGGATTTTGTAAGGGTTAAATGTGATTACTTGCGTTAATGGTGTTGGTACCTTAACGTAGTAATTCTATGAGCACGGTTGTTGAAGCTTTTTTTTAGCTATTACTCTCTTCGTCCCTTTTTGTTTGCCCCATATTCCACTTTAAGGTGTCCATTTGAGATTGTTCCATACTTTAAATGGTAAGTTTCCCACTTGCTTTCTCTCCATCTCTCTCCTCATGGACCTACTTTATCAACTCATGTGCACATGTTAAATCCAATTCTAAATAAAGTGAATTTTGGCTATGAGCAATAAAAAAAAGGGGAGTACTACGTACATCGATCAGTGGACTATGGACCATGGTGTACAGTGAGAATGATGCACTAAAAGAACATATGTGCATAAGCAAAAGAACATGCGACATAATATTTCACTTTTTTGTTATAAAAAATAGTATATTATTTCACTATTTATTAAAAATATAAATAAAAATTGTATTCATGTTCTTTTAACGTAACCGCTTTTCTTTTAATTATATAATAGTGTTCTTTAGGTGCACCATGCTCACTGTGCACCATTTTTTGCATCATTATTCAGAATCTACATTATTTTCAAAGCTTCTTATACCTAAATATCGTTAGCACGGTTGGTGATATACATATTATTATTATTATTCGGAATCACTTGTTTTCTAATTAGCAAACATCTATATTACAAGTTATAGAAATAGGGTTATCTTATATTCATTGAAATGGAGTCTAGCTTTGATGTAAATATTCCATTGACTCGAAGTCATCTTACAATTTGATAATATTTTGTGTCCCATTTAAATTTTTTACGCTTCTCTTATTTCCTTTACCTTGCTTTTATTTTAGTGAATGGATGGTTTGTGAAAGTCTAGTTCTTTGTTTCAGCTATCAAAATTATGACTTGCACATTTATATAACTTATAACAAGTGAACTATCTTACGAATGCGCTTGAACTTGCTTTGCAAGGTTATTTTGTTTTTTGTTTTTGGTGTGCTTTATTTTAGAATTTCCTTTGTATAATGAAGGATCATGTGTTTATGGTTGTTGACAAGTATCGAAAACACATTATGGGTTAGTTAGAGTGACACCAAATACAATATGGGTTTCTTTATGTTGTGAGTTTTAGGATCTTTAGGTATAAGAGTTATCTTCCTTGTGTGTTGTACACTAGCAGTATATATTAACCCAAGGTGCTTTAATTCACAACTCCTTGATTAATAAAGATCCATGTTAGGTGGGAACCTGTGGCAAGTATTTTGTTAATTTTTACTCTTCGTGTTTGGCGTTTGTCTTTGGTAGGTTCAAAGTCTAACCGACAACATAAATTTTCTACTGGAGTGCTTAAAAGGATCTAGCATTGTTGAAGTACAGGTTAGTTCATGTTGGATATTTCTTCAAGTTTAACTTGGATATGCATTGTGTTGATTGTATTGGCACAAAATTGAACTTTTTTGTATTTTATTTTGTGTAGGGAGACAAAGTAAGGAGGTGTAATGATTGGATGAAATGGATAACACATCAACAGTCTCCTTCAGAATCTGGGTCACAATCCCCTGTAGGTTCTTCTTTTGATAATCTGACTACAAACATGCAGAGAATTTCATTGGAGAACCTAGACAAGGAAAAGGGATTGGGTAACAATTTGGCGGTTACAAACATGGAAGGGTCTATTCAACGTGTATGTTGAAATTTTTAGACTACTCTAAATCTCTGATTATAGATCATCAAATATAGAGTTAAAACCCCTTTTTTGATCTTATGGAGGATGAATTTTGTCAGACGGGTTTGAAGAACATTTTACATGGATTTTCTTTGTGTTTGCGCCCTGAATTTTTGTCAACAGTTTTGAAGCGGCTAAGTAAATTAACTTAGGATTTGAATCATTAATATTTTTGAAATAGTTTACTCTGGCGACTTTTATTGAGCTGTTGAATTGTATAGTTTTTTTCCGCTTATTTTTGCAAATGAATGATTTTTGTATTTGGAATTTAGATAAGAATAAATTGTGTAATGCATCAGTGAGAATATGCTAGATATGCTTTGCAATACCTTGGGAGTGCTGCTTAAGCTACATATTGGCTCACCCTTATGGCACGATGCCTGTGGGATCATGGAGAAGGATCTCGACAAATAGCTATTCCCGTGTTTTCCGTGTTAGCAATCGTCATTTC

mRNA sequence

CAAAAAAAAAAATTATATAAAAAAAAAAACTCCCAAATAAACACCAACGCCGAACTAGACTGTCTCCTCATAAAATAAAACACACCCAAACGCACAACACTCTTGAGAAGAGACAGGCCGAAGGTATGGCCGCCGCCGCCACCAACACCACCGTCGTTAATTTCCATGTCAAAATCAACAAATTCTGAAAATCTCTCTTTTTTGTCTCCATCATTCCGCATCCTATTAAATTAAATTTTTTTTAAGAATCAATTCTTTTTGTTTTATTTATAAAAAAAATTCTTTGCCAGCCCTAATTTGGGATGGCGACGACAGCACCAACGACGGTGGCGGCGGAGGATTCGACTATGAGCAACAACTCACCACGTAGTCCTGTCAAGCAACGTGGTGTCCTTCCCTCGCCGTGGGCTCAGGTTGTTGTTAGAGGCGTTGGAGAATTACCGGAAAAGACAGAATCGTCTCCACCGGATATTTTACCGTCGACTGAGGGCAATGTAGCTAAAAAAGCTGCTTGGAATAAGCCGATTTCTCCTCCGCCTCTTCCTTCTCCTCCTGGTGGTGATCACGGTGTTGTTATGGGCGCCGCCGCCTGGCCCGCTTTATCAGAGTCGACTCGGCCTCTCTTTAAACCGACGCCGTCGTCTTCCGATTCTCCGAAATCTACCCCTGAAGTTTCTGGCCCTGTTTCTCAGGGACTCATTACTTCACATTCACAACATCCTAACCAAGGTAGTGCTAGCACTAATCACAATTCTAGCATAAATAGTGCTGCACCCACAAGACAGAGATCAATGAAGCGTGGTGGTGGTGGTGGCAAACAAGGTGGTTTTTCTCGAGGCCCTACACCTCCTTCGCCATTGCAAGCACTTCCAGTTCCTGAAATGGCGCAGAGTGGTTTTAACAAAGTAGGGCCGGGTGCAGGGCCTGACTCATCTTTTAGAGAGACTAGGCCAACCGGAGGGTTTGCATCTCACACAAATACATCAAATGAGAACTACAGTCAAAGAAGTTCAAACCGGCGAGGAAATTATGGGCAACATGGCCGTGGAGATGCGAGGAACCACTACCAAGGAGGTAGGCGTGATCAGGATCACGGGAATCATGATTGGGGCTCATCTCCTAGTTCACATGCAAGGGGTTCATATGGACATCATCATAGGCCTCATGGCCGGGGTTTTATGGGCCCTTCAGTACAAGGGGCTTCACCATTCGCTCCTCCTCCTCCTGTGAGACCTTATGGGAATGCCTTTGTATATGATCCTGCTGTGGTCTATCTTGTTCCACCGGAGTACTTCAGGGGAATGCCTTATGTCACTGGTCCACCACCTCCATCTTATCTCGTTCAATCAGACCCCATGCGTCTTTCTATTATCCATCAGATCGAGTACTATTTCAGTGATGCTAATTTGGTGAAAGATGAGTACTTGAGGTCCAAGATGGATGAACAGGGATGGGTTCCTATAACCTTAATTGCTAACTTCCCTCGAGTTCAAAGTCTAACCGACAACATAAATTTTCTACTGGAGTGCTTAAAAGGATCTAGCATTGTTGAAGTACAGGGAGACAAAGTAAGGAGGTGTAATGATTGGATGAAATGGATAACACATCAACAGTCTCCTTCAGAATCTGGGTCACAATCCCCTGTAGGTTCTTCTTTTGATAATCTGACTACAAACATGCAGAGAATTTCATTGGAGAACCTAGACAAGGAAAAGGGATTGGGTAACAATTTGGCGGTTACAAACATGGAAGGGTCTATTCAACGTGTATGTTGAAATTTTTAGACTACTCTAAATCTCTGATTATAGATCATCAAATATAGAGTTAAAACCCCTTTTTTGATCTTATGGAGGATGAATTTTGTCAGACGGGTTTGAAGAACATTTTACATGGATTTTCTTTGTGTTTGCGCCCTGAATTTTTGTCAACAGTTTTGAAGCGGCTAAGTAAATTAACTTAGGATTTGAATCATTAATATTTTTGAAATAGTTTACTCTGGCGACTTTTATTGAGCTGTTGAATTGTATAGTTTTTTTCCGCTTATTTTTGCAAATGAATGATTTTTGTATTTGGAATTTAGATAAGAATAAATTGTGTAATGCATCAGTGAGAATATGCTAGATATGCTTTGCAATACCTTGGGAGTGCTGCTTAAGCTACATATTGGCTCACCCTTATGGCACGATGCCTGTGGGATCATGGAGAAGGATCTCGACAAATAGCTATTCCCGTGTTTTCCGTGTTAGCAATCGTCATTTC

Coding sequence (CDS)

ATGGCGACGACAGCACCAACGACGGTGGCGGCGGAGGATTCGACTATGAGCAACAACTCACCACGTAGTCCTGTCAAGCAACGTGGTGTCCTTCCCTCGCCGTGGGCTCAGGTTGTTGTTAGAGGCGTTGGAGAATTACCGGAAAAGACAGAATCGTCTCCACCGGATATTTTACCGTCGACTGAGGGCAATGTAGCTAAAAAAGCTGCTTGGAATAAGCCGATTTCTCCTCCGCCTCTTCCTTCTCCTCCTGGTGGTGATCACGGTGTTGTTATGGGCGCCGCCGCCTGGCCCGCTTTATCAGAGTCGACTCGGCCTCTCTTTAAACCGACGCCGTCGTCTTCCGATTCTCCGAAATCTACCCCTGAAGTTTCTGGCCCTGTTTCTCAGGGACTCATTACTTCACATTCACAACATCCTAACCAAGGTAGTGCTAGCACTAATCACAATTCTAGCATAAATAGTGCTGCACCCACAAGACAGAGATCAATGAAGCGTGGTGGTGGTGGTGGCAAACAAGGTGGTTTTTCTCGAGGCCCTACACCTCCTTCGCCATTGCAAGCACTTCCAGTTCCTGAAATGGCGCAGAGTGGTTTTAACAAAGTAGGGCCGGGTGCAGGGCCTGACTCATCTTTTAGAGAGACTAGGCCAACCGGAGGGTTTGCATCTCACACAAATACATCAAATGAGAACTACAGTCAAAGAAGTTCAAACCGGCGAGGAAATTATGGGCAACATGGCCGTGGAGATGCGAGGAACCACTACCAAGGAGGTAGGCGTGATCAGGATCACGGGAATCATGATTGGGGCTCATCTCCTAGTTCACATGCAAGGGGTTCATATGGACATCATCATAGGCCTCATGGCCGGGGTTTTATGGGCCCTTCAGTACAAGGGGCTTCACCATTCGCTCCTCCTCCTCCTGTGAGACCTTATGGGAATGCCTTTGTATATGATCCTGCTGTGGTCTATCTTGTTCCACCGGAGTACTTCAGGGGAATGCCTTATGTCACTGGTCCACCACCTCCATCTTATCTCGTTCAATCAGACCCCATGCGTCTTTCTATTATCCATCAGATCGAGTACTATTTCAGTGATGCTAATTTGGTGAAAGATGAGTACTTGAGGTCCAAGATGGATGAACAGGGATGGGTTCCTATAACCTTAATTGCTAACTTCCCTCGAGTTCAAAGTCTAACCGACAACATAAATTTTCTACTGGAGTGCTTAAAAGGATCTAGCATTGTTGAAGTACAGGGAGACAAAGTAAGGAGGTGTAATGATTGGATGAAATGGATAACACATCAACAGTCTCCTTCAGAATCTGGGTCACAATCCCCTGTAGGTTCTTCTTTTGATAATCTGACTACAAACATGCAGAGAATTTCATTGGAGAACCTAGACAAGGAAAAGGGATTGGGTAACAATTTGGCGGTTACAAACATGGAAGGGTCTATTCAACGTGTATGTTGA

Protein sequence

MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPSTEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGPTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRRGNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVTNMEGSIQRVC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17449.1Spo17449.1mRNA


Homology
[Close]
BLAST of Spo17449.1 vs. NCBI nr
Match: gi|902144654|gb|KNA04923.1| (hypothetical protein SOVF_195170 [Spinacia oleracea])

HSP 1 Score: 971.1 bits (2509), Expect = 7.300e-280
Identity = 489/490 (99.80%), Postives = 489/490 (99.80%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60
           MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS
Sbjct: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60

Query: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120
           TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS
Sbjct: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120

Query: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP 180
           TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP
Sbjct: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP 180

Query: 181 TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR 240
           TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR
Sbjct: 181 TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR 240

Query: 241 GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA 300
           GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA
Sbjct: 241 GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA 300

Query: 301 SPFAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI 360
           SPFA PPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI
Sbjct: 301 SPFA-PPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI 360

Query: 361 EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG 420
           EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG
Sbjct: 361 EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG 420

Query: 421 DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT 480
           DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT
Sbjct: 421 DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT 480

Query: 481 NMEGSIQRVC 491
           NMEGSIQRVC
Sbjct: 481 NMEGSIQRVC 489
[Close]
BLAST of Spo17449.1 vs. NCBI nr
Match: gi|731374262|ref|XP_010666913.1| (PREDICTED: la-related protein 1C-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 587.8 bits (1514), Expect = 1.700e-164
Identity = 331/502 (65.94%), Postives = 384/502 (76.49%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60
           MA T P T    +S+++++SPR       VLPS WAQ+V +G G+ PE  +    + +P+
Sbjct: 1   MAATTPATETTAESSINSHSPR-------VLPSAWAQIV-KGPGDSPENHDILSSENIPA 60

Query: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120
           TE NV KK AWN  IS    P PP GD  VV+GA AWPALSESTR  F    SSSDSPKS
Sbjct: 61  TESNVGKKPAWNNAISSSSTPPPPSGDQPVVIGATAWPALSESTR--FPLKLSSSDSPKS 120

Query: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGG-KQGGFSRG 180
           TPEVS P SQG I SHSQ P QG+A  N  SS+NS APTRQRSMKRGGGGG +QGGF+RG
Sbjct: 121 TPEVSVPESQGPINSHSQQPKQGNA--NQISSMNSTAPTRQRSMKRGGGGGNRQGGFTRG 180

Query: 181 PTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNR 240
           P PP PL A PVPEM QS F+KV P A PDSSFRETRP G FASH   SNE+ +QRSSNR
Sbjct: 181 PPPPPPLPAFPVPEMPQSSFSKVVPAARPDSSFRETRPPGVFASHPMPSNEHPNQRSSNR 240

Query: 241 RGNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQG 300
           RGN+GQHGRGD R++Y GGRRDQDHGNHD  SS + + RG++G+ HRPHGRGFMGP VQG
Sbjct: 241 RGNFGQHGRGDGRSNYHGGRRDQDHGNHDRSSSSNFNGRGAHGYPHRPHGRGFMGPPVQG 300

Query: 301 ASPFAPPPPVRPYGNAFVY-DPAVVYLVP---PEYFRGMPYVTGPPPPSYLVQSDPMRLS 360
           A PF PP  VRPYGNAF+Y DP+VVYL+P   PE F GMPY+TGPPPP YLV   P R S
Sbjct: 301 APPFTPPL-VRPYGNAFLYPDPSVVYLIPSFPPESFGGMPYITGPPPPPYLVA--PSRAS 360

Query: 361 IIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSI 420
           II+QIEYYFS+ANLVKD +LRSKMDEQGWVPITLIA+FPRV+ LTD+I F+L+C+K S+I
Sbjct: 361 IINQIEYYFSEANLVKDAFLRSKMDEQGWVPITLIADFPRVRQLTDSIPFILDCIKESNI 420

Query: 421 VEVQGDKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLE-------NLD 480
           VEVQGDKVR+C+DWMKWI  Q S +ESG+QSPVG SFD LTT +QR+SLE       +L 
Sbjct: 421 VEVQGDKVRKCDDWMKWIAPQPSSAESGAQSPVG-SFDGLTTAVQRVSLEENQDNTSSLL 480

Query: 481 KEKGLGNNLAVTNMEGSIQRVC 491
           K+K L NNL++TNMEGSIQRVC
Sbjct: 481 KDKELANNLSITNMEGSIQRVC 486
[Close]
BLAST of Spo17449.1 vs. NCBI nr
Match: gi|590594521|ref|XP_007017875.1| (Winged-helix DNA-binding transcription factor family protein, putative [Theobroma cacao])

HSP 1 Score: 271.2 bits (692), Expect = 3.600e-69
Identity = 218/528 (41.29%), Postives = 282/528 (53.41%), Query Frame = 1 

		  

Query: 9   VAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGE----------LPEKTESSPPDIL 68
           + A+ S+ S+    SP  +R  LPSPWAQ VVRG  E           P    S P   L
Sbjct: 3   MTADSSSPSDGGLNSPQFRRKNLPSPWAQ-VVRGESESIVAVHHTPSSPSSATSPPVASL 62

Query: 69  PS----TEGNVAKKAAWNKPISPPP--LPSPPGGD--------------------HGV-- 128
           P     ++ + +K A+ +   SPPP  L +  G D                    +GV  
Sbjct: 63  PEQATFSDCSPSKAASSSSSSSPPPDNLAADGGSDSNSNSNAAARSKKPAWNKPSNGVVE 122

Query: 129 ---VMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEVSGPVSQGLITSHSQHPNQGSAST 188
              VMGAA+WPALSE+ R    P   +  S K+ P+ S   SQG +   S    QG+++ 
Sbjct: 123 VSPVMGAASWPALSEAARA--SPKSLADSSSKTVPDGSLSTSQGPVIPQSTQ-KQGTSNA 182

Query: 189 NHNSSINSAAPTRQRSMKRGGGGG--------KQGGFS-RGPTPPSPLQALPVPEMAQSG 248
           N  S+ N    +RQRS KRGG GG           GFS + P PP P    PV +M  + 
Sbjct: 183 NPTSTPNRTMSSRQRSSKRGGSGGGNNSASGPPHSGFSHQHPPPPPPPPPFPVLQMPPNS 242

Query: 249 FNKVGPGAGPDSSFR---------ETRPTGGFASHTNTSNENYSQRSSNRRGNYGQHGRG 308
           +    P A PD S R         E RP GGFAS ++    N  + SS R GNYG  G G
Sbjct: 243 YGNFVP-AMPDPSMRDPQYRGNNWENRPVGGFASQSH----NDHRHSSRRGGNYGPRGDG 302

Query: 309 DARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGASPFAPPPPV 368
              N+Y GGRRDQD GN+  G       R  +  H R   RGF  P    A  F PP PV
Sbjct: 303 GYHNNY-GGRRDQDRGNYGSG-------RDGHMQHQRAPPRGFPRPPPPSAHSFVPPQPV 362

Query: 369 RPYGNAFVYDPAVVYL--VPPEYFRGMPYVTGPPPPSYL--VQSDPMRLSIIHQIEYYFS 428
           RP+ N   Y P  +Y   +P E FRGMP  T  PPP+ +  V   P+   ++HQI+YYFS
Sbjct: 363 RPFVNPIGY-PEFIYFPTMPMEPFRGMPLFTHAPPPAMIMPVPELPLPALLLHQIDYYFS 422

Query: 429 DANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRR 472
           DANLVKDE+L+S MD+QGWVPI+LIA FPRV+SLT NI  +L+ L+ S+IVEVQ DKVRR
Sbjct: 423 DANLVKDEFLKSNMDDQGWVPISLIAGFPRVKSLTSNIQLILDSLRSSTIVEVQDDKVRR 482
[Close]
BLAST of Spo17449.1 vs. NCBI nr
Match: gi|720032150|ref|XP_010266025.1| (PREDICTED: la-related protein 1C-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 270.0 bits (689), Expect = 8.100e-69
Identity = 211/531 (39.74%), Postives = 284/531 (53.48%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRS----------PVKQRGVLPSPWAQVV----------- 60
           MATTA       D+T +N SPRS          P  +R  L SPWA VV           
Sbjct: 1   MATTA-------DATSNNLSPRSSGFSGDIFNTPQLRRRNLSSPWAHVVRGDSEAVTASP 60

Query: 61  -------VRGVGELPE------KTESSPPDILPSTEGNVA--------KKAAWNKPISPP 120
                  +    ++P+      K  SS   +  S   N A        K+ AWNK     
Sbjct: 61  SSPSSPMIATQEQIPDSDCTTVKVSSSENSVADSPSENDAGMSNVARAKRQAWNKL---- 120

Query: 121 PLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEVSGPVSQG-LITSHS 180
              S    + G VMGA +WPALSEST+ L K   SS+DS K   + S  + QG ++TS  
Sbjct: 121 ---SNGAVELGPVMGAVSWPALSESTKALPK---SSTDSLKGLSDGSVSIPQGPIVTSSQ 180

Query: 181 QHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGG--KQGGFSRGPTPPSPLQALPVPEMA 240
           Q  +  +A+TN  S+ N    TRQ+SMKRGGGGG    G FS+ P PP P  A+ +P+  
Sbjct: 181 QKESTNNATTN--STPNHVFSTRQKSMKRGGGGGGSANGNFSQ-PPPPPPAPAMEMPQNN 240

Query: 241 QSGF--NKVGPGAGPDSSFR----ETRPTGGFASHTNTSNENYSQRSSNRRGNYGQHGRG 300
           +SG     V   A  D S +    ET   GGF S ++  N++  QR+S RRGN G H R 
Sbjct: 241 KSGKPPQVVLESAPRDPSHKSNNWETGQRGGFVSQSHIGNDHPQQRNSFRRGNGGSHPRS 300

Query: 301 DARNHYQ-GGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGASPFAPPPP 360
           D  +H   G RRDQD GNH+W S    + R  +    R   RGF+ P    ++PF  PPP
Sbjct: 301 DGTHHNNYGSRRDQDRGNHEWNSHRGFNGRDVHMQQQRMVPRGFIRPPPPNSTPFIGPPP 360

Query: 361 VRPYGNAFVYDPAV--VYLVP---PEYFRGMPYVTGPPPPSYLVQSDPMRLS-IIHQIEY 420
           VRP+GN   +      VY VP   PE FRG+P++   PPP +    DP   + ++ QI+Y
Sbjct: 361 VRPFGNPMGFPDVTSPVYYVPAPPPEPFRGVPFIHHTPPPMFFPTLDPQLCAMLVRQIDY 420

Query: 421 YFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQGDK 472
           YFS  NL KD +LR  MDEQGWVP++LI++F RV+ LT+NI F+LE ++ S++VEVQGDK
Sbjct: 421 YFSPENLCKDIFLRQNMDEQGWVPVSLISSFNRVKQLTNNIPFILEAVRSSTVVEVQGDK 480
[Close]
BLAST of Spo17449.1 vs. NCBI nr
Match: gi|302142718|emb|CBI19921.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 268.1 bits (684), Expect = 3.100e-68
Identity = 206/482 (42.74%), Postives = 274/482 (56.85%), Query Frame = 1 

		  

Query: 3   TTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPSTE 62
           +++P T   E  + S  SP  P+      PSP         G      E+S  D   S  
Sbjct: 46  SSSPVTSCPEQISFSECSPTKPLS-----PSPSRSPAPDNSGVGEALLENS--DGCGSNA 105

Query: 63  GNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTP 122
           G   KK AWNKP       S    + G VMGA +WPALSESTR   +   SSSDSPK   
Sbjct: 106 GR-QKKPAWNKP-------SNDVVEVGPVMGAVSWPALSESTRASPR---SSSDSPKPAV 165

Query: 123 EVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGPTP 182
           + S    QG +  HS    Q  A+TN NSS N A+P RQRS+K GGG  +         P
Sbjct: 166 DGSAASIQGPVIPHSPQ-KQVPANTNPNSSQNHASPFRQRSIKSGGGSSQTVHGHLPSQP 225

Query: 183 PSPLQALPVPEMAQSGFNKVGPGAGPDSSFR---------ETRPTGGFASHTNTSNENYS 242
           P P    P+ EM Q+ + K+ P    DSS R         ETRP GGF       +++  
Sbjct: 226 PPPPPPYPLFEMPQNKYAKMAPQV-LDSSTREPPYRNNTWETRPIGGFVPQPRGLSDHPL 285

Query: 243 QRSSNRRGNYGQHGRGDARNHYQ-GGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGF 302
            R+S RRGN+G H RGD  +H   GGRRDQD GN++W +S SS+ R  +    R   RGF
Sbjct: 286 PRNS-RRGNFGPHPRGDGPHHNNYGGRRDQDRGNYEW-NSRSSNVRDIHMQPQRAPPRGF 345

Query: 303 MGPSVQGASP-FAPPPPVRPYGNAFVYD--PAVVY---LVPPEYFRGMPYVT-GPPPPSY 362
           +  + Q +SP F  P P+RP+ N   Y   P+ +Y    +P E FR +P+V   PPPP +
Sbjct: 346 IRAAPQSSSPRFMTPQPIRPFMNPAGYPDMPSQMYYFPALPSEPFRSVPFVAHAPPPPMF 405

Query: 363 L-VQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNIN 422
           + V   P+   +++QIEYYFSD NL+KD+YLRS MD+QGWVPITLIA FPRVQSLT++I 
Sbjct: 406 IPVPDPPLPTLLVNQIEYYFSDVNLIKDDYLRSYMDDQGWVPITLIAGFPRVQSLTNSIP 465

Query: 423 FLLECLKGSSIVEVQGDKVRRCNDWMKWI-THQQSPSESGSQSPVGSSFDNLTTNMQRIS 466
            +L+ L+ S+ VEVQGDKVRR N+WMKW+ +  +  ++ G QSP G S+  L ++ Q+++
Sbjct: 466 LILDSLRTSTSVEVQGDKVRRRNEWMKWLPSSARFHADLGLQSPGGLSYGTLVSSFQKVT 505
[Close]
BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QE07_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195170 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 5.100e-280
Identity = 489/490 (99.80%), Postives = 489/490 (99.80%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60
           MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS
Sbjct: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60

Query: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120
           TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS
Sbjct: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120

Query: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP 180
           TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP
Sbjct: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGP 180

Query: 181 TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR 240
           TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR
Sbjct: 181 TPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNRR 240

Query: 241 GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA 300
           GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA
Sbjct: 241 GNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGA 300

Query: 301 SPFAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI 360
           SPFA PPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI
Sbjct: 301 SPFA-PPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQI 360

Query: 361 EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG 420
           EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG
Sbjct: 361 EYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQG 420

Query: 421 DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT 480
           DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT
Sbjct: 421 DKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLENLDKEKGLGNNLAVT 480

Query: 481 NMEGSIQRVC 491
           NMEGSIQRVC
Sbjct: 481 NMEGSIQRVC 489
[Close]
BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DXY6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_005370 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 1.200e-164
Identity = 331/502 (65.94%), Postives = 384/502 (76.49%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60
           MA T P T    +S+++++SPR       VLPS WAQ+V +G G+ PE  +    + +P+
Sbjct: 1   MAATTPATETTAESSINSHSPR-------VLPSAWAQIV-KGPGDSPENHDILSSENIPA 60

Query: 61  TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKS 120
           TE NV KK AWN  IS    P PP GD  VV+GA AWPALSESTR  F    SSSDSPKS
Sbjct: 61  TESNVGKKPAWNNAISSSSTPPPPSGDQPVVIGATAWPALSESTR--FPLKLSSSDSPKS 120

Query: 121 TPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGG-KQGGFSRG 180
           TPEVS P SQG I SHSQ P QG+A  N  SS+NS APTRQRSMKRGGGGG +QGGF+RG
Sbjct: 121 TPEVSVPESQGPINSHSQQPKQGNA--NQISSMNSTAPTRQRSMKRGGGGGNRQGGFTRG 180

Query: 181 PTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQRSSNR 240
           P PP PL A PVPEM QS F+KV P A PDSSFRETRP G FASH   SNE+ +QRSSNR
Sbjct: 181 PPPPPPLPAFPVPEMPQSSFSKVVPAARPDSSFRETRPPGVFASHPMPSNEHPNQRSSNR 240

Query: 241 RGNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQG 300
           RGN+GQHGRGD R++Y GGRRDQDHGNHD  SS + + RG++G+ HRPHGRGFMGP VQG
Sbjct: 241 RGNFGQHGRGDGRSNYHGGRRDQDHGNHDRSSSSNFNGRGAHGYPHRPHGRGFMGPPVQG 300

Query: 301 ASPFAPPPPVRPYGNAFVY-DPAVVYLVP---PEYFRGMPYVTGPPPPSYLVQSDPMRLS 360
           A PF PP  VRPYGNAF+Y DP+VVYL+P   PE F GMPY+TGPPPP YLV   P R S
Sbjct: 301 APPFTPPL-VRPYGNAFLYPDPSVVYLIPSFPPESFGGMPYITGPPPPPYLVA--PSRAS 360

Query: 361 IIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSI 420
           II+QIEYYFS+ANLVKD +LRSKMDEQGWVPITLIA+FPRV+ LTD+I F+L+C+K S+I
Sbjct: 361 IINQIEYYFSEANLVKDAFLRSKMDEQGWVPITLIADFPRVRQLTDSIPFILDCIKESNI 420

Query: 421 VEVQGDKVRRCNDWMKWITHQQSPSESGSQSPVGSSFDNLTTNMQRISLE-------NLD 480
           VEVQGDKVR+C+DWMKWI  Q S +ESG+QSPVG SFD LTT +QR+SLE       +L 
Sbjct: 421 VEVQGDKVRKCDDWMKWIAPQPSSAESGAQSPVG-SFDGLTTAVQRVSLEENQDNTSSLL 480

Query: 481 KEKGLGNNLAVTNMEGSIQRVC 491
           K+K L NNL++TNMEGSIQRVC
Sbjct: 481 KDKELANNLSITNMEGSIQRVC 486
[Close]
BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Match: A0A061FCP1_THECC (Winged-helix DNA-binding transcription factor family protein, putative OS=Theobroma cacao GN=TCM_034273 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.500e-69
Identity = 218/528 (41.29%), Postives = 282/528 (53.41%), Query Frame = 1 

		  

Query: 9   VAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGE----------LPEKTESSPPDIL 68
           + A+ S+ S+    SP  +R  LPSPWAQ VVRG  E           P    S P   L
Sbjct: 3   MTADSSSPSDGGLNSPQFRRKNLPSPWAQ-VVRGESESIVAVHHTPSSPSSATSPPVASL 62

Query: 69  PS----TEGNVAKKAAWNKPISPPP--LPSPPGGD--------------------HGV-- 128
           P     ++ + +K A+ +   SPPP  L +  G D                    +GV  
Sbjct: 63  PEQATFSDCSPSKAASSSSSSSPPPDNLAADGGSDSNSNSNAAARSKKPAWNKPSNGVVE 122

Query: 129 ---VMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEVSGPVSQGLITSHSQHPNQGSAST 188
              VMGAA+WPALSE+ R    P   +  S K+ P+ S   SQG +   S    QG+++ 
Sbjct: 123 VSPVMGAASWPALSEAARA--SPKSLADSSSKTVPDGSLSTSQGPVIPQSTQ-KQGTSNA 182

Query: 189 NHNSSINSAAPTRQRSMKRGGGGG--------KQGGFS-RGPTPPSPLQALPVPEMAQSG 248
           N  S+ N    +RQRS KRGG GG           GFS + P PP P    PV +M  + 
Sbjct: 183 NPTSTPNRTMSSRQRSSKRGGSGGGNNSASGPPHSGFSHQHPPPPPPPPPFPVLQMPPNS 242

Query: 249 FNKVGPGAGPDSSFR---------ETRPTGGFASHTNTSNENYSQRSSNRRGNYGQHGRG 308
           +    P A PD S R         E RP GGFAS ++    N  + SS R GNYG  G G
Sbjct: 243 YGNFVP-AMPDPSMRDPQYRGNNWENRPVGGFASQSH----NDHRHSSRRGGNYGPRGDG 302

Query: 309 DARNHYQGGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGFMGPSVQGASPFAPPPPV 368
              N+Y GGRRDQD GN+  G       R  +  H R   RGF  P    A  F PP PV
Sbjct: 303 GYHNNY-GGRRDQDRGNYGSG-------RDGHMQHQRAPPRGFPRPPPPSAHSFVPPQPV 362

Query: 369 RPYGNAFVYDPAVVYL--VPPEYFRGMPYVTGPPPPSYL--VQSDPMRLSIIHQIEYYFS 428
           RP+ N   Y P  +Y   +P E FRGMP  T  PPP+ +  V   P+   ++HQI+YYFS
Sbjct: 363 RPFVNPIGY-PEFIYFPTMPMEPFRGMPLFTHAPPPAMIMPVPELPLPALLLHQIDYYFS 422

Query: 429 DANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRR 472
           DANLVKDE+L+S MD+QGWVPI+LIA FPRV+SLT NI  +L+ L+ S+IVEVQ DKVRR
Sbjct: 423 DANLVKDEFLKSNMDDQGWVPISLIAGFPRVKSLTSNIQLILDSLRSSTIVEVQDDKVRR 482
[Close]
BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Match: F6GZT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14900 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.100e-68
Identity = 206/482 (42.74%), Postives = 274/482 (56.85%), Query Frame = 1 

		  

Query: 3   TTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPSTE 62
           +++P T   E  + S  SP  P+      PSP         G      E+S  D   S  
Sbjct: 52  SSSPVTSCPEQISFSECSPTKPLS-----PSPSRSPAPDNSGVGEALLENS--DGCGSNA 111

Query: 63  GNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTP 122
           G   KK AWNKP       S    + G VMGA +WPALSESTR   +   SSSDSPK   
Sbjct: 112 GR-QKKPAWNKP-------SNDVVEVGPVMGAVSWPALSESTRASPR---SSSDSPKPAV 171

Query: 123 EVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGGKQGGFSRGPTP 182
           + S    QG +  HS    Q  A+TN NSS N A+P RQRS+K GGG  +         P
Sbjct: 172 DGSAASIQGPVIPHSPQ-KQVPANTNPNSSQNHASPFRQRSIKSGGGSSQTVHGHLPSQP 231

Query: 183 PSPLQALPVPEMAQSGFNKVGPGAGPDSSFR---------ETRPTGGFASHTNTSNENYS 242
           P P    P+ EM Q+ + K+ P    DSS R         ETRP GGF       +++  
Sbjct: 232 PPPPPPYPLFEMPQNKYAKMAPQV-LDSSTREPPYRNNTWETRPIGGFVPQPRGLSDHPL 291

Query: 243 QRSSNRRGNYGQHGRGDARNHYQ-GGRRDQDHGNHDWGSSPSSHARGSYGHHHRPHGRGF 302
            R+S RRGN+G H RGD  +H   GGRRDQD GN++W +S SS+ R  +    R   RGF
Sbjct: 292 PRNS-RRGNFGPHPRGDGPHHNNYGGRRDQDRGNYEW-NSRSSNVRDIHMQPQRAPPRGF 351

Query: 303 MGPSVQGASP-FAPPPPVRPYGNAFVYD--PAVVY---LVPPEYFRGMPYVT-GPPPPSY 362
           +  + Q +SP F  P P+RP+ N   Y   P+ +Y    +P E FR +P+V   PPPP +
Sbjct: 352 IRAAPQSSSPRFMTPQPIRPFMNPAGYPDMPSQMYYFPALPSEPFRSVPFVAHAPPPPMF 411

Query: 363 L-VQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNIN 422
           + V   P+   +++QIEYYFSD NL+KD+YLRS MD+QGWVPITLIA FPRVQSLT++I 
Sbjct: 412 IPVPDPPLPTLLVNQIEYYFSDVNLIKDDYLRSYMDDQGWVPITLIAGFPRVQSLTNSIP 471

Query: 423 FLLECLKGSSIVEVQGDKVRRCNDWMKWI-THQQSPSESGSQSPVGSSFDNLTTNMQRIS 466
            +L+ L+ S+ VEVQGDKVRR N+WMKW+ +  +  ++ G QSP G S+  L ++ Q+++
Sbjct: 472 LILDSLRTSTSVEVQGDKVRRRNEWMKWLPSSARFHADLGLQSPGGLSYGTLVSSFQKVT 511
[Close]
BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Match: M5Y7L2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018923mg PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.600e-66
Identity = 203/492 (41.26%), Postives = 269/492 (54.67%), Query Frame = 1 

		  

Query: 1   MATTAPTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPS 60
           + T+AP      D ++S+ + RS        P P           LP    SS  +    
Sbjct: 50  LGTSAPEQTPFSDCSVSSKAARSS-------PPPLP---------LPTADSSSAAEGSNG 109

Query: 61  TEGNVA--KKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFK-PTPSSSDS 120
             GN A  KK AWNKP +     SP       VMGA +WPALSESTR   K P  SSS +
Sbjct: 110 NNGNAARPKKPAWNKPANDDVEVSPT-----TVMGAVSWPALSESTRASPKLPADSSSKT 169

Query: 121 PKSTPEVSGPVS--QGLITSHSQHPNQGSASTNH---NSSINSAAPTRQRSMKRGGGGGK 180
                   G VS  Q  + +HS  PN    STN+   NS+ N+A P RQR  KRGGG   
Sbjct: 170 VSDATVTHGSVSVSQAPVITHS--PNSKRHSTNNASPNSTSNNAFPARQRPSKRGGGSST 229

Query: 181 QGG-----FSRGPTPPSPLQALPVPEMAQSGFNKVGPG----AGPDSSFR----ETRPTG 240
            GG     F   PTPP P    PV  +  +G+  + P     +  D SFR    + RP G
Sbjct: 230 GGGHAHSGFGHPPTPPPP-PPFPVFPILPNGYGNLVPTMPDPSSRDPSFRGNSWDVRPVG 289

Query: 241 GFASHTNTSNENYSQRSSNRRGNYGQHGRGDARNHYQ-GGRRDQDHGNHDWGSSPSSHAR 300
           GF + ++  N++   R+++RRGN+G H RGD   H   GG+RDQD GN+        +AR
Sbjct: 290 GFVTQSHQVNDH---RNNSRRGNFGPHPRGDGPYHNNHGGKRDQDRGNY-------MNAR 349

Query: 301 GSYGHHHRPHGRGFMGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYL--VPPEYFRGMPY 360
            ++ H HR   RG + P+    + FAP P  RP+ N   +    VY+  +P E  RGMP+
Sbjct: 350 DAHMHQHRAPPRGLVRPAPPNTAAFAPQP-ARPFANPMGFPGEFVYIPTLPLEPMRGMPF 409

Query: 361 VTGPPPPSYL--VQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFP 420
           ++  P P+    V   P+   I++QI+YYFSDANL+KD++LRS MD QGWVPI+LIANFP
Sbjct: 410 ISQAPHPTMFIPVAESPLPSLIVNQIDYYFSDANLIKDDFLRSNMDVQGWVPISLIANFP 469

Query: 421 RVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWI-THQQSPSESGSQSPVGSSFD 466
           RV+SLT NI  +L+ L+ SSIVEV  DKVRR N+WMKWI    Q P ESGS SP   S +
Sbjct: 470 RVKSLTTNIQLILDSLRASSIVEVHDDKVRRLNEWMKWIPAGSQLPFESGSSSPGVLSHN 506
[Close]
BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Match: LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana GN=LARP1C PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.900e-34
Identity = 150/458 (32.75%), Postives = 209/458 (45.63%), Query Frame = 1 

		  

Query: 5   APTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPSTEGN 64
           A     A  S+  + +P  P+    V  +P A V+        EK+E+S        + N
Sbjct: 57  AAAAAVAGPSSPQSRAPIEPIASVSVA-APTAAVLTVEAAAGDEKSEAS------GGQDN 116

Query: 65  VAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEV 124
             KK  W +P       S    + G VMGA++WPALSE+T+       SSSDS KS  +V
Sbjct: 117 AGKKPVWKRP-------SNGASEVGPVMGASSWPALSETTKA--PSNKSSSDSLKSLGDV 176

Query: 125 --------SGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMK-RGGGGGKQGG 184
                   S PV+QG+  +    P Q +   N N + N    +RQRS K R G  G   G
Sbjct: 177 PSSSSASSSVPVTQGIANASVPAPKQ-AGRANPNPTPNH---SRQRSFKQRNGASGSANG 236

Query: 185 FSRGPTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQR 244
               P+       LP    +  G N+                  GFAS  +   EN SQR
Sbjct: 237 TVSQPSAQGSFTELPSHNPSPRGQNQ----------------KNGFASQNHGGTENPSQR 296

Query: 245 SSNRRGNYGQHGRGDARNHYQ--GGRRDQDHGNHDWGSSPSSHARGSYGHHHR--PHGRG 304
            S R  N          NH+Q  GGRR+Q+HGN +W    S + R       R  P    
Sbjct: 297 DSYRNQN---------GNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPAFVR 356

Query: 305 FMGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTG-PPPPS--YLVQ 364
              P+VQ    F    P         + P    L    Y+  MPY+T  P  P   Y  Q
Sbjct: 357 HPSPTVQPIPQFMAAQPFPS------HIPFPTELAQSSYYPRMPYMTPIPHGPQFFYHYQ 416

Query: 365 SDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLE 424
             P+ + +  QI+YYFSD NL+ D YLR  M+ +G+VP+ ++A F +V  LTDNI  ++E
Sbjct: 417 DPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVE 462

Query: 425 CLKGSSIVEVQGDKVRRCNDWMKWITHQQSPSESGSQS 447
            L+ S  VEVQGD +R+ ++W  W+  +++P+ SG QS
Sbjct: 477 ALQNSPHVEVQGDFIRKRDNWQNWVL-RRNPTGSGPQS 462
[Close]
BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Match: LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana GN=LARP1A PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.300e-21
Identity = 75/228 (32.89%), Postives = 107/228 (46.93%), Query Frame = 1 

		  

Query: 287 PHGRGF--------MGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYLV--PPEYFRG--- 346
           PH RGF         GP   G  PF  P P    G    +   V YL   PP   RG   
Sbjct: 197 PHQRGFDPRNMPQGAGPRNFGRPPFMGPAPGFLVGPGPGFPGPVYYLPGPPPGAIRGPYP 256

Query: 347 ---MPYVTGPPPPSYLVQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLI 406
               PY     PP    +   +R  ++ Q+EYYFSD NL  D YL S MDE+GWVP  +I
Sbjct: 257 PRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKII 316

Query: 407 ANFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWI------THQQSPSESGS 466
           A F RV+++T +++F++  L  S+ VEVQGD++R+ + W  WI      T  ++  +   
Sbjct: 317 AGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376

Query: 467 QSP----VGSSFDNLTTNMQRISLENLDKE---KGLGNNLAVTNMEGS 486
            SP     G +F N +    + ++ +   E       NN    N++ S
Sbjct: 377 DSPKSITSGDNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKSGNLKSS 424
[Close]
BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Match: LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 1.200e-16
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1 

		  

Query: 336 YVTGPPPPSYLVQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPR 395
           Y  G     Y V+   ++  I  QIEYYFS  NL +D +LR KMDEQG++PI+LIA F R
Sbjct: 199 YDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQR 258

Query: 396 VQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKW 433
           VQ+LT N+N +LE LK S+ VE+  +K+R+  +  KW
Sbjct: 259 VQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
[Close]
BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Match: LARP1_HUMAN (La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 1.400e-15
Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 1 

		  

Query: 345 YLVQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNIN 404
           Y V  + ++  I  QIEYYFS  NL +D +LR KMD  G++PITLIA+F RVQ+LT +I+
Sbjct: 396 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDIS 455

Query: 405 FLLECLKGSSIVEVQGDKVRRCNDWMKW 433
            +   LK S +VE+  +KVRR  +  KW
Sbjct: 456 LIFAALKDSKVVEIVDEKVRRREEPEKW 483
[Close]
BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Match: LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana GN=LARP1B PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 3.900e-15
Identity = 117/439 (26.65%), Postives = 193/439 (43.96%), Query Frame = 1 

		  

Query: 53  SPPDILPS-TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPT 112
           S P +LPS +  +     + + P S P + SPP G++            S+      KP 
Sbjct: 29  SSPWLLPSDSHDHPTLSLSQDDPFSAPSV-SPPTGNNS-----------SDYDNADKKPP 88

Query: 113 PSSSDSPKSTPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGG 172
           P  +    ++    GPV  G   S         +S+  + S++++ P    S        
Sbjct: 89  PVWNMPSSNSSSDVGPV-MGAAESWPALSLSARSSSIKSPSLDASKPFPDGSSSSIPPPQ 148

Query: 173 KQGGFSRGPTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNEN 232
                S      S + A      A +   +       ++S   T      A+  NT ++N
Sbjct: 149 ATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSSSSTSSNVSNAAPLNTRDQN 208

Query: 233 YSQR-----------SSNRRGNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGS 292
           +SQR           +S R  N   + RG+  +H  G RR+ +HGN    S  +   R  
Sbjct: 209 HSQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHH--GNRRNYEHGNQSGFSHRNYSGRDM 268

Query: 293 YGHHHRPHG----RGFMGPSVQGASP--FAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGM 352
           +    R  G    +  MGP    AS   +   P +  YG   +Y     ++  P      
Sbjct: 269 HLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDP 328

Query: 353 PYVTGPPP--PSYLVQSDPMRLS-IIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIA 412
             + GP P  P Y    D +  + I+ Q+EYYFS  NL +DE+LR +M+++GWVP+ +IA
Sbjct: 329 MGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIA 388

Query: 413 NFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWITHQQSPSESGSQSPVGSS 471
            F R+  LT+NI  +LE L+ S +VE+QG+ +RR  DW K++  ++ PS SG  +   S+
Sbjct: 389 AFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPRE-PSRSGPAAG-ASN 448
[Close]
BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Match: AT4G35890.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.600e-35
Identity = 150/458 (32.75%), Postives = 209/458 (45.63%), Query Frame = 1 

		  

Query: 5   APTTVAAEDSTMSNNSPRSPVKQRGVLPSPWAQVVVRGVGELPEKTESSPPDILPSTEGN 64
           A     A  S+  + +P  P+    V  +P A V+        EK+E+S        + N
Sbjct: 57  AAAAAVAGPSSPQSRAPIEPIASVSVA-APTAAVLTVEAAAGDEKSEAS------GGQDN 116

Query: 65  VAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPTPSSSDSPKSTPEV 124
             KK  W +P       S    + G VMGA++WPALSE+T+       SSSDS KS  +V
Sbjct: 117 AGKKPVWKRP-------SNGASEVGPVMGASSWPALSETTKA--PSNKSSSDSLKSLGDV 176

Query: 125 --------SGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMK-RGGGGGKQGG 184
                   S PV+QG+  +    P Q +   N N + N    +RQRS K R G  G   G
Sbjct: 177 PSSSSASSSVPVTQGIANASVPAPKQ-AGRANPNPTPNH---SRQRSFKQRNGASGSANG 236

Query: 185 FSRGPTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNENYSQR 244
               P+       LP    +  G N+                  GFAS  +   EN SQR
Sbjct: 237 TVSQPSAQGSFTELPSHNPSPRGQNQ----------------KNGFASQNHGGTENPSQR 296

Query: 245 SSNRRGNYGQHGRGDARNHYQ--GGRRDQDHGNHDWGSSPSSHARGSYGHHHR--PHGRG 304
            S R  N          NH+Q  GGRR+Q+HGN +W    S + R       R  P    
Sbjct: 297 DSYRNQN---------GNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPAFVR 356

Query: 305 FMGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGMPYVTG-PPPPS--YLVQ 364
              P+VQ    F    P         + P    L    Y+  MPY+T  P  P   Y  Q
Sbjct: 357 HPSPTVQPIPQFMAAQPFPS------HIPFPTELAQSSYYPRMPYMTPIPHGPQFFYHYQ 416

Query: 365 SDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIANFPRVQSLTDNINFLLE 424
             P+ + +  QI+YYFSD NL+ D YLR  M+ +G+VP+ ++A F +V  LTDNI  ++E
Sbjct: 417 DPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVE 462

Query: 425 CLKGSSIVEVQGDKVRRCNDWMKWITHQQSPSESGSQS 447
            L+ S  VEVQGD +R+ ++W  W+  +++P+ SG QS
Sbjct: 477 ALQNSPHVEVQGDFIRKRDNWQNWVL-RRNPTGSGPQS 462
[Close]
BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Match: AT5G21160.3 (LA RNA-binding protein)

HSP 1 Score: 103.6 bits (257), Expect = 3.500e-22
Identity = 75/228 (32.89%), Postives = 107/228 (46.93%), Query Frame = 1 

		  

Query: 287 PHGRGF--------MGPSVQGASPFAPPPPVRPYGNAFVYDPAVVYLV--PPEYFRG--- 346
           PH RGF         GP   G  PF  P P    G    +   V YL   PP   RG   
Sbjct: 197 PHQRGFDPRNMPQGAGPRNFGRPPFMGPAPGFLVGPGPGFPGPVYYLPGPPPGAIRGPYP 256

Query: 347 ---MPYVTGPPPPSYLVQSDPMRLSIIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLI 406
               PY     PP    +   +R  ++ Q+EYYFSD NL  D YL S MDE+GWVP  +I
Sbjct: 257 PRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKII 316

Query: 407 ANFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWI------THQQSPSESGS 466
           A F RV+++T +++F++  L  S+ VEVQGD++R+ + W  WI      T  ++  +   
Sbjct: 317 AGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376

Query: 467 QSP----VGSSFDNLTTNMQRISLENLDKE---KGLGNNLAVTNMEGS 486
            SP     G +F N +    + ++ +   E       NN    N++ S
Sbjct: 377 DSPKSITSGDNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKSGNLKSS 424
[Close]
BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Match: AT5G66100.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 84.3 bits (207), Expect = 2.200e-16
Identity = 117/439 (26.65%), Postives = 193/439 (43.96%), Query Frame = 1 

		  

Query: 53  SPPDILPS-TEGNVAKKAAWNKPISPPPLPSPPGGDHGVVMGAAAWPALSESTRPLFKPT 112
           S P +LPS +  +     + + P S P + SPP G++            S+      KP 
Sbjct: 30  SSPWLLPSDSHDHPTLSLSQDDPFSAPSV-SPPTGNNS-----------SDYDNADKKPP 89

Query: 113 PSSSDSPKSTPEVSGPVSQGLITSHSQHPNQGSASTNHNSSINSAAPTRQRSMKRGGGGG 172
           P  +    ++    GPV  G   S         +S+  + S++++ P    S        
Sbjct: 90  PVWNMPSSNSSSDVGPV-MGAAESWPALSLSARSSSIKSPSLDASKPFPDGSSSSIPPPQ 149

Query: 173 KQGGFSRGPTPPSPLQALPVPEMAQSGFNKVGPGAGPDSSFRETRPTGGFASHTNTSNEN 232
                S      S + A      A +   +       ++S   T      A+  NT ++N
Sbjct: 150 ATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSSSSTSSNVSNAAPLNTRDQN 209

Query: 233 YSQR-----------SSNRRGNYGQHGRGDARNHYQGGRRDQDHGNHDWGSSPSSHARGS 292
           +SQR           +S R  N   + RG+  +H  G RR+ +HGN    S  +   R  
Sbjct: 210 HSQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHH--GNRRNYEHGNQSGFSHRNYSGRDM 269

Query: 293 YGHHHRPHG----RGFMGPSVQGASP--FAPPPPVRPYGNAFVYDPAVVYLVPPEYFRGM 352
           +    R  G    +  MGP    AS   +   P +  YG   +Y     ++  P      
Sbjct: 270 HLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDP 329

Query: 353 PYVTGPPP--PSYLVQSDPMRLS-IIHQIEYYFSDANLVKDEYLRSKMDEQGWVPITLIA 412
             + GP P  P Y    D +  + I+ Q+EYYFS  NL +DE+LR +M+++GWVP+ +IA
Sbjct: 330 MGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIA 389

Query: 413 NFPRVQSLTDNINFLLECLKGSSIVEVQGDKVRRCNDWMKWITHQQSPSESGSQSPVGSS 471
            F R+  LT+NI  +LE L+ S +VE+QG+ +RR  DW K++  ++ PS SG  +   S+
Sbjct: 390 AFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPRE-PSRSGPAAG-ASN 449
[Close]
BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Match: AT5G46250.1 (RNA-binding protein)

HSP 1 Score: 62.4 bits (150), Expect = 9.000e-10
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1 

		  

Query: 346 LVQSDPMRLSIIHQIEYYFSDANLVKDEYLRS--KMDEQGWVPITLIANFPRVQSLTDNI 405
           +V  D +   II Q+EYYFSD NL  D++L +  K +++G+VPI+ IA F +++ LT + 
Sbjct: 97  VVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDH 156

Query: 406 NFLLECLKGSSIVEVQGD--KVRR 426
             ++  LK SS + V  D  KV+R
Sbjct: 157 ALIVSALKESSFLVVSADEKKVKR 180
[Close]
BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Match: AT3G19090.1 (RNA-binding protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.700e-8
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 1 

		  

Query: 317 VYDPAVVYLVPPEYFRGMPYVTGPPPPSYLVQSDPMRLSIIHQIEYYFSDANLVKDEYLR 376
           V+DPA  + +     +  P        S  + SD +RL I+ Q+EY F+D +L+ +E + 
Sbjct: 110 VHDPAAAFYISNPAVQ-FPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESIS 169

Query: 377 SKM--DEQGWVPITLIANFPRVQSLTDNINFLLECLKGSS--IVEVQGDKVRRCNDW 430
             +  D +G+VP++ IA+  ++++LT N + +   L+ SS  +V   G KV+R + +
Sbjct: 170 KHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQF 225
The following BLAST results are available for this feature:
BLAST of Spo17449.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902144654|gb|KNA04923.1|7.3e-28099.8hypothetical protein SOVF_1951... [more]
gi|731374262|ref|XP_010666913.1|1.7e-16465.9PREDICTED: la-related protein ... [more]
gi|590594521|ref|XP_007017875.1|3.6e-6941.2Winged-helix DNA-binding trans... [more]
gi|720032150|ref|XP_010266025.1|8.1e-6939.7PREDICTED: la-related protein ... [more]
gi|302142718|emb|CBI19921.3|3.1e-6842.7unnamed protein product [Vitis... [more]
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BLAST of Spo17449.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QE07_SPIOL5.1e-28099.8Uncharacterized protein OS=Spi... [more]
A0A0J8DXY6_BETVU1.2e-16465.9Uncharacterized protein OS=Bet... [more]
A0A061FCP1_THECC2.5e-6941.2Winged-helix DNA-binding trans... [more]
F6GZT4_VITVI2.1e-6842.7Putative uncharacterized prote... [more]
M5Y7L2_PRUPE2.6e-6641.2Uncharacterized protein OS=Pru... [more]
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BLAST of Spo17449.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LRP1C_ARATH2.9e-3432.7La-related protein 1C OS=Arabi... [more]
LRP1A_ARATH6.3e-2132.8La-related protein 1A OS=Arabi... [more]
LAR1B_HUMAN1.2e-1648.4La-related protein 1B OS=Homo ... [more]
LARP1_HUMAN1.4e-1548.8La-related protein 1 OS=Homo s... [more]
LRP1B_ARATH3.9e-1526.6La-related protein 1B OS=Arabi... [more]
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BLAST of Spo17449.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G35890.11.6e-3532.7winged-helix DNA-binding trans... [more]
AT5G21160.33.5e-2232.8LA RNA-binding protein[more]
AT5G66100.12.2e-1626.6winged-helix DNA-binding trans... [more]
AT5G46250.19.0e-1040.4RNA-binding protein[more]
AT3G19090.11.7e-829.9RNA-binding protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006630RNA-binding protein Lupus LaPFAMPF05383Lacoord: 356..411
score: 5.9
IPR006630RNA-binding protein Lupus LaSMARTSM00715lacoord: 350..426
score: 2.5
IPR006630RNA-binding protein Lupus LaPROFILEPS50961HTH_LAcoord: 346..435
score: 24
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 347..428
score: 6.3
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 343..434
score: 1.18
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 27..433
score: 2.1
NoneNo IPR availablePANTHERPTHR22792:SF59LA-RELATED PROTEIN 1B-RELATEDcoord: 27..433
score: 2.1

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo219950.71Barchart | Table