Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGTGTTCATTTTAGAAGCCATAACATTTTGTTGCAACTTAAGCTTGTTGAGGCTATTAAGGAGGCTGGAAATGTCAAGGTATATACGTATGATCTGTTCATGTTTTAATTTGATTTTTTTTTTTTTTTTTTTTGACATTGGATGAAATTAAAGAAAGAAAAACAGAAAAAACCCTAAATCTAATCGGGCTCGAGAGGGTGGAGAGTGGGAGTAACACCATTATCCACTGCAGATTTTACACGCAAATGCGCCTAATGAATCAAAATTTGCTCATAATTCGTAATATATCAAAAATATAGTAGTATTAGTTATTGATTTATTGAGGAAATGGTTGACACTTGACAGTGGTACAATCCATGACCATCATGGTTATGAATAAAACAAAAAACCTAGTATATTATGCGATAATGTTCTTTATTTAAGTCCTTGTTTGAGAATCGATTATTGTCTTTTTATTTTTTTTGTTTCTTTTTCAACTATTTTTATTTTTGACCTTTTGAGAATCAATTATTGTTTGTTTTTTGTTTTGTTTCTTTTTTCAACTTTTTTTTTTTTCTTAAATGGAGTATTTTTTTCCAATCAACATACATTAATNTCCATTTTAAGCGTTTCATATTGTTGTATCCATTTAGAATCTATTCTATTTTTGGACATACATTTTATCCTAAAATACCCTTACATTTCTATCTAATTACCAAAATACCTAAAGATTCTACCCATATTCCCACCTAATTTTCCCCACCCATAATATTTAATTCTTTTCCCTTCCCCATATACCCACTCTCTCACCTCCTTTATCACCCATCATTATCACTCCTCTCTCTTACCTTATTTCTTTATTATATTCTCACTCCTTTATTTATTATAATCTCTTATACCCAATCATTACACTTATACCCATACAAACCAATATTTCAATTTTCTTAAAAACCACATCAGATTCCAAATGGATACATCAAAAAGAAATGGAGGGAGTAGTATATTATGCGATAATGTTCTTTATTTAAGTCCTTGTTTGAGAATCGATTATTGTCTTTTTATTTTTTTTTGTTTCTTTTTCAACTATTTTTATTTTTGACCTTTTGAGAATCAATTATTGTTTGTTTTTTGTTTTGTTTCTTTTTTCAACTTTTTTTTTTCTTAAATGGAGTATTTTTTCCAATCAACATACATTAATTGAAACAACTTACAGCACCATACATAAACTATTGAGTCATTAAAAACCCTTACACTGCACACAAACACAAACTATTAAAACGAGCTTTTTTTTTTTTAAAAGGAAAATTAGTGCCAATTTATTAATCTAGGGACAAAGCGTCCGACAAAACATAAGGAGAAACCTCACATGGACTATGATTTTCCCAAATTTATTCCGTTCCAAATGGCACTAATCTAGCTAGGTGATGGGCTACAAAATTACCCTCCTTTTAACATGCGACACGAGCTTTAATAGTCGATACAAACCAAATTAAAAGTTGTAATCTAGTACATCAAGGGGTCTTAATTGATTGTTGGATGAACCTCTCATGTTTAGGCGACGATGAATATGAAACCGGTCAAAACCAATCTTACTAGTTGTTTATATTGAATGTTTATGTTGATTATTTGACTATTGATTGTTTTAAGATATGTTTGACTAGTGATTGTTTAAAGTATGTTTGGCAAAATCATAGGTTGGTTCTTTTATATAAAATGCCCTTAAAAGTAACCAAGGAGTAACGACGTTGGCATGGACAATATATTTTTTCTCACGGTAATACTAGTTCACTCAAAATGATCTATTTTTTCTTCGTAAATTTTCATTACTACTCCGTATCTATTGTCATTTGAGAAGTGGTATTGGGTGAAAATGTAAATTTATGAAGATTACACCATTTTGAGATAAGTTTTATTACCACAGACATTATGATGAGAAAATTTATGAAGAAAAACACCACTTACCAAATGACACTTAAATTTATTCTTGTTCCCCCATTTATTACCAGCTACCAAACTGACATTAGTAAATTATACAGTACTTCGTATATCCAATCCTATTAGGGATTACTCCAATTAGCTTGTGTGCTATTATTTCCTTCTTTTAACATGTTACATGTACAAGTAATTAGTAATATGTACTACTTGAGCAACAATAGGTGCAAATTCATTCATGTCTCACTCATATAACGACTAATGACTTAAATTTGCGTGCATGATATTAAATATAAAGAATAAAAAAGAATGAAGGGAGTAACAATTAATGGTGCAAATGATGTTACATATATGTATGAATGTATTTGTAGCGTTTCTTGCCATCAGAGTTTGGCATGGACCCAGCAAAAATGGGACATGCACTTGAGCCAGGAAGAGTTACATTTGATGAGAAAATGATTGTGAGAAAAGCAATTGAAGAAGCTCAAATCCCATACACTTATGTAATTGCTAATTGTTTTGCTGGCTATTTTGTGGGCAACCTTTCTCAAATGACCGGTCTTCTTCCTCCCAAGGAAGATGTTTTTCTATATGGAGATGGCAATGTCAAAGGTACTTTCTATTCAACCTCTTACTCATAAATCATACTCCATCCGTCCCTTAATACTCGACCTGTTTTGATCGGACACGTTTGTCAATGTACAACTTTGATTATCAATTTCTTTAACTACAAATTATAAAAACTTATAAAAATATTAATATTTTGAAAATATATATTAAGATGAAGCCAACAATATATTATATACTAACATTTGTTTTCATATACTAGAAACAAAATAGGGTCAAAGTGAATTATGTGAATAGTGCAAAAAGTCAAACTGGGTCGAGTAATTATCTCCGTTGAGAAGGAGGGAGTAATTATCTCCGGTTGTGATTTAGTAAAATGTGAATTATGCACTCAGGTGCACAATGTTCACTGTGCACCTTGTTTTTAAATGAACATATAGTTCAAATTCAAAAAACATATATACTACCTCCGTTCTTAAAAGTTCTTTACGCCTTGAAATATGTGTCCAAAGTATGAAAACTTTGACCGTAAATTCTCACTATTATATACATCAAAATGTTATCATGTAAGATCTTGTTAGATTGGTCTCGATATGTATTTTCAGAATATCAACTTTTTATAAAAAAAAAATCACATACGGAATTAGATATATTATTGGTTAAATATTGCACCAGAGTCCGTGTGAATAGTAAGTGTAAAGAACTTTAAGAGACGGAGGTAGTAATTCAAATCAAAGAACATATGGTAAAATATTCTACTTGTACGTGTACATTGAAATCATACTACATACTTCATACTACCTCTGTTTCATAAAGTTTTTTACGCTTTGAAAAATGTGCCCAAAAATCAAAACTTTGACCCTAAATTCTCACTATTACATCTATAAAAAATTATCATAAGATATCTTGTTAGATTTGTCTCAAAATGTATTTTAAAAATATCAAATTTTTATAATTTTTTGCCATACAGAATAGGATATATTAACGGTCAAACATTGCACCGAAGTCCGTGCAAATAGTAAGTGTAAAGATCTTTTTGAAACGGAGGTAGTATTAATTAGGTGTCCAATAAGTGTTCATCACAGGGCACAGTAAACAATGTTCACACCCGGGTGTATAATCCAAATTTTACCGATTCAATCAATCACATTACTAAATAGTTCAGATTAAATGAGACACATAGTGTAATGTACTCCGTAGTAAATATATGTAGTACTAGTATTAGACTATTAGTAGTAAATTTGATGATCTAAACTTAATTGTATGATAGCATGCTTCATGGACGAAGAAGATGTTGCAACATACACTATCAAAACTATAGACGACCCTCGTACTTTAAACAAGACAATTAACATCAGACCTTCTGAAAATATATTGTCTCAAAGGGAGTTGGTTGAGACGTGGGAGAAACTCACAGGAAAGGAGCTTAACAAACACACCATCTCCGCAAAGGATTTTCTTGCCCCTATGAAAGGTAAGATTATCAATTTACCATTACACTTGTGAATTTATAATACGGCTTATCCTAATACGGGTGTTTGGGACTCGTACATATAATAATAACATTGTATACTAGTACACTGACAATTTTGTGTAAGACCGCCTTATCGGAAATACCACTTTAATTGGTTAACTAATTATTTTCATTTCTTAACTAATTGGTTTCAGTTTTTAACTAATTAGTTCAAGTGCTTAACTAATTGGTTCAATTGCTTAACTTATACGACATCAATGTGGTATGTCTTTTGTGTAAGACCGTTTTATATAAAAGTTTGTACTGATACAATTACGAGTATATTCTTAGTATCCTCTATTACACCTCTTAATCTGTGCAGGGGGACCACGTGCAAGTTAGTTCTTAAAAACTCAAAATGTTGACCCGACAAACTTTTCATAAAGATGTCGGCTACTTATAACTCAATAGGGGACTTAATCTCTACTCTCCTTAATAAAATGATAATCTATGTTGATATGTTTGCTACAATCATGCTGAACTGAATTCACTGCAAGAAAGGACACAATGACATTATCACATAATAACTTCACTCATATACTTCGTAAATAGTAATATCATACACTAGTACGTACAATTACAAGTATACACTTACTATATTCTATTGACATTATCCCGATATTTAATAAAATTGGGATGATTAAGTTTGTTGTATACATTTGATAATTGTTTAACATTTGATATGAATATTCAGATGGAGAATATGCACACCAAGTGGGAATTGGACATTTTTACCACATTTATTATGAAGGTTGTCTTACTAATTTTGAGGTACCAGATGATGAAGAAGCTTCCAAACTCTATCCCGAGGTTGAATACACACGAATGAATGATTACTTGAAGCGTTATCTGTGAAAAACAATACTTCGTACGTACTGCGGTCTAAGTAGTACTTTCTCCGTCTTTTAATACTCGCAACGTTTGGACTTTTGCCACTATTCATATAATCTACTTTGACTATTCTTAGTGCTTTTTATATAAGATAAAACATAGTAATGTGGAATCTTGTTAGATTCGTCTCAATGTGTATTTTCAAAATATCAACTTTTTATAATTTTTGCATAAAGAGAATTTAAGATATAAATGATCAAAGTTAAGCATTGGCATGCGTGAAACTAACAAACGTTGCGAGTATTAAAAGACGGAGGAAGTATAAGATGTTCTTTTATCGATCGATGGTTGTATTGCCTTGTTTGTTTCTCTTGGATTATGAACTTTCGGTCACTTGGTGTTTATTGTACAACTTCTGTAACCCTAAAGATCTTAAAACTCCAAGTTTGAACTATCTTTTGGCTCGGCTCTAAAGTTCATGAATGGGTTCGAGTATGTCTAACGTATTTAGTATTTTCTCAAAGTTCAAAAATGGTGTGTGAC ATGTCTGGTGTTCATTTTAGAAGCCATAACATTTTGTTGCAACTTAAGCTTGTTGAGGCTATTAAGGAGGCTGGAAATGTCAAGCGTTTCTTGCCATCAGAGTTTGGCATGGACCCAGCAAAAATGGGACATGCACTTGAGCCAGGAAGAGTTACATTTGATGAGAAAATGATTGTGAGAAAAGCAATTGAAGAAGCTCAAATCCCATACACTTATGTAATTGCTAATTGTTTTGCTGGCTATTTTGTGGGCAACCTTTCTCAAATGACCGGTCTTCTTCCTCCCAAGGAAGATGTTTTTCTATATGGAGATGGCAATGTCAAAGCATGCTTCATGGACGAAGAAGATGTTGCAACATACACTATCAAAACTATAGACGACCCTCGTACTTTAAACAAGACAATTAACATCAGACCTTCTGAAAATATATTGTCTCAAAGGGAGTTGGTTGAGACGTGGGAGAAACTCACAGGAAAGGAGCTTAACAAACACACCATCTCCGCAAAGGATTTTCTTGCCCCTATGAAAGATGGAGAATATGCACACCAAGTGGGAATTGGACATTTTTACCACATTTATTATGAAGGTTGTCTTACTAATTTTGAGGTACCAGATGATGAAGAAGCTTCCAAACTCTATCCCGAGGTTGAATACACACGAATGAATGATTACTTGAAGCGTTATCTGTGAAAAACAATACTTCGTACGTACTGCGGTCTAAGTAGTACTTTCTCCGTCTTTTAATACTCGCAACGTTTGGACTTTTGCCACTATTCATATAATCTACTTTGACTATTCTTAGTGCTTTTTATATAAGATAAAACATAGTAATGTGGAATCTTGTTAGATTCGTCTCAATGTGTATTTTCAAAATATCAACTTTTTATAATTTTTGCATAAAGAGAATTTAAGATATAAATGATCAAAGTTAAGCATTGGCATGCGTGAAACTAACAAACGTTGCGAGTATTAAAAGACGGAGGAAGTATAAGATGTTCTTTTATCGATCGATGGTTGTATTGCCTTGTTTGTTTCTCTTGGATTATGAACTTTCGGTCACTTGGTGTTTATTGTACAACTTCTGTAACCCTAAAGATCTTAAAACTCCAAGTTTGAACTATCTTTTGGCTCGGCTCTAAAGTTCATGAATGGGTTCGAGTATGTCTAACGTATTTAGTATTTTCTCAAAGTTCAAAAATGGTGTGTGAC ATGTCTGGTGTTCATTTTAGAAGCCATAACATTTTGTTGCAACTTAAGCTTGTTGAGGCTATTAAGGAGGCTGGAAATGTCAAGCGTTTCTTGCCATCAGAGTTTGGCATGGACCCAGCAAAAATGGGACATGCACTTGAGCCAGGAAGAGTTACATTTGATGAGAAAATGATTGTGAGAAAAGCAATTGAAGAAGCTCAAATCCCATACACTTATGTAATTGCTAATTGTTTTGCTGGCTATTTTGTGGGCAACCTTTCTCAAATGACCGGTCTTCTTCCTCCCAAGGAAGATGTTTTTCTATATGGAGATGGCAATGTCAAAGCATGCTTCATGGACGAAGAAGATGTTGCAACATACACTATCAAAACTATAGACGACCCTCGTACTTTAAACAAGACAATTAACATCAGACCTTCTGAAAATATATTGTCTCAAAGGGAGTTGGTTGAGACGTGGGAGAAACTCACAGGAAAGGAGCTTAACAAACACACCATCTCCGCAAAGGATTTTCTTGCCCCTATGAAAGATGGAGAATATGCACACCAAGTGGGAATTGGACATTTTTACCACATTTATTATGAAGGTTGTCTTACTAATTTTGAGGTACCAGATGATGAAGAAGCTTCCAAACTCTATCCCGAGGTTGAATACACACGAATGAATGATTACTTGAAGCGTTATCTGTGA MSGVHFRSHNILLQLKLVEAIKEAGNVKRFLPSEFGMDPAKMGHALEPGRVTFDEKMIVRKAIEEAQIPYTYVIANCFAGYFVGNLSQMTGLLPPKEDVFLYGDGNVKACFMDEEDVATYTIKTIDDPRTLNKTINIRPSENILSQRELVETWEKLTGKELNKHTISAKDFLAPMKDGEYAHQVGIGHFYHIYYEGCLTNFEVPDDEEASKLYPEVEYTRMNDYLKRYL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17458.1 vs. NCBI nr
Match: gi|902231516|gb|KNA22290.1| (hypothetical protein SOVF_035310 isoform A [Spinacia oleracea]) HSP 1 Score: 474.2 bits (1219), Expect = 1.300e-130 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo17458.1 vs. NCBI nr
Match: gi|731332927|ref|XP_010677468.1| (PREDICTED: isoflavone reductase homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 409.1 bits (1050), Expect = 5.200e-111 Identity = 196/229 (85.59%), Postives = 209/229 (91.27%), Query Frame = 1
BLAST of Spo17458.1 vs. NCBI nr
Match: gi|702340189|ref|XP_010056197.1| (PREDICTED: isoflavone reductase homolog [Eucalyptus grandis]) HSP 1 Score: 385.2 bits (988), Expect = 8.000e-104 Identity = 182/227 (80.18%), Postives = 207/227 (91.19%), Query Frame = 1
BLAST of Spo17458.1 vs. NCBI nr
Match: gi|702340211|ref|XP_010056201.1| (PREDICTED: isoflavone reductase homolog isoform X1 [Eucalyptus grandis]) HSP 1 Score: 378.6 bits (971), Expect = 7.500e-102 Identity = 178/227 (78.41%), Postives = 205/227 (90.31%), Query Frame = 1
BLAST of Spo17458.1 vs. NCBI nr
Match: gi|719999380|ref|XP_010255702.1| (PREDICTED: isoflavone reductase homolog [Nelumbo nucifera]) HSP 1 Score: 376.3 bits (965), Expect = 3.700e-101 Identity = 176/229 (76.86%), Postives = 207/229 (90.39%), Query Frame = 1
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRW7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035310 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 9.200e-131 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHB9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g107720 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 3.600e-111 Identity = 196/229 (85.59%), Postives = 209/229 (91.27%), Query Frame = 1
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Match: A0A059C3G8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01253 PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 5.600e-104 Identity = 182/227 (80.18%), Postives = 207/227 (91.19%), Query Frame = 1
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Match: A0A059C4E6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01255 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.200e-102 Identity = 178/227 (78.41%), Postives = 205/227 (90.31%), Query Frame = 1
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Match: D7TXR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00460 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.400e-101 Identity = 182/230 (79.13%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.400e-100 Identity = 172/230 (74.78%), Postives = 202/230 (87.83%), Query Frame = 1
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Match: PILR1_ARATH (Pinoresinol reductase 1 OS=Arabidopsis thaliana GN=PRR1 PE=1 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.700e-96 Identity = 166/229 (72.49%), Postives = 193/229 (84.28%), Query Frame = 1
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Match: PILR1_LINPE (Bifunctional pinoresinol-lariciresinol reductase OS=Linum perenne GN=PLR_Lp1 PE=1 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.800e-94 Identity = 164/232 (70.69%), Postives = 194/232 (83.62%), Query Frame = 1
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Match: PILR1_LINCY (Bifunctional pinoresinol-lariciresinol reductase OS=Linum corymbulosum GN=PLR_Lc1 PE=1 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 8.600e-90 Identity = 154/229 (67.25%), Postives = 189/229 (82.53%), Query Frame = 1
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Match: PILR1_FORIN (Bifunctional pinoresinol-lariciresinol reductase OS=Forsythia intermedia GN=PLR_Fi1 PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 3.300e-89 Identity = 158/230 (68.70%), Postives = 194/230 (84.35%), Query Frame = 1
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Match: AT1G32100.1 (pinoresinol reductase 1) HSP 1 Score: 352.1 bits (902), Expect = 2.700e-97 Identity = 166/229 (72.49%), Postives = 193/229 (84.28%), Query Frame = 1
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Match: AT4G13660.1 (pinoresinol reductase 2) HSP 1 Score: 327.4 bits (838), Expect = 7.000e-90 Identity = 152/229 (66.38%), Postives = 188/229 (82.10%), Query Frame = 1
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Match: AT1G75290.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 192.6 bits (488), Expect = 2.700e-49 Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 1
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 183.0 bits (463), Expect = 2.100e-46 Identity = 99/225 (44.00%), Postives = 136/225 (60.44%), Query Frame = 1
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Match: AT1G19540.1 (NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 177.9 bits (450), Expect = 6.900e-45 Identity = 97/223 (43.50%), Postives = 139/223 (62.33%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17458.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17458.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17458.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17458.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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