Spo17491 (gene) | SpinachBase

Overview


Name	Spo17491
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr6 : 46044508 .. 46049087 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTATAAGTAGGATTGATTACAAAATGAGTCTCTAGTAGTTTAGTTTGTTTTAGTTTGTTGTTGTTGTAATTGGTGAATTTTGTTTAAATTAATGCACATTGACCTTATGTTAAAAAAAAAGAAAAAAAAAAACTAGGATTGATTACAAAATGAGTCCGCTTACAAGCTACGAGATTGACTTAATTGAACCTCAAATTGTGTTCGAACTTCAGTGGAGATTTTCATGAATTGAGAACCATTCCGATCTTGACGTAACTCTAATTTTTCAGTGTAATTTCATAAATTAGAATTATTATTTTTACATAGAATTATTATCATGTTTTGTTTCTCAACTTTCTCTTTAATGCCAACATGATTATTATAATTATAAACTAAAAAAAATATACAGAGTAATATTTTATCTCTTCTCTTCCCAACACCAACAATTTTTGCATATGTTTAACAAACACCAAAAATATATCCCTCTCTTATTTCATCCTTACCCCACCTCCTTTTATTTACGATGATCTTGTTATTTGAATAAGTATATAATCAAATTTATTAGTGACATAATTAATCGTTACGGAATATTAATTAGTTTAGTAAAGTATATTTTGAAGATTGAGTTCAAGAGACATGTTAGTACGACACATATTCAACATCAAACCTATTTTACACATGTTTTCAATTTGTAATCATTAGACCAAGATCTTATTGATATGTATTTCATGATAGTACAACACATTCTCAACATCAAATTAACCTATTATACACAGACTCTCAATTTTAACCACTAAACCAAGACCTCAGTGGTATGTATTTTATTACGTTGTAAGTTTGTAACTAATCTTGCTATATTACCTTATCAATATTGGATTTATCTTAATTTCTCAAAAATAAAAGAAAAAAGTCCAATTTTAAAAAATATATACTTCGTATTTTATTTTCCCTTTCGTATTTTTGAGAGGCAATAATCGTTAAACAAAACCTTACCCAAATTTCCCCACTTCATTTGTTGAGCAGCAGCAAGAACAGCAACTTCACCACTGCACTTCATCTTCCCCCAAAAAAATCAATGGCTTCCCTTTCTCTCTCCTCCACCCTCTCTCCTAACTTCCTCCCTCAAACCCCATCTTCTTCTTCCCCCAAACTTCGCAAATCTCTCCCCAAAACCCCATTTTTCAAACCCATTTCTTCGCCTTCACTTCGCGCACACTCGTCCCTTCAATTACACCCACCAACCCTAAATTCTCTTGGGCTGAATGACATTGGGTTGGGACCCATCATGGGTTCGGCCCAACAGACGCCGGAGAGCGCCATGAGAGGTGCTGAAGCTGATGTGATGGGGTTGCTTTTGAGAGAGAGGATTGTGTTTCTGGGAAGTGGTATTGATGATTTTGTTGCTGATTCTATTATTAGTCAATTGATGTTATTGGATGCACAAGACCATACCAAGGATATCCGCCTTTTCATCAATTCTCCTGGTGGTTCTCTTAGGTATGAGATTTTTTCATAATTCTCACTATGATTTTTGGATTGTTTTAGCTTTAATTTAATGTTGCTTTGGTTTTTATATGCTGGGGTTTTTCTCGGAGAGGATAAATTGTTGTTAATTGTATTTTTGATAGTGTTATTTGCATTGTTGGTATCAAATTGGACATGCCCTTGTTCTGTTTTCGGAACATTGCTCAGTGATAATTGTGGTAATGGTTATAGAATGAATGGGAATGTGAAATTTGTTAAAGGGGTGGAAAATGGGAAGAGTGTTTATTTCTGAGGTAATTAATTGTTGGTTTGTTTGCCTTTTTAGTGAGTAAATTGTGTTAGCTGCACTAATGAGCTCAATTTGAACACACCCTTGTTGTTAATCAATATTTATTTTAAAATGGTTTAATGGGAATGTGAAATTTTGTCAAGGCTACAATTTGGGAAGATTTTAGGTGTCTAATGTGGAAAATGTGAGAGATGATCCCTTGCTTATTCAAAGGAAATGTAAAGCCTAGTATGACATAGCCTCAAAATTACTTCATGTAAGACTGTTTATTTCATCCTATTTTAGGGGTAACTTTTTGGATCGGTGATATGTTTTTGGGGGCTGATATGTTTCTTTGGTTTGGTGATTTTCCATGTCTGTTTGAGGATTAGCTCCTAGTTTAGCTAAGGCTTTTGGGAAGGAAGGCCAAGTAAAATGTGGAGATATTATACATTTATACCTCTTTCTTGGTTTTGCCTAGTTGATTCACACAATCCCACATCCTTTTTGGTGCTTTCTCTCGACTTGTTCGTTAGAGTACTTGCCACTACTTTATTGGATGTTTCTTCTGCATCCTTTTCTATTCTTTACATCTCTGAAGTGATTAAGTCACTGGAGAAGTGTTTGTTCGGACTTTGAAAAGCTTTGGACGTACAAGAGCTTGTTTATAATTGATTGGATTCTGTGTACTTTCCTACAGAATTAAGTTATTTTGGTTGGAGCCCTTGGAGATTTTCATGTAAAGATGTTTCATGGAGAAAGCAGTTTAATAGGATTCATCTCTAGACCGTACAAAATAGTATATTCCTACCCGACCATTAAAGAGGAAAGTTTATGTTACATTTTTTTTTTACCTTGGGGGACATATTGCATAGGTGCTAGGTAAAGATAGGTTGTTTTTGAATTTATCAGTTGGTACCTAAAGTCATGGTTAAGGCGTAAGAGAAGTGTAATAAGATGTGAAATGGACCCTATGATCTACTTGAAAGAAAACTATACCTAGTTTAAGCTTGCTCTAAGACCTCATCTTTGGAATAGTATTGAGGTGGAAAGGTAATCTACTAGAAATGAGTTGGTCAGGGAGAATGGCATAGGTGAAACGGAAAGAGGAGGTGAGACATCCCCAAGTCTTACTCATTCAACATGGCATGATTGTCGATGCTACATGAAACTTTAGGTTTTAATTATAAGCTGCTCCCAGTCATCGCTATCTGACTCATACATGTTACAGAAAATTCAAGTTTGAATGATTGGGCAGTCTTTTAGGAGATTATAGTGTTGGCTGGATTACAGAGCATGAGAGATTGAGAGCTATTGGTTAAGTGGTTAATCTTTGATATGGAGAGTATTTCCGTTCATTGGTTTGACTACATGATTTTTGTCAATTAGCATGTGAGAAGTGAAGCATTTGATATGATTGCTTCACAGTAGAAGTCAGTGTTACACCACTTTAGCATTGTAGACCTTGTCATTTGAATCCAAAATTTGTGTTTACGTCTGGAGTTTTGTGACTTTTTACCAGTTTCAGCTCAAGGTGTAGATATCTTCATTGAAATTGTCTGCCTACCTATTATCTATCATGGATCCACATCAAAAGTTGATAAAGAAATAATTAATTCCATCCTAGCATGTTATCGGTAGTTGCTTATAAGAAGAGTATGGTAATTACATTTTGCTAAACATATGTTGGGTGTGTATACTGGAGGCTAGCTAAAAGAAAGCATGCAATGGCTTACTTTCCTCTTGCTTTAGTCATTTCACCTTTTCCTCTCAGGGAGCTAATGCGTTCAGTGTATAGCTCTTTAACCTTGGTGCCGGTATGTCGGAAAAATGATTTGTATCATTGTATGCATATTTACATCCCGTTTAATGGTAAAAATTCAGCTGCTAATTATAATACTGTCGATTCATGAGTACTTTTTGTGGATATGGTGGGGGTCATGATCATAAGATGCTTTCTACTACAAGAATAGGTTCTTTTTTTGTGGCCGATTAGGACAAGGATCTATATTCACTTTGTTAGAGAGAAAGATAAGGTTGTTCCTTGAAGACATGGGTCTCGACATGCTAGACTTAGGTTAAATTACAAATAATACTTGTATTTGTATGTTCAATTCTCCACTTAACAGCTTTCTTTGATCCTTGAAGTGTACAAAATACTGACAGAACTAAAACCTAAATTCTTTACTTGTTTCATCACTTTCATGTGATATGGGATTTCAGCCTTGTTCTTTACATGGTTAATTGATGATGATGAACATGAACCTAACAAAAACTTGTGCCTCGTTGAATTTGAAACGAAATGCTGTATATTCATCGAATGCATAAATGATGGCTTTTTTGGTCTTGTCTGTTAGTGCGACGATGGCCATCTTTGATGTTGTGAGGCTTGTGCGGGCAGATGTGTCGACTCTTGCTCTTGGAATTGCTGCATCAACAGCTTCAATAATTCTTGGTGCTGGGGCTAAAGGGAAACGTCTTGCAATGCCCAATGCAAGAATAATGGTTCATCAACCTCTTGGAGGAGCTAGTGGACAAGCAATTGATGTTGAAATTCAAGCCCGAGAAATCATGCACAACAAGAATAATATTACACGAATTATTTCTGAGTTTACTGGTCGGTCATTTGAACAAGTAGAAAAAGATATTGATAGAGATCGTTATATGTCTCCTATTGAAGCAGTTGAGTATGGGCTTATTGATGGGGTTATTGATAAAGACAGCATTATTCCACTTGAACCTGTTCCAGATAAAGTGATATCCAATTTCAACTATATGGAGATCAGTAAAGATCCTAAAAAGTTCCTGACACCAGAAATTCCTGATGATGAGATATACTAG

mRNA sequence

ATGGCAATAATCGTTAAACAAAACCTTACCCAAATTTCCCCACTTCATTTGTTGAGCAGCAGCAAGAACAGCAACTTCACCACTGCACTTCATCTTCCCCCAAAAAAATCAATGGCTTCCCTTTCTCTCTCCTCCACCCTCTCTCCTAACTTCCTCCCTCAAACCCCATCTTCTTCTTCCCCCAAACTTCGCAAATCTCTCCCCAAAACCCCATTTTTCAAACCCATTTCTTCGCCTTCACTTCGCGCACACTCGTCCCTTCAATTACACCCACCAACCCTAAATTCTCTTGGGCTGAATGACATTGGGTTGGGACCCATCATGGGTTCGGCCCAACAGACGCCGGAGAGCGCCATGAGAGGTGCTGAAGCTGATGTGATGGGGTTGCTTTTGAGAGAGAGGATTGTGTTTCTGGGAAGTGGTATTGATGATTTTGTTGCTGATTCTATTATTAGTCAATTGATGTTATTGGATGCACAAGACCATACCAAGGATATCCGCCTTTTCATCAATTCTCCTGGTGGTTCTCTTAGTGCGACGATGGCCATCTTTGATGTTGTGAGGCTTGTGCGGGCAGATGTGTCGACTCTTGCTCTTGGAATTGCTGCATCAACAGCTTCAATAATTCTTGGTGCTGGGGCTAAAGGGAAACGTCTTGCAATGCCCAATGCAAGAATAATGGTTCATCAACCTCTTGGAGGAGCTAGTGGACAAGCAATTGATGTTGAAATTCAAGCCCGAGAAATCATGCACAACAAGAATAATATTACACGAATTATTTCTGAGTTTACTGGTCGGTCATTTGAACAAGTAGAAAAAGATATTGATAGAGATCGTTATATGTCTCCTATTGAAGCAGTTGAGTATGGGCTTATTGATGGGGTTATTGATAAAGACAGCATTATTCCACTTGAACCTGTTCCAGATAAAGTGATATCCAATTTCAACTATATGGAGATCAGTAAAGATCCTAAAAAGTTCCTGACACCAGAAATTCCTGATGATGAGATATACTAG

Coding sequence (CDS)

ATGGCAATAATCGTTAAACAAAACCTTACCCAAATTTCCCCACTTCATTTGTTGAGCAGCAGCAAGAACAGCAACTTCACCACTGCACTTCATCTTCCCCCAAAAAAATCAATGGCTTCCCTTTCTCTCTCCTCCACCCTCTCTCCTAACTTCCTCCCTCAAACCCCATCTTCTTCTTCCCCCAAACTTCGCAAATCTCTCCCCAAAACCCCATTTTTCAAACCCATTTCTTCGCCTTCACTTCGCGCACACTCGTCCCTTCAATTACACCCACCAACCCTAAATTCTCTTGGGCTGAATGACATTGGGTTGGGACCCATCATGGGTTCGGCCCAACAGACGCCGGAGAGCGCCATGAGAGGTGCTGAAGCTGATGTGATGGGGTTGCTTTTGAGAGAGAGGATTGTGTTTCTGGGAAGTGGTATTGATGATTTTGTTGCTGATTCTATTATTAGTCAATTGATGTTATTGGATGCACAAGACCATACCAAGGATATCCGCCTTTTCATCAATTCTCCTGGTGGTTCTCTTAGTGCGACGATGGCCATCTTTGATGTTGTGAGGCTTGTGCGGGCAGATGTGTCGACTCTTGCTCTTGGAATTGCTGCATCAACAGCTTCAATAATTCTTGGTGCTGGGGCTAAAGGGAAACGTCTTGCAATGCCCAATGCAAGAATAATGGTTCATCAACCTCTTGGAGGAGCTAGTGGACAAGCAATTGATGTTGAAATTCAAGCCCGAGAAATCATGCACAACAAGAATAATATTACACGAATTATTTCTGAGTTTACTGGTCGGTCATTTGAACAAGTAGAAAAAGATATTGATAGAGATCGTTATATGTCTCCTATTGAAGCAGTTGAGTATGGGCTTATTGATGGGGTTATTGATAAAGACAGCATTATTCCACTTGAACCTGTTCCAGATAAAGTGATATCCAATTTCAACTATATGGAGATCAGTAAAGATCCTAAAAAGTTCCTGACACCAGAAATTCCTGATGATGAGATATACTAG

Protein sequence

MAIIVKQNLTQISPLHLLSSSKNSNFTTALHLPPKKSMASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17491.1	Spo17491.1	mRNA

Homology

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BLAST of Spo17491.1 vs. NCBI nr
Match: gi|902231529|gb|KNA22303.1| (hypothetical protein SOVF_035430 [Spinacia oleracea])

HSP 1 Score: 565.8 bits (1457), Expect = 4.900e-158
Identity = 297/300 (99.00%), Postives = 300/300 (100.00%), Query Frame = 1

		  
Query: 39  ASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG 98
           ++LSLSSTLSPNFLPQTPSSSSPKLR+SLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG
Sbjct: 8   STLSLSSTLSPNFLPQTPSSSSPKLRQSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG 67

Query: 99  LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD 158
           LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD
Sbjct: 68  LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD 127

Query: 159 AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR 218
           AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR
Sbjct: 128 AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR 187

Query: 219 LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD 278
           LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD
Sbjct: 188 LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD 247

Query: 279 RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY 338
           RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY
Sbjct: 248 RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY 307

[Close]

BLAST of Spo17491.1 vs. NCBI nr
Match: gi|731332968|ref|XP_010677485.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 500.7 bits (1288), Expect = 1.900e-138
Identity = 272/314 (86.62%), Postives = 288/314 (91.72%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKP---ISSPSLRA---HSSLQLHP 97
           M+SLSLSSTLSP+FLPQTPSSSS K R+S  K+PFFKP   ISSP+LR+    SSLQL  
Sbjct: 1   MSSLSLSSTLSPHFLPQTPSSSSLKFRQSFSKSPFFKPNFHISSPTLRSTTPQSSLQLQS 60

Query: 98  PTLNS-------LGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDD 157
            TLNS       LGL+DIGLGPIMGSA QTPE++MRGAEADVMGLLL+ERIVFLGSGIDD
Sbjct: 61  TTLNSPSFQPINLGLDDIGLGPIMGSATQTPETSMRGAEADVMGLLLKERIVFLGSGIDD 120

Query: 158 FVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS 217
           FVAD+IISQL+LLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS
Sbjct: 121 FVADAIISQLLLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS 180

Query: 218 TASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 277
           TASIILGAG KGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT
Sbjct: 181 TASIILGAGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 240

Query: 278 GRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDP 337
           GR FE++EKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLEPVPDKV S FNYMEISKDP
Sbjct: 241 GRPFEEIEKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLEPVPDKVKSTFNYMEISKDP 300

Query: 338 KKFLTPEIPDDEIY 339
           KK+LTPEIPDDEIY
Sbjct: 301 KKYLTPEIPDDEIY 314

[Close]

BLAST of Spo17491.1 vs. NCBI nr
Match: gi|743775407|ref|XP_010918084.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Elaeis guineensis])

HSP 1 Score: 396.0 bits (1016), Expect = 6.700e-107
Identity = 229/320 (71.56%), Postives = 252/320 (78.75%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNS- 97
           M SLS+S+ L P+FLP    S  PK  K  P+T  +K  S P++RA  S    PPT +S 
Sbjct: 1   MTSLSVSAPLKPSFLPSR--SIPPKTLK--PRTLLYKS-SPPTVRALISSS-SPPTRSSS 60

Query: 98  --------LGLNDIGLGPIMGS----------AQQTPESAMRGAEADVMGLLLRERIVFL 157
                   LG    G     GS          A QTP +AM+GAEADVMGLLLRERIVFL
Sbjct: 61  HGGTFGLGLGEETQGYSSSHGSSLYVSSPYFTAPQTPATAMKGAEADVMGLLLRERIVFL 120

Query: 158 GSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLA 217
           GS IDDFVAD+IISQL+LLDAQD TKDIRLFINSPGGSLSATMAI+DVV+LVRADVST+A
Sbjct: 121 GSSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVA 180

Query: 218 LGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITR 277
           LGIAAST SIILG G KGKRLAMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNNITR
Sbjct: 181 LGIAASTTSIILGGGTKGKRLAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNITR 240

Query: 278 IISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYM 337
           IIS FTGR+FEQV+KDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVP++V    NY 
Sbjct: 241 IISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPERVKPKLNYE 300

Query: 338 EISKDPKKFLTPEIPDDEIY 339
           EISKDP+KFLTPEIPDDEIY
Sbjct: 301 EISKDPRKFLTPEIPDDEIY 314

[Close]

BLAST of Spo17491.1 vs. NCBI nr
Match: gi|698504802|ref|XP_009797898.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 393.3 bits (1009), Expect = 4.400e-106
Identity = 225/314 (71.66%), Postives = 252/314 (80.25%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNF--LPQTPSSSSPKLRKSLPKTPFFK-PISSPSLRAHSSLQL---HP 97
           M SL+LS++LSP+   L     SS PKL  +    P  K P+SS      SS Q     P
Sbjct: 1   MDSLTLSTSLSPHCSSLNLRHGSSIPKLPPTFCPHPSRKNPLSSLKSSLTSSHQQPASKP 60

Query: 98  PTLNSLGLN-------DIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDD 157
           P  +SL LN       D  L  ++ S+ QTP++AMRGAEAD MGLL RERIVFLGS IDD
Sbjct: 61  PPSDSLILNPNFETGEDDKLSLLLASSPQTPDTAMRGAEADAMGLLFRERIVFLGSQIDD 120

Query: 158 FVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS 217
           F+AD+IISQL+LLDA D +KDIRLFINSPGGSLSATMAIFDVV+LVRADVST+ALGIAAS
Sbjct: 121 FIADAIISQLLLLDAMDSSKDIRLFINSPGGSLSATMAIFDVVKLVRADVSTVALGIAAS 180

Query: 218 TASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 277
           TASIILG G KGKR AMPNARIM+HQPLGGASGQAIDVEIQAREIMHNK+N+T+IIS  T
Sbjct: 181 TASIILGGGTKGKRFAMPNARIMIHQPLGGASGQAIDVEIQAREIMHNKDNVTKIISNCT 240

Query: 278 GRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDP 337
           GRS+EQV+KDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLEPVP++V S  NY EISKDP
Sbjct: 241 GRSYEQVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLEPVPERVKSTLNYQEISKDP 300

Query: 338 KKFLTPEIPDDEIY 339
           KKFL PEIPDDEIY
Sbjct: 301 KKFLNPEIPDDEIY 314

[Close]

BLAST of Spo17491.1 vs. NCBI nr
Match: gi|747042353|ref|XP_011077978.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 391.0 bits (1003), Expect = 2.200e-105
Identity = 207/260 (79.62%), Postives = 225/260 (86.54%), Query Frame = 1

		  
Query: 80  SLRAHSSLQLHPPTLNSLGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLG 139
           +L   S    H  TL S    +  L  I  SA QTP +AMRGAEAD MGLLL+ERIVFLG
Sbjct: 68  TLYPFSLTSFHHQTLTSSPWPESLLLQISSSAPQTPATAMRGAEADAMGLLLKERIVFLG 127

Query: 140 SGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLAL 199
           + IDDFVAD+IISQL+LLDAQD TKDIRLFINSPGGSLSATMAIFDVVRLVRADVST+AL
Sbjct: 128 NNIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTVAL 187

Query: 200 GIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRI 259
           GIAASTASIILG G KGKR AMPN RIM+HQPLGGASGQAIDVEIQARE+MHNKNN+TRI
Sbjct: 188 GIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREVMHNKNNVTRI 247

Query: 260 ISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKV-ISNFNYM 319
           IS+FTGRSFEQVEKDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVP++V  S FNY 
Sbjct: 248 ISDFTGRSFEQVEKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPERVKSSTFNYE 307

Query: 320 EISKDPKKFLTPEIPDDEIY 339
           E+SKDPKKFL P+IPDDEIY
Sbjct: 308 EVSKDPKKFLRPDIPDDEIY 327

[Close]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS56_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=SOVF_035430 PE=3 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.400e-158
Identity = 297/300 (99.00%), Postives = 300/300 (100.00%), Query Frame = 1

		  
Query: 39  ASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG 98
           ++LSLSSTLSPNFLPQTPSSSSPKLR+SLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG
Sbjct: 8   STLSLSSTLSPNFLPQTPSSSSPKLRQSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLG 67

Query: 99  LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD 158
           LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD
Sbjct: 68  LNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLD 127

Query: 159 AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR 218
           AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR
Sbjct: 128 AQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKR 187

Query: 219 LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD 278
           LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD
Sbjct: 188 LAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRD 247

Query: 279 RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY 338
           RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY
Sbjct: 248 RYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY 307

[Close]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CC95_BETVU (ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g107950 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.400e-138
Identity = 272/314 (86.62%), Postives = 288/314 (91.72%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKP---ISSPSLRA---HSSLQLHP 97
           M+SLSLSSTLSP+FLPQTPSSSS K R+S  K+PFFKP   ISSP+LR+    SSLQL  
Sbjct: 1   MSSLSLSSTLSPHFLPQTPSSSSLKFRQSFSKSPFFKPNFHISSPTLRSTTPQSSLQLQS 60

Query: 98  PTLNS-------LGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDD 157
            TLNS       LGL+DIGLGPIMGSA QTPE++MRGAEADVMGLLL+ERIVFLGSGIDD
Sbjct: 61  TTLNSPSFQPINLGLDDIGLGPIMGSATQTPETSMRGAEADVMGLLLKERIVFLGSGIDD 120

Query: 158 FVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS 217
           FVAD+IISQL+LLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS
Sbjct: 121 FVADAIISQLLLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAAS 180

Query: 218 TASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 277
           TASIILGAG KGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT
Sbjct: 181 TASIILGAGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 240

Query: 278 GRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDP 337
           GR FE++EKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLEPVPDKV S FNYMEISKDP
Sbjct: 241 GRPFEEIEKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLEPVPDKVKSTFNYMEISKDP 300

Query: 338 KKFLTPEIPDDEIY 339
           KK+LTPEIPDDEIY
Sbjct: 301 KKYLTPEIPDDEIY 314

[Close]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R6I8_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_004G175000 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.200e-104
Identity = 219/302 (72.52%), Postives = 245/302 (81.13%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLP-KTPFFKPISSPSLRAHSSLQLHPPTLNS 97
           M  LSLSS+L+P+F   +     PK + SL    P F   +  S    SSL+L P T NS
Sbjct: 1   MGLLSLSSSLTPSF---SSLHLKPKHKLSLTFPNPSFVCSAPTSTPLSSSLKLKP-TANS 60

Query: 98  LGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLML 157
           L L          SA Q+P +AMRGAEAD MGLLLRERIVFLG+ IDDFVAD+IISQL+L
Sbjct: 61  LKL----------SAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLL 120

Query: 158 LDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKG 217
           LDAQD TKDIRLFINSPGGSLSATMAI+DVV+LVRADVST+ +GIAASTASIILG G KG
Sbjct: 121 LDAQDPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKG 180

Query: 218 KRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDID 277
           KR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNN+TRIIS  TGR FEQV KDID
Sbjct: 181 KRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDID 240

Query: 278 RDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDE 337
           RDRYMSPIEAVEYG+IDGVID+DSIIPLEPVP++V ++ NY EISKDP+KFLTP+IPDDE
Sbjct: 241 RDRYMSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDE 288

Query: 338 IY 339
           IY
Sbjct: 301 IY 288

[Close]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PZ48_GOSAR (ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_15783 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.100e-103
Identity = 214/301 (71.10%), Postives = 241/301 (80.07%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSL 97
           M  LSLSS+L+P+F P        KL  + P   F    S+P+ +  SS     PT NSL
Sbjct: 1   MGLLSLSSSLTPSF-PSLHLKPKHKLSLTFPNPSF--ACSAPTSKPLSSSLKLKPTANSL 60

Query: 98  GLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLL 157
                       SA Q+P +AMRGAEAD MGLLLRERIVFLG+ IDDF AD+IISQL+LL
Sbjct: 61  KF----------SAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFAADAIISQLLLL 120

Query: 158 DAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGK 217
           DAQD TKDIRLFINSPGGSLSATMAI+DVV+LVRADVST+ +GIAASTASIILG G KGK
Sbjct: 121 DAQDPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGK 180

Query: 218 RLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDR 277
           R AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNN+TRIIS  TGR FEQV KDIDR
Sbjct: 181 RFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDR 240

Query: 278 DRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEI 337
           DRYMSPIEA+EYG+IDGVID+DSIIPLEPVP++V ++ NY EISKDP+KFLTP+IPDDEI
Sbjct: 241 DRYMSPIEALEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEI 288

Query: 338 Y 339
           Y
Sbjct: 301 Y 288

[Close]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Match: A0A059CBQ6_EUCGR (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_D00191 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.400e-103
Identity = 221/345 (64.06%), Postives = 260/345 (75.36%), Query Frame = 1

		  
Query: 3   IIVKQNLT-QISPLHLLSSSKNSNFTTAL--------HLPPKKSMASLSLSSTLSPNFLP 62
           +IV  NL+ ++ PL L  + K+ N+++ +         L P+   A  +LS T   +   
Sbjct: 16  VIVGTNLSFRLWPLKL-QAHKDDNYSSYVARNLSGHSSLEPEVRAAMAALSITAQKDLFA 75

Query: 63  QTPSSSSPKLRKSLPKTPFFKPISSPSLRAHSSLQLHPPTLNSLGLNDIGLGPIMGSAQQ 122
            +  S S      LP  P   P    SL+ H +  L P    +          ++ +A Q
Sbjct: 76  HSRKSMS------LPHAP---PPPLSSLKTHLAPSLKPRPAAAPAA-----AAVLSAAPQ 135

Query: 123 TPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSP 182
            P +AMRGAEAD MGLLLRERIVFLGSGIDDFVAD+IISQL+LLDAQDHTKDIRLF+NSP
Sbjct: 136 DPATAMRGAEADAMGLLLRERIVFLGSGIDDFVADAIISQLLLLDAQDHTKDIRLFVNSP 195

Query: 183 GGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLG 242
           GGSLSATMAI+DVV+LVRADVST+ALGI+ASTASIILG G KGKRLAMPN RIM+HQPLG
Sbjct: 196 GGSLSATMAIYDVVQLVRADVSTVALGISASTASIILGGGTKGKRLAMPNTRIMIHQPLG 255

Query: 243 GASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLID 302
           GASGQAIDVEIQA+E+MHNK+N+TRIIS FTGR FEQVEKDIDRDRYMSPIEAVEYG+ID
Sbjct: 256 GASGQAIDVEIQAKEVMHNKSNVTRIISSFTGRPFEQVEKDIDRDRYMSPIEAVEYGIID 315

Query: 303 GVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDDEIY 339
           GVID+DSIIPL PVP++V S  NY EISKDP+KFLTP+IPDDEIY
Sbjct: 316 GVIDRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEIY 345

[Close]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.500e-103
Identity = 210/303 (69.31%), Postives = 236/303 (77.89%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTP--FFKPISSPSLRAHSSLQLHPPTLN 97
           M +LSLSS+L P+ +    +SSS     S PK    + KP            +L  P L 
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPT-----------KLISPPLR 60

Query: 98  SLGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLM 157
           +   + +          QT ESA+RGAE+DVMGLLLRERIVFLGS IDDFVAD+I+SQL+
Sbjct: 61  TTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLL 120

Query: 158 LLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAK 217
           LLDA+D  KDI+LFINSPGGSLSATMAI+DVV+LVRADVST+ALGIAASTASIILGAG K
Sbjct: 121 LLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTK 180

Query: 218 GKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDI 277
           GKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNN+T II+  T RSFEQV KDI
Sbjct: 181 GKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDI 240

Query: 278 DRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDD 337
           DRDRYMSPIEAVEYGLIDGVID DSIIPLEPVPD+V    NY EISKDP KFLTPEIPDD
Sbjct: 241 DRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDD 292

Query: 338 EIY 339
           EIY
Sbjct: 301 EIY 292

[Close]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.100e-53
Identity = 114/227 (50.22%), Postives = 164/227 (72.25%), Query Frame = 1

		  
Query: 83  AHSSLQLHPPTLNSLGLNDIGLGP----IMGSAQQTP---ESAMRGAEA-DVMGLLLRER 142
           +H+SL +H   L + GL+     P    I GS    P   E + RG  A D+   LLRER
Sbjct: 4   SHASLPIHSRRL-AAGLDSRWQQPQIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRER 63

Query: 143 IVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADV 202
           IVFLG+G+DD VADSI++QL+ L+A+D  KDI+L+INSPGGS++A MAI+D ++ V  DV
Sbjct: 64  IVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDV 123

Query: 203 STLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 262
           +T+  G+AAS  + +L  GA+GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+
Sbjct: 124 ATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKS 183

Query: 263 NITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSI 302
            +  ++++ TG+  E++E D DRD +MSP EA  YGLID V+ + ++
Sbjct: 184 TLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRPTM 229

[Close]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.100e-53
Identity = 114/227 (50.22%), Postives = 164/227 (72.25%), Query Frame = 1

		  
Query: 83  AHSSLQLHPPTLNSLGLNDIGLGP----IMGSAQQTP---ESAMRGAEA-DVMGLLLRER 142
           +H+SL +H   L + GL+     P    I GS    P   E + RG  A D+   LLRER
Sbjct: 4   SHASLPIHSRRL-AAGLDSRWQQPQIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRER 63

Query: 143 IVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADV 202
           IVFLG+G+DD VADSI++QL+ L+A+D  KDI+L+INSPGGS++A MAI+D ++ V  DV
Sbjct: 64  IVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDV 123

Query: 203 STLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 262
           +T+  G+AAS  + +L  GA+GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+
Sbjct: 124 ATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKS 183

Query: 263 NITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSI 302
            +  ++++ TG+  E++E D DRD +MSP EA  YGLID V+ + ++
Sbjct: 184 TLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRPTM 229

[Close]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.600e-52
Identity = 101/192 (52.60%), Postives = 146/192 (76.04%), Query Frame = 1

		  
Query: 108 MGSAQQTPESAMRGAEA-DVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDI 167
           +G+     E + RG  A D+   LLRERI+FLGSGI+D V+DS+++QL+ L+A+D  KDI
Sbjct: 28  IGAVPTVIEQSGRGERAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDI 87

Query: 168 RLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARI 227
           +++INSPGGS++A MAI+D ++ +  DV T+  G+AAS  + +L  GAKGKRLA+PN+RI
Sbjct: 88  QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 147

Query: 228 MVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEA 287
           M+HQPLGGA GQA+++EIQA+EI+  K  +  +++E TG+  E++ +D +RD ++SP EA
Sbjct: 148 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 207

Query: 288 VEYGLIDGVIDK 299
           VEYGLID VI K
Sbjct: 208 VEYGLIDKVIKK 219

[Close]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.700e-52
Identity = 101/184 (54.89%), Postives = 139/184 (75.54%), Query Frame = 1

		  
Query: 116 ESAMRGAEA-DVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPG 175
           E   RG  A D+   LL++RI+FLGS IDD VA+ +I+Q++ L+A+D  KDI L+INSPG
Sbjct: 10  EQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG 69

Query: 176 GSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGG 235
           GS+SA MAIFD ++ +R DVST+ +G+AAS  + +L AGAKGKR A+PN+ IM+HQP+GG
Sbjct: 70  GSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGG 129

Query: 236 ASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDG 295
             GQA+D+EI A+ I+  ++N+ RI+SE TG+  EQ+ +D DRD +M+  EA EYGLID 
Sbjct: 130 TQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDE 189

Query: 296 VIDK 299
           VI K
Sbjct: 190 VITK 193

[Close]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 375.9 bits (964), Expect = 2.500e-104
Identity = 210/303 (69.31%), Postives = 236/303 (77.89%), Query Frame = 1

		  
Query: 38  MASLSLSSTLSPNFLPQTPSSSSPKLRKSLPKTP--FFKPISSPSLRAHSSLQLHPPTLN 97
           M +LSLSS+L P+ +    +SSS     S PK    + KP            +L  P L 
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPT-----------KLISPPLR 60

Query: 98  SLGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLM 157
           +   + +          QT ESA+RGAE+DVMGLLLRERIVFLGS IDDFVAD+I+SQL+
Sbjct: 61  TTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLL 120

Query: 158 LLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAK 217
           LLDA+D  KDI+LFINSPGGSLSATMAI+DVV+LVRADVST+ALGIAASTASIILGAG K
Sbjct: 121 LLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTK 180

Query: 218 GKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDI 277
           GKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNN+T II+  T RSFEQV KDI
Sbjct: 181 GKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDI 240

Query: 278 DRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPDKVISNFNYMEISKDPKKFLTPEIPDD 337
           DRDRYMSPIEAVEYGLIDGVID DSIIPLEPVPD+V    NY EISKDP KFLTPEIPDD
Sbjct: 241 DRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDD 292

Query: 338 EIY 339
           EIY
Sbjct: 301 EIY 292

[Close]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Match: AT1G66670.1 (CLP protease proteolytic subunit 3)

HSP 1 Score: 203.0 bits (515), Expect = 2.900e-52
Identity = 107/235 (45.53%), Postives = 152/235 (64.68%), Query Frame = 1

		  
Query: 75  PISSPSLRAHSSLQLHPPTLNSLGLNDIGLGPIMGSAQQTPESAMRGAEADVMGLLLRER 134
           P +S      SS+ L  P   +L  N       + S  Q+P       E D   +LLR+R
Sbjct: 35  PKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQR 94

Query: 135 IVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPGGSLSATMAIFDVVRLVRADV 194
           IVFLGS +DD  AD +ISQL+LLDA+D  +DI LFINSPGGS++A M I+D ++  +ADV
Sbjct: 95  IVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADV 154

Query: 195 STLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 254
           ST+ LG+AAS  + +L +G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K 
Sbjct: 155 STVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKI 214

Query: 255 NITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLEPVPD 310
            + +I S  TG+   ++E D DRD +++P EA EYGLID VID      + P+ D
Sbjct: 215 KLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGD 269

[Close]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Match: AT1G02560.1 (nuclear encoded CLP protease 5)

HSP 1 Score: 184.1 bits (466), Expect = 1.400e-46
Identity = 91/184 (49.46%), Postives = 132/184 (71.74%), Query Frame = 1

		  
Query: 113 QTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINS 172
           Q P   ++     ++  L + RI+  G  +DD +A+ I++QL+ LDA D TKDI +++NS
Sbjct: 102 QGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNS 161

Query: 173 PGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPL 232
           PGGS++A MAIFD +R +R DVST+ +G+AAS  + +L AG KGKR ++PN+RIM+HQPL
Sbjct: 162 PGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL 221

Query: 233 GGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLI 292
           GGA G   D++IQA E++H+K N+   ++  TG+S E++ +D DRD +MS  EA EYGLI
Sbjct: 222 GGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLI 281

Query: 293 DGVI 297
           DGVI
Sbjct: 282 DGVI 285

[Close]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 156.8 bits (395), Expect = 2.400e-38
Identity = 81/197 (41.12%), Postives = 134/197 (68.02%), Query Frame = 1

		  
Query: 116 ESAMRGAEA-DVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRLFINSPG 175
           E + RG  A D+   LL+ERI+ +   I+D  +  +++QL+ L++++ +K I +++NSPG
Sbjct: 38  EHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG 97

Query: 176 GSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMVHQPLGG 235
           G ++A +AI+D ++ +R+ +ST+ LG AAS AS++L AGAKG+R ++PNA +M+HQP GG
Sbjct: 98  GHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGG 157

Query: 236 ASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVEYGLIDG 295
            SGQA D+ I  ++I+   + +  +  + TG+  + V  ++DRD +M+P EA  +G+ID 
Sbjct: 158 YSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDE 217

Query: 296 VIDKDSIIPLEPVPDKV 312
           VID+    PLE V D V
Sbjct: 218 VIDER---PLELVKDAV 231

[Close]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Match: AT1G11750.2 (CLP protease proteolytic subunit 6)

HSP 1 Score: 150.2 bits (378), Expect = 2.300e-36
Identity = 75/191 (39.27%), Postives = 117/191 (61.26%), Query Frame = 1

		  
Query: 109 GSAQQTPESAMRGAEADVMGLLLRERIVFLGSGIDDFVADSIISQLMLLDAQDHTKDIRL 168
           G+    P     G   D+  +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +
Sbjct: 98  GNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILM 157

Query: 169 FINSPGGSLSATMAIFDVVRLVRADVSTLALGIAASTASIILGAGAKGKRLAMPNARIMV 228
           ++N PGGS  + +AI+D +  ++  V T+A G+AAS  +++L  G KG R AMPN R+M+
Sbjct: 158 YLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMI 217

Query: 229 HQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGRSFEQVEKDIDRDRYMSPIEAVE 288
           HQP  G  G   DV  Q  E +  +  I R+ + FTG+  E+V++  +RDR++S  EA+E
Sbjct: 218 HQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALE 277

Query: 289 YGLIDGVIDKD 300
           +GLIDG+++ +
Sbjct: 278 FGLIDGLLETE 288

The following BLAST results are available for this feature:

BLAST of Spo17491.1 vs. NCBI nr
BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
BLAST of Spo17491.1 vs. TAIR (Arabidopsis)

BLAST of Spo17491.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902231529\|gb\|KNA22303.1\|	4.9e-158	99.0	hypothetical protein SOVF_0354...	[more]
gi\|731332968\|ref\|XP_010677485.1\|	1.9e-138	86.6	PREDICTED: ATP-dependent Clp p...	[more]
gi\|743775407\|ref\|XP_010918084.1\|	6.7e-107	71.5	PREDICTED: ATP-dependent Clp p...	[more]
gi\|698504802\|ref\|XP_009797898.1\|	4.4e-106	71.6	PREDICTED: ATP-dependent Clp p...	[more]
gi\|747042353\|ref\|XP_011077978.1\|	2.2e-105	79.6	PREDICTED: ATP-dependent Clp p...	[more]

BLAST of Spo17491.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RS56_SPIOL	3.4e-158	99.0	ATP-dependent Clp protease pro...	[more]
A0A0J8CC95_BETVU	1.4e-138	86.6	ATP-dependent Clp protease pro...	[more]
A0A0D2R6I8_GOSRA	2.2e-104	72.5	ATP-dependent Clp protease pro...	[more]
A0A0B0PZ48_GOSAR	1.1e-103	71.1	ATP-dependent Clp protease pro...	[more]
A0A059CBQ6_EUCGR	1.4e-103	64.0	ATP-dependent Clp protease pro...	[more]

BLAST of Spo17491.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
CLPP4_ARATH	4.5e-103	69.3	ATP-dependent Clp protease pro...	[more]
CLPP3_SYNP6	1.1e-53	50.2	ATP-dependent Clp protease pro...	[more]
CLPP2_SYNE7	1.1e-53	50.2	ATP-dependent Clp protease pro...	[more]
CLPP4_PROM9	3.6e-52	52.6	ATP-dependent Clp protease pro...	[more]
CLPP_MOOTA	4.7e-52	54.8	ATP-dependent Clp protease pro...	[more]

BLAST of Spo17491.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G45390.1	2.5e-104	69.3	CLP protease P4	[more]
AT1G66670.1	2.9e-52	45.5	CLP protease proteolytic subun...	[more]
AT1G02560.1	1.4e-46	49.4	nuclear encoded CLP protease 5	[more]
AT5G23140.1	2.4e-38	41.1	nuclear-encoded CLP protease P...	[more]
AT1G11750.2	2.3e-36	39.2	CLP protease proteolytic subun...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 196..213 score: 4.6E-42coord: 217..236 score: 4.6E-42coord: 125..140 score: 4.6E-42coord: 165..185 score: 4.6E-42coord: 274..293 score: 4.6
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 110..299 score: 3
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 45..338 score: 7.8E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 124..298 score: 3.4
None	No IPR available	PANTHER	PTHR10381:SF24	SUBFAMILY NOT NAMED	coord: 45..338 score: 7.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0030243	cellulose metabolic process
biological_process	GO:0030091	protein repair
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0016049	cell growth
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0010431	seed maturation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0006396	RNA processing
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009631	cold acclimation
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0010342	endosperm cellularization
biological_process	GO:0000914	phragmoplast assembly
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0008152	metabolic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009620	response to fungus
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006437	tyrosyl-tRNA aminoacylation
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0042793	plastid transcription
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0009116	nucleoside metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006788	heme oxidation
biological_process	GO:0010024	phytochromobilin biosynthetic process
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0009113	purine nucleobase biosynthetic process
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0031425	chloroplast RNA processing
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0060003	copper ion export
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0010048	vernalization response
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0018874	benzoate metabolic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006223	uracil salvage
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0044206	UMP salvage
biological_process	GO:0046251	limonene catabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0032502	developmental process
biological_process	GO:0009657	plastid organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0006397	mRNA processing
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0000918	division septum site selection
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0051252	regulation of RNA metabolic process
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016020	membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0004831	tyrosine-tRNA ligase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0051750	delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0070191	methionine-R-sulfoxide reductase activity
molecular_function	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity
molecular_function	GO:0004008	copper-exporting ATPase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008693	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030899	calcium-dependent ATPase activity
molecular_function	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0003852	2-isopropylmalate synthase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0033743	peptide-methionine (R)-S-oxide reductase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0019136	deoxynucleoside kinase activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0004044	amidophosphoribosyltransferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004392	heme oxygenase (decyclizing) activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0004845	uracil phosphoribosyltransferase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004743	pyruvate kinase activity
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0042586	peptide deformylase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23767	0.87	Barchart \| Table
Spo22530	0.81	Barchart \| Table
Spo20387	0.80	Barchart \| Table
Spo19459	0.79	Barchart \| Table
Spo25783	0.78	Barchart \| Table
Spo07297	0.76	Barchart \| Table
Spo20952	0.76	Barchart \| Table
Spo00872	0.76	Barchart \| Table
Spo02221	0.76	Barchart \| Table
Spo26006	0.76	Barchart \| Table
Spo22182	0.76	Barchart \| Table
Spo05733	0.75	Barchart \| Table
Spo05833	0.75	Barchart \| Table
Spo25805	0.75	Barchart \| Table
Spo03195	0.75	Barchart \| Table
Spo09536	0.74	Barchart \| Table
Spo08824	0.74	Barchart \| Table
Spo24016	0.74	Barchart \| Table
Spo26911	0.74	Barchart \| Table
Spo06646	0.74	Barchart \| Table
Spo01305	0.73	Barchart \| Table
Spo23384	0.73	Barchart \| Table
Spo21020	0.73	Barchart \| Table
Spo25817	0.73	Barchart \| Table
Spo02278	0.73	Barchart \| Table
Spo21660	0.73	Barchart \| Table
Spo23363	0.73	Barchart \| Table
Spo17367	0.72	Barchart \| Table
Spo19474	0.72	Barchart \| Table
Spo23325	0.72	Barchart \| Table
Spo06362	0.72	Barchart \| Table
Spo02816	0.72	Barchart \| Table
Spo07915	0.72	Barchart \| Table
Spo15372	0.72	Barchart \| Table
Spo27163	0.72	Barchart \| Table
Spo08879	0.71	Barchart \| Table
Spo15015	0.71	Barchart \| Table
Spo15359	0.71	Barchart \| Table
Spo03773	0.71	Barchart \| Table
Spo04445	0.71	Barchart \| Table
Spo00405	0.71	Barchart \| Table
Spo27291	0.71	Barchart \| Table
Spo24690	0.71	Barchart \| Table
Spo07114	0.71	Barchart \| Table
Spo19197	0.71	Barchart \| Table
Spo10493	0.71	Barchart \| Table
Spo22715	0.71	Barchart \| Table
Spo01153	0.71	Barchart \| Table
Spo00400	0.70	Barchart \| Table
Spo22543	0.69	Barchart \| Table
Spo10916	0.69	Barchart \| Table
Spo06398	0.69	Barchart \| Table
Spo11238	0.69	Barchart \| Table
Spo16806	0.69	Barchart \| Table
Spo24153	0.69	Barchart \| Table
Spo04908	0.69	Barchart \| Table
Spo26672	0.69	Barchart \| Table
Spo26727	0.69	Barchart \| Table
Spo18828	0.69	Barchart \| Table
Spo13691	0.69	Barchart \| Table
Spo13835	0.69	Barchart \| Table
Spo18908	0.69	Barchart \| Table
Spo20027	0.69	Barchart \| Table
Spo22999	0.69	Barchart \| Table
Spo23249	0.69	Barchart \| Table
Spo17161	0.69	Barchart \| Table
Spo14403	0.69	Barchart \| Table
Spo03066	0.68	Barchart \| Table
Spo04653	0.68	Barchart \| Table
Spo04682	0.68	Barchart \| Table
Spo07306	0.68	Barchart \| Table
Spo09458	0.68	Barchart \| Table
Spo10473	0.68	Barchart \| Table
Spo11509	0.68	Barchart \| Table
Spo12302	0.68	Barchart \| Table
Spo12875	0.68	Barchart \| Table
Spo17291	0.68	Barchart \| Table
Spo19218	0.68	Barchart \| Table
Spo19288	0.68	Barchart \| Table
Spo19341	0.68	Barchart \| Table
Spo21501	0.68	Barchart \| Table
Spo21808	0.68	Barchart \| Table
Spo24081	0.68	Barchart \| Table
Spo04868	0.67	Barchart \| Table
Spo14353	0.67	Barchart \| Table
Spo05969	0.67	Barchart \| Table
Spo07490	0.67	Barchart \| Table
Spo07610	0.67	Barchart \| Table
Spo02648	0.67	Barchart \| Table
Spo11951	0.67	Barchart \| Table
Spo14779	0.67	Barchart \| Table
Spo26857	0.67	Barchart \| Table
Spo11739	0.67	Barchart \| Table
Spo04374	0.67	Barchart \| Table
Spo23504	0.66	Barchart \| Table
Spo12228	0.66	Barchart \| Table
Spo00568	0.66	Barchart \| Table
Spo22006	0.66	Barchart \| Table
Spo10624	0.66	Barchart \| Table
Spo14578	0.66	Barchart \| Table
Spo06061	0.66	Barchart \| Table
Spo27346	0.66	Barchart \| Table
Spo05680	0.66	Barchart \| Table
Spo24679	0.66	Barchart \| Table
Spo04086	0.66	Barchart \| Table
Spo18111	0.66	Barchart \| Table
Spo14857	0.66	Barchart \| Table
Spo02513	0.66	Barchart \| Table
Spo04377	0.65	Barchart \| Table
Spo10961	0.65	Barchart \| Table
Spo09769	0.65	Barchart \| Table
Spo06949	0.65	Barchart \| Table
Spo14256	0.65	Barchart \| Table
Spo03027	0.65	Barchart \| Table
Spo09777	0.65	Barchart \| Table
Spo00854	0.65	Barchart \| Table
Spo13029	0.65	Barchart \| Table
Spo01101	0.65	Barchart \| Table
Spo10705	0.65	Barchart \| Table