Spo17569 (gene)

Overview
NameSpo17569
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionChaperone DnaJ domain-containing protein
Locationchr5 : 132703 .. 133522 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAAAAAGAAATGGGTGGTGTGGGCGAAGGGAAGGTGGCAATTCTGGTTGAAGACTTGAAGAAAGTGTTGTTCTGGAATTTCCCAATGAAATCGAGTGCTTTGTAAATGAAGAGCGGAGAAGCAAGGCTTTTGCTGGGATTTCCTCCCAACTCTCGTCCTACCCCTTCTCAGGTGAAACTCCATCCTTAACCTAATTTGTAATCACTCCTTTTTTATTTCTTGTTTCTAATGCAAGAATTGTTTATCATTCATATCATCCAATTCTGTTTATATGATTCAATCATTTGAATTTGTTTTTTTATTTTTATTCAATTCTGTGAATGGATTGATTATTTGAATCTAAATTGGCAACTGTTATATCCATTGGTTTATATGATTGTCAATTAGGCGAATTGGTGATGGATCATCTATGTTACTTGGACGGACTCAGGTACTAATGTCGGAAACAGGTGAAAATTTCGATGATTTTAGACCAAAATTAAAGTGTCAAGTCCGAGTAACATAGTGGATCATGCAACTGTATTTGTGTTAAGTGTTAACCAATGTTAATGTTGTAAGACCACAATTGCAGGTGAAAGCCGCCTATAAAAGGAAGGTTTGGGATGTTCATCCTGATCTTTTTCCAGTTGATAAAGCTAGTTATGCCGAATCACAATTCAAAATGGTAACAACTAACAATCCATTTGTTAGCAGTTACTTGATTCTTATTCTTATTTTATTTTTGCAATCTTACTTTGTTAATTTTCACTCTTTTGCAGATTTCTGAAGCGTACAAGTGCCTCTTGACTGCAGGTACTCAGAACCTTCGTTTCTAG

mRNA sequence

AAAAAGAAAAAGAAATGGGTGGTGTGGGCGAAGGGAAGGTGGCAATTCTGGTTGAAGACTTGAAGAAAGTGTTGTTCTGGAATTTCCCAATGAAATCGAGTGCTTTGTAAATGAAGAGCGGAGAAGCAAGGCTTTTGCTGGGATTTCCTCCCAACTCTCGTCCTACCCCTTCTCAGGTGAAAGCCGCCTATAAAAGGAAGGTTTGGGATGTTCATCCTGATCTTTTTCCAGTTGATAAAGCTAGTTATGCCGAATCACAATTCAAAATGATTTCTGAAGCGTACAAGTGCCTCTTGACTGCAGGTACTCAGAACCTTCGTTTCTAG

Coding sequence (CDS)

ATGAAGAGCGGAGAAGCAAGGCTTTTGCTGGGATTTCCTCCCAACTCTCGTCCTACCCCTTCTCAGGTGAAAGCCGCCTATAAAAGGAAGGTTTGGGATGTTCATCCTGATCTTTTTCCAGTTGATAAAGCTAGTTATGCCGAATCACAATTCAAAATGATTTCTGAAGCGTACAAGTGCCTCTTGACTGCAGGTACTCAGAACCTTCGTTTCTAG

Protein sequence

MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKCLLTAGTQNLRF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17569.1Spo17569.1mRNA


Homology
[Close]
BLAST of Spo17569.1 vs. NCBI nr
Match: gi|902223805|gb|KNA19578.1| (hypothetical protein SOVF_059780 isoform B [Spinacia oleracea])

HSP 1 Score: 137.5 bits (345), Expect = 9.100e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC
Sbjct: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60

Query: 61 LLTAG 66
          LLTAG
Sbjct: 61 LLTAG 65
[Close]
BLAST of Spo17569.1 vs. NCBI nr
Match: gi|870858545|gb|KMT10054.1| (hypothetical protein BVRB_5g122640 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-24
Identity = 57/69 (82.61%), Postives = 58/69 (84.06%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          MKSGEARLLLGFPPNSRPT SQVK AY+RKVWDVHPD FP DK SYAESQFKMISEAY C
Sbjct: 1  MKSGEARLLLGFPPNSRPTYSQVKTAYRRKVWDVHPDRFPADKRSYAESQFKMISEAYNC 60

Query: 61 LLTAGTQNL 70
          LL  G   L
Sbjct: 61 LLPVGLGGL 69
[Close]
BLAST of Spo17569.1 vs. NCBI nr
Match: gi|731336904|ref|XP_010679507.1| (PREDICTED: uncharacterized protein LOC104894862 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 119.4 bits (298), Expect = 2.600e-24
Identity = 56/65 (86.15%), Postives = 57/65 (87.69%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          MKSGEARLLLGFPPNSRPT SQVK AY+RKVWDVHPD FP DK SYAESQFKMISEAY C
Sbjct: 1  MKSGEARLLLGFPPNSRPTYSQVKTAYRRKVWDVHPDRFPADKRSYAESQFKMISEAYNC 60

Query: 61 LLTAG 66
          LL  G
Sbjct: 61 LLPGG 65
[Close]
BLAST of Spo17569.1 vs. NCBI nr
Match: gi|1009148184|ref|XP_015891801.1| (PREDICTED: uncharacterized protein LOC107426202 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 102.8 bits (255), Expect = 2.500e-19
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+  EARL+LGFPPN RPTP+QVKAAYKRKVW+ HPDLFP  +  +AES FK+ISEAY C
Sbjct: 1  MRGDEARLVLGFPPNYRPTPAQVKAAYKRKVWESHPDLFPSHQKPHAESNFKLISEAYTC 60

Query: 61 LLTAG 66
          LL+ G
Sbjct: 61 LLSGG 65
[Close]
BLAST of Spo17569.1 vs. NCBI nr
Match: gi|1009148182|ref|XP_015891800.1| (PREDICTED: uncharacterized protein LOC107426202 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 102.8 bits (255), Expect = 2.500e-19
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+  EARL+LGFPPN RPTP+QVKAAYKRKVW+ HPDLFP  +  +AES FK+ISEAY C
Sbjct: 1  MRGDEARLVLGFPPNYRPTPAQVKAAYKRKVWESHPDLFPSHQKPHAESNFKLISEAYTC 60

Query: 61 LLTAG 66
          LL+ G
Sbjct: 61 LLSGG 65
[Close]
BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJB7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059780 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.300e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC
Sbjct: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60

Query: 61 LLTAG 66
          LLTAG
Sbjct: 61 LLTAG 65
[Close]
BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCY0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g122640 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.400e-24
Identity = 57/69 (82.61%), Postives = 58/69 (84.06%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          MKSGEARLLLGFPPNSRPT SQVK AY+RKVWDVHPD FP DK SYAESQFKMISEAY C
Sbjct: 1  MKSGEARLLLGFPPNSRPTYSQVKTAYRRKVWDVHPDRFPADKRSYAESQFKMISEAYNC 60

Query: 61 LLTAGTQNL 70
          LL  G   L
Sbjct: 61 LLPVGLGGL 69
[Close]
BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Match: A0A058ZYB7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00578 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.800e-19
Identity = 45/63 (71.43%), Postives = 56/63 (88.89%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+S EAR+LLGFPPNS PTPSQVKAA+K+KVW+ HPDLFP+++   AES+FK+ISEAY C
Sbjct: 1  MRSDEARVLLGFPPNSCPTPSQVKAAFKKKVWESHPDLFPINEKPTAESKFKLISEAYNC 60

Query: 61 LLT 64
          LL+
Sbjct: 61 LLS 63
[Close]
BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Match: A0A058ZZC1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00578 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.800e-19
Identity = 45/63 (71.43%), Postives = 56/63 (88.89%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+S EAR+LLGFPPNS PTPSQVKAA+K+KVW+ HPDLFP+++   AES+FK+ISEAY C
Sbjct: 1  MRSDEARVLLGFPPNSCPTPSQVKAAFKKKVWESHPDLFPINEKPTAESKFKLISEAYNC 60

Query: 61 LLT 64
          LL+
Sbjct: 61 LLS 63
[Close]
BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Match: A0A0B0Q2C4_GOSAR (Protein CAJ1 OS=Gossypium arboreum GN=F383_11156 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.100e-18
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+  EARLLLGFPPNSRPTPSQ+KAAY++KVW+ HPDLFPV +   AES+FK+I+EAY C
Sbjct: 1  MQGDEARLLLGFPPNSRPTPSQIKAAYRKKVWESHPDLFPVHEKRSAESKFKLIAEAYTC 60

Query: 61 L 62
          L
Sbjct: 61 L 61
[Close]
BLAST of Spo17569.1 vs. TAIR (Arabidopsis)
Match: AT3G62190.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 1.400e-20
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 1 

		  

Query: 1  MKSGEARLLLGFPPNSRPTPSQVKAAYKRKVWDVHPDLFPVDKASYAESQFKMISEAYKC 60
          M+  EA++LLGFPPNSRP PSQVKAAY++KVW+ HPDLFP D+   AES+FK ISEAY C
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61 L 62
          L
Sbjct: 61 L 61
The following BLAST results are available for this feature:
BLAST of Spo17569.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902223805|gb|KNA19578.1|9.1e-30100.hypothetical protein SOVF_0597... [more]
gi|870858545|gb|KMT10054.1|2.0e-2482.6hypothetical protein BVRB_5g12... [more]
gi|731336904|ref|XP_010679507.1|2.6e-2486.1PREDICTED: uncharacterized pro... [more]
gi|1009148184|ref|XP_015891801.1|2.5e-1970.7PREDICTED: uncharacterized pro... [more]
gi|1009148182|ref|XP_015891800.1|2.5e-1970.7PREDICTED: uncharacterized pro... [more]
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BLAST of Spo17569.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RJB7_SPIOL6.3e-30100.Uncharacterized protein OS=Spi... [more]
A0A0J8CCY0_BETVU1.4e-2482.6Uncharacterized protein OS=Bet... [more]
A0A058ZYB7_EUCGR3.8e-1971.4Uncharacterized protein OS=Euc... [more]
A0A058ZZC1_EUCGR3.8e-1971.4Uncharacterized protein OS=Euc... [more]
A0A0B0Q2C4_GOSAR1.1e-1872.1Protein CAJ1 OS=Gossypium arbo... [more]
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BLAST of Spo17569.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17569.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G62190.11.4e-2070.4Chaperone DnaJ-domain superfam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainGENE3D1.10.287.110coord: 11..61
score: 3.1
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 10..62
score: 1.
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 5..71
score: 9
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 9..63
score: 1.31

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006457 protein folding
cellular_component GO:0005737 cytoplasm
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo175710.68Barchart | Table