Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGCAGGTGGAGGTCCTAGAGGAAGTTCAAGCTCAGGTAAGGCTATCTGAGCATGTTTTAGATTTTAATACGTACATGTCACATTTATTCATCCCGGCATTACTGAAACTTTGATAGTTACTTACACACGGGTCGTGCGGACTGGGGTACCAAGGGTGCATGGAGGAAGACATCATCTTTTAGTTGGCCTACCCTTCCTTCTGGTTTTGTTTGGAACAGTTGGACTTGGAGGTATAAGTGTTACCAGGTACTAAACATAAGCCTTGACGATGTAGAATACTGAAACTACTTTTCTTTTAGCTCAATGTTTACTTCTGATATGGTTACTTTGCTTCTCAGGGCTTATAGAAAGGAAAAAGAAGCATACCCATCTCATAATCCTTTTCTCCCTTGATCCAATTACTGGACAAAACAACTTCTTAGAACAGCATAGACTGCTCAGAAATGGAATAGCACTTTTGACCAAATACTATTGCTCATCATTGTCCATGTTTTAGTAATATTGAAATCAGATTTTTGACATTGCCATGTGGTAAATAATGTAATACTTCATACTACCTATTACAATTGTTTCATTCCTGTTCTGATCTCCTGATATGAGGCTAACCATGATTGAAATCGGTTCTTAAGATTTCAACCGTTGTTAGTAAGATATACTTGTACTTCGTATGACGCACGTGATTAACTGAAAAGCATAACACGCGTGTTGTTAAAAATCACTGTTGTACGAGTACAGCAACTTATAGATGAACACCACCTTTATGTCATGGATCGCCTCACACACCATCGCATGCAGCAACCAGTAACATGCACGGTATTTAGCAACGCAAGGCATCGCAGTGCACCGCCAAGGATGGCTGCAAAGGCGTTGGGCATCATCGGGCTACATGGTGTTCCATCGGAAATTGAGTCGTGTGGGTCGTCAAGGCAACGGAGTGCATCGGGTGCACGGTAGTGAACGTTGGCACTATACGCATAGGCAGCATGATAGGCATGAGGGCAGCGGCCATGACTAACACC ATGGAATCTGCAGGTGGAGGTCCTAGAGGAAGTTCAAGCTCAGTTACTTACACACGGGTCGTGCGGACTGGGGTACCAAGGGTGCATGGAGGAAGACATCATCTTTTAGTTGGCCTACCCTTCCTTCTGGTTTTGTTTGGAACAGTTGGACTTGGAGGTATAAGTGTTACCAGGGCTTATAGAAAGGAAAAAGAAGCATACCCATCTCATAATCCTTTTCTCCCTTGATCCAATTACTGGACAAAACAACTTCTTAGAACAGCATAGACTGCTCAGAAATGGAATAGCACTTTTGACCAAATACTATTGCTCATCATTGTCCATGTTTTAGTAATATTGAAATCAGATTTTTGACATTGCCATGTGGTAAATAATGTAATACTTCATACTACCTATTACAATTGTTTCATTCCTGTTCTGATCTCCTGATATGAGGCTAACCATGATTGAAATCGGTTCTTAAGATTTCAACCGTTGTTAGTAAGATATACTTGTACTTCGTATGACGCACGTGATTAACTGAAAAGCATAACACGCGTGTTGTTAAAAATCACTGTTGTACGAGTACAGCAACTTATAGATGAACACCACCTTTATGTCATGGATCGCCTCACACACCATCGCATGCAGCAACCAGTAACATGCACGGTATTTAGCAACGCAAGGCATCGCAGTGCACCGCCAAGGATGGCTGCAAAGGCGTTGGGCATCATCGGGCTACATGGTGTTCCATCGGAAATTGAGTCGTGTGGGTCGTCAAGGCAACGGAGTGCATCGGGTGCACGGTAGTGAACGTTGGCACTATACGCATAGGCAGCATGATAGGCATGAGGGCAGCGGCCATGACTAACACC ATGGAATCTGCAGGTGGAGGTCCTAGAGGAAGTTCAAGCTCAGTTACTTACACACGGGTCGTGCGGACTGGGGTACCAAGGGTGCATGGAGGAAGACATCATCTTTTAGTTGGCCTACCCTTCCTTCTGGTTTTGTTTGGAACAGTTGGACTTGGAGGTATAAGTGTTACCAGGGCTTATAGAAAGGAAAAAGAAGCATACCCATCTCATAATCCTTTTCTCCCTTGA MESAGGGPRGSSSSVTYTRVVRTGVPRVHGGRHHLLVGLPFLLVLFGTVGLGGISVTRAYRKEKEAYPSHNPFLP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17571.1 vs. NCBI nr
Match: gi|902223804|gb|KNA19577.1| (hypothetical protein SOVF_059780 isoform A [Spinacia oleracea]) HSP 1 Score: 155.6 bits (392), Expect = 3.400e-35 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of Spo17571.1 vs. NCBI nr
Match: gi|902223805|gb|KNA19578.1| (hypothetical protein SOVF_059780 isoform B [Spinacia oleracea]) HSP 1 Score: 150.2 bits (378), Expect = 1.400e-33 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1
BLAST of Spo17571.1 vs. NCBI nr
Match: gi|731336904|ref|XP_010679507.1| (PREDICTED: uncharacterized protein LOC104894862 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 110.5 bits (275), Expect = 1.300e-21 Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 1
BLAST of Spo17571.1 vs. NCBI nr
Match: gi|823124431|ref|XP_012480121.1| (PREDICTED: uncharacterized protein LOC105795160 isoform X1 [Gossypium raimondii]) HSP 1 Score: 104.0 bits (258), Expect = 1.200e-19 Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 1
BLAST of Spo17571.1 vs. NCBI nr
Match: gi|223545678|gb|EEF47182.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 102.8 bits (255), Expect = 2.600e-19 Identity = 45/71 (63.38%), Postives = 59/71 (83.10%), Query Frame = 1
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RL55_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059780 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.400e-35 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJB7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059780 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 9.900e-34 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Match: B9RN59_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1343900 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.800e-19 Identity = 45/71 (63.38%), Postives = 59/71 (83.10%), Query Frame = 1
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PZ68_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G147500 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.500e-18 Identity = 45/67 (67.16%), Postives = 55/67 (82.09%), Query Frame = 1
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PYU6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11156 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.000e-18 Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of Spo17571.1 vs. TAIR (Arabidopsis)
Match: AT3G62190.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 77.4 bits (189), Expect = 4.100e-15 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17571.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17571.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17571.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17571.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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