Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACAATTGCCATTAGCACACCTTCAAGCTCAATCCCAGGTCCCCGAATTTGTTTGAGTGGCGACGCCCAATTGATGATCTTCAGGGCCACATCATATTCAAATTCAAAATCATATTCAAAATTGAATTGTAAATTGAGCAGAAAATGTCTGAGATCAAAACCACCGAATCAACTCCTCTTCAAAATCCCAATCAACACTTCCTCAAAGTCCTCTTCAAAACGCCTTTTCCGGCCTGTCATGGAGTTACAAGATTGCACGTTAGTCACTCTCCCACTCTCCTTTATTAATTATTGCTTTTGATTTTTGATAAATTAAGCTATAGTTATGTAATTGTTGGTCTAGAAAGTAGAAACTGATTTGTGCGTTATTTATCTAGTATTTCTGATTGATTATGTAAGGAAGTAGTATGATTTAGCTATCTTATGCTCAAGATTTGGTTACCCAACCTGTTAATTGCTGTAATTGTGATAAGCAAGTTTGCCTTAATTTATGGTTAATTCTAGCTTGCTTGGTCTTTCTGTAATGCTATCACTTGCTGCTGCTGGTGCTCATCTACAAATGGATCATTTTCGTTTATCTATTAGATTTTCGATTAGACGTGTGCCGTCTGCTAAATGATTACTTACTTGTATAGGGTTCAATTTTGTTTATTGTGGAGTATAAAACTTCCTCCTTTTGATCCATAACTATGGTAATCTTTGGACTTTTACACTATTCGTACACTCCCTTTATTGTGAGTATGATCAAATGCAGGGTCAAGATAGGACGGAGAAAGTAGTTAATAAGACATCCTAGTATAGATTCTTTGGTTGCTTCTCACATGTCCATCTCTAAAAAGAATGAGTATGATAAAATGCAGGGTCAAGATGGAAGTTGATGTGCCTGTTTCTGTAGCATACGATTGTTACTTAGATCGTGAAGCCATACCTAAGTGGATGCCTTTCATTTCAACAGTTAAGGTACATTCTTCTTCATTTCTTTTCTCTATTGATGTTTTATTAACCTACAGATTCTCTGGGGTTGGCATTCTTGTAATCAATTATTGAACTGAATTGAGGCTATTCTATTTTGTAATTTGTACAAACAAGATGATGTTTTTTCTTCTATGCATGGTAATAAGCTGTTGGCTTCTCCCTTGCTCTTTACTAGACTTCTGCATATGTTAAATTAGAATGTAGTATCAATATTTCATAGTAGTTTGTTCCTCTAGAGCAAGCGATAAAGGACCTGCTTGTATCCGAGCTAGATGAAAAGCATTATATGAGCTATGAAAAACACGCTTGTTCAAACTGTATTGAACTATTGCCTTTCCTGTTTGTGGTCTCCACGAAATGATGCCATGCTTTGAGTAATTTGCTTATGCTTTGGGAGTTTGGGGTTATGTAAAACTGTGGTTTTTACTATATTGTGATGTTAGTGACCTATACTAGTACACTGTAGTAACTTGCCGGATTTACAGTCCTTAAAAGCGCCAAGCTTGTTGGCGAACCTGCAAATCCAATTTATTACGGTTTAGGGGTGTTTTATTTTGATACAATGACACTGAACAATTTAGCAGATCAAAGATTTTAATGGTAGCCAATAACCATGTACCCCGTATATAGCTAATCCAATGATTCTGACATGAGGTCTTGAAGACTAGACCAACGAAATATTGCCATCTCAAGTTCTGATGAATAATTGAATTATCTGTGTATCGCAAATGACTCTGATCCTAGGACAGGGGCTCTGATGCTCTATGATGGAAAACTTATTTGAAAAATTATACATTATGCAAAATGGTCACAGTAACATTGTGGTAGCATTTATTATCTTATTAAAAAACTCTTCTGCTAGATTTCTATGGATGATTTTTCTTTGATCATCAATTTCGCGTTCCTCCTTAACACACTGTTTCCTTTCCCATTGCTTAATAATGTGTAAATTTTTTCATAAACCAGGTCTTGGAAGATAAGCCTGATCAATCAAGATGGACGCTAAAATATAAAGCATTTGGCCGTGATATTGAGTTCTCTTGGCTTGCTCGAAATCTACAGGTACCATCATTATTTGGTTTTTATATTTTTATCATTCTCTGATCACTTGAAAGTTTTCTCTTGGATATGGTTTAATTTTGTACTATTTCTGGCGTCACTGCAGCCTATCCCAAACCAGAAAATTCATTGGAGATCTCTAGAAGGTCTTCCAAACAGGTGAGAATTATATGCTGAAGCTGGTACTTTCCCTGCTTCGTCTATGTGTAGTTCTTTGGAATTCTTCATTTCACTTTTACCCATGTTTGCGATCCTCAAAAGCAAGCTCTATAATCTTGTTGTACATGAAATTCTGTGGGATTCTAAAGGACCAGAAGTTATATAGTCAATTGACTTAATATCACTGTTGCTTTGCTTCGCCTTTTTTTTTTCCTTCGGAAATAAATGGGCACTAAAGCTGTTCTATTCACATTGGCATACTTTCTGCCAATGGTGCTCTAGACTTCTAAATTTTATCCTATAGGCGTATGAATTGGTTGTTGATGAAAAAAAGTTCTTCCTTTGCAGTGGTGCTGTTCGATTTTACCCAAGAGGTACTTCATCATGTCTTGTAGAAGTAAGGAGCCTTTCTCCCTGATGTATCCAGTTTAATTTTGTAATTTCTTCTAAACTTGAATTACTTTTAAATATTTTTTATGATTCATGTGTCTCCAGTCCACTGCCTCCATAGAAAACCCCTAATTAAAATACGTCTTGAAATGCTTGGGTCCTGTGCTTCATAAATATATGTACATATTAGCTGAATAATACTTAGTGGCTCGTTATCTATTTTTAGTTCTATTACTACTCCGTTTGTGTTACAGTGAGGTTGAGTTTACAAAAAGTTGGTGTCCTCATGCTCATTGATTGCATATTTCTGAATTCCTTTGATAAAAGAAGGCATATTATTGCTGACTAATCTATCTGGCTCTCTCCTTTTCTAAATTTTCTTCTCAGCTGACAGTGTCATATGAAGTTCCTCAACTTCTAGCGCCTGTAGCATCGGTAAGCATCTTTCCTTTCAAATAGGTGTTTCATAATACTCCCTCCGTCCCGGAATACTTGACCTGTTTTCCTTATCGGGCCGTCCCTTAATACTTGACTTGTTTCTAAAAATGGAAATATTCTAACAATATTATATTATTTCTCATTCCACCCCTATTGACCCACCTAACCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCATACTCTCCCCCAACCCCACCACTTAACCCACCTCCCACTAACTACCTTAAAATAATACCCCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTCCCTTAAACTCTGTGCCGGTCAAACCGGGTCGAGTATTCCGGGACGGAGGGAGTATTCTTTAAAAAGAAATCAGATAAAAAAATAAAATAAAAGCTATACTGCTGAGGTTCTGAATTCTCGTTACTGTGGGTTTATTTCTTTGAAGCTATAAATTTCTGCCTGTGTCTTTGTGTTTCTGCCTTCAAGATTGACATGCAACTCAGCTGATTGTGAATACTTGCAGGCACTTCAACCTTTTCTTCAAAGCCTGCTTCTGCGAGGTTTGGAAAGGTTTTCAAAATATGCGAAAAGCTGTCAACCAGAGTCAACCAACTAATCCCTGTGTGAGTCACTCAACATTGAATCCATTTGTATAAGCCATCCTTTTGATAAGAATACCTGCTTTCACAAATTGTGACTGATCATGCTTAATTCTAACAGGAAGATCATATTTTTAATTCTAACAGGAAGATCATTTTTCAGTCCACAATCACCTGGGTTGTTACTGGTTGTTGCAGCTTTATTGTAAAGTGGTTCTTCAGGAGCTGCAACCAACAAGAAGCGAAACCTTGGTGTGTAAATGGTTGTGAGTGGCGTCTTCTAATGGATGGGATTGTATGTAACCTATTTGTAATTAAGTTGGTAAATTGAACATTGGTCCCAATACCCCTGCATTTTTTGTTCTTATTTGCTCTCTTGATCTTGGTAAATTCAATTGGCCGATGTGTTTTTAAGGCGGTAATTTCAGTAAGTACTTAGTACTCATACTATTAATTTCCTCTTTCTTGGATCTCTCTACAAGATAAATATTTGTGATGTTTGGAAGCAAAACCATAATACCAAAACAATGCCAATGAAGTTTTTTGTTTTTTGATTCAAAATGAAGCTTTATTCGTTGCTCTGCAACAATTATGTAATAGAATTCGTGTTAATAATATGTCAGTAGCGTTATGCAACTTAATTAAGTGCACTACTTTGAAGTTTCATCTCCTCAAAACCGAGGAAAATCCAACCTGAAAAGGCTGACATCTGATAAACAAATGAGAAAAACATAGAACATTAGATCTGAACACACAAATTTAAGGACTGATTACTGCAAGAATGCGGCAAATTTTATACACCATCCATCTTCAACCCCCTTCCAATTATATTCACATCAACCTTTCCCACCAACAATAACCC ATGTCTACAATTGCCATTAGCACACCTTCAAGCTCAATCCCAGGTCCCCGAATTTGTTTGAGTGGCGACGCCCAATTGATGATCTTCAGGGCCACATCATATTCAAATTCAAAATCATATTCAAAATTGAATTGTAAATTGAGCAGAAAATGTCTGAGATCAAAACCACCGAATCAACTCCTCTTCAAAATCCCAATCAACACTTCCTCAAAGTCCTCTTCAAAACGCCTTTTCCGGCCTGTCATGGAGTTACAAGATTGCACGGTCAAGATGGAAGTTGATGTGCCTGTTTCTGTAGCATACGATTGTTACTTAGATCGTGAAGCCATACCTAAGTGGATGCCTTTCATTTCAACAGTTAAGGTCTTGGAAGATAAGCCTGATCAATCAAGATGGACGCTAAAATATAAAGCATTTGGCCGTGATATTGAGTTCTCTTGGCTTGCTCGAAATCTACAGCCTATCCCAAACCAGAAAATTCATTGGAGATCTCTAGAAGGTCTTCCAAACAGTGGTGCTGTTCGATTTTACCCAAGAGGTACTTCATCATGTCTTGTAGAACTGACAGTGTCATATGAAGTTCCTCAACTTCTAGCGCCTGTAGCATCGGCACTTCAACCTTTTCTTCAAAGCCTGCTTCTGCGAGGTTTGGAAAGGTTTTCAAAATATGCGAAAAGCTGTCAACCAGAGTCAACCAACTAATCCCTGTGAAGATCATATTTTTAATTCTAACAGGAAGATCATTTTTCAGTCCACAATCACCTGGGTTGTTACTGGTTGTTGCAGCTTTATTGTAAAGTGGTTCTTCAGGAGCTGCAACCAACAAGAAGCGAAACCTTGGTGTGTAAATGGTTGTGAGTGGCGTCTTCTAATGGATGGGATTGTATGTAACCTATTTGTAATTAAGTTGGTAAATTGAACATTGGTCCCAATACCCCTGCATTTTTTGTTCTTATTTGCTCTCTTGATCTTGGTAAATTCAATTGGCCGATGTGTTTTTAAGGCGGTAATTTCAGTAAGTACTTAGTACTCATACTATTAATTTCCTCTTTCTTGGATCTCTCTACAAGATAAATATTTGTGATGTTTGGAAGCAAAACCATAATACCAAAACAATGCCAATGAAGTTTTTTGTTTTTTGATTCAAAATGAAGCTTTATTCGTTGCTCTGCAACAATTATGTAATAGAATTCGTGTTAATAATATGTCAGTAGCGTTATGCAACTTAATTAAGTGCACTACTTTGAAGTTTCATCTCCTCAAAACCGAGGAAAATCCAACCTGAAAAGGCTGACATCTGATAAACAAATGAGAAAAACATAGAACATTAGATCTGAACACACAAATTTAAGGACTGATTACTGCAAGAATGCGGCAAATTTTATACACCATCCATCTTCAACCCCCTTCCAATTATATTCACATCAACCTTTCCCACCAACAATAACCC ATGTCTACAATTGCCATTAGCACACCTTCAAGCTCAATCCCAGGTCCCCGAATTTGTTTGAGTGGCGACGCCCAATTGATGATCTTCAGGGCCACATCATATTCAAATTCAAAATCATATTCAAAATTGAATTGTAAATTGAGCAGAAAATGTCTGAGATCAAAACCACCGAATCAACTCCTCTTCAAAATCCCAATCAACACTTCCTCAAAGTCCTCTTCAAAACGCCTTTTCCGGCCTGTCATGGAGTTACAAGATTGCACGGTCAAGATGGAAGTTGATGTGCCTGTTTCTGTAGCATACGATTGTTACTTAGATCGTGAAGCCATACCTAAGTGGATGCCTTTCATTTCAACAGTTAAGGTCTTGGAAGATAAGCCTGATCAATCAAGATGGACGCTAAAATATAAAGCATTTGGCCGTGATATTGAGTTCTCTTGGCTTGCTCGAAATCTACAGCCTATCCCAAACCAGAAAATTCATTGGAGATCTCTAGAAGGTCTTCCAAACAGTGGTGCTGTTCGATTTTACCCAAGAGGTACTTCATCATGTCTTGTAGAACTGACAGTGTCATATGAAGTTCCTCAACTTCTAGCGCCTGTAGCATCGGCACTTCAACCTTTTCTTCAAAGCCTGCTTCTGCGAGGTTTGGAAAGGTTTTCAAAATATGCGAAAAGCTGTCAACCAGAGTCAACCAACTAA MSTIAISTPSSSIPGPRICLSGDAQLMIFRATSYSNSKSYSKLNCKLSRKCLRSKPPNQLLFKIPINTSSKSSSKRLFRPVMELQDCTVKMEVDVPVSVAYDCYLDREAIPKWMPFISTVKVLEDKPDQSRWTLKYKAFGRDIEFSWLARNLQPIPNQKIHWRSLEGLPNSGAVRFYPRGTSSCLVELTVSYEVPQLLAPVASALQPFLQSLLLRGLERFSKYAKSCQPESTN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17577.1 vs. NCBI nr
Match: gi|902223825|gb|KNA19598.1| (hypothetical protein SOVF_059950 [Spinacia oleracea]) HSP 1 Score: 469.5 bits (1207), Expect = 3.300e-129 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo17577.1 vs. NCBI nr
Match: gi|731336783|ref|XP_010679443.1| (PREDICTED: uncharacterized protein LOC104894811 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 319.3 bits (817), Expect = 5.500e-84 Identity = 168/245 (68.57%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Spo17577.1 vs. NCBI nr
Match: gi|596113597|ref|XP_007221562.1| (hypothetical protein PRUPE_ppa011210mg [Prunus persica]) HSP 1 Score: 290.0 bits (741), Expect = 3.600e-75 Identity = 151/237 (63.71%), Postives = 179/237 (75.53%), Query Frame = 1
BLAST of Spo17577.1 vs. NCBI nr
Match: gi|645243077|ref|XP_008227815.1| (PREDICTED: uncharacterized protein LOC103327288 [Prunus mume]) HSP 1 Score: 288.1 bits (736), Expect = 1.400e-74 Identity = 141/186 (75.81%), Postives = 161/186 (86.56%), Query Frame = 1
BLAST of Spo17577.1 vs. NCBI nr
Match: gi|1009148202|ref|XP_015891811.1| (PREDICTED: uncharacterized protein LOC107426207 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 279.3 bits (713), Expect = 6.300e-72 Identity = 147/233 (63.09%), Postives = 173/233 (74.25%), Query Frame = 1
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJF0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059950 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 2.300e-129 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDK9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g122330 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.800e-84 Identity = 168/245 (68.57%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Match: M5XBC2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011210mg PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.500e-75 Identity = 151/237 (63.71%), Postives = 179/237 (75.53%), Query Frame = 1
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Match: C6TKG7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 7.500e-72 Identity = 137/177 (77.40%), Postives = 151/177 (85.31%), Query Frame = 1
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NN66_GOSAR (Uncharacterized protein 17.2 kDa protein in melC2-rnhH intergenic region OS=Gossypium arboreum GN=F383_22398 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 7.500e-72 Identity = 136/186 (73.12%), Postives = 156/186 (83.87%), Query Frame = 1
BLAST of Spo17577.1 vs. TAIR (Arabidopsis)
Match: AT1G02475.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 242.7 bits (618), Expect = 2.300e-64 Identity = 113/152 (74.34%), Postives = 133/152 (87.50%), Query Frame = 1
BLAST of Spo17577.1 vs. TAIR (Arabidopsis)
Match: AT4G01883.1 (Polyketide cyclase / dehydrase and lipid transport protein) HSP 1 Score: 224.9 bits (572), Expect = 5.000e-59 Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 1
BLAST of Spo17577.1 vs. TAIR (Arabidopsis)
Match: AT1G02470.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 195.7 bits (496), Expect = 3.200e-50 Identity = 114/234 (48.72%), Postives = 153/234 (65.38%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17577.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17577.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17577.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17577.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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