Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGAATAAAGCCACAAGCTTTGTTGTTGCAAAGCAAGAAGAAGAAGGCGCCAAGTAGGATCAGTCCCACTACTATCGTTTTGTTCAGCTTAATTGTTTTCATGGTTGTCTTTTTCATTTTCTCGGCGTACAGACATTTTTCTCACAGGTATTTTTTCTTCTTTTTTAATTTTCTCCCCCCTTCTATCTATTTATTTTTTTTTTCTGTAATTTCAAGATTTTATACCTTTTTCGTTTGATTTTAGTTTCTTGGATTTTGAGGGAAAATGGAAAGAACCTTGATTTGGGTTTTATAATTTAGATCATTTGTTGACATTTGAGCTTTCTTTTACTTAATAAAATGCATGCTTTTTGATGAAAATGTTGAATTGAGTTTGCAAAGTTAGAGAAGCAGATTGGTTTGTTGTTGGGATGTTTCAGGTTTGGCTAAATTTTGGAAATTTTCAGCTCAATTTGTACGTTTTATGTGGTTTTAGTTGAGAAATACTAATTTAACATTGGTCTAGTTTGGGGATAGCAAAAATGCTCGCTCTTTGTGGCCTTGAAACAGTTTTTAAGCTGCTTTTGGCTCAAATTTGGGAACTTTCAGCTTCATTATGAATTTCCCAAAACAGTTTATGATTGGGAGTTTGATTTAGGGAAACTTCAATCAATTTGCCTTGTTGTTATAGGTTTTAGTTTGAGAAATCAAAATTGATCAACTTAAGGGAGTACATGGCAAGTGTGTTCATTGTTGGTACATTATTTAAATATGATTCGTGTTCAATTTTTGTGACCTTTTTCAGCTTGATTTTGGGGGTGGATGTTTGATAAAGGGTTTCCGCAGTACACTGAAAGAGTGAAAGCTACTGAATTATTTAAATAGGGTTCATGATTGGTTTGTTGTTTACGACTTATGTTTTTTTGAGTTTTTTGTAATTTAGTGCATTTCTTGGTACTTGACAGCCTTTTTTTGTCTTCTTTTTGTTAATAATCTCTGCTAGGTCAGTGCACCCAGAGGAGCAGATACATCTTGGAGGTCGCAAGGTAAAAATGTTAGTGTTTATTAATGATCACTGTCTTCTTGTTCAATTGATTAACAAGCTATGGGTTCATATGGACTAAGTAATACGTCAATTCATTAATGTATCATGTGGCAAATGCACTTCTCTAGCTCAATTTCTTATAATCTGTTTTGTCCTATGTTTTAGGGTCTCAGTGAGCTGAATCTGAAGAGTACTGATGTTCCAAAATATGCGGTATGTACTGATTATGCTAATACACTAGTTTTCTCCTTCTCGTCCCCATTCCACCACTGTTTTTAAATTGAGTTATGTATGTGAATCTATCCAAAATCTATTTCTATCTTCGAAATGTGACTATAGTTTCAGGACATCCCGAAATAGTATATTTGACTTATTTCTAGATATAGAGAGATTATTGAGTGTTTCTTCCCCTATGTTTATCAGCCTGGTCTTGTTTTAGTCCTATCAAAACCTTGGTTTCTTTTTCCTAGCTATTTATCTTTCTGTCTTATGCTAGGTCATCCAAACTTCAAAAGGCGCTATCGCTGTCGAACTGTTCAAGGACGGATCTCCTGAAATTGTTGATGAATTTATCGAGTTATGGTGAGTACGAGAACTCTCAGTCCTGATGTTAATCTCATGCTTTAGTTGTTTTATGAGACATTTATTACACTAGAATCCGGAGTAAAATACAATTATTTGCCTTTTCTGTTTGTTGGACTGATTTGATGCCTAAAACCTCTAAAGGTTCAAATACACGAGATGGCATCACAGAGTTATAGTATGCTATATGGAATTTGGCCCATTTCCGTGCCCATCTTTCTCACCCTGTATTTTTTCTACTTACATGGCTCTGTTATGCCTAAAGGAGGGGAGAAAATGAGAAATATGGCTCATTCGAAGATTCAAAGGGAGTTTTGTACTCTCTCTGTAAATAGCTTTTGTGTGCCCTTAGTTTTCTTCTGTTATATTGGTATCCTTAATCCTAATGATATCCTCATATGGTGACTACTCCTACTAGGGATCAAGTTATAATCTACTACGTATATCAAAATGTTGATCTCAAAGTCTGCCCCTAAAATTCTTAGACAGTGACTTAATTTTGTTCTGAAGCTGTTTGCTGACCAATGGGACTGTGGCCTTACAATCTTTCTCTCTCCATGCAAAGCGTCACACGCAAGAGCGCGCACACACACACACACACACACACACAATTTTCACTTTCCTTCTTTTCTTTCCTTTTATTGGTTTACAATCTCCAAAGCAAGGTAGGTCAACATTTAAACATATGCTCGTGTGAAACTAAAGTACTAAACTATTGAGCAGCTGAGCCCCATTGAGTTGTGCACATGTTGATTTGTTCCACTTTGAGATAAAGGAGAGGAAATAACCACCTCTTTAAGTCCAGCGAACTACTCTGATTGTCAATTGGATTTAGGTTGTAACTTAGATTGTGTTATAGGTGGTTCGAGGAAACATTCTTCTATAATAGAACATGAATCTATGAGTTTCGATAAATAACTATGGAAGTGTCTGATGAAACTAATTTTGCAGTCAGAAAGGGCATTTCAAAGGGATGCAATTCCATCGTGTGATAAAGCATTACGTGATTCAGGCAGGGGATGTCCACAGTATTGGACCTGCTGAACAATGGACCCTCAAGGGGAAGCACTACAGCCAACTCGATAAAAGGTTTACTAGCTTTGTTTTTTAGAATTATGTTTTTTTTTATTGCACATCTATACAAATGATGTCATTTCCCCCTCAAAAAATAAAATATAAATGATGTCATTTTTATGCAGTGTAAAGCATGAGGCTTTTATGCTTGGAACCTCCAAGGCAAAGCGTGACAATAAAGGATTTGAGCTCTATATAACAACAGCACCCATACCAGACCTAAATGAAAAAATAACTGTTTTCGGAAGAGTTATCAAGGGAGAGGAGGTTGTTCAGGTAAAATTTGTGTCTTCTAAGTTCCAACTTCACTGTACATTTACTTAAGGATGCTTAAATTTGTGTCTTCCAAGGCCCTGTTCTTTAGAGCTGAACTGAACCGAACTGAACTTAAATTAAATTAAGTGAACTGAACTTAAATTAAATTAAGTGAACTGAACTGAAATTAAATTAAGTGAACTGTGCTATACATCCACCTAAACAGCCCATACTACAAACATATACAAGGAGAGGTAAAAGGCAGGCAGCGACACATGACAAAGTGGAAACAGAAACAGAATCAGGACCTGACAAGGCAGAAGGGAGGGGAGGAACCGTGTAGTGGGTGCAGCCCTTAGCAGCAGCCCTTGGGATCATTAAAGCTTTTGTCTCATTGCAATTATCCTAGTACTGTATTTATGTCTTTTGTCTTATGCTAGCCTAAGAGGTATTTAAGAAGAAGGAAGAGAAATAGAAAGCCATCTGGAGAGTAATTTGGTTGTTCTGGGAGAGTGAGAACCTCTCGAATGTTCTCTGGTGTATTCAAGCTTTAAGCTTTATCATTAATATAATCAGATACCTTTTCTTCCCTATTTGTGAGTTTACTGTAATCTGAGTCATTTGGTTGCTTGGAATATCTGAATTCTTTGCACTTGGTATACCTCAAACACTCAACGGCTAGATAATGTCGAACTGACCATTGGAGAGGTGAAGGAGCAACTTGGTTCCTTGGAAGGAAAGTTTGAGAGCTTGGCTGAATCCATTGGCAGGATTGTAGCAGAAGCTGTGGTTCAACAAATGAATACCTTGAAGGAAACCCTCCACGAACAGTCCCACAAAACAGGGGAGACAAAAGCTTTAATGATCCCAAGGGCTGCTGCTAAGGGCTGCACCCACTACATGGTTCCTCCCCTCCCTTCTGCCTTGTCAGGTCCTGATTCTGTTTCTGTTTCCACTTTGTCATGTGTCGCTGCCTGCCTTTTACCTCTCCTTGTATATGTTTGTAGTATGGGCTGTTTAGGTGGATGTATAGCAAACTGAACTGAAATTAAATTAAGTGAACTGAATTGAACTGAATGCTCCTAAACTGAACTGGACTTAACTGCGAGATAAGTCCTGAAATTGCAGTTAAACCAAAAAAAACAAGGCCTTTCCAACTTTACTGTACATTTTTTCTTTTTCTTACAAGGATACACATTTACTTACAATGTTGCTAATGATTCTTGATAATGGGTTTTTGACTATGTTCAGGAAATCGAGGAGGTGGACACCGACAACCATTATGTACCTAAATCAACCATTGGCATTATGGATGTGACCCTTGAACATAAGTTGTAA ATGGCAAGAATAAAGCCACAAGCTTTGTTGTTGCAAAGCAAGAAGAAGAAGGCGCCAAGTAGGATCAGTCCCACTACTATCGTTTTGTTCAGCTTAATTGTTTTCATGGTTGTCTTTTTCATTTTCTCGGCGTACAGACATTTTTCTCACAGGTCAGTGCACCCAGAGGAGCAGATACATCTTGGAGGTCGCAAGGGTCTCAGTGAGCTGAATCTGAAGAGTACTGATGTTCCAAAATATGCGGTCATCCAAACTTCAAAAGGCGCTATCGCTGTCGAACTGTTCAAGGACGGATCTCCTGAAATTGTTGATGAATTTATCGAGTTATGTCAGAAAGGGCATTTCAAAGGGATGCAATTCCATCGTGTGATAAAGCATTACGTGATTCAGGCAGGGGATGTCCACAGTATTGGACCTGCTGAACAATGGACCCTCAAGGGGAAGCACTACAGCCAACTCGATAAAAGTGTAAAGCATGAGGCTTTTATGCTTGGAACCTCCAAGGCAAAGCGTGACAATAAAGGATTTGAGCTCTATATAACAACAGCACCCATACCAGACCTAAATGAAAAAATAACTGTTTTCGGAAGAGTTATCAAGGGAGAGGAGGTTGTTCAGGAAATCGAGGAGGTGGACACCGACAACCATTATGTACCTAAATCAACCATTGGCATTATGGATGTGACCCTTGAACATAAGTTGTAA ATGGCAAGAATAAAGCCACAAGCTTTGTTGTTGCAAAGCAAGAAGAAGAAGGCGCCAAGTAGGATCAGTCCCACTACTATCGTTTTGTTCAGCTTAATTGTTTTCATGGTTGTCTTTTTCATTTTCTCGGCGTACAGACATTTTTCTCACAGGTCAGTGCACCCAGAGGAGCAGATACATCTTGGAGGTCGCAAGGGTCTCAGTGAGCTGAATCTGAAGAGTACTGATGTTCCAAAATATGCGGTCATCCAAACTTCAAAAGGCGCTATCGCTGTCGAACTGTTCAAGGACGGATCTCCTGAAATTGTTGATGAATTTATCGAGTTATGTCAGAAAGGGCATTTCAAAGGGATGCAATTCCATCGTGTGATAAAGCATTACGTGATTCAGGCAGGGGATGTCCACAGTATTGGACCTGCTGAACAATGGACCCTCAAGGGGAAGCACTACAGCCAACTCGATAAAAGTGTAAAGCATGAGGCTTTTATGCTTGGAACCTCCAAGGCAAAGCGTGACAATAAAGGATTTGAGCTCTATATAACAACAGCACCCATACCAGACCTAAATGAAAAAATAACTGTTTTCGGAAGAGTTATCAAGGGAGAGGAGGTTGTTCAGGAAATCGAGGAGGTGGACACCGACAACCATTATGTACCTAAATCAACCATTGGCATTATGGATGTGACCCTTGAACATAAGTTGTAA MARIKPQALLLQSKKKKAPSRISPTTIVLFSLIVFMVVFFIFSAYRHFSHRSVHPEEQIHLGGRKGLSELNLKSTDVPKYAVIQTSKGAIAVELFKDGSPEIVDEFIELCQKGHFKGMQFHRVIKHYVIQAGDVHSIGPAEQWTLKGKHYSQLDKSVKHEAFMLGTSKAKRDNKGFELYITTAPIPDLNEKITVFGRVIKGEEVVQEIEEVDTDNHYVPKSTIGIMDVTLEHKL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17603.1 vs. NCBI nr
Match: gi|731336707|ref|XP_010679404.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 411.4 bits (1056), Expect = 1.100e-111 Identity = 208/234 (88.89%), Postives = 218/234 (93.16%), Query Frame = 1
BLAST of Spo17603.1 vs. NCBI nr
Match: gi|567904072|ref|XP_006444524.1| (hypothetical protein CICLE_v10022021mg [Citrus clementina]) HSP 1 Score: 309.7 bits (792), Expect = 4.400e-81 Identity = 153/234 (65.38%), Postives = 188/234 (80.34%), Query Frame = 1
BLAST of Spo17603.1 vs. NCBI nr
Match: gi|823147086|ref|XP_012473455.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial-like [Gossypium raimondii]) HSP 1 Score: 305.8 bits (782), Expect = 6.300e-80 Identity = 153/236 (64.83%), Postives = 185/236 (78.39%), Query Frame = 1
BLAST of Spo17603.1 vs. NCBI nr
Match: gi|1000974922|ref|XP_015572340.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Ricinus communis]) HSP 1 Score: 305.8 bits (782), Expect = 6.300e-80 Identity = 155/234 (66.24%), Postives = 186/234 (79.49%), Query Frame = 1
BLAST of Spo17603.1 vs. NCBI nr
Match: gi|590719718|ref|XP_007051133.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 303.9 bits (777), Expect = 2.400e-79 Identity = 150/234 (64.10%), Postives = 184/234 (78.63%), Query Frame = 1
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F2T0_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121970 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 7.500e-112 Identity = 208/234 (88.89%), Postives = 218/234 (93.16%), Query Frame = 1
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Match: V4VWR5_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10022021mg PE=3 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.100e-81 Identity = 153/234 (65.38%), Postives = 188/234 (80.34%), Query Frame = 1
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Match: A0A0D2MU04_GOSRA (Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G049900 PE=3 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 4.400e-80 Identity = 153/236 (64.83%), Postives = 185/236 (78.39%), Query Frame = 1
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Match: A0A061DRF7_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_004829 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.700e-79 Identity = 150/234 (64.10%), Postives = 184/234 (78.63%), Query Frame = 1
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Match: A0A165G110_LINUS (Peptidyl-prolyl cis-trans isomerase-peptidyl-prolyl cis-trans isomerase activity, protein folding OS=Linum usitatissimum PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.700e-79 Identity = 152/233 (65.24%), Postives = 180/233 (77.25%), Query Frame = 1
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Match: CP21D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP21-4 OS=Arabidopsis thaliana GN=CYP21-4 PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.600e-67 Identity = 137/235 (58.30%), Postives = 172/235 (73.19%), Query Frame = 1
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Match: CP21C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial OS=Arabidopsis thaliana GN=CYP21-3 PE=2 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.100e-63 Identity = 126/233 (54.08%), Postives = 166/233 (71.24%), Query Frame = 1
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Match: CPY71_ARATH (Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis thaliana GN=CYP71 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.800e-21 Identity = 56/161 (34.78%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Match: CP18B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-2 OS=Arabidopsis thaliana GN=CYP18-2 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.300e-19 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 1
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.900e-18 Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 1
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Match: AT3G66654.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 256.1 bits (653), Expect = 2.000e-68 Identity = 137/235 (58.30%), Postives = 172/235 (73.19%), Query Frame = 1
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Match: AT2G47320.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 244.6 bits (623), Expect = 6.100e-65 Identity = 126/233 (54.08%), Postives = 166/233 (71.24%), Query Frame = 1
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Match: AT3G44600.1 (cyclophilin71) HSP 1 Score: 104.4 bits (259), Expect = 9.900e-23 Identity = 56/161 (34.78%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Match: AT2G36130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 98.2 bits (243), Expect = 7.100e-21 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 1
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Match: AT1G01940.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 82.8 bits (203), Expect = 3.100e-16 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17603.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17603.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17603.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17603.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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