Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGATCAGCCATTTACAACCATGTCTACTACTTCTTCAAATTCTCCTCCTCATCTTCCTTCTACAGAAAAGAAACATTGGTGGCTAAGCACCAAGAAGGTAATTTTCAATCTTTAATTTCTTACAAATTTCAATCTTTTTTGTTCATGGGCAATTTTAATTTTGTCTAATTTTATTGGGTATCAATCAAAATCCAAAATTTCACAACATTTTAGCTCTAATTTGTCAAAGATTTGAATTTTTTTTATGTTTAATTTGTCAAAGTTTAAAATGGGTTTGAATCAAAGATTGAAACTTTTCATGTTAATTTGTCAAAGTTTACCACATTTGATCTCTAATTTGTCATAAATTTGAGCTAAAATCAAATGGGTATCCCTTAATTTGTCTAAATTTTAATGGGTTTGACTCAAAAATTGAATCTTTTTTCATATCTAAATGTTGAATTGATCATTTCATTTACAGATTGTAGACAAATATGTAAGAGAAGCAAGAGTAATGATCTCAACTCGAGAACAGAGTGAGATCAACTCAGCACTGAGTCAACTCGAAGCGGCCCTCTTTCTCTCTCCTAAATACGAACCCGCACTCGAACTCAAAGCTCGATGTCTTCTCTACCTAAGACGATACAAAGAGGTTGCAGATATGCTTCAAGATTACATTCCGAGTTACAAGATGTCTGACTCGGATGACTCGTCTGGGTCATCATCGGATAACTCGAACTCGTCGTCACAAACTCTGTCAAGAGAACGAGTCAAGCTGTTGGGATCGTCGTCTAACTCGGACCTTAACTCGTCGGGTTGTGATTACTCGACCTCCTTCAAATGCTTCTCTGTTTCTGACCTTAAGAAAAAAGTTCTCTCTGGCTTTTACAAGAACTGTGATAAAGAAGGGCAATGGAGGTAATTTCTTGTTAATTTTACTGTTAATTAACTTATTAATTTAATTAAAATTACGTGTCAATCAAAATGTGTTGAGGTAATTTCTTGTTAATTTGATTTTTAATTAACCTATTAATTTAACTAAAACTACATGTCAATCAAAATGTAATCCAGTTAATTTCTTGTTAATTTTACTGTTAATTAACCTATTAATTTAACTAAAATTACGTGTCAATCAAAATGTAATCGAGTTAATTTCTTGTTAATTTTACTGTTAATTAACCTATTAATTTAACTAAAATTACGTGTCAATTAAAACGTAATTGAGGTAATTTCTTGTTAATTTTACTGTTAATTAACCTATTAATTTAACTATACATGTCAATCAAAATGTAACCGAGTTAATTTCTTGCTAATGTTACTGTTAATTAACCTATTAATTTAACTAAAACTATGTGTCAATTAAAATGTAATGGAGGTAATTTCTTGTTAATTAACCTATTAATTTTTGACTAAAACTACGTGTCCATCAAAATGTAGTTGAGTTAATTTCTTGTTAACTTAACTGTTAATTAACCTATTAATTTAACTAAAATTACATGTCAATCAAAATATGTCCAAGTAATTTCTTGTTAATTTTACTTCTAATTAACCTATTAATTTAATTGAGTAAAAATATAATATGATCCCATTAATCGAAAGGAAACATGATCTTGTACATTACGCTAGGATTAGTAAGCATTATGCCCTCCACCGCCACCCTGTTTTTTATGCTCTTCGATCTCATCAAAACACACTTTTTTTCCTGGTTCACATGGGTGTTTTTGGAATTTACCCGAGTCAGACCGAGTTGACTCAGCTTCATGAGCCATTTTGTAATTAGGGAAACTAAAAGATTTAATCCCTTATATAGTCATGTATATAATCATGGTAAAATTAAAAAGATGATTTTCCTTAATTAGGATGATTCTTGTAAATTTACCGAGTTAGCCCGAGTTGACTCAGTTTTGCTCTTGATCCCAATCATAGAGAATGTGTTTCCTACCTTTAGGACAGTTGTATGGTGTTAATTTGCACAATCATTTTCTAAATAGGTGGTGTGTGACAGTTGTATCGATACCTTTTTTACACCTAATAATTTTTATATATTCCGTATGTGATTTGATACTCATTTAATTTGAGATTTTTGTAAAAACTAATTGGTTTAATGTTAATTTTTTTTTTTAAAGAATTATACGGTTTTGAGTTGAGAACAACGCAAATTATTATTTAAAAGTGGTGTACAATAAATATATATTCCGTATTTGATAAAATTGGAACAATTTGGCTAAAGTTTTGTATCTATTGATCCTTTTTTCAGGTACTCAGTACTTGGACAAGCATGTTGCCACCTCGGATTAATGGAGGACGCCTTGGTCCTCCTCCAACACGGCAAACGCCTCGCCTCCGCCGCCTTCCGCCGTGAAAGCATTTGTTGGTCCGACGACAGCTTTGCATTCACCGTATCCTCTGCCACCTCCGACTCACTCACTGAGTCACAGCCACTCACAGAGACCGAGTCAATTTCCCACCTCATTGCCCACATCAAGCTCCTCCTCCGCCGCCGTGCCGCCGCCCTTGCCGCTTTAGATGCCGGCCTCTTCACGGAGGCGATTAGACACTTTTCCAAGATATTAGAGGGCCGCCGCCCGGCCCCACAGGCGTTTCTTGCGGAGTCTTACCTTCACCGGGCCTCTGCTTATAAATCAGCGGGCCGGACTGCTGAGAGTATTGCTGACTTAAACCGGGCCCTTGCATTGGAACCGACCTCAACCGTGGCCCTACAATCACGGGCCGGGTTGTTTGAGTTCATTGGGTGTATTACTGATTCTGTTCATGATCTTGAACATGTGAAGTTGATTTATAATTCTATTTTAAGAGACCGTAAACCACCGGGCCCAGTGTGGAAACCGAGGGCGGTTCCGTATAGAGAAATTCCGGGCCGGCTTTGTTCTCTGGGTTCGAAAATTCAGCAATTGAAGCAGAGGATTGCAATGGGGGAGACAGGCAATGTGGATTATTTTAAGTTGATTGGGTTAAGGAGGGGTTGTTCGAGGTCCGAATTGGACCTGGCTCATTTGTTGTTAGTTTTGAGGCATAAACCCGAGAAGTCAATGAGTTTTTTTGTGTTTTAG ATGGTGGATCAGCCATTTACAACCATGTCTACTACTTCTTCAAATTCTCCTCCTCATCTTCCTTCTACAGAAAAGAAACATTGGTGGCTAAGCACCAAGAAGATTGTAGACAAATATGTAAGAGAAGCAAGAGTAATGATCTCAACTCGAGAACAGAGTGAGATCAACTCAGCACTGAGTCAACTCGAAGCGGCCCTCTTTCTCTCTCCTAAATACGAACCCGCACTCGAACTCAAAGCTCGATGTCTTCTCTACCTAAGACGATACAAAGAGGTTGCAGATATGCTTCAAGATTACATTCCGAGTTACAAGATGTCTGACTCGGATGACTCGTCTGGGTCATCATCGGATAACTCGAACTCGTCGTCACAAACTCTGTCAAGAGAACGAGTCAAGCTGTTGGGATCGTCGTCTAACTCGGACCTTAACTCGTCGGGTTGTGATTACTCGACCTCCTTCAAATGCTTCTCTGTTTCTGACCTTAAGAAAAAAGTTCTCTCTGGCTTTTACAAGAACTGTGATAAAGAAGGGCAATGGAGGTACTCAGTACTTGGACAAGCATGTTGCCACCTCGGATTAATGGAGGACGCCTTGGTCCTCCTCCAACACGGCAAACGCCTCGCCTCCGCCGCCTTCCGCCGTGAAAGCATTTGTTGGTCCGACGACAGCTTTGCATTCACCGTATCCTCTGCCACCTCCGACTCACTCACTGAGTCACAGCCACTCACAGAGACCGAGTCAATTTCCCACCTCATTGCCCACATCAAGCTCCTCCTCCGCCGCCGTGCCGCCGCCCTTGCCGCTTTAGATGCCGGCCTCTTCACGGAGGCGATTAGACACTTTTCCAAGATATTAGAGGGCCGCCGCCCGGCCCCACAGGCGTTTCTTGCGGAGTCTTACCTTCACCGGGCCTCTGCTTATAAATCAGCGGGCCGGACTGCTGAGAGTATTGCTGACTTAAACCGGGCCCTTGCATTGGAACCGACCTCAACCGTGGCCCTACAATCACGGGCCGGGTTGTTTGAGTTCATTGGGTGTATTACTGATTCTGTTCATGATCTTGAACATGTGAAGTTGATTTATAATTCTATTTTAAGAGACCGTAAACCACCGGGCCCAGTGTGGAAACCGAGGGCGGTTCCGTATAGAGAAATTCCGGGCCGGCTTTGTTCTCTGGGTTCGAAAATTCAGCAATTGAAGCAGAGGATTGCAATGGGGGAGACAGGCAATGTGGATTATTTTAAGTTGATTGGGTTAAGGAGGGGTTGTTCGAGGTCCGAATTGGACCTGGCTCATTTGTTGTTAGTTTTGAGGCATAAACCCGAGAAGTCAATGAGTTTTTTTGTGTTTTAG ATGGTGGATCAGCCATTTACAACCATGTCTACTACTTCTTCAAATTCTCCTCCTCATCTTCCTTCTACAGAAAAGAAACATTGGTGGCTAAGCACCAAGAAGATTGTAGACAAATATGTAAGAGAAGCAAGAGTAATGATCTCAACTCGAGAACAGAGTGAGATCAACTCAGCACTGAGTCAACTCGAAGCGGCCCTCTTTCTCTCTCCTAAATACGAACCCGCACTCGAACTCAAAGCTCGATGTCTTCTCTACCTAAGACGATACAAAGAGGTTGCAGATATGCTTCAAGATTACATTCCGAGTTACAAGATGTCTGACTCGGATGACTCGTCTGGGTCATCATCGGATAACTCGAACTCGTCGTCACAAACTCTGTCAAGAGAACGAGTCAAGCTGTTGGGATCGTCGTCTAACTCGGACCTTAACTCGTCGGGTTGTGATTACTCGACCTCCTTCAAATGCTTCTCTGTTTCTGACCTTAAGAAAAAAGTTCTCTCTGGCTTTTACAAGAACTGTGATAAAGAAGGGCAATGGAGGTACTCAGTACTTGGACAAGCATGTTGCCACCTCGGATTAATGGAGGACGCCTTGGTCCTCCTCCAACACGGCAAACGCCTCGCCTCCGCCGCCTTCCGCCGTGAAAGCATTTGTTGGTCCGACGACAGCTTTGCATTCACCGTATCCTCTGCCACCTCCGACTCACTCACTGAGTCACAGCCACTCACAGAGACCGAGTCAATTTCCCACCTCATTGCCCACATCAAGCTCCTCCTCCGCCGCCGTGCCGCCGCCCTTGCCGCTTTAGATGCCGGCCTCTTCACGGAGGCGATTAGACACTTTTCCAAGATATTAGAGGGCCGCCGCCCGGCCCCACAGGCGTTTCTTGCGGAGTCTTACCTTCACCGGGCCTCTGCTTATAAATCAGCGGGCCGGACTGCTGAGAGTATTGCTGACTTAAACCGGGCCCTTGCATTGGAACCGACCTCAACCGTGGCCCTACAATCACGGGCCGGGTTGTTTGAGTTCATTGGGTGTATTACTGATTCTGTTCATGATCTTGAACATGTGAAGTTGATTTATAATTCTATTTTAAGAGACCGTAAACCACCGGGCCCAGTGTGGAAACCGAGGGCGGTTCCGTATAGAGAAATTCCGGGCCGGCTTTGTTCTCTGGGTTCGAAAATTCAGCAATTGAAGCAGAGGATTGCAATGGGGGAGACAGGCAATGTGGATTATTTTAAGTTGATTGGGTTAAGGAGGGGTTGTTCGAGGTCCGAATTGGACCTGGCTCATTTGTTGTTAGTTTTGAGGCATAAACCCGAGAAGTCAATGAGTTTTTTTGTGTTTTAG MVDQPFTTMSTTSSNSPPHLPSTEKKHWWLSTKKIVDKYVREARVMISTREQSEINSALSQLEAALFLSPKYEPALELKARCLLYLRRYKEVADMLQDYIPSYKMSDSDDSSGSSSDNSNSSSQTLSRERVKLLGSSSNSDLNSSGCDYSTSFKCFSVSDLKKKVLSGFYKNCDKEGQWRYSVLGQACCHLGLMEDALVLLQHGKRLASAAFRRESICWSDDSFAFTVSSATSDSLTESQPLTETESISHLIAHIKLLLRRRAAALAALDAGLFTEAIRHFSKILEGRRPAPQAFLAESYLHRASAYKSAGRTAESIADLNRALALEPTSTVALQSRAGLFEFIGCITDSVHDLEHVKLIYNSILRDRKPPGPVWKPRAVPYREIPGRLCSLGSKIQQLKQRIAMGETGNVDYFKLIGLRRGCSRSELDLAHLLLVLRHKPEKSMSFFVF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17631.1 vs. NCBI nr
Match: gi|902240636|gb|KNA26044.1| (hypothetical protein SOVF_001100 [Spinacia oleracea]) HSP 1 Score: 845.1 bits (2182), Expect = 5.600e-242 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1
BLAST of Spo17631.1 vs. NCBI nr
Match: gi|731336615|ref|XP_010679356.1| (PREDICTED: uncharacterized protein LOC104894747 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 765.0 bits (1974), Expect = 7.300e-218 Identity = 398/453 (87.86%), Postives = 422/453 (93.16%), Query Frame = 1
BLAST of Spo17631.1 vs. NCBI nr
Match: gi|870858433|gb|KMT09942.1| (hypothetical protein BVRB_5g121590 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 752.3 bits (1941), Expect = 4.900e-214 Identity = 392/445 (88.09%), Postives = 415/445 (93.26%), Query Frame = 1
BLAST of Spo17631.1 vs. NCBI nr
Match: gi|976929608|gb|KVI12450.1| (Tetratricopeptide-like helical [Cynara cardunculus var. scolymus]) HSP 1 Score: 576.6 bits (1485), Expect = 3.700e-161 Identity = 305/441 (69.16%), Postives = 361/441 (81.86%), Query Frame = 1
BLAST of Spo17631.1 vs. NCBI nr
Match: gi|703064648|ref|XP_010087254.1| (hypothetical protein L484_009763 [Morus notabilis]) HSP 1 Score: 560.8 bits (1444), Expect = 2.100e-156 Identity = 301/437 (68.88%), Postives = 356/437 (81.46%), Query Frame = 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S446_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001100 PE=4 SV=1) HSP 1 Score: 845.1 bits (2182), Expect = 3.900e-242 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C8L4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121590 PE=4 SV=1) HSP 1 Score: 752.3 bits (1941), Expect = 3.400e-214 Identity = 392/445 (88.09%), Postives = 415/445 (93.26%), Query Frame = 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Match: A0A118K7M7_CYNCS (Tetratricopeptide-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_009054 PE=4 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 2.600e-161 Identity = 305/441 (69.16%), Postives = 361/441 (81.86%), Query Frame = 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Match: W9QCY9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009763 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 1.500e-156 Identity = 301/437 (68.88%), Postives = 356/437 (81.46%), Query Frame = 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Match: A0A061DZ17_THECC (Heat shock protein DnaJ with tetratricopeptide repeat isoform 1 OS=Theobroma cacao GN=TCM_004784 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 3.300e-156 Identity = 301/442 (68.10%), Postives = 359/442 (81.22%), Query Frame = 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Match: AT4G02100.1 (Heat shock protein DnaJ with tetratricopeptide repeat) HSP 1 Score: 526.2 bits (1354), Expect = 2.000e-149 Identity = 280/429 (65.27%), Postives = 340/429 (79.25%), Query Frame = 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Match: AT2G47440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 512.7 bits (1319), Expect = 2.300e-145 Identity = 269/424 (63.44%), Postives = 332/424 (78.30%), Query Frame = 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Match: AT3G62570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 463.8 bits (1192), Expect = 1.200e-130 Identity = 244/430 (56.74%), Postives = 326/430 (75.81%), Query Frame = 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Match: AT1G02650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 415.6 bits (1067), Expect = 3.900e-116 Identity = 226/419 (53.94%), Postives = 298/419 (71.12%), Query Frame = 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Match: AT5G12430.1 (Heat shock protein DnaJ with tetratricopeptide repeat) HSP 1 Score: 77.8 bits (190), Expect = 1.900e-14 Identity = 70/271 (25.83%), Postives = 130/271 (47.97%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17631.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo17631.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo17631.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo17631.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|