Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGATTTAATAGACAGACTAGTCTATAATAATAGAGGATACTAAGGGTATACTCGTAATTGTACTATTGTACGATATTATTATATATAAGCATCAAACACCAGTGTGTATGTTCAGACATACAACCCCATAAACATCTGACACTCCAAATCATCCACTGATCTGAAAGATGCAGAAATCAACGGTGGGTATTGATTACTGGATGAAATGGCAAGTCCCTGTCTGTGGGTTGATCATTGTAATCCCAGCTGCAATTGCCATCAAATTGATCAAGAATAAGACCATTAATGGTGAAGAAGATACCCAGAATTCAGTATTATGGGTTCCTTGCTGGAGAAAGCTCAGCCCCAAATGGCTTCTTCTCTACAGAGCTTTCGCTTTTCTTACTATGGCTTACCTTCTCTTCCAGATGCTTCATTCCTATGGCTCTTATGCTTTCTATTTTTATACCCAGTTAACCTTCTTTCACTCTCTTCCTCCATTTTCACTTTTCTCCAATTTTTTCTGATTTCACTGTCTGGTGATCTGCAGGTGGACATTTTCACTGGTTATGGTCTATTTTGCGGTATATCCTGTATCCTGTCCTTTTCCTGTTTACAGCTTTCTTCTTCTTCTTATGCTTCTTTATTCATTCATGTAGATTGGAACCATTGTTTCTGCCCGAGGATGCTTTATGTCTACAGAGAAATCTCCAACAGGAAACGTAGAGAAAGACAAAGTTCTGAAAAACGGTTCAGAAGGCAATGAATCTGCTGCTGTTTTGGATTCAGGAAAGGGAGAAAGCCTCACAAAGTTGCAAAATCATGTTAAGAATGATGAAACTCGAGTTGGATTCTTAGGGTCACTTATGCAAATAATTTACCAGGTAAGTTGTGTCCTTGATTCATTCTTTTGGTGCTTGTTACTAGACATAACTAATTGAGTTCTTGATCCTTGTATCAGACTTCTGCAGGAGCTTCTGTGCTTACAGACTTGGTATTTTGGTGTGTATTGGTGCCAACAATGGCTGGAAAACAGTTTGAGCTCACCTTGGTCAGTGCTTGATTACAGTTAAGCTATTGTAGGTGTAGAATGTTGCAAAAACTTGCATTCTGTACTTTGACACAAACATCTAACATACAACCATAAGTTTCATGAAATCCAATATCAGCAATGTTGCGTTTCTACATGGTTCTGAAAATTAGAGATTAGTCTAGAATGCGCTTTGACTGCTAACAACATCTGATATATATTCCTGCAGTTGATAGGATTCATTCACTCACTGAATGCAGTCTTCCTGGTCATTGATTCCCTTCTTAATGCCATTGTAAGTTAAAAAATCTCCCTAATATTGGTGTTCATGCCTGCTTATATATATATATATATATAGATTAGCTGAAGTTTTTACTGTATCTTTCAGCCGTTTAAATGGTTTGGGTTTCTCTACTTTATACTTTGGAGCACCGCATACACCACATTCCAGTGGATTATTCATGCCTGTGGTGTCACATGGTAATCTCATTTCTCCTTAATAATCACCATCATCATCATCTTTCTGAATTCAAAGGTTGTTTATTTAACAGCAGAGTTTGAGTTTGATGCAGGTGGCCTTATCCCTTTCTAGACCTCTCAACCCCGTGGGCACCTCTATGGTAAATCAAGCAGATTCTCTTCTCTAATAACTTACTGTTTTGGACATTCCCTGATAAAAGATTATACATGACTGCAGGTATTTCGCATTGGCTGTTGTCCATGTTCCTTGTTATGCAGTATACATAATGCTGGTGAAAGGAAAAGACTCGATTTTTTCTAAGCTGTTCCCTCGAGCATTTGTGAGGTCATATTAACTTGCCTAATTACGCGTAATATAAATCTTATTGCTAGTAAACGAGTTATAAAACTCTCATTAAGTTTATAAGTTTTCATAAACAGCTGTTCTGTGTTACAGATCAGATCAACGGATATCACAGCACCACAAAGCAGCCTGAGCCCTGAGGCAGTATGA AGATTTAATAGACAGACTAGTCTATAATAATAGAGGATACTAAGGGTATACTCGTAATTGTACTATTGTACGATATTATTATATATAAGCATCAAACACCAGTGTGTATGTTCAGACATACAACCCCATAAACATCTGACACTCCAAATCATCCACTGATCTGAAAGATGCAGAAATCAACGGTGGGTATTGATTACTGGATGAAATGGCAAGTCCCTGTCTGTGGGTTGATCATTGTAATCCCAGCTGCAATTGCCATCAAATTGATCAAGAATAAGACCATTAATGGTGAAGAAGATACCCAGAATTCAGTATTATGGGTTCCTTGCTGGAGAAAGCTCAGCCCCAAATGGCTTCTTCTCTACAGAGCTTTCGCTTTTCTTACTATGGCTTACCTTCTCTTCCAGATGCTTCATTCCTATGGCTCTTATGCTTTCTATTTTTATACCCAGTGGACATTTTCACTGGTTATGGTCTATTTTGCGATTGGAACCATTGTTTCTGCCCGAGGATGCTTTATGTCTACAGAGAAATCTCCAACAGGAAACGTAGAGAAAGACAAAGTTCTGAAAAACGGTTCAGAAGGCAATGAATCTGCTGCTGTTTTGGATTCAGGAAAGGGAGAAAGCCTCACAAAGTTGCAAAATCATGTTAAGAATGATGAAACTCGAGTTGGATTCTTAGGGTCACTTATGCAAATAATTTACCAGACTTCTGCAGGAGCTTCTGTGCTTACAGACTTGGTATTTTGGTGTGTATTGGTGCCAACAATGGCTGGAAAACAGTTTGAGCTCACCTTGTTGATAGGATTCATTCACTCACTGAATGCAGTCTTCCTGGTCATTGATTCCCTTCTTAATGCCATTCCGTTTAAATGGTTTGGGTTTCTCTACTTTATACTTTGGAGCACCGCATACACCACATTCCAGTGGATTATTCATGCCTGTGGTGTCACATGGTGGCCTTATCCCTTTCTAGACCTCTCAACCCCGTGGGCACCTCTATGGTATTTCGCATTGGCTGTTGTCCATGTTCCTTGTTATGCAGTATACATAATGCTGGTGAAAGGAAAAGACTCGATTTTTTCTAAGCTGTTCCCTCGAGCATTTGTGAGCTGTTCTGTGTTACAGATCAGATCAACGGATATCACAGCACCACAAAGCAGCCTGAGCCCTGAGGCAGTATGA ATGCAGAAATCAACGGTGGGTATTGATTACTGGATGAAATGGCAAGTCCCTGTCTGTGGGTTGATCATTGTAATCCCAGCTGCAATTGCCATCAAATTGATCAAGAATAAGACCATTAATGGTGAAGAAGATACCCAGAATTCAGTATTATGGGTTCCTTGCTGGAGAAAGCTCAGCCCCAAATGGCTTCTTCTCTACAGAGCTTTCGCTTTTCTTACTATGGCTTACCTTCTCTTCCAGATGCTTCATTCCTATGGCTCTTATGCTTTCTATTTTTATACCCAGTGGACATTTTCACTGGTTATGGTCTATTTTGCGATTGGAACCATTGTTTCTGCCCGAGGATGCTTTATGTCTACAGAGAAATCTCCAACAGGAAACGTAGAGAAAGACAAAGTTCTGAAAAACGGTTCAGAAGGCAATGAATCTGCTGCTGTTTTGGATTCAGGAAAGGGAGAAAGCCTCACAAAGTTGCAAAATCATGTTAAGAATGATGAAACTCGAGTTGGATTCTTAGGGTCACTTATGCAAATAATTTACCAGACTTCTGCAGGAGCTTCTGTGCTTACAGACTTGGTATTTTGGTGTGTATTGGTGCCAACAATGGCTGGAAAACAGTTTGAGCTCACCTTGTTGATAGGATTCATTCACTCACTGAATGCAGTCTTCCTGGTCATTGATTCCCTTCTTAATGCCATTCCGTTTAAATGGTTTGGGTTTCTCTACTTTATACTTTGGAGCACCGCATACACCACATTCCAGTGGATTATTCATGCCTGTGGTGTCACATGGTGGCCTTATCCCTTTCTAGACCTCTCAACCCCGTGGGCACCTCTATGGTATTTCGCATTGGCTGTTGTCCATGTTCCTTGTTATGCAGTATACATAATGCTGGTGAAAGGAAAAGACTCGATTTTTTCTAAGCTGTTCCCTCGAGCATTTGTGAGCTGTTCTGTGTTACAGATCAGATCAACGGATATCACAGCACCACAAAGCAGCCTGAGCCCTGAGGCAGTATGA MQKSTVGIDYWMKWQVPVCGLIIVIPAAIAIKLIKNKTINGEEDTQNSVLWVPCWRKLSPKWLLLYRAFAFLTMAYLLFQMLHSYGSYAFYFYTQWTFSLVMVYFAIGTIVSARGCFMSTEKSPTGNVEKDKVLKNGSEGNESAAVLDSGKGESLTKLQNHVKNDETRVGFLGSLMQIIYQTSAGASVLTDLVFWCVLVPTMAGKQFELTLLIGFIHSLNAVFLVIDSLLNAIPFKWFGFLYFILWSTAYTTFQWIIHACGVTWWPYPFLDLSTPWAPLWYFALAVVHVPCYAVYIMLVKGKDSIFSKLFPRAFVSCSVLQIRSTDITAPQSSLSPEAV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17658.1 vs. NCBI nr
Match: gi|902223822|gb|KNA19595.1| (hypothetical protein SOVF_059920 [Spinacia oleracea]) HSP 1 Score: 634.8 bits (1636), Expect = 8.600e-179 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo17658.1 vs. NCBI nr
Match: gi|731336779|ref|XP_010679441.1| (PREDICTED: uncharacterized protein LOC104894809 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 416.0 bits (1068), Expect = 6.300e-113 Identity = 212/313 (67.73%), Postives = 241/313 (77.00%), Query Frame = 1
BLAST of Spo17658.1 vs. NCBI nr
Match: gi|747065689|ref|XP_011079495.1| (PREDICTED: uncharacterized protein LOC105163000 isoform X1 [Sesamum indicum]) HSP 1 Score: 358.6 bits (919), Expect = 1.200e-95 Identity = 169/319 (52.98%), Postives = 230/319 (72.10%), Query Frame = 1
BLAST of Spo17658.1 vs. NCBI nr
Match: gi|698564767|ref|XP_009773071.1| (PREDICTED: uncharacterized protein LOC104223345 isoform X1 [Nicotiana sylvestris]) HSP 1 Score: 358.6 bits (919), Expect = 1.200e-95 Identity = 169/314 (53.82%), Postives = 230/314 (73.25%), Query Frame = 1
BLAST of Spo17658.1 vs. NCBI nr
Match: gi|698564770|ref|XP_009773072.1| (PREDICTED: uncharacterized protein LOC104223345 isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 357.5 bits (916), Expect = 2.700e-95 Identity = 168/317 (53.00%), Postives = 230/317 (72.56%), Query Frame = 1
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJD2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059920 PE=4 SV=1) HSP 1 Score: 634.8 bits (1636), Expect = 6.000e-179 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g122290 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 4.400e-113 Identity = 212/313 (67.73%), Postives = 241/313 (77.00%), Query Frame = 1
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Match: A0A022S605_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010201mg PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 2.100e-91 Identity = 164/313 (52.40%), Postives = 224/313 (71.57%), Query Frame = 1
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Match: W9QNH1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013859 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 3.400e-89 Identity = 173/317 (54.57%), Postives = 216/317 (68.14%), Query Frame = 1
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HYH7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 7.500e-89 Identity = 160/314 (50.96%), Postives = 220/314 (70.06%), Query Frame = 1
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Match: AT2G47115.1 (unknown protein) HSP 1 Score: 228.8 bits (582), Expect = 5.000e-60 Identity = 119/267 (44.57%), Postives = 159/267 (59.55%), Query Frame = 1
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Match: AT1G10660.2 (unknown protein) HSP 1 Score: 219.2 bits (557), Expect = 4.000e-57 Identity = 120/320 (37.50%), Postives = 186/320 (58.13%), Query Frame = 1
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Match: AT5G62960.1 (unknown protein) HSP 1 Score: 209.9 bits (533), Expect = 2.400e-54 Identity = 119/329 (36.17%), Postives = 182/329 (55.32%), Query Frame = 1
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Match: AT3G27770.1 (unknown protein) HSP 1 Score: 186.4 bits (472), Expect = 2.900e-47 Identity = 98/308 (31.82%), Postives = 170/308 (55.19%), Query Frame = 1
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Match: AT1G70505.1 (unknown protein) HSP 1 Score: 99.4 bits (246), Expect = 4.600e-21 Identity = 76/258 (29.46%), Postives = 120/258 (46.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17658.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17658.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17658.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17658.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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