Spo17668 (gene)

Overview
NameSpo17668
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNifU-like protein 1
Locationchr5 : 403254 .. 405742 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAACAAATTGTCTACTCCCTTCAATTCAGTTGTGTTGCGACTTGCGAGGGATTTTAGAATTCGTTTAAGCCTTTAACTTTTATCAATGGCTTCTTCCCTACCCTCAGCTGGATTGATGAACAACCCATCAATATCTTTCCCAAAAATCCAAGCCAACTCCAATAAATCTCCATCATTTGCTAATTTTGCTCAGAAAAGCCCCAAATTTCTGAAGTTGGTCAATCTGAAAAGGGTGATTAGAGCATCAGCAGCTTCAAATGGGTCTCCAGGGCTTTACTCTTCCAAGCAATTGGAGTTAACAGTGAAGAACGTTGACCTGGTTTTGGAAGATGTACGACCTTATCTCATTTCTGATGGTGGAAATGTTGATGTTGTGTCCGTTCAAGATGGAGTCATAACCCTTGAACTTCTAGGTTTCCTCTTCTCTTCTATTCATTTTCAATTGAAATACCTTCTTCTTTTTTGCATATTTGGTTTTTGATTATCAATTTTTTCGTTCAATCCCATTTGATAAGCTGTTGATCATCATTGATTTAATTGCCTTTTTAGTTTTAGAATTTTCATACCATTACATATGGGTGTGTGCAAAGGTGAAGTCTTTGATCATGGTTATGTGTTTTCTGTTGTTAATTTATCAAAGTTCCTTGATTAGGGGTTATGCTGTTAGGTTTTTGTTAACTAAACTTGCCTATTCAAGGTTCATATTTGGGTTTGGTTATCAATTTTTCTTTTAATCCATTTGATAAGCTGTTGATCAGCATTGATTTAATTGCCTTTATAGTTTTTGAAGTTGTCATACTATTATATATGGGTGTGAGCAAAGGTGAAGTCTTTGATCATGATTATGTGTTTGCTGTTGTTAATTCAATAATTCATCCAAGTTCCTTGAGTAGAGGTTATGGTGTTAGGTTTTTGTTAATGAACTTGCCTATTCAAGGTTCATTTAGGTTTATATGTGCGAAATTCGTCTGCTATTTGAAAGCATTCCATAATTTGCAGTCAATGTGATATTGTTTTTGGCTGCCTATTTCATGAAAAGGTATGTGACCTTGGCGATTTGAGGTGTTAATTATAGGAGGAGAGTCTATGGTGCTCATTGACATTTGAGAGTATGGTAGTGAGATGCAATGGACAAGCAATTAGGACGAGTGATTAAGCGGTTGGATCCCATAACATGAACAAGGAGAAAATAATTGTAATCGGATTACTTTATGAATACATGAGTATATACATGTATATATAACTGTTGCAGGGGGACTACAGTGCAACAGATTAACAACCTAATTGATGTCACATTGTCCTATTTGTTATGTGATACGGAATTTTCAGAATGTCAACTGATTTGTTTTGTTAATTACCTCATTTGAGCATCATTAAGCTTGATGTGAATTTGTCCTATTTGTTTATGCTAATTGTATGAATCAGTGTGCTGCATTTTCTTGACCAATAACTTGGAGATTTTAACCTTTCTTGGACAATCTTCTTCATCAACTAGAGAAACACGGGGTTATGGTCTATTTAGGATCTGTTGGATAATTTACAGGAACATAGGCTTCAAATGTTCAGTTATGCTCGATTTTTTTTTTCTACCTTCGCCTTTTCTTCCCTTCTTCGCCTTTATTAAGGCTTTAGTTTTTTTTTTGTCTACTTGGTTGATTTGTATGTTCCGTCTGCTCTGATCAAGTTTGAGGCCTGTACTTGTCCAAAAATTTGAAAATTTTACCCATTCTTGAACCCTCTACAATGTAGATTTCCATACCACAGCACTGAAAATTGTAAATTACATGTTAGGTTTGTCTTAATCACCTAAATTTATTCCACTCCCGCCGCCCTACAATAAACTTCGCGGGTGACTTTGTCTTCGTCACTTATGATTTCAGTAGATGTAAAGAATAAAATAATCAAGAGAAAGTCTTATGATTGAGAGAGAAACGGTACTATTCGAACCATTCATTTATAAGGGATTTTAATGGAAAGCAAAAGAGGATTATCATGGTTTTTTCAATTATAGTAATTTAAAAGTATACTGTTCTTGAAGTTTTGTAAATTTGATTTGGTAAATTCATATTGCATGACAGGAGCATGTGAGAGTTGTCCGAGCTCAACCACCACCATGAAAATGGGCATTGAAAAAGTTCTGAAAGAGAAGTTTGGAGATGCAGTCAAGGATATTCGTCAAGTCAATGAAGTACAAGTGAATGAAACAACCGTTGAGGTATATATATCTTCTTTAATATTCAAAATACAAGATCAACCTGTATTTCCGAGTAGCCATCTAAGAATACTTTGGTGTTGTAGGCGGTGAACAATCATCTAGATATACTTAGACCTGCTATCAGAAACTACGGTGGAGAGGTAGAAGTTTTAGCCATCGAGGGTGCGGATTGCACGGTTAGATATGGAGGACCAGAGACCATTGGCTCAGGAATAAAAGCAGCTATCAAAGAGAAGTTTCCAGACATTTCAAATGTGATCTTTACTAGTTAG

mRNA sequence

AGTAACAAATTGTCTACTCCCTTCAATTCAGTTGTGTTGCGACTTGCGAGGGATTTTAGAATTCGTTTAAGCCTTTAACTTTTATCAATGGCTTCTTCCCTACCCTCAGCTGGATTGATGAACAACCCATCAATATCTTTCCCAAAAATCCAAGCCAACTCCAATAAATCTCCATCATTTGCTAATTTTGCTCAGAAAAGCCCCAAATTTCTGAAGTTGGTCAATCTGAAAAGGGTGATTAGAGCATCAGCAGCTTCAAATGGGTCTCCAGGGCTTTACTCTTCCAAGCAATTGGAGTTAACAGTGAAGAACGTTGACCTGGTTTTGGAAGATGTACGACCTTATCTCATTTCTGATGGTGGAAATGTTGATGTTGTGTCCGTTCAAGATGGAGTCATAACCCTTGAACTTCTAGGAGCATGTGAGAGTTGTCCGAGCTCAACCACCACCATGAAAATGGGCATTGAAAAAGTTCTGAAAGAGAAGTTTGGAGATGCAGTCAAGGATATTCGTCAAGTCAATGAAGTACAAGTGAATGAAACAACCGTTGAGGCGGTGAACAATCATCTAGATATACTTAGACCTGCTATCAGAAACTACGGTGGAGAGGTAGAAGTTTTAGCCATCGAGGGTGCGGATTGCACGGTTAGATATGGAGGACCAGAGACCATTGGCTCAGGAATAAAAGCAGCTATCAAAGAGAAGTTTCCAGACATTTCAAATGTGATCTTTACTAGTTAG

Coding sequence (CDS)

ATGGCTTCTTCCCTACCCTCAGCTGGATTGATGAACAACCCATCAATATCTTTCCCAAAAATCCAAGCCAACTCCAATAAATCTCCATCATTTGCTAATTTTGCTCAGAAAAGCCCCAAATTTCTGAAGTTGGTCAATCTGAAAAGGGTGATTAGAGCATCAGCAGCTTCAAATGGGTCTCCAGGGCTTTACTCTTCCAAGCAATTGGAGTTAACAGTGAAGAACGTTGACCTGGTTTTGGAAGATGTACGACCTTATCTCATTTCTGATGGTGGAAATGTTGATGTTGTGTCCGTTCAAGATGGAGTCATAACCCTTGAACTTCTAGGAGCATGTGAGAGTTGTCCGAGCTCAACCACCACCATGAAAATGGGCATTGAAAAAGTTCTGAAAGAGAAGTTTGGAGATGCAGTCAAGGATATTCGTCAAGTCAATGAAGTACAAGTGAATGAAACAACCGTTGAGGCGGTGAACAATCATCTAGATATACTTAGACCTGCTATCAGAAACTACGGTGGAGAGGTAGAAGTTTTAGCCATCGAGGGTGCGGATTGCACGGTTAGATATGGAGGACCAGAGACCATTGGCTCAGGAATAAAAGCAGCTATCAAAGAGAAGTTTCCAGACATTTCAAATGTGATCTTTACTAGTTAG

Protein sequence

MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17668.1Spo17668.1mRNA


Homology
BLAST of Spo17668.1 vs. NCBI nr
Match: gi|902223844|gb|KNA19617.1| (hypothetical protein SOVF_060140 [Spinacia oleracea])

HSP 1 Score: 418.7 bits (1075), Expect = 6.200e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1

		  

Query: 1   MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS 60
           MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS
Sbjct: 1   MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS 60

Query: 61  PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT 120
           PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT
Sbjct: 61  PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT 120

Query: 121 TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI 180
           TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI
Sbjct: 121 TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI 180

Query: 181 EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS
Sbjct: 181 EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 217

BLAST of Spo17668.1 vs. NCBI nr
Match: gi|731336836|ref|XP_010679470.1| (PREDICTED: nifU-like protein 1, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.2 bits (801), Expect = 3.700e-82
Identity = 168/219 (76.71%), Postives = 184/219 (84.02%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISF--PKIQANSNKSPSFANFAQKSPKFLKLVNLKR--VIRASAASN 62
           +S+ S GL+ NPSIS   PK      KSPSFA F  K+  F+K VN +R   I+AS  S 
Sbjct: 55  ASITSVGLVKNPSISISLPKNPEKFYKSPSFATFGVKNHNFVKWVNFQRGNCIKASV-SK 114

Query: 63  GSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSS 122
            S G+YSSKQ ELT KNVDLVLE+VRPYLISDGGNVDVVSVQDGVITL+L GACESCPSS
Sbjct: 115 ESTGIYSSKQFELTTKNVDLVLEEVRPYLISDGGNVDVVSVQDGVITLQLQGACESCPSS 174

Query: 123 TTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVL 182
           TTTMKMGIE+VLKEKFGDA+KDIRQV + QVNETTVE VN HLDILRPAI+NYGGEVEV+
Sbjct: 175 TTTMKMGIERVLKEKFGDAIKDIRQVIDEQVNETTVEVVNRHLDILRPAIKNYGGEVEVI 234

Query: 183 AIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           AIEG DCTVRYGGPETIGSGIKAAIKE+FPDISNVIFTS
Sbjct: 235 AIEGGDCTVRYGGPETIGSGIKAAIKERFPDISNVIFTS 272

BLAST of Spo17668.1 vs. NCBI nr
Match: gi|870858536|gb|KMT10045.1| (hypothetical protein BVRB_5g122570 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.2 bits (801), Expect = 3.700e-82
Identity = 168/219 (76.71%), Postives = 184/219 (84.02%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISF--PKIQANSNKSPSFANFAQKSPKFLKLVNLKR--VIRASAASN 62
           +S+ S GL+ NPSIS   PK      KSPSFA F  K+  F+K VN +R   I+AS  S 
Sbjct: 2   ASITSVGLVKNPSISISLPKNPEKFYKSPSFATFGVKNHNFVKWVNFQRGNCIKASV-SK 61

Query: 63  GSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSS 122
            S G+YSSKQ ELT KNVDLVLE+VRPYLISDGGNVDVVSVQDGVITL+L GACESCPSS
Sbjct: 62  ESTGIYSSKQFELTTKNVDLVLEEVRPYLISDGGNVDVVSVQDGVITLQLQGACESCPSS 121

Query: 123 TTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVL 182
           TTTMKMGIE+VLKEKFGDA+KDIRQV + QVNETTVE VN HLDILRPAI+NYGGEVEV+
Sbjct: 122 TTTMKMGIERVLKEKFGDAIKDIRQVIDEQVNETTVEVVNRHLDILRPAIKNYGGEVEVI 181

Query: 183 AIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           AIEG DCTVRYGGPETIGSGIKAAIKE+FPDISNVIFTS
Sbjct: 182 AIEGGDCTVRYGGPETIGSGIKAAIKERFPDISNVIFTS 219

BLAST of Spo17668.1 vs. NCBI nr
Match: gi|658065532|ref|XP_008368728.1| (PREDICTED: nifU-like protein 1, chloroplastic [Malus domestica])

HSP 1 Score: 266.2 bits (679), Expect = 5.200e-68
Identity = 143/219 (65.30%), Postives = 171/219 (78.08%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISFPKIQANSNKSPSFAN-----FAQKSPKFLKLVNLKRVIRASAAS 62
           +SL + G    P++S  KI  NS++ P F       F  K+P FLK   ++    ++AA 
Sbjct: 2   ASLAATGFHKAPTLS-SKIPPNSHRCPPFTCLKRHCFTAKTPIFLKTA-IRASNPSAAAE 61

Query: 63  NGSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPS 122
           + SPGLYS+KQ ELTV NVDLVLEDVRPYLISDGGNVDVVSV+DGV++L+L GAC SCPS
Sbjct: 62  SSSPGLYSAKQYELTVPNVDLVLEDVRPYLISDGGNVDVVSVEDGVVSLKLQGACGSCPS 121

Query: 123 STTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEV 182
           STTTMKMGIE+VLKEKFGDA+KDI+QV + +  E TVE VN HLDILRPAI+N+GG VEV
Sbjct: 122 STTTMKMGIERVLKEKFGDALKDIQQVFDEENKEITVEVVNRHLDILRPAIKNFGGSVEV 181

Query: 183 LAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFT 217
           L++EG DC V Y GPE+IGSGIKAAIKEKFPDI NV+FT
Sbjct: 182 LSVEGGDCHVNYVGPESIGSGIKAAIKEKFPDIVNVVFT 218

BLAST of Spo17668.1 vs. NCBI nr
Match: gi|658053583|ref|XP_008362545.1| (PREDICTED: nifU-like protein 1, chloroplastic [Malus domestica])

HSP 1 Score: 263.8 bits (673), Expect = 2.600e-67
Identity = 142/219 (64.84%), Postives = 170/219 (77.63%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISFPKIQANSNKSPSFAN-----FAQKSPKFLKLVNLKRVIRASAAS 62
           +SL + G    P++S  KI   S++ P F       F  K+P FLK   ++    ++AA 
Sbjct: 2   ASLAATGFPKAPTLS-SKIPPKSHQCPQFTCLKRHCFTAKTPIFLKTA-IRASNPSAAAE 61

Query: 63  NGSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPS 122
           + SPGLYS+KQ ELTV NVDLVLEDVRPYLISDGGNVDVVSV+DGV++L+L GAC SCPS
Sbjct: 62  SSSPGLYSAKQYELTVPNVDLVLEDVRPYLISDGGNVDVVSVEDGVVSLKLQGACGSCPS 121

Query: 123 STTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEV 182
           STTTMKMGIE+VLKEKFGDA+KDI+QV + +  E TVE VN HLDILRPAI+N+GG VEV
Sbjct: 122 STTTMKMGIERVLKEKFGDALKDIQQVFDEENKEITVEVVNRHLDILRPAIKNFGGSVEV 181

Query: 183 LAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFT 217
           L++EG DC V Y GPE+IGSGIKAAIKEKFPDI NV+FT
Sbjct: 182 LSVEGGDCHVNYVGPESIGSGIKAAIKEKFPDIVNVVFT 218

BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLC8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060140 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 4.300e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1

		  

Query: 1   MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS 60
           MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS
Sbjct: 1   MASSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNGS 60

Query: 61  PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT 120
           PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT
Sbjct: 61  PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT 120

Query: 121 TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI 180
           TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI
Sbjct: 121 TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI 180

Query: 181 EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS
Sbjct: 181 EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 217

BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C8N5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g122570 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.600e-82
Identity = 168/219 (76.71%), Postives = 184/219 (84.02%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISF--PKIQANSNKSPSFANFAQKSPKFLKLVNLKR--VIRASAASN 62
           +S+ S GL+ NPSIS   PK      KSPSFA F  K+  F+K VN +R   I+AS  S 
Sbjct: 2   ASITSVGLVKNPSISISLPKNPEKFYKSPSFATFGVKNHNFVKWVNFQRGNCIKASV-SK 61

Query: 63  GSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSS 122
            S G+YSSKQ ELT KNVDLVLE+VRPYLISDGGNVDVVSVQDGVITL+L GACESCPSS
Sbjct: 62  ESTGIYSSKQFELTTKNVDLVLEEVRPYLISDGGNVDVVSVQDGVITLQLQGACESCPSS 121

Query: 123 TTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVL 182
           TTTMKMGIE+VLKEKFGDA+KDIRQV + QVNETTVE VN HLDILRPAI+NYGGEVEV+
Sbjct: 122 TTTMKMGIERVLKEKFGDAIKDIRQVIDEQVNETTVEVVNRHLDILRPAIKNYGGEVEVI 181

Query: 183 AIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           AIEG DCTVRYGGPETIGSGIKAAIKE+FPDISNVIFTS
Sbjct: 182 AIEGGDCTVRYGGPETIGSGIKAAIKERFPDISNVIFTS 219

BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Match: D7U2L5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01820 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.000e-67
Identity = 141/216 (65.28%), Postives = 164/216 (75.93%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRAS--AASNGS 62
           +SL + GL  N +    K      K+           K L+ V  +  I+AS  +A +GS
Sbjct: 2   ASLTATGLSQNSAFRLSKTSVKPQKNQPIVRL-----KPLRTVLQRTAIKASNPSAPSGS 61

Query: 63  PGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTT 122
           PGLYS+ + ELT KNVDLVLEDVRPYLISDGGNVDVVSV+DGVI+L+L GAC SCPSSTT
Sbjct: 62  PGLYSAHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTT 121

Query: 123 TMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVLAI 182
           TM MGIE+VLKEKFGDAVKDIRQV + Q  ETTVEAVN HLDILRPAI+NYG  V+VL+I
Sbjct: 122 TMTMGIERVLKEKFGDAVKDIRQVYDEQTGETTVEAVNRHLDILRPAIKNYGSSVDVLSI 181

Query: 183 EGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFT 217
           EG DC V+Y GPE+IGSGIKAAIKEKFPDI NV+F+
Sbjct: 182 EGGDCLVKYTGPESIGSGIKAAIKEKFPDIVNVVFS 212

BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KB98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412870 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.000e-67
Identity = 138/220 (62.73%), Postives = 175/220 (79.55%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASAASNG--- 62
           +SL ++GL+  P +   +  ANS + P FA    + P  LK     R IRAS +++G   
Sbjct: 2   ASLTTSGLLKTP-LKNSQSPANSLQYPPFAYGQHQLPVSLKRAFPGRAIRASPSNSGPST 61

Query: 63  --SPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPS 122
             SPGLYS+++ ELT+ NVDLVLEDVRPYLI+DGGNVDVVSV+DGV++L+L+GAC SCPS
Sbjct: 62  TSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGACGSCPS 121

Query: 123 STTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEV 182
           STTTMKMGIE+VLKEKFGD+VK+I QV + +  ETT EAVN+HLDILRPAIRNYGG VEV
Sbjct: 122 STTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVEV 181

Query: 183 LAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           ++I G DC V+Y GPE+IG+G+KAAIKE+FPDI+NV+F+S
Sbjct: 182 ISINGGDCLVKYEGPESIGTGVKAAIKERFPDITNVVFSS 220

BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Match: A0A140B480_PRUPE (NFU domain protein 1 OS=Prunus persica var. persica GN=NFU1 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.800e-67
Identity = 141/218 (64.68%), Postives = 169/218 (77.52%), Query Frame = 1

		  

Query: 3   SSLPSAGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRAS----AASN 62
           +SL + GL   P+  F KI A S++ P      +        + +K  IRAS    AA +
Sbjct: 2   ASLTATGLPKTPT-PFSKIPATSHQYPQSVFVQRHRLTSQGSIFVKSAIRASNPSAAAES 61

Query: 63  GSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSS 122
            SPGLYS+K+ ELTV NVDLVLEDVRPYLI+DGGNVDVVSV+DGV++L+L GAC SCPSS
Sbjct: 62  SSPGLYSAKKYELTVPNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLQGACGSCPSS 121

Query: 123 TTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNYGGEVEVL 182
           TTTMKMGIE+VLKEKFGDA+KDI+QV + +  ETTVEAVN HLDILRPAI+N+GG VEVL
Sbjct: 122 TTTMKMGIERVLKEKFGDALKDIQQVYDEENKETTVEAVNGHLDILRPAIKNFGGSVEVL 181

Query: 183 AIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFT 217
           ++EG DC V Y GP++IGSGIKAAIKEKFPDI NV+FT
Sbjct: 182 SVEGGDCHVNYVGPDSIGSGIKAAIKEKFPDIVNVVFT 218

BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.200e-63
Identity = 133/229 (58.08%), Postives = 164/229 (71.62%), Query Frame = 1

		  

Query: 8   AGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASA------------ 67
           A L  + S SF  +  +S+    F   + ++P F+   N +R I  +A            
Sbjct: 3   ASLATSISGSFRILVKSSSTRNGFPVISDQNPSFVLFANKRRHISRTAIFHRSAISGSSQ 62

Query: 68  -------ASNGSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLEL 127
                  AS  S GLYS++  +LT +NVDLVLEDVRP+LISDGGNVDVVSV+DGV++L+L
Sbjct: 63  GEKISPLASGVSSGLYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKL 122

Query: 128 LGACESCPSSTTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAI 187
            GAC SCPSS+TTM MGIE+VLKEKFGDA+KDIRQV + +V + TVEAVN HLDILRPAI
Sbjct: 123 QGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAI 182

Query: 188 RNYGGEVEVLAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           +NYGG VEVL++EG DC V+Y GPE+IG GI+AAIKEKF DISNV FTS
Sbjct: 183 KNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFTS 231

BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.900e-19
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 1

		  

Query: 68  QLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIE 127
           ++ LT +NV+ VL+++RPYL+SDGGNV +  +   ++ ++L GAC SCPSST TMKMGIE
Sbjct: 82  EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIE 141

Query: 128 KVLKEKFGDAVKDIRQVNE---VQVNETTVEAVNNHLDILRP-AIRNYGGEVEVLAIEGA 187
           + L EK  + V      +E   +++NE  +E V   L+ +RP  I    G ++++ IE  
Sbjct: 142 RRLMEKIPEIVAVEALPDEETGLELNEENIEKV---LEEIRPYLIGTADGSLDLVEIEDP 201

Query: 188 DCTVRYGGPE----TIGSGIKAAIKEKFPDISNV 214
              +R  GP     T+   +   ++EK P I+ V
Sbjct: 202 IVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAV 232

BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.900e-18
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 1

		  

Query: 68  QLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIE 127
           QL LT  NV+ VL+ VRPYL +DGG+V +  +   V+ L+L GAC SCPSS  T+K GIE
Sbjct: 72  QLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIE 131

Query: 128 KVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAIRNY-----GGEVEVLAIEG 187
           + L EK    + D+  V  V   ET +E    +++ +   IR Y     GG ++ L I+G
Sbjct: 132 RRLMEK----IPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKG 191

Query: 188 ADCTVRYGGP----ETIGSGIKAAIKEKFPDISNV 214
               VR  GP     T+   +   ++EK P I  V
Sbjct: 192 PIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIV 222

BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.700e-16
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 1

		  

Query: 69  LELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIEK 128
           + LT +NV+ VL++VRP L++DGGNV +  +   V+ L+L GAC SCPSS+ T+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 129 VLKEKFGDAVKDIRQVNE-----VQVNETTVEAVNNHLDILRPAIRNY-GGEVEVLAIEG 188
            L++K  + +  + Q  E     +++N+  +E V   L  LRP +    GG +E++ I+G
Sbjct: 142 RLRDKIPE-IMSVEQFLESETGGLELNDENIEKV---LSELRPYLSGTGGGGLELVEIDG 201

Query: 189 ADCTVRYGGPE----TIGSGIKAAIKEKFPDISNV 214
               VR  GP     T+   +   ++E  P I  V
Sbjct: 202 YVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAV 232

BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yutI PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.400e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1

		  

Query: 74  KNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIEKVLKEK 133
           + V  VL+ +RP+L+ DGG+ ++V V +G++ L LLGAC SCPSST T+K GIE+ L E+
Sbjct: 41  EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 100

Query: 134 FGDAVKDIRQV 145
               V ++ QV
Sbjct: 101 V-PGVVEVEQV 110

BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Match: AT4G01940.1 (NFU domain protein 1)

HSP 1 Score: 243.4 bits (620), Expect = 1.300e-64
Identity = 133/229 (58.08%), Postives = 164/229 (71.62%), Query Frame = 1

		  

Query: 8   AGLMNNPSISFPKIQANSNKSPSFANFAQKSPKFLKLVNLKRVIRASA------------ 67
           A L  + S SF  +  +S+    F   + ++P F+   N +R I  +A            
Sbjct: 3   ASLATSISGSFRILVKSSSTRNGFPVISDQNPSFVLFANKRRHISRTAIFHRSAISGSSQ 62

Query: 68  -------ASNGSPGLYSSKQLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLEL 127
                  AS  S GLYS++  +LT +NVDLVLEDVRP+LISDGGNVDVVSV+DGV++L+L
Sbjct: 63  GEKISPLASGVSSGLYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKL 122

Query: 128 LGACESCPSSTTTMKMGIEKVLKEKFGDAVKDIRQVNEVQVNETTVEAVNNHLDILRPAI 187
            GAC SCPSS+TTM MGIE+VLKEKFGDA+KDIRQV + +V + TVEAVN HLDILRPAI
Sbjct: 123 QGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAI 182

Query: 188 RNYGGEVEVLAIEGADCTVRYGGPETIGSGIKAAIKEKFPDISNVIFTS 218
           +NYGG VEVL++EG DC V+Y GPE+IG GI+AAIKEKF DISNV FTS
Sbjct: 183 KNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFTS 231

BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Match: AT5G49940.1 (NIFU-like protein 2)

HSP 1 Score: 95.1 bits (235), Expect = 5.600e-20
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 1

		  

Query: 68  QLELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIE 127
           ++ LT +NV+ VL+++RPYL+SDGGNV +  +   ++ ++L GAC SCPSST TMKMGIE
Sbjct: 82  EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIE 141

Query: 128 KVLKEKFGDAVKDIRQVNE---VQVNETTVEAVNNHLDILRP-AIRNYGGEVEVLAIEGA 187
           + L EK  + V      +E   +++NE  +E V   L+ +RP  I    G ++++ IE  
Sbjct: 142 RRLMEKIPEIVAVEALPDEETGLELNEENIEKV---LEEIRPYLIGTADGSLDLVEIEDP 201

Query: 188 DCTVRYGGPE----TIGSGIKAAIKEKFPDISNV 214
              +R  GP     T+   +   ++EK P I+ V
Sbjct: 202 IVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAV 232

BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Match: AT4G25910.1 (NFU domain protein 3)

HSP 1 Score: 87.0 bits (214), Expect = 1.500e-17
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 1

		  

Query: 69  LELTVKNVDLVLEDVRPYLISDGGNVDVVSVQDGVITLELLGACESCPSSTTTMKMGIEK 128
           + LT +NV+ VL++VRP L++DGGNV +  +   V+ L+L GAC SCPSS+ T+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 129 VLKEKFGDAVKDIRQVNE-----VQVNETTVEAVNNHLDILRPAIRNY-GGEVEVLAIEG 188
            L++K  + +  + Q  E     +++N+  +E V   L  LRP +    GG +E++ I+G
Sbjct: 142 RLRDKIPE-IMSVEQFLESETGGLELNDENIEKV---LSELRPYLSGTGGGGLELVEIDG 201

Query: 189 ADCTVRYGGPE----TIGSGIKAAIKEKFPDISNV 214
               VR  GP     T+   +   ++E  P I  V
Sbjct: 202 YVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAV 232

BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Match: AT3G20970.1 (NFU domain protein 4)

HSP 1 Score: 48.1 bits (113), Expect = 7.800e-6
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 1

		  

Query: 72  TVKNVDLVLED-VRPYLISDGGNVDVVSV--QDGVITLELLGACESCPSSTTTMKMGIEK 131
           TV  +  +LE  +RP +  DGG+++      + G++ L + GAC  CPSS+ T+K GIE 
Sbjct: 192 TVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIEN 251

Query: 132 VLKEKFGDAVKDIRQVNEVQVNETTV 155
           +L   +   VK + Q  + +  E T+
Sbjct: 252 MLMH-YVSEVKGVEQEFDGEDEEGTL 276

BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Match: AT1G51390.1 (NFU domain protein 5)

HSP 1 Score: 48.1 bits (113), Expect = 7.800e-6
Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 1

		  

Query: 72  TVKNVDLVLED-VRPYLISDGGNVDVVS--VQDGVITLELLGACESCPSSTTTMKMGIEK 131
           TV  +  +LE  +RP +  DGG+++      + G++ L + GAC  CPSS+ T+K GIE 
Sbjct: 187 TVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIEN 246

Query: 132 VLKEKFGDAVKDIRQ 144
           +L   +   VK + Q
Sbjct: 247 MLMH-YVSEVKGVEQ 260

The following BLAST results are available for this feature:
BLAST of Spo17668.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902223844|gb|KNA19617.1|6.2e-114100.hypothetical protein SOVF_0601... [more]
gi|731336836|ref|XP_010679470.1|3.7e-8276.7PREDICTED: nifU-like protein 1... [more]
gi|870858536|gb|KMT10045.1|3.7e-8276.7hypothetical protein BVRB_5g12... [more]
gi|658065532|ref|XP_008368728.1|5.2e-6865.3PREDICTED: nifU-like protein 1... [more]
gi|658053583|ref|XP_008362545.1|2.6e-6764.8PREDICTED: nifU-like protein 1... [more]
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BLAST of Spo17668.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RLC8_SPIOL4.3e-114100.Uncharacterized protein OS=Spi... [more]
A0A0J8C8N5_BETVU2.6e-8276.7Uncharacterized protein OS=Bet... [more]
D7U2L5_VITVI3.0e-6765.2Putative uncharacterized prote... [more]
A0A0A0KB98_CUCSA3.0e-6762.7Uncharacterized protein OS=Cuc... [more]
A0A140B480_PRUPE6.8e-6764.6NFU domain protein 1 OS=Prunus... [more]
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BLAST of Spo17668.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NIFU1_ARATH2.2e-6358.0NifU-like protein 1, chloropla... [more]
NIFU2_ARATH9.9e-1937.6NifU-like protein 2, chloropla... [more]
NIFU1_ORYSJ4.9e-1838.7NifU-like protein 1, chloropla... [more]
NIFU3_ARATH2.7e-1636.7NifU-like protein 3, chloropla... [more]
YUTI_BACSU4.4e-1147.8Putative nitrogen fixation pro... [more]
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BLAST of Spo17668.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G01940.11.3e-6458.0NFU domain protein 1[more]
AT5G49940.15.6e-2037.6NIFU-like protein 2[more]
AT4G25910.11.5e-1736.7NFU domain protein 3[more]
AT3G20970.17.8e-633.7NFU domain protein 4[more]
AT1G51390.17.8e-636.0NFU domain protein 5[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPRODOMPD002830coord: 80..132
score: 6.0
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 77..136
score: 4.7E-22coord: 158..213
score: 2.
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 50..208
score: 1.3
NoneNo IPR availableunknownSSF117916Fe-S cluster assembly (FSCA) domain-likecoord: 152..215
score: 7.85E-9coord: 72..138
score: 9.16

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0035265 organ growth
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009853 photorespiration
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006007 glucose catabolic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0010007 magnesium chelatase complex
molecular_function GO:0046422 violaxanthin de-epoxidase activity
molecular_function GO:0016851 magnesium chelatase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005504 fatty acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0045430 chalcone isomerase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression