Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAATGAGGTCAGCAGTCAGCTCAATAAGGGTTGGTTTGTTTGGTGTATCAGTACTCTCACGCTCTTCGTATTCTCCGTCCCTTCCCTGCTATTTTAACCCCCTTTCCCTTCTCCTCCTCTACCCCATCTCTCTCTGCCACATTCATTCTCACTCACTTTCTCTCTCCGCTTCTTCAATGGCTTCCATCACTGGATCATCCGTCTCCTTCAAGTGCGCCCCTCTTCAGTCCTCGGTATAATACTTTCTTCCTTTTTTTTCAAATTTATTTTTATTGCTTGATCTGCAATTTGGATATGCCCTTTTGTTGATCTATTGCTGTGATTTCTACGCATTGAGATTGTTTTTTGTTCATCTCTTTTTCTGGGAGGGGTTTGTGGGTGGTGGTGATGGTTGATTTCTACGCATTATAGTGAATAATGTTGATTATCAAGTTTCAATCTATATTGTACTTGCTTTGTTGAATTAATTATTTGATGCATGCCTGTGACTATTTGTCGTTTCGTTATGTTATGAATTTGAATTTTATTTGATAAAGGGTTTTTTGTGGGTGGTGGTGATGGTTGATTTCGTGTTCGATTTGATATAAATTTATGGTGTTTCAGGCGAGATAAATCTAACAAGATCACACTTTGATAATATTTTATTATTAATTTTGACCTTGGAAAAGTCAACTGGGGTTTTGTGATTTGGTTTGATCAGCTTAATTATAGTAATAATGTTGATTATCAAGTTTCAATCTATACTGTACTTGCTTTGTTGAATTACTTACTTGGATGCATGAGTGTGACTATTTGTCGTTTTGTTTTGAATTTGAATTTTATTTGATAAAGGGTTTTATATGGGTTTTAAAATTGGAGTTTTAATCGGATGAAATTGATCAACATTGTTGAATTTTCAGTTTGCGGCATTGTTTTTGTGGACGTTTTGGACTTTAAGTTTGACAGTCTTGTCTTTTAAGGGCAAAATAGAAAGTTTTAGGGAAGATCTGCCCTTAATAAATCAATCTAATGCAGATGAGTAGATTCGTTTAAATTTCGATAAGGTCATGATGATTCAAGGATAGTAACTATGATCTTAATGTCGTTTTAATTTTGTTAGTTGATTATGTGATACTTCTTCTTTTCGAGGTCTGTGATGTATGGATGACTTAGTACTTGGTATTGTTGAGTGTAGCTACTTTCACATAGCACAATCATCTCTTTGTCGCGCTATGCAGTTTCATTGCCTTGTGAGTTTTGTCCTGCCTTTTTTCCATGGATTTTAACCCCTTGAAAATGTACATAAACGAATTTATCTGTAGTTGCTTTGTGAGTGCTTGATCGGTTCCTTTGCATGTCGAGGAAGTCTTAGCCTCAAGTGGCTTGTGTCCACGCGAAAACAAGGGAGTACCAATACAAAATATTGAGTACCAATACAGAATATATTAGTACTAATAACACAAAATGACTTGTATTGGTACTTCTTAGCAATTTTGCGTTTTTGGTACCGACATATTATGTATTGCCATTATAGGTTTAGAAATCCTCTTTGCATGTCACTTCCAAGTTCTACTTTTGCTGCTTTTTATTGGAATTACTATACGGGTTCGATCTTCGGAGCAAATTAGTCCGTTGTTTTTGCTAGATCGTTTCCTTTGCATGTCACTTCCCAAGTTTTACTTTTACTGTTTCTTATTGGAATTACTACACGGGTTTAATCTTCGGAGCCAGTTGTTACTAGATTGGTTCCTTTGCACGTTTGCATGTCACTTCTCAAGTTTTATTTTTTCAGAGCAAATTGTTCTGTTGTTGCATTTCTGGTACTTAAATGATCTTTAAAGTTGTCTATGAACTCATGCTCTTGTATTTTATTTCTTTGACAGTTTCACTCCAAGAACTATGCGCTGAAGTTGTCAGTGTCATGGAGGAGAACTCCAGTGATGCCACGTGGCCTAAGTGTCTCTTGCGCTGTAAGTACCTATTCTTCCTCAGTTTAATCCTGGTTTCCTTTTCTTCTTTGTGCTTTTGAAGTGTGGTTTTCCCGGTTTTTTTTGTTAAATGTATTACTCGCATAATATATGAAGGATACTGTACGAAAATTAAAGTATTGACAGTTTTGTTTGGCTGTCATAAACCATATGAAGATGAGATGTGTTGCTACCTGGATCATTTCATCATTATTATGCTTCAATGGCCAAAAATTCTTGTATGTTATCTTTTATTTTAAGCTAATATTCTGCATTTGGCGTTGTTGAGCAGGCCAAGCCCGAGATGGTAACAAAGGTCAGTGATATAGTGAAAAGTCAGCTTGCTTTGGCAGAGGATGCTAAAGTTACCGGTGAAACAAAATTTTCAGAAATTGGAGCCGATTCTCTTGACACAGTAAGTTGCCTCAGTTACAGCTTTTACTGTTATTGCATCAATACTCAACACTGCATGCTTGATCTGTGCACTATTGGCTCTTTAGTTCATACATGCTTCTGAGTTCTGAAGAACCCGAGTCACATAAGTCGTGGTAGCATCTGTGAACCTGACGGTGATAGACACTTAGGGGATGTTTGGTATGTAAATTTTTAGAGTGGGAAACGGATTCAGATAACCGTTCACTTTATACAGTAAGTTGTTTGGTTTGGAGTATGCGGTAACTGTTACTGTTGGGGTAATTTATTCCCCTACTCTGTTACTGCTCTTAAAGTCCACGGTAACAATTACAGTTTCCCCTCAAACAGCGATTGCACTGCCTCCTTTCTCTCTCCCTTTCCTTCTTCTTTCTCCCTTCCCCCCTCTCTTCTTTGAGCAATTGAGCTTACTCCCAAATTCAATTGAATCTCCCAAGATTTCAACGTTTCTGTAAATTTCTACTTATATTTTTCTCATAATTTATGAATTTTGTTCTTTCAATCTAATTTTCGAATTTAATAAACCGTAATTTTTAATTTGGCCCTTGTGCTTCAACTATGTTCTTATTTCATCGATATTTTTCTGGTCTTTGGTTATTATTGGTGTTTTTGTTAATGTTAACTGGTTATTATTGGTGTTTTTGTTCATGTATTGTTGAATTTTAAGTGAAATTTCATTATTTTATTGGGAAATAGTTAACATTACCCTTTTCCCTTCTTATTTGTTTCCATTCCACTCCCTTTCCAACCTTCATATCAAACACCCGCTTAGTTGTCTTCCCTCCTTAGTTCAATGTGCTAGGGAAGTGATCAATAGATGGTCATTCTGAAAATGCTTTTCCTTCACACTTCCATGTAAAAAATTAAGTTCAATTAGTTTGGTCTTGATCAATTTTACTGGCATCGCATTATAAGTCATGATAATTAATAATTAATAATTTATTTGACAGGTTGAGATTGTGATGAAGCTCGAGGAGGAATTTGGGGTTACCGTTGAGGAAGAGAATGCTCAAACCATTACAACTATTCAAGAAGCGGCAGACATGATCGAGGCACTTCAACAAAACAAGTAGATTATAGGTTTCTCATCCATGGATGGGAAATGAGCACTTGAAATTTTTCTAATCTGTTTTCTTTTAGATTTAGACGTTGTCTTGTATGTTTAGTGGTATTCAGCATATATATACTCCTATCTTATATACATATGGAGTATAAGATGAATGAAAATCCTAATATTCATGAAAATGCACCATTGTTGAAGGTTTGAGGCTCAACTTTCTATTTATCACATAACCATTTTGTTATTACATTATAACTATAGCAATATCACATAATCGCGTATATATGAGGATGTTATATATATA ATGATAATGAGGTCAGCAGTCAGCTCAATAAGGGTTGGTTTGTTTGGTGTATCAGTACTCTCACGCTCTTCGTATTCTCCGTCCCTTCCCTGCTATTTTAACCCCCTTTCCCTTCTCCTCCTCTACCCCATCTCTCTCTGCCACATTCATTCTCACTCACTTTCTCTCTCCGCTTCTTCAATGGCTTCCATCACTGGATCATCCGTCTCCTTCAAGTGCGCCCCTCTTCAGTCCTCGTTTCACTCCAAGAACTATGCGCTGAAGTTGTCAGTGTCATGGAGGAGAACTCCAGTGATGCCACGTGGCCTAAGTGTCTCTTGCGCTGCCAAGCCCGAGATGGTAACAAAGGTCAGTGATATAGTGAAAAGTCAGCTTGCTTTGGCAGAGGATGCTAAAGTTACCGGTGAAACAAAATTTTCAGAAATTGGAGCCGATTCTCTTGACACAGTTGAGATTGTGATGAAGCTCGAGGAGGAATTTGGGGTTACCGTTGAGGAAGAGAATGCTCAAACCATTACAACTATTCAAGAAGCGGCAGACATGATCGAGGCACTTCAACAAAACAAGTAGATTATAGGTTTCTCATCCATGGATGGGAAATGAGCACTTGAAATTTTTCTAATCTGTTTTCTTTTAGATTTAGACGTTGTCTTGTATGTTTAGTGGTATTCAGCATATATATACTCCTATCTTATATACATATGGAGTATAAGATGAATGAAAATCCTAATATTCATGAAAATGCACCATTGTTGAAGGTTTGAGGCTCAACTTTCTATTTATCACATAACCATTTTGTTATTACATTATAACTATAGCAATATCACATAATCGCGTATATATGAGGATGTTATATATATA ATGATAATGAGGTCAGCAGTCAGCTCAATAAGGGTTGGTTTGTTTGGTGTATCAGTACTCTCACGCTCTTCGTATTCTCCGTCCCTTCCCTGCTATTTTAACCCCCTTTCCCTTCTCCTCCTCTACCCCATCTCTCTCTGCCACATTCATTCTCACTCACTTTCTCTCTCCGCTTCTTCAATGGCTTCCATCACTGGATCATCCGTCTCCTTCAAGTGCGCCCCTCTTCAGTCCTCGTTTCACTCCAAGAACTATGCGCTGAAGTTGTCAGTGTCATGGAGGAGAACTCCAGTGATGCCACGTGGCCTAAGTGTCTCTTGCGCTGCCAAGCCCGAGATGGTAACAAAGGTCAGTGATATAGTGAAAAGTCAGCTTGCTTTGGCAGAGGATGCTAAAGTTACCGGTGAAACAAAATTTTCAGAAATTGGAGCCGATTCTCTTGACACAGTTGAGATTGTGATGAAGCTCGAGGAGGAATTTGGGGTTACCGTTGAGGAAGAGAATGCTCAAACCATTACAACTATTCAAGAAGCGGCAGACATGATCGAGGCACTTCAACAAAACAAGTAG MIMRSAVSSIRVGLFGVSVLSRSSYSPSLPCYFNPLSLLLLYPISLCHIHSHSLSLSASSMASITGSSVSFKCAPLQSSFHSKNYALKLSVSWRRTPVMPRGLSVSCAAKPEMVTKVSDIVKSQLALAEDAKVTGETKFSEIGADSLDTVEIVMKLEEEFGVTVEEENAQTITTIQEAADMIEALQQNK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17679.1 vs. NCBI nr
Match: gi|113170|sp|P23235.1|ACP2_SPIOL (RecName: Full=Acyl carrier protein 2, chloroplastic; AltName: Full=Acyl carrier protein II; Short=ACP II; Flags: Precursor) HSP 1 Score: 228.4 bits (581), Expect = 1.000e-56 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 1
BLAST of Spo17679.1 vs. NCBI nr
Match: gi|756179880|gb|AJK93575.1| (acyl carrier protein [Suaeda glauca]) HSP 1 Score: 164.1 bits (414), Expect = 2.400e-37 Identity = 98/131 (74.81%), Postives = 110/131 (83.97%), Query Frame = 1
BLAST of Spo17679.1 vs. NCBI nr
Match: gi|731328258|ref|XP_010674947.1| (PREDICTED: acyl carrier protein 2, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 159.1 bits (401), Expect = 7.700e-36 Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 1
BLAST of Spo17679.1 vs. NCBI nr
Match: gi|16518983|gb|AAL25091.1|AF428256_1 (acyl carrier protein [Olea europaea]) HSP 1 Score: 129.0 bits (323), Expect = 8.600e-27 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1
BLAST of Spo17679.1 vs. NCBI nr
Match: gi|656463063|gb|AID16785.1| (acyl carrier protein 2 [Olea europaea]) HSP 1 Score: 128.3 bits (321), Expect = 1.500e-26 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBF2_SPIOL (Acyl carrier protein OS=Spinacia oleracea GN=SOVF_085120 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.200e-57 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 1
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AZ91_9CARY (Acyl carrier protein OS=Suaeda glauca PE=2 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.700e-37 Identity = 98/131 (74.81%), Postives = 110/131 (83.97%), Query Frame = 1
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIY3_BETVU (Acyl carrier protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082920 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 5.400e-36 Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 1
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Match: Q944N0_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 6.000e-27 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Match: A0A068CBK1_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP2 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.000e-26 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Match: ACP2_SPIOL (Acyl carrier protein 2, chloroplastic OS=Spinacia oleracea GN=ACL1.2 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.500e-59 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 1
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Match: ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.400e-24 Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Match: ACP5_ARATH (Acyl carrier protein 5, chloroplastic OS=Arabidopsis thaliana GN=ACP5 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.200e-24 Identity = 71/137 (51.82%), Postives = 91/137 (66.42%), Query Frame = 1
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 8.900e-24 Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = 1
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.500e-23 Identity = 73/138 (52.90%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Match: AT5G27200.1 (acyl carrier protein 5) HSP 1 Score: 112.5 bits (280), Expect = 2.900e-25 Identity = 71/137 (51.82%), Postives = 91/137 (66.42%), Query Frame = 1
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Match: AT4G25050.2 (acyl carrier protein 4) HSP 1 Score: 105.5 bits (262), Expect = 3.600e-23 Identity = 72/143 (50.35%), Postives = 90/143 (62.94%), Query Frame = 1
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Match: AT3G05020.1 (acyl carrier protein 1) HSP 1 Score: 102.8 bits (255), Expect = 2.300e-22 Identity = 68/139 (48.92%), Postives = 89/139 (64.03%), Query Frame = 1
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Match: AT1G54580.1 (acyl carrier protein 2) HSP 1 Score: 96.3 bits (238), Expect = 2.200e-20 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 1
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Match: AT1G54630.1 (acyl carrier protein 3) HSP 1 Score: 95.1 bits (235), Expect = 4.800e-20 Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17679.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17679.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17679.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17679.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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