Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATTAAAAAAAAAAAAAAAAACTTTATAAAAGAGTTGAAAAACACAACACTATATCCCTCCCTCTGCATCATCATATCATACTTATATCGTCGCCATTTCTATTCTCAAACTCAAGCTTTTTTCGCCTTCTCTATCTTTTCTCTTTACTTGCCGTATTTTCTCCCTCCTCCCTCAAAAAATCCTTTATTTTATCCTCGTAAACTGAGATTTGCTACAAACTAAGAATTCAAGCACTCAATTTCTGTCAAATTTGTAAAAAATGTTCAAGGGGAGAAGATTGTTTCAACCTGTATGAAATCGACTCGATTCGTACTCTTGCCAAATTGTGCTATTGTTGAAGATCCACTGTTAAGAAGCTTCGTTTTCTGTCGCGTTTGATTCATGATGTAATGCATCCAGTTTTTCCGGCTGCCTCAAATTCTTAATTTTTAATTTTTTTTTTTCGTTTGTCATTGGCTGTAGTAAGACTCTGGTAGTCTAAAAGATCTGTCAAACTTTTGATGTTAAAAAATAAGAAAATTATGAATGAGAAATCTCTGGTGTGTTTTTCATGGATTTTCCTTTCATATAATTACAATTCGAAACTCATTTGTTTATGTAATTGGCTTGAAATACGAAACTAGAGCTAATCAAATTGCTCAAACTTTCCGATTTTTCACTGTCAAAATTTCTGAATTTGTCATAGTATTAAGCAGTTTGTTTCTTATTGTACTCAGTTGGCGATTCTTAGATCAATTCTAAGCATACAGAACGATAAAATTAGAAATTCTGGGTGAAAATTTTTCAACGAAAATGGTTGAATTTACTGTATAATTTCATTGTTTGTTGCAATATTTCTAAGTAGATCTTATCGTTTCGCCGGATCTTAGAAGATTATCTTATTGAAATCATCTGCGTTTTTTTACAGGTACCAGACAATTAGCCCGGATAATTTAGGTTCAAGTAGCGTTAGAAAACCAAACACAAACAATTTCAAATCAAGCAAAGAAGATCATCATCAAAACGGCGGCGAAAACGGGCGAATAGCAGGAAGCAGCAGTGCAGCAAATGTTACTCCGGCCACCACAACAACAATAACAAGTTTTGATGGGAACGGATTGATGCATAAATCTCCTCCTCGAAATCCGCATCCACAACAACAACAACAAGACAACCATCATCACCACCTTCATCATTCCGCCTCCAGTTCTTCTGCGGTTCATCAAAACCATGAAAGCAGCAGCGCGTGCGGCGGCGGCGGAAGCAGTGGTGATATGCTGCTACAATGGGGTCAAAATAAGAGATCGAGGTGTTCAAGAACCGAAGGTCGCTCCATGGTCAGTGTTGTCTTGGAGAAGCATCACTCAAGTAATAATAATCATATAATGCCACCACCACATCCACATCCACTTCCACTTCAAAATCCTAACCCTTCGTCTTTGCCGTCCACTTCTGGTAATAATGGTACTAGAACTGGAGTTTCTACCAGAGTTCGACCACATGGTTCGTGTACCCCTTCCTTCACCAAGAACAGGTATTCAACCTTTCTGTTAACATTTAAATTTGAATTTAAAGTAAAAAAAATTATGGGTTTTTTCTTTGTTCATTTTTTTTCTTCTAGATCTAAAGAAATTGTTTTGTTGGAGGAGATGATGATTTAATGACGAATATACCCTCTTAAAGAAGAAGAATTGTGTTGTAGTCTTTTCTCCTTTTTGATGATGATGTGGTTGGTTGTAGGTTTGTGGGTAATCGGGTATATTAATAATCCGTATGTATATAAAATAAATGGAGTAATAATGAGTTCAAAAATAAAAAACAAAAGTTTGGTCTGATAATAATTTTCCAAATTTCCAGCTATATATGGTGATTTTCCCTGTTGTCAGCAATTGAAGGAGAAGGGTAGGGCGTGAATGGGGTGATGTATTCATTCTAGTACTTGTATTTCTTTAGTTTTTATTTTTGTTTATACCCTTTTTAACCTTCTCCCCTCCCATGTGGATAAAAAAAAGAAAACAAAAGACACTAATCCTAATCTTAATCAGAGTATGTTTTTGCTTTCGTTAGATAGATATATATTTATATAAGTACAAAACCTCTCCTTTTTTTTTTAGTTATTTTTGCAAGCCCAACTCTAAACAAATTGTGGTGTGAATTTCATTGTTGTGATGCATAGGAACTTGGTTGATCAAATGGGTACAAATAGCGCGTCCCCGTCGAGAAATGGTGGGGTAAGCAGTAGTAGTAGCCGTCTGGTTTCTAGATCTACGGTGGTGGGGAAGCGATCCCCATCTTGTATAGAGAAGAATGATAAGAAAGTTGGGGTAATTAGGAAAGTGAAATCAGATGATTCTTTAGCGCCTCCTCCTACTAGCAATGGAATTAATCATGTTGAGCACGAGCACGGTGGTGGTGCCGCCGCGATGGTCCGTTCTCCGGTGACGGATGCCGAGAAGGGCGGTGGTAGTGAAGTGGTTGAATGGCCAAGGATATTCCTTTCACTTTCAAGGAAGGAAAAGGAAGATGATTTTTATGCAATGAAGGGTACTAAATTACCGCATAGACCCAAAAAGAGGCCCAAGGCTGTTGAAAGAGGCCTTCAGGTAATTCAATTGAATTAATAATAAATTGAATTAATAATTTAATTCATATTGAATTTTATAAAATTTTAGACATTTTAATTTAATTTATTTGTTTTTGGTGGGTTCAGTATTGTTTTCCAGGTGTTTGGCTCTCAGATTTGACGAGGGCAAGATATGAAGTTAGAGAAAGGAAGAGTACCAAGAAGGTAACATTGTGTTTTTTTTTATTTTTTTATTTTTTATTTTAAGTTTACAATGCGCTGCTTGTTTGTTTAATACACCCGTGAATTGAGGGTAGTGACCTGATCATTATTATTCATTACTGCATTTTTTGAAAATCAACTAAGTTTAGAGTTCGGGATTGTTGGAATTGAAGATAATCCTTTAGTTAGATCCGGAGGATGCAAAATATGAAATACTTAGTACAAAATACGTACTTTCTTTATCCGGGCAACTGTTTTACTTGTTTCTGATTAGATTACACAATCGAATTTCGGACACTATTCAAACAAATTCTTTTGACTTTCTTTTGTCATTTATACTTTTAAAAAAAACATAGACGTGCAGGGTATTATCAGATTCGTCTCTATAAATATTTTTTAAAAATCAACTTTTTATAATTTTGCCTTATCCATAATTGACGATATTAATGTTCAAAATCGTGCAATGAGAAATATGTATATGACAGATATTAATGTTCAAAATCGTGCAATGAGAAAGATGTCTAAATAATTGTGTACCCTGAAAAAGAACAGGGGAAATATGTAGTTTAATACTGATAGATTAAATAGAGCTCCATATATTTAAAAAGTAACGAGAAACTATATTTAAATAGAAAAAGAAAACAATTATTGTTGAGATATTATTCTTTTGAGGGTAGTTCGAGATTTGTTGAAACGCATATGGACATTATGATCTCATAACTTAAGTTGATTAAAAAAATGGTCTACTTTTAGAAAAAGAATTTTTTGTAATTGTATGTTAATAAGCAAAGGCGTAAGTTTCATAAAGTACGGACTACGGTCTACGGAGTATGATTTTTAGTACGGTCTACGGAGTATGATTTTATTTTATGTTTCACTCAAAAGGGGTAGTTATGATGTCACTCTTTTTCATTCTATTAATGAAAATTTAACTAATTACTTATCTCTTATATTTGATAAACAAACTACTCTGTTAAAACCGTGTGCCGTAGTAATCAATGAGGAAAAAGAGCACACTTTGTAATGTAGAATTTGTTGGAATAGTGCATACATAACGTCATACTTCCAACTTTGGATAAAAAACTGATTTAAGGTTCAACAATCAACATTGAAATACTGAAATGTGATTATTTATTCTAGTCGGAGGTTTATATAGAGTATAGTCGTCGTTTTTACTTGGTATTCTCATGAACTCCTGCTTAACTTACACAGTTTTTACTTCCGTATAATGAACTCAAAATTCACAACCCCTTGTTAGTTGTTATGAACCAAATTTCAAACTTTTGCCAATACTTTCTCTATCGTTGACTAAAATATATTTGCAGCCAAAGCGAAGGGGGTTGAAAGGACTGGAGAACATGGAAAGTGAATCAGAAGAGTAGCCATGCAAGGCGGCACTCGACAGCTTCCTCACAAGATCGGGTTCTTCGAGAGAAACTATTGCCCCCCAACGGCCACATGATCTGTACTGTATTTTGAGAAGTATGGCGTTTGCTTCATCTCAACCACGAGCTTTGGTTCTAAACAGGCTTCTTTTGGATGGGGGAAGGTTTAGCTTTATTGCGAATAAAGCTTCGCCTCGAGGTTAAGTACTTGTTAGAAAGTGTGTAGGGAGCAATCAAGCTTGTTGTAATGGTAAACTTGCACGTCAATTATTAGGAAAATATCTAATACCAAGTAAGTGCTTTCGTTGTTGATCTGTGTACAGATCTTAATAGTAAATGGTCAGAGTGCATACAGAAAAGGAAGAGAAGAATTCTCAATTTTTTTTATCAGCTTAAATGCCTTGATACCAACCC CCATTAAAAAAAAAAAAAAAAACTTTATAAAAGAGTTGAAAAACACAACACTATATCCCTCCCTCTGCATCATCATATCATACTTATATCGTCGCCATTTCTATTCTCAAACTCAAGCTTTTTTCGCCTTCTCTATCTTTTCTCTTTACTTGCCGTATTTTCTCCCTCCTCCCTCAAAAAATCCTTTATTTTATCCTCGTAAACTGAGATTTGCTACAAACTAAGAATTCAAGCACTCAATTTCTGTCAAATTTGTAAAAAATGTTCAAGGGGAGAAGATTGTTTCAACCTGTATGAAATCGACTCGATTCGTACTCTTGCCAAATTGTGCTATTGTTGAAGATCCACTGTTAAGAAGCTTCGTTTTCTGTCGCGTTTGATTCATGATGTACCAGACAATTAGCCCGGATAATTTAGGTTCAAGTAGCGTTAGAAAACCAAACACAAACAATTTCAAATCAAGCAAAGAAGATCATCATCAAAACGGCGGCGAAAACGGGCGAATAGCAGGAAGCAGCAGTGCAGCAAATGTTACTCCGGCCACCACAACAACAATAACAAGTTTTGATGGGAACGGATTGATGCATAAATCTCCTCCTCGAAATCCGCATCCACAACAACAACAACAAGACAACCATCATCACCACCTTCATCATTCCGCCTCCAGTTCTTCTGCGGTTCATCAAAACCATGAAAGCAGCAGCGCGTGCGGCGGCGGCGGAAGCAGTGGTGATATGCTGCTACAATGGGGTCAAAATAAGAGATCGAGGTGTTCAAGAACCGAAGGTCGCTCCATGGTCAGTGTTGTCTTGGAGAAGCATCACTCAAGTAATAATAATCATATAATGCCACCACCACATCCACATCCACTTCCACTTCAAAATCCTAACCCTTCGTCTTTGCCGTCCACTTCTGGTAATAATGGTACTAGAACTGGAGTTTCTACCAGAGTTCGACCACATGGTTCGTGTACCCCTTCCTTCACCAAGAACAGGAACTTGGTTGATCAAATGGGTACAAATAGCGCGTCCCCGTCGAGAAATGGTGGGGTAAGCAGTAGTAGTAGCCGTCTGGTTTCTAGATCTACGGTGGTGGGGAAGCGATCCCCATCTTGTATAGAGAAGAATGATAAGAAAGTTGGGGTAATTAGGAAAGTGAAATCAGATGATTCTTTAGCGCCTCCTCCTACTAGCAATGGAATTAATCATGTTGAGCACGAGCACGGTGGTGGTGCCGCCGCGATGGTCCGTTCTCCGGTGACGGATGCCGAGAAGGGCGGTGGTAGTGAAGTGGTTGAATGGCCAAGGATATTCCTTTCACTTTCAAGGAAGGAAAAGGAAGATGATTTTTATGCAATGAAGGGTACTAAATTACCGCATAGACCCAAAAAGAGGCCCAAGGCTGTTGAAAGAGGCCTTCAGTATTGTTTTCCAGGTGTTTGGCTCTCAGATTTGACGAGGGCAAGATATGAAGTTAGAGAAAGGAAGAGTACCAAGAAGCCAAAGCGAAGGGGGTTGAAAGGACTGGAGAACATGGAAAGTGAATCAGAAGAGTAGCCATGCAAGGCGGCACTCGACAGCTTCCTCACAAGATCGGGTTCTTCGAGAGAAACTATTGCCCCCCAACGGCCACATGATCTGTACTGTATTTTGAGAAGTATGGCGTTTGCTTCATCTCAACCACGAGCTTTGGTTCTAAACAGGCTTCTTTTGGATGGGGGAAGGTTTAGCTTTATTGCGAATAAAGCTTCGCCTCGAGGTTAAGTACTTGTTAGAAAGTGTGTAGGGAGCAATCAAGCTTGTTGTAATGGTAAACTTGCACGTCAATTATTAGGAAAATATCTAATACCAAGTAAGTGCTTTCGTTGTTGATCTGTGTACAGATCTTAATAGTAAATGGTCAGAGTGCATACAGAAAAGGAAGAGAAGAATTCTCAATTTTTTTTATCAGCTTAAATGCCTTGATACCAACCC ATGATGTACCAGACAATTAGCCCGGATAATTTAGGTTCAAGTAGCGTTAGAAAACCAAACACAAACAATTTCAAATCAAGCAAAGAAGATCATCATCAAAACGGCGGCGAAAACGGGCGAATAGCAGGAAGCAGCAGTGCAGCAAATGTTACTCCGGCCACCACAACAACAATAACAAGTTTTGATGGGAACGGATTGATGCATAAATCTCCTCCTCGAAATCCGCATCCACAACAACAACAACAAGACAACCATCATCACCACCTTCATCATTCCGCCTCCAGTTCTTCTGCGGTTCATCAAAACCATGAAAGCAGCAGCGCGTGCGGCGGCGGCGGAAGCAGTGGTGATATGCTGCTACAATGGGGTCAAAATAAGAGATCGAGGTGTTCAAGAACCGAAGGTCGCTCCATGGTCAGTGTTGTCTTGGAGAAGCATCACTCAAGTAATAATAATCATATAATGCCACCACCACATCCACATCCACTTCCACTTCAAAATCCTAACCCTTCGTCTTTGCCGTCCACTTCTGGTAATAATGGTACTAGAACTGGAGTTTCTACCAGAGTTCGACCACATGGTTCGTGTACCCCTTCCTTCACCAAGAACAGGAACTTGGTTGATCAAATGGGTACAAATAGCGCGTCCCCGTCGAGAAATGGTGGGGTAAGCAGTAGTAGTAGCCGTCTGGTTTCTAGATCTACGGTGGTGGGGAAGCGATCCCCATCTTGTATAGAGAAGAATGATAAGAAAGTTGGGGTAATTAGGAAAGTGAAATCAGATGATTCTTTAGCGCCTCCTCCTACTAGCAATGGAATTAATCATGTTGAGCACGAGCACGGTGGTGGTGCCGCCGCGATGGTCCGTTCTCCGGTGACGGATGCCGAGAAGGGCGGTGGTAGTGAAGTGGTTGAATGGCCAAGGATATTCCTTTCACTTTCAAGGAAGGAAAAGGAAGATGATTTTTATGCAATGAAGGGTACTAAATTACCGCATAGACCCAAAAAGAGGCCCAAGGCTGTTGAAAGAGGCCTTCAGTATTGTTTTCCAGGTGTTTGGCTCTCAGATTTGACGAGGGCAAGATATGAAGTTAGAGAAAGGAAGAGTACCAAGAAGCCAAAGCGAAGGGGGTTGAAAGGACTGGAGAACATGGAAAGTGAATCAGAAGAGTAG MMYQTISPDNLGSSSVRKPNTNNFKSSKEDHHQNGGENGRIAGSSSAANVTPATTTTITSFDGNGLMHKSPPRNPHPQQQQQDNHHHHLHHSASSSSAVHQNHESSSACGGGGSSGDMLLQWGQNKRSRCSRTEGRSMVSVVLEKHHSSNNNHIMPPPHPHPLPLQNPNPSSLPSTSGNNGTRTGVSTRVRPHGSCTPSFTKNRNLVDQMGTNSASPSRNGGVSSSSSRLVSRSTVVGKRSPSCIEKNDKKVGVIRKVKSDDSLAPPPTSNGINHVEHEHGGGAAAMVRSPVTDAEKGGGSEVVEWPRIFLSLSRKEKEDDFYAMKGTKLPHRPKKRPKAVERGLQYCFPGVWLSDLTRARYEVRERKSTKKPKRRGLKGLENMESESEE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17753.1 vs. NCBI nr
Match: gi|902153460|gb|KNA05697.1| (hypothetical protein SOVF_187910 [Spinacia oleracea]) HSP 1 Score: 756.9 bits (1953), Expect = 1.700e-215 Identity = 390/392 (99.49%), Postives = 390/392 (99.49%), Query Frame = 1
BLAST of Spo17753.1 vs. NCBI nr
Match: gi|731345956|ref|XP_010684195.1| (PREDICTED: uncharacterized protein LOC104898786 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 443.4 bits (1139), Expect = 4.200e-121 Identity = 283/421 (67.22%), Postives = 315/421 (74.82%), Query Frame = 1
BLAST of Spo17753.1 vs. NCBI nr
Match: gi|870854420|gb|KMT06198.1| (hypothetical protein BVRB_7g162690 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 434.5 bits (1116), Expect = 2.000e-118 Identity = 279/417 (66.91%), Postives = 311/417 (74.58%), Query Frame = 1
BLAST of Spo17753.1 vs. NCBI nr
Match: gi|802753927|ref|XP_012088602.1| (PREDICTED: protein ENL isoform X2 [Jatropha curcas]) HSP 1 Score: 211.1 bits (536), Expect = 3.500e-51 Identity = 167/419 (39.86%), Postives = 220/419 (52.51%), Query Frame = 1
BLAST of Spo17753.1 vs. NCBI nr
Match: gi|566162863|ref|XP_006385862.1| (hypothetical protein POPTR_0003s15620g [Populus trichocarpa]) HSP 1 Score: 209.9 bits (533), Expect = 7.900e-51 Identity = 165/416 (39.66%), Postives = 221/416 (53.12%), Query Frame = 1
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEK6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187910 PE=4 SV=1) HSP 1 Score: 756.9 bits (1953), Expect = 1.200e-215 Identity = 390/392 (99.49%), Postives = 390/392 (99.49%), Query Frame = 1
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C227_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162690 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.400e-118 Identity = 279/417 (66.91%), Postives = 311/417 (74.58%), Query Frame = 1
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Match: U5GNA3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s15620g PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.500e-51 Identity = 165/416 (39.66%), Postives = 221/416 (53.12%), Query Frame = 1
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Match: B9GYR9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s15620g PE=4 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 5.500e-51 Identity = 165/416 (39.66%), Postives = 221/416 (53.12%), Query Frame = 1
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Match: A0A067JM35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27137 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 6.100e-50 Identity = 167/420 (39.76%), Postives = 220/420 (52.38%), Query Frame = 1
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Match: AT4G20300.2 (Protein of unknown function (DUF1639)) HSP 1 Score: 151.0 bits (380), Expect = 1.500e-36 Identity = 153/416 (36.78%), Postives = 199/416 (47.84%), Query Frame = 1
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Match: AT1G55340.1 (Protein of unknown function (DUF1639)) HSP 1 Score: 105.1 bits (261), Expect = 9.700e-23 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 1
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Match: AT3G03880.1 (Protein of unknown function (DUF1639)) HSP 1 Score: 102.4 bits (254), Expect = 6.300e-22 Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Match: AT1G48770.1 (Protein of unknown function (DUF1639)) HSP 1 Score: 63.2 bits (152), Expect = 4.200e-10 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Match: AT3G60410.1 (Protein of unknown function (DUF1639)) HSP 1 Score: 61.2 bits (147), Expect = 1.600e-9 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17753.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17753.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17753.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17753.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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