Spo17761 (gene)

Overview
NameSpo17761
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 7166146 .. 7166478 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAAGGCTTTATAAGTGTTAGGATATTGTTGACCAAATTGCTACTCATTAACCTTTGCTTAGATCTAACTCTTGGCTTAACCAACTTGAACAAAAAGAACACAAAAAAAGGTTGGACAAACCAACCGACGCCGGCTTCATTTCCACTCTCACTGAGAGAAACCTCGAGACTCCCGAAGAGAGAGAAAGAGAAAGATAAAGAGAAAGAGGTGATCTTACCAGATTTGCATCTGTACCATCCCCACCACCGATCGCCGCCTTCACAGCCACCGAGATGGCTCATCCCCATCACCTCCTCACTCTGTCCCTCCTCATCCTCTCCCTCCTGA

mRNA sequence

ATGCCTCAAGGCTTTATAAGTGTTAGGATATTGTTGACCAAATTGCTACTCATTAACCTTTGCTTAGATCTAACTCTTGGCTTAACCAACTTGAACAAAAAGAACACAAAAAAAGGTTGGACAAACCAACCGACGCCGGCTTCATTTCCACTCTCACTGAGAGAAACCTCGAGACTCCCGAAGAGAGAGAAAGAGAAAGATAAAGAGAAAGAGGTGATCTTACCAGATTTGCATCTGTACCATCCCCACCACCGATCGCCGCCTTCACAGCCACCGAGATGGCTCATCCCCATCACCTCCTCACTCTGTCCCTCCTCATCCTCTCCCTCCTGA

Coding sequence (CDS)

ATGCCTCAAGGCTTTATAAGTGTTAGGATATTGTTGACCAAATTGCTACTCATTAACCTTTGCTTAGATCTAACTCTTGGCTTAACCAACTTGAACAAAAAGAACACAAAAAAAGGTTGGACAAACCAACCGACGCCGGCTTCATTTCCACTCTCACTGAGAGAAACCTCGAGACTCCCGAAGAGAGAGAAAGAGAAAGATAAAGAGAAAGAGGTGATCTTACCAGATTTGCATCTGTACCATCCCCACCACCGATCGCCGCCTTCACAGCCACCGAGATGGCTCATCCCCATCACCTCCTCACTCTGTCCCTCCTCATCCTCTCCCTCCTGA

Protein sequence

MPQGFISVRILLTKLLLINLCLDLTLGLTNLNKKNTKKGWTNQPTPASFPLSLRETSRLPKREKEKDKEKEVILPDLHLYHPHHRSPPSQPPRWLIPITSSLCPSSSSPS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17761.1Spo17761.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17761.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17761.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17761.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17761.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0051788 response to misfolded protein
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009414 response to water deprivation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006508 proteolysis
biological_process GO:0006412 translation
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0050821 protein stabilization
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0009853 photorespiration
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003677 DNA binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
RNA-Seq Expression