Spo17769 (gene)

Overview
NameSpo17769
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibosomal protein S24e family protein, putative
Locationchr1 : 7068234 .. 7074354 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAAATAATAAAATATTAATCGTTAATAAGTTCAGACTGGGCTCTACTCTCTAAGCCCAGCCCATTAGTACCCATCTTCACTAAGCTCTAAGTCTTCCCCACTAAAACCCTCTTCGGCTCTTTCTGCAAATTTCTTCCCTTCGTTAATCACATCTTCCTCCTTTCTTCGAAATCAGCCATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTCGTTCAGTTCTCTCCCATTTCGTTTGTTTTTGTTGCAATTTTCATCAACAGTATTCCGCATTTTGTTTTTCCTGTGGGTTTTATTAGGGTTTTTGGGCATAGATTGTACGATAATTTATTAATTATGTTGTTATTTTTGTTTTGGATGATTTGACTCACAGTACTTCTTTGTCTATGTACTTGCAATATATGATGTGATTGATATAAATATGAATTGATTTCGTGGAGGAATTCCTTACAGTTTAATTGTGTCGAATCTGCTATTCTCTATATCATGATTTTATACTTTATTTTTCTTTTGAATTCTACTCTCATTGGGCATACTACGCATACATCCTTCACCTGTTGATGCAAACAATCTGTATAAATATTGAATCTTGCTTTAAATTATACAAACTAAAGCCAAAGAAATAAAAAATTAGCAAAGGAAACACTAGTCAACTACAGTAAAAGAAGGTTTGAGTAGCCGCAATTCAGCATAGAAGGTCTTCACAACTTGACTGCTAGGATTTCCCAATTGATCAGAAGCTTCTAGCCAGACCAGCCCATCACCTCAGTACGAACAGAATAGTAGCTCAATCCCTGCCACCCTCTTCAACCTGAACTAGCTTTTTGTAGATGGAGCACTGACCTCCTGCAGACCAGGAACTCAGGAAGGCCAACTGCAGAAAAGGCAAAACAAGCAGGATAACAGCTCCAACAGAAAACAACCATTTGCTTCTTCAGCCAACAAACACTTATGCAAACTGCAGTCAGTAGTCTCTGTAACCAAACAGGTCAGCCCCAAACAGTCGGCAGAAAAAGCCACCAGCAGTCAATTTTTGCCACCTGCAGCCTGCATCAGTCAGCAACAGACCCCAAGCAATTTCAGCAGTAACTCTGCCACAGCAACAGAAAACTGTAGAACATAACCAACACACCATAAGTCAACATAGGCCAACTCTTGTCAATAAACCAGTTGCCAACTGTCAGCATCTGTTGGAAACTTGGAATGGATTTTGCAGCCAGTTTCCATCTTCAGGTGTCCATTTCTCATTCTGTTTTCCTTGAACTTTCCAGCACATCTCATGTTGAATTGACTTGACAAGTTGATATGGATGCATCACAGCCTGATTCCAGAAGGTATTATTTCGTGCTCGTCAGATAGGTAAACCGATGCTGATAATGCCGCAAAGAAACATTTTTTCTGAAGTTTGGGACCAGCATTCCTACCCCACTTCTTCCAACAGAAATGAAGCACATCCTCACCCCTAGATCTGAAACCAGCCAATTACATAATCTCCTATAGCATGTATCACTATAGATGCACCTAAACAACAAATGCTAAACACTGCACATCTACAGAATAAACAACTTCCATCCGTTATAAACTCACAGCCACCAACTTGTCCCTTGTTCTAAGCTTACCAAGGGCAGCCGTCCATGAAATGAGTTAGTGTTTACTGTTTAGACACGTTGTATCTGTTCCAGAACCAGACACTCCAAGGGACTTTGATTTCTTCCCCATTGACCCATCTATACACTGCAGAAATAGAATATATCCTATTCACATGGTCCCATCCTTCTTGCACAAACCCAGGTTTTAAGACATCTCTACTCTTGCATACACCCTTCCAGCTCCGCTGTTATCTCTTGGGTGGGACATGTTCCCACCAACTCTGTTTTTTACTGTAAACGAAAACCCATAGATTGTTAGCTTTCAAAGAAATCTGCCAAACGTACTCGCCCTGTGCAGCTAAATATTCAACTTAAAATACCGTTATTTTTGCACTGGTGTATACACTCTTAGATAGTATACATAAGTATGTGTTCATGAATTGTTTTCTAGGAGATGGTTTTCAGTGCATAACCAGCAAGGCTGCTGCTGTGCTTTATTTTACTATCTTGTTTGAGGGATGTTTTATAACAGCTGGAAGCTAGGGGGTAAAGGTTATGCTTGCATGAATTCATGAGATGTCTACAGGTCGCTCAATAGTCAATAATTCGTGGGAACTTTCATTTTATTTGCAGAGTTACGTTGCAGATAAATATTTGCATTTGCATTATCATAGAATTTGGAATACCTGGAGGCACATGATGAAGCATATATTAATATCGCCGATGTTTTTCATTGACTATATTTCCTTAGATTGAGTGAATTGAAGGAACGTGACTTTATGGAGTGTAGATATTCTGGGCTCCAGTTTTTATTTGCAATGCTGTTATTGTCTCTGTTGTATTCTTCCTTTGTTTAATATATATCCAATTATATATGGAAGATGAAGTATTCCTGTATACTTGCCTTGATCACTATTGTTATCATGAGTGATGTCTTATCCTGTTCTTACATTCTAGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGTAATTATCTTGTTTTGTGAAGCATGTAGTTTATGGTTATTTTACTGCGTTCACTTCAGATCTTTCTTGTTCCTTCATTATTATAACTCATAGTTGATGTATGGTGTGCAACAACTTTTGAAGTGTTTTTTTTGGGTTGCCCATCAATTGATTACACCATTAAGAAACACGACATTCTTACGGAAAATGGTGACCAAACCTATTCAACTGTTTTGTGAGAAGTGGACTGTTATTTGCCTCTATTCTTCTTTCTAGCTCCAATGTGTTACTTAAACGTATTCCTCAAAGGCTGTAGTGCTGTACTGATCTCAAATTTAAAAAATCAATTTTGAGTTGTAACTTTGATGTTCGTCTGTCCCAGGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAAAAAATTTAGGTTTCTTCCCATTAAGTTTTTCTGTGTGCGGTTTTATGTAGTTATGTTGGTTTGTTCAATTTCAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTAAGTAGTACTACTTTTCAGTTTTCAAAACTCTAAAGGCTGTTATGTTTTATTGTCTTGAATGTTGTGAGTCGAAAGGTGTTCAAGTGCTTATAGAAGACACGATCTTATTCGAATGAGAATTGTGCAGAACATGATTTAACCCACTTGTCCTGTGAGGAAGTTGGGACTTTAGCAATCTGAGTATTGTCTTTGCCTCTTTGGATCTACGTGCTTATTGAATTTGAATTGAACTCTTGTTATTTATTCAAACCACTTGCAGAAAAGCTATTTACTGCCTTCCGTTAACGGTAGATAAACACTGTTACCCCCATTTAATAATTTCTGGTTCCTGTTGTTTAGCTATTGGTGAATTTTCCTTTCTCGATTCTCTGGCTAAATGTGTTTTCCTTCAAGTTATTGTTATAATATTGCGTGTCAGTACTTTTCGTGTAATGTTTATTCTGGTTAATGTTTTGAGACTTCTATGCTCTGCTAGTCTTTGGAAGGATGCACTAAACTGAGGGACTTTTTTTGTTGCTCGTTTTTTTTATCATTTGTTGAAAATGGATCTCATATTGGAAATTTTATTTAGAACTTAGAAGCACATCCACATGACTGAAGTTTTCGATTAGATTGCTGGAAATGGTTGGTATATGTTTGGAACTGCCCGAACCCTTCGAATCAACAAAAAGAAAAAGAAACAGAAAAGTCCGTTATCAGAACCCCTTGACATACCAGACTCATTTCCACCATTGCCTCCCTTTCCCTGTGCTTCTTCCCAGTTACTGCCTCTTCTCCACCTCCCTTCTCCAACAATCGACACTCCTCCCCCTCCCATGATGACCTTCTCTCCTTCCCCCACAATTCTTCGTTTTGTGCTCTCGTCATCCACTCATCCTCACTACTTCCTCCTGCTTCTTATCTCCCTTAGCCTCTCCTCCTGCCATGGAACCCAGCAATAATAATAATAAAACACGAGAAATCATACTTTCCGATCTTCAACCTATTACTCCTACAAGTTGCTTTTAATACAACAGAGTTACATACAAATTTTGGTGGTGAAAACTCAACAACCCAAGTATGTTTTAGAGAGGGAGGGAAGAATGGTAATTTGGTCAACTGAACAGGAAACATTTGAAATCAAGTATTATTTTGTACTTCCGAGGCATCATCGTTTCCAAAACCATGGTTTTGATCTTTTATCTCATAATTGGTATTTGTTACCAGATGGTAATTTGGTTAGGTTCGAGTACAGTTGAACTAATATAGTACGAAGAACAAGATTTGCTTTGTTTTGCTTGTTCAATGAACTAATGACCCGTTTGGTAGGTTGTAATAATGGTGGTAATGTCAATGTGAATGAATTTATATTGTAAAATTGTGAGAAAACTCATATACCAATGCCCAAGGTAATGCTAATTCACCTAAAGTATCTCATTTTCTTCATAAATCTTCATTATCATCCTTTACCACTTGGATGGTGGTATTGGGCGGGAATGAAAATCTATGAAGAAAAATACAATCTAGGGATGAGATTGCATTACCATGGACTCAGATTCATTTCCATCTGCAATTTATTGGCGGCTACCAAAAGGATCATAAGTGCGCATAGTACTTCAGATTTGAAAAGTATGCTTGCCTTGGAATGGATTTAGACTTTGACCTTCTTATATGGCCTGTGGAGAACCAACCTTGGGTTGTTGAAATCCTAACTGACTACAGATGTGCAATTTGATGCTTCTACATAATTTAGTTTCGAGAGTGGAATGAGTTATTACACTAAGGAGTTGACATCCTCTTTTCATCACTTAATTTTATTAGTAGCATGTTAGAAAATCTTATGATAAACCATTGCTGTATTAGGAAAGATGACTAAATAGTTCCAGCAGTAGATTATATTATATTGAAATACTGTATCCTTTCTGCTGGCGTCTATCTTCTGTGACACAAATTGCTCTCATTTTCTGCCATTTAGGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGTCAGAAATTAATCATATCATATGCACAAGGCAGCTTGAAATTGCATATTTTTTTTTTTACTCCGTGTAATTGTTGTTTGAAACAAAACCTTGTTTTGCAATTGCAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGAAACAATTTTGATTGCTGATAACAATGCAACAATTTTCAACATTGAGTTGCTACAACCTTTGATTTTTAAGTTCATTGCTTCACTCAGAGGCTTCAAACTTTGATGTTTGCCTTGTCGATGAAGCTTGTCTTTCAAAAGCACTCAAGTTATGTTTAGTTAATCGCTTCATGTTCATTCCCCGCCTTTTGGGTTTATAGATTTTAGACGGTCTTTCCATTCATAATAGTATTTGCTAACTTACTACATATAACAAAACTATGTATCCTTGAGTTTTAATTTACTTTTGTTGCACAATTTGGGATTTTTTTTTCATACTTTTATGTATCCTCACTATGAAAATAACATAATTGTATGTCAAAAAAAAAGAGTTAAATATATAATTTCCTGCATAGTAATTGTGATT

mRNA sequence

GATAAATAATAAAATATTAATCGTTAATAAGTTCAGACTGGGCTCTACTCTCTAAGCCCAGCCCATTAGTACCCATCTTCACTAAGCTCTAAGTCTTCCCCACTAAAACCCTCTTCGGCTCTTTCTGCAAATTTCTTCCCTTCGTTAATCACATCTTCCTCCTTTCTTCGAAATCAGCCATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGAAACAATTTTGATTGCTGATAACAATGCAACAATTTTCAACATTGAGTTGCTACAACCTTTGATTTTTAAGTTCATTGCTTCACTCAGAGGCTTCAAACTTTGATGTTTGCCTTGTCGATGAAGCTTGTCTTTCAAAAGCACTCAAGTTATGTTTAGTTAATCGCTTCATGTTCATTCCCCGCCTTTTGGGTTTATAGATTTTAGACGGTCTTTCCATTCATAATAGTATTTGCTAACTTACTACATATAACAAAACTATGTATCCTTGAGTTTTAATTTACTTTTGTTGCACAATTTGGGATTTTTTTTTCATACTTTTATGTATCCTCACTATGAAAATAACATAATTGTATGTCAAAAAAAAAGAGTTAAATATATAATTTCCTGCATAGTAATTGTGATT

Coding sequence (CDS)

ATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGA

Protein sequence

MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17769.1Spo17769.1mRNA


Homology
[Close]
BLAST of Spo17769.1 vs. NCBI nr
Match: gi|902210895|gb|KNA16571.1| (hypothetical protein SOVF_087620 [Spinacia oleracea])

HSP 1 Score: 466.5 bits (1199), Expect = 2.800e-128
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

		  

Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ
Sbjct: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF
Sbjct: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
           GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE
Sbjct: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ
Sbjct: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 232
[Close]
BLAST of Spo17769.1 vs. NCBI nr
Match: gi|731345908|ref|XP_010684169.1| (PREDICTED: uncharacterized protein LOC104898764 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 315.5 bits (807), Expect = 7.900e-83
Identity = 159/229 (69.43%), Postives = 182/229 (79.48%), Query Frame = 1 

		  

Query: 4   SRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPS 63
           SRG Q LN LL+STN R+ Q L  FLRDS RHFST  EHQ  PQ P S T     L PPS
Sbjct: 4   SRGIQILNHLLKSTNGRTPQNLPLFLRDSPRHFSTRNEHQPLPQHPHSPTPIDSFLHPPS 63

Query: 64  SGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSA 123
            GLVYGRL GIS+NTLKTDIINLFEG  LTLDDIKV+Y+R ++PMAMLVQF SM+ F +A
Sbjct: 64  PGLVYGRLFGISANTLKTDIINLFEGSNLTLDDIKVEYNRIFHPMAMLVQFRSMADFSAA 123

Query: 124 IRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASS 183
            RELTR+SR FR+EKVVDH++WD VTP+NGRYVLF GIPRNAL +D++R L GCNYEASS
Sbjct: 124 FRELTRRSRSFRMEKVVDHRQWDLVTPYNGRYVLFQGIPRNALPDDIDRLLSGCNYEASS 183

Query: 184 LDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           L++F      GP R+A VRFPSPIEAMNAV++KNG+FCLN RV AQLIQ
Sbjct: 184 LEIFVRPLQSGPIRMATVRFPSPIEAMNAVIRKNGAFCLNNRVLAQLIQ 232
[Close]
BLAST of Spo17769.1 vs. NCBI nr
Match: gi|694426660|ref|XP_009340998.1| (PREDICTED: uncharacterized protein LOC103933069 [Pyrus x bretschneideri])

HSP 1 Score: 212.6 bits (540), Expect = 7.200e-52
Identity = 111/226 (49.12%), Postives = 148/226 (65.49%), Query Frame = 1 

		  

Query: 11  NQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHA----PSLQPPSSGL 70
           + L   T  R  + L   L +  R FST  E+  Q  PP    Q A    P LQ P++GL
Sbjct: 13  SNLAVRTAVRQNRGLPMLLGEPARRFSTEAENPPQNSPPSDQPQDASPIEPFLQTPTTGL 72

Query: 71  VYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRE 130
           VYG+LLGIS  TLKTD++N+ EGC L+L+D+KVDY+RA+ PM M+VQF S   F +A R 
Sbjct: 73  VYGKLLGISRYTLKTDVVNMLEGCNLSLEDVKVDYNRAFTPMGMVVQFRSWKAFDNAARV 132

Query: 131 LTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDL 190
           ++RK R F+LE+  +   WD++TPH+G+ VL  GIP+ A  EDVERFL GC Y++SSL +
Sbjct: 133 ISRKGRLFKLER-ANRSLWDNLTPHDGKTVLLQGIPQTAAPEDVERFLSGCEYDSSSLQI 192

Query: 191 FFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            F R+   PS+ A VRFPS  EAMNA L KN  FC NG++  +++Q
Sbjct: 193 IF-RSFPEPSKFATVRFPSQTEAMNAFLAKNKGFCQNGQILMRVLQ 236
[Close]
BLAST of Spo17769.1 vs. NCBI nr
Match: gi|1009165193|ref|XP_015900911.1| (PREDICTED: uncharacterized protein LOC107434017 [Ziziphus jujuba])

HSP 1 Score: 210.3 bits (534), Expect = 3.600e-51
Identity = 103/207 (49.76%), Postives = 141/207 (68.12%), Query Frame = 1 

		  

Query: 26  SPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIIN 85
           S  LR+S R  ST  E+Q    PP  ++     L+ P +GLVYG+L GI+ NTLKTDI+N
Sbjct: 29  SLLLRESPRFISTEAENQPPKDPPVENS----FLETPGTGLVYGKLYGITRNTLKTDIVN 88

Query: 86  LFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKW 145
           L EGC LTL+D+KVDY R++ P+ M+VQF S   +  A R ++R+ R  RLE+  D  +W
Sbjct: 89  LLEGCNLTLEDVKVDYSRSFTPLGMMVQFPSRQAYEQAARVISRRGRLNRLERA-DRSQW 148

Query: 146 DSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPS 205
           D +TP++G+ VL  GIPRNA+ EDVERFL GC Y+ASS+ +F       P ++A +RFPS
Sbjct: 149 DILTPYDGKTVLLQGIPRNAVPEDVERFLSGCQYDASSIQIFLRAAYPDPIKMATIRFPS 208

Query: 206 PIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           P EAMNA + KN +FCLN +V  +++Q
Sbjct: 209 PTEAMNAFITKNRAFCLNSQVTVRVLQ 230
[Close]
BLAST of Spo17769.1 vs. NCBI nr
Match: gi|694421449|ref|XP_009338576.1| (PREDICTED: uncharacterized protein LOC103930898 [Pyrus x bretschneideri])

HSP 1 Score: 208.4 bits (529), Expect = 1.400e-50
Identity = 109/226 (48.23%), Postives = 147/226 (65.04%), Query Frame = 1 

		  

Query: 11  NQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHA----PSLQPPSSGL 70
           + L   T  R  + L   L +  R FST  E+  Q  PP    Q A    P LQ P++GL
Sbjct: 13  SNLAVRTAVRQNRGLPMLLGEPARRFSTEAENPPQNSPPSDQPQDASPIEPFLQTPTTGL 72

Query: 71  VYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRE 130
           VYG+LLGIS  TLKTD++N+ EGC L+L+D+KVDY+RA+ PM M+VQF S   F +A R 
Sbjct: 73  VYGKLLGISRYTLKTDVVNMLEGCNLSLEDVKVDYNRAFTPMGMVVQFRSWKAFDNAARV 132

Query: 131 LTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDL 190
           ++RK R F+LE+  +   WD++TPH+G+ VL  GIP+ A  EDVERFL GC Y++SSL +
Sbjct: 133 ISRKGRLFKLER-ANRSLWDNLTPHDGKTVLLQGIPQTAAPEDVERFLSGCEYDSSSLQI 192

Query: 191 FFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            F R+   PS+ A +RF S  EAMNA L KN  FC NG++  +++Q
Sbjct: 193 IF-RSFPEPSKFATIRFLSQTEAMNAFLAKNKGFCQNGQILMRVLQ 236
[Close]
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087620 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.900e-128
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

		  

Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ
Sbjct: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF
Sbjct: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
           GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE
Sbjct: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ
Sbjct: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 232
[Close]
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1H8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162420 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.500e-83
Identity = 159/229 (69.43%), Postives = 182/229 (79.48%), Query Frame = 1 

		  

Query: 4   SRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPS 63
           SRG Q LN LL+STN R+ Q L  FLRDS RHFST  EHQ  PQ P S T     L PPS
Sbjct: 4   SRGIQILNHLLKSTNGRTPQNLPLFLRDSPRHFSTRNEHQPLPQHPHSPTPIDSFLHPPS 63

Query: 64  SGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSA 123
            GLVYGRL GIS+NTLKTDIINLFEG  LTLDDIKV+Y+R ++PMAMLVQF SM+ F +A
Sbjct: 64  PGLVYGRLFGISANTLKTDIINLFEGSNLTLDDIKVEYNRIFHPMAMLVQFRSMADFSAA 123

Query: 124 IRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASS 183
            RELTR+SR FR+EKVVDH++WD VTP+NGRYVLF GIPRNAL +D++R L GCNYEASS
Sbjct: 124 FRELTRRSRSFRMEKVVDHRQWDLVTPYNGRYVLFQGIPRNALPDDIDRLLSGCNYEASS 183

Query: 184 LDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           L++F      GP R+A VRFPSPIEAMNAV++KNG+FCLN RV AQLIQ
Sbjct: 184 LEIFVRPLQSGPIRMATVRFPSPIEAMNAVIRKNGAFCLNNRVLAQLIQ 232
[Close]
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: V4S491_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012666mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.600e-48
Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1 

		  

Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           M+L R A K +  L++   + I +L   LR S +HFST TE    P PP +       LQ
Sbjct: 1   MSLLRNAIKSSVSLRTI--KPIHSLPSLLRQSPKHFSTETE--APPPPPPNDASIDLFLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
            P+ G+ YG+LLGIS  TLK+DIINL EGC LT DD+KV+Y R Y P AM++QF S S +
Sbjct: 61  TPTKGVFYGKLLGISRQTLKSDIINLLEGCNLTPDDLKVNYTRNYMPFAMMMQFPSFSAY 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
            +A R + RK R +RLE+  +  +WD V P+NG+ VL   +PR A+ EDVERFL GC YE
Sbjct: 121 DNAFRLIGRKGRLYRLER-AEQSEWDIVMPYNGKTVLLQNVPRIAVAEDVERFLSGCEYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASS+     +++    + A VRFPS  +AM+A ++KN  FCLN +V+ +++Q
Sbjct: 181 ASSISFMLRQSLPDSIKWATVRFPSQTQAMDAFIRKNRGFCLNNQVSVRVLQ 227
[Close]
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: W1NK87_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00023p00176440 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.200e-47
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 1 

		  

Query: 27  PFLRDS-LRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIIN 86
           P L D   R F T    Q Q Q   +S+   P LQPP  GL YGRL G   N LKTD+I+
Sbjct: 26  PLLPDGRCRAFCTAGSEQQQQQEEGASSPVDPFLQPPPKGLTYGRLTGFGRNALKTDLIH 85

Query: 87  LFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKW 146
            F+GC LT++DIKV+Y+R + P+ ML+QF S S F +A R + R+ R +RL+K VD  +W
Sbjct: 86  FFDGCNLTVEDIKVEYNRTFVPLGMLLQFPSRSAFDTATRLVFRRGRLYRLDK-VDRGQW 145

Query: 147 DSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPS 206
           D VTP++G+ +LF GIPR A  EDVERFL GC Y+ S L L        P R+A VRFP+
Sbjct: 146 DIVTPYDGKVLLFQGIPRQAFPEDVERFLSGCRYDGSDLQLLMRPGFPDPIRLALVRFPT 205

Query: 207 PIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            ++AMNA+  KN  FC+N  + A+++Q
Sbjct: 206 QLDAMNALRMKNRGFCINSPITARILQ 231
[Close]
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: D7TQC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02910 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.200e-46
Identity = 107/231 (46.32%), Postives = 149/231 (64.50%), Query Frame = 1 

		  

Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MN    A + N+LLQ+  A+  Q L P L   +R FST  E       PQ S+   P LQ
Sbjct: 1   MNPVANANRWNRLLQT--AKPSQGL-PLL---IRSFSTEAE------APQVSSSD-PFLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPS+GLVYGRL GI+ +TL+TDI+NL EGC LTL D+KVDY+R+Y P+ M+VQF S   F
Sbjct: 61  PPSTGLVYGRLSGITKHTLRTDILNLLEGCNLTLQDVKVDYNRSYFPVGMMVQFPSRYAF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
             AI+ + +K R ++L++  D  +WD +  ++G+ VL  G+PRNAL EDVERFL GC + 
Sbjct: 121 DHAIKVINKKGRLYKLDR-ADRSQWDPLRTYDGKTVLLQGLPRNALPEDVERFLAGCEFN 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLI 232
           +S++ L   +    P R+A V FPS  +AMNA + KN  FCLN ++  +++
Sbjct: 181 SSNIQLTTRQAFPDPIRMALVHFPSQSQAMNAFITKNRGFCLNNQILVRVL 217
[Close]
BLAST of Spo17769.1 vs. TAIR (Arabidopsis)
Match: AT5G02740.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 165.6 bits (418), Expect = 3.600e-41
Identity = 90/234 (38.46%), Postives = 134/234 (57.26%), Query Frame = 1 

		  

Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           M+++R A + +  L+  +    ++  PFL++  +  ST TE     QPP +S    P   
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLPFLQEWRKCLSTATE-----QPPPASPLPPPPGG 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYN--PMAMLVQFSSMS 120
            P  G  YG+  G S + LKTDI+N+ EGC LT DD+K +Y R  N  P A+ VQF S+S
Sbjct: 61  SPGEGRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLS 120

Query: 121 HFGSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCN 180
            +  A+R + +K + +RLEK    Q WD + P+ G+ V   GIP NA+ +D++RFL GC 
Sbjct: 121 AYDKALRNIAKKGKLYRLEKAARAQ-WDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCL 180

Query: 181 YEASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           Y   S+     + +    R+A VRF S  +AMNA + KN +F LN R+  Q++Q
Sbjct: 181 YYPGSIQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228
The following BLAST results are available for this feature:
BLAST of Spo17769.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902210895|gb|KNA16571.1|2.8e-128100.hypothetical protein SOVF_0876... [more]
gi|731345908|ref|XP_010684169.1|7.9e-8369.4PREDICTED: uncharacterized pro... [more]
gi|694426660|ref|XP_009340998.1|7.2e-5249.1PREDICTED: uncharacterized pro... [more]
gi|1009165193|ref|XP_015900911.1|3.6e-5149.7PREDICTED: uncharacterized pro... [more]
gi|694421449|ref|XP_009338576.1|1.4e-5048.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RAQ4_SPIOL1.9e-128100.Uncharacterized protein OS=Spi... [more]
A0A0J8C1H8_BETVU5.5e-8369.4Uncharacterized protein OS=Bet... [more]
V4S491_9ROSI2.6e-4846.5Uncharacterized protein OS=Cit... [more]
W1NK87_AMBTC2.2e-4748.3Uncharacterized protein OS=Amb... [more]
D7TQC4_VITVI9.2e-4646.3Putative uncharacterized prote... [more]
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BLAST of Spo17769.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17769.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G02740.13.6e-4138.4Ribosomal protein S24e family ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 147..226
score: 8.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0007017 microtubule-based process
biological_process GO:0044238 primary metabolic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0010020 chloroplast fission
biological_process GO:0009902 chloroplast relocation
biological_process GO:0051258 protein polymerization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0032259 methylation
biological_process GO:0009637 response to blue light
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006479 protein methylation
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0009790 embryo development
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0033617 mitochondrial respiratory chain complex IV assembly
biological_process GO:0016099 monoterpenoid biosynthetic process
biological_process GO:0006396 RNA processing
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0001510 RNA methylation
biological_process GO:0006950 response to stress
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006334 nucleosome assembly
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016310 phosphorylation
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0000741 karyogamy
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0034969 histone arginine methylation
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006364 rRNA processing
biological_process GO:0009642 response to light intensity
biological_process GO:0009658 chloroplast organization
biological_process GO:0006486 protein glycosylation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0006284 base-excision repair
biological_process GO:0009156 ribonucleoside monophosphate biosynthetic process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0090351 seedling development
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0010468 regulation of gene expression
biological_process GO:0042742 defense response to bacterium
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0008152 metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006825 copper ion transport
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005874 microtubule
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0010319 stromule
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009536 plastid
cellular_component GO:0042646 plastid nucleoid
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0004844 uracil DNA N-glycosylase activity
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005488 binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0019843 rRNA binding
molecular_function GO:0020037 heme binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004044 amidophosphoribosyltransferase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0008276 protein methyltransferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005525 GTP binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo247500.78Barchart | Table
Spo023300.75Barchart | Table
Spo050780.74Barchart | Table
Spo094410.74Barchart | Table
Spo012410.74Barchart | Table
Spo076440.73Barchart | Table
Spo006160.73Barchart | Table
Spo192200.73Barchart | Table
Spo236240.73Barchart | Table
Spo170650.73Barchart | Table
Spo029220.72Barchart | Table
Spo259130.72Barchart | Table
Spo227840.71Barchart | Table
Spo002210.71Barchart | Table
Spo261950.71Barchart | Table
Spo181500.71Barchart | Table
Spo057330.71Barchart | Table
Spo148580.70Barchart | Table
Spo194180.70Barchart | Table
Spo009210.70Barchart | Table
Spo106230.70Barchart | Table
Spo111840.70Barchart | Table
Spo232270.69Barchart | Table
Spo158410.69Barchart | Table
Spo161840.69Barchart | Table
Spo009200.69Barchart | Table
Spo005040.69Barchart | Table
Spo043770.69Barchart | Table
Spo089980.69Barchart | Table
Spo180960.69Barchart | Table
Spo062870.68Barchart | Table
Spo039720.68Barchart | Table
Spo121960.68Barchart | Table
Spo008060.68Barchart | Table
Spo226100.68Barchart | Table
Spo025190.68Barchart | Table
Spo010460.68Barchart | Table
Spo182700.68Barchart | Table
Spo168060.68Barchart | Table
Spo156310.68Barchart | Table
Spo157590.68Barchart | Table
Spo179870.68Barchart | Table
Spo239220.68Barchart | Table
Spo000270.67Barchart | Table
Spo012720.67Barchart | Table
Spo029640.67Barchart | Table
Spo081650.67Barchart | Table
Spo123770.67Barchart | Table
Spo217570.67Barchart | Table
Spo227320.67Barchart | Table
Spo239330.67Barchart | Table
Spo243880.67Barchart | Table
Spo173480.66Barchart | Table
Spo175950.66Barchart | Table
Spo156200.66Barchart | Table
Spo148570.66Barchart | Table
Spo181490.66Barchart | Table
Spo086250.66Barchart | Table
Spo085990.66Barchart | Table
Spo079280.66Barchart | Table
Spo266610.66Barchart | Table
Spo272910.66Barchart | Table
Spo074900.66Barchart | Table
Spo027510.66Barchart | Table
Spo163360.66Barchart | Table
Spo182960.66Barchart | Table
Spo184790.66Barchart | Table
Spo191950.66Barchart | Table
Spo131180.66Barchart | Table
Spo197760.66Barchart | Table
Spo224560.66Barchart | Table
Spo263310.66Barchart | Table
Spo100850.66Barchart | Table
Spo147470.65Barchart | Table
Spo147420.65Barchart | Table
Spo020010.65Barchart | Table
Spo157660.65Barchart | Table
Spo128220.65Barchart | Table
Spo144280.65Barchart | Table
Spo157310.65Barchart | Table
Spo165680.65Barchart | Table