Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTATGCGATCCGCTTTTAACCCGCACCGACTCTGACCCAACCCGACCAGTAACCAGATGTAGTTGAGACTTGAGAGTAGAAAATATAACTAAGCACGTGACAAATTAAATTCTTCTTTGGCAACGCATATGCTTTGCTTAGAAATTACGAGGTGATACTCAACGGTTTGCAGCGTGTGTCGTTTGATTTCTGACGCAAAGTTGAGTCGGCGTTTTCTTACCATTTTTATAAACCCTACTTCTGCTCTTATCTTTTTAACTCCGTATATAATTTTCCCAATCCCCAGTTTTCTCAACAACTCCTATTTTCTCTCTCCTCTTTTCCGCCATTGTTCAGTTTTTTTGTGCTCCAATTTTGAGCCATTGTTTCGTCTTTTTGGGTTAAATTTTAGCGAATCAGATTCATAAAATTCCATCAAAAAGTTATATCGAAGCTTCAAATTGGTTGTGAATGGTGGAAATCTTAAGTAATAGTAATTACATGCGATCTTCCCCTTTCCTCTTCACAAGGGGGATCGTCGCTCACTCTCTCTCCTCTGCTTCTTCTTTCGCTTTCGGTTCTTGCATGGAAGGCTGGTACTACCGCTGCCTTGGCCTTGACCCGTAAATTAAATCCCCAAATTTACGATAGAGTTCAATCAATCAATTCTTCAATCTGGAAAATTTTGAAATTATTATTTTTGATTTGAGAAAACAAATCCTCTGTTTTTATTTTATTATAAATCAATTTTTTTGATCTGAAATTGAGTTATTGTTTTTTATTTGAGAGATATTTTTAAAAAAAAACAAAATCGGCAAAAAAAAATGTTGCTAAGCAAGCAGAAGAAGGCGAAGGGTAATCGGGTGTTGATAACTGTTAACGTGGTTGGAAGTGCGGGCCCTCTGAGGTTTGTGGTGAATGAAAGGGAGATTGTGGCAGCTGTGATTGATATGGCGTTGAAATCTTATGCTCGCGAAGGTCGTCTTCCTGTTCTTGGCTCGAATCTCAATGATTTCCTTCTTTACTGCCCTATTGCCGGATCAGATGGTATTTACCTTTTTCTTCCATTTAATTTGATTTGATTATTATGTTTGTTGTTGCTTATGTTGATGAATTTGATTGGTTAATTTTGTATTGAAGTTGAAATTTTGGTGTTTGTTGACCAGGTTAGGTGGATATTGGTGTTTGTGATTAGGTTAGGTGAAATTTGGTGTACTCCGCATATGATTAGATTCTTGGTGATTTTTGTGACTAGGTTTGATGAATTTAAAGTTGTCTTGTGGGAAAATGACCTGTTTTTATAGGTGATTAGAGTTGAATGAAAAATTTGAGGTTAGGGATATGAGAATTGTTCTTGCACAATTCGAATCAGTCGTTTGATAACTATGTGATTGATCAAAAGGAGGTTGTTCTTTACACCAGCATGAGTCATAATGTAGCATTAACTTGGGTTGTATAACTATTGTCAAGTGAGGGGAGTTAGAAACAAAATATTGGTAGAATGAGGAAGATAACTGTAAAAAAAATTGTGTCATTTTAGGCCCTTTTGAAATTAAATTAAAATCAGGAATAGACTTGTCAATTTAAGCTTTTGATTGCGTTTATCAAAGATTCTGAATAGTTGAAGTAATAATAAGACATATAGCCTATGTTAGAAGTTCTCTCGAGGCCTGTGAACTTCTGTGCAAGGATAGACAGACTATGCCATTTCTTGTATAGAATAATTTTAGCTGCTTACAAACGAAGCCAACTATAAAGCCTAGAGCTTTTAGCCGGGACTGGGTCTGGTGGTGTATAACGTGTAGCCACATCATAACTGCCTTTAGAAACTAAACATTGATAGTATAATTTCCTTAAACAACAGGCAGAAATGCGTGAATGTGTATCTGTGTTGGCGTATCCACGAGGAAAAAGAATGAAACTTGCATTCATGTTCTGTGATTGTGCAGGACTGGCAACAAAAAGGGACATAAAGCATCTGTTAATTGTGCTACTGAAATAAACATATTCCTTCCATTAGACAATCAATATAGTTGTGCCATATTTAGATGCAGGATATCTGATATAATAGAATATGGCATGAGACTCTTTAAGGTACAATCATGAAGTAACTACAAATTAAACTATCCAGTCACCGTGATTGAAATCTGTTTTATGTGTTGTACTTTGGGGCTTTGCAGTAGTTTTACTTAATGAGAAGTATAAGATGCTAAGAAAAGAATTAAAAATTATGGGTTTGACACAGGTATATTACTTCTCTCTTATAATCGATGCCCATCCGAAAATGTGGTAGGAGTTCGGGAGAAATTTCCGTTGTTTCTTCTTTGTTCTTGTTTCTATAAACCCCTTACCACGCACATTCCCTAAGAAAATTTTATATCATTTGCGCATTCATTAGTTATTGAATTTCTTTTAGATGGCCCAATTTATAATCCCACTGTCAGTATCATGGAATATGGATTCCTGTTTCTACTACTGTCTACATTGTTTTTGCCAAATGTGAGGCCAGCTCTTATTCGTTCCATGTTTTCAGATTTCAGACTGTTCTCTGTTCCGTGCCTACAACTCAAGGTTAACTGAACATTCGATGTTCAATAAATCGGTACAATGTAGTTTAAGAGCTTTATCATCCACATAAATCTAAGCTTCGTTATTAGGGATAACTATTGTCTAGCTTCGGTTTTTGCTTTGTTGTTTGATGATTGCTCTGCAATGAGATGGGTTATATCTATGGTCTGATTGTTCTCCATGGTTTATGAAGCTTTAAGTCCTATTGAGACGATTGGAGCTCATGGTGCCCGGAATTTCCTTCTGTGTAAGAAGCCGCAGCCTCAGACTCAGACAGAGAAAGCTGCAAAGGTTAAGGGTGATGCTGTTACCACTGAAGCTTCTATTACAAGAAGGGGAAATGGAAGCTGGAAGTCGTGGATCAATAAGACCCTCATTCTTAAAGTTGCCTCTCATTAAAGATGGATTTTATACAGACTGCTTCTCTGGATCCTAAGGCGATGATTAGTCTTGCAACTGTTGTAAGAGATTTAATTATGCCCATTTAACTACTTGTTATTATCATACCCATTTCATTTGTTGAATTGTATGGGAAGGATTTTCTACAGAAAAACCGATTGATTTTTATTTTTTCCTTTTTTCTTTTGTCATTTGAAAGCAATAGTTTTTACGTCTATTGTGGATCATTGAGAATTCAATAAAGTTCTACTACCTTTATATTTTTATTAACGATGTATGGTGTTCGGATGCGACTAGGGGTTCGGAAGACTCCTTGGTCGGCTTCTTCCTTTCACGCATG TTTATTATGCGATCCGCTTTTAACCCGCACCGACTCTGACCCAACCCGACCAGTAACCAGATGTAGTTGAGACTTGAGAGTAGAAAATATAACTAAGCACGTGACAAATTAAATTCTTCTTTGGCAACGCATATGCTTTGCTTAGAAATTACGAGGTGATACTCAACGGTTTGCAGCGTGTGTCGTTTGATTTCTGACGCAAAGTTGAGTCGGCGTTTTCTTACCATTTTTATAAACCCTACTTCTGCTCTTATCTTTTTAACTCCGTATATAATTTTCCCAATCCCCAGTTTTCTCAACAACTCCTATTTTCTCTCTCCTCTTTTCCGCCATTGTTCAGTTTTTTTGTGCTCCAATTTTGAGCCATTGTTTCGTCTTTTTGGGTTAAATTTTAGCGAATCAGATTCATAAAATTCCATCAAAAAGTTATATCGAAGCTTCAAATTGGTTGTGAATGGTGGAAATCTTAAGTAATAGTAATTACATGCGATCTTCCCCTTTCCTCTTCACAAGGGGGATCGTCGCTCACTCTCTCTCCTCTGCTTCTTCTTTCGCTTTCGGTTCTTGCATGGAAGGCTGGTACTACCGCTGCCTTGGCCTTGACCCGTAAATTAAATCCCCAAATTTACGATAGAGTTCAATCAATCAATTCTTCAATCTGGAAAATTTTGAAATTATTATTTTTGATTTGAGAAAACAAATCCTCTGTTTTTATTTTATTATAAATCAATTTTTTTGATCTGAAATTGAGTTATTGTTTTTTATTTGAGAGATATTTTTAAAAAAAAACAAAATCGGCAAAAAAAAATGTTGCTAAGCAAGCAGAAGAAGGCGAAGGGTAATCGGGTGTTGATAACTGTTAACGTGGTTGGAAGTGCGGGCCCTCTGAGGTTTGTGGTGAATGAAAGGGAGATTGTGGCAGCTGTGATTGATATGGCGTTGAAATCTTATGCTCGCGAAGGTCGTCTTCCTGTTCTTGGCTCGAATCTCAATGATTTCCTTCTTTACTGCCCTATTGCCGGATCAGATGCTTTAAGTCCTATTGAGACGATTGGAGCTCATGGTGCCCGGAATTTCCTTCTGTGTAAGAAGCCGCAGCCTCAGACTCAGACAGAGAAAGCTGCAAAGGTTAAGGGTGATGCTGTTACCACTGAAGCTTCTATTACAAGAAGGGGAAATGGAAGCTGGAAGTCGTGGATCAATAAGACCCTCATTCTTAAAGTTGCCTCTCATTAAAGATGGATTTTATACAGACTGCTTCTCTGGATCCTAAGGCGATGATTAGTCTTGCAACTGTTGTAAGAGATTTAATTATGCCCATTTAACTACTTGTTATTATCATACCCATTTCATTTGTTGAATTGTATGGGAAGGATTTTCTACAGAAAAACCGATTGATTTTTATTTTTTCCTTTTTTCTTTTGTCATTTGAAAGCAATAGTTTTTACGTCTATTGTGGATCATTGAGAATTCAATAAAGTTCTACTACCTTTATATTTTTATTAACGATGTATGGTGTTCGGATGCGACTAGGGGTTCGGAAGACTCCTTGGTCGGCTTCTTCCTTTCACGCATG ATGTTGCTAAGCAAGCAGAAGAAGGCGAAGGGTAATCGGGTGTTGATAACTGTTAACGTGGTTGGAAGTGCGGGCCCTCTGAGGTTTGTGGTGAATGAAAGGGAGATTGTGGCAGCTGTGATTGATATGGCGTTGAAATCTTATGCTCGCGAAGGTCGTCTTCCTGTTCTTGGCTCGAATCTCAATGATTTCCTTCTTTACTGCCCTATTGCCGGATCAGATGCTTTAAGTCCTATTGAGACGATTGGAGCTCATGGTGCCCGGAATTTCCTTCTGTGTAAGAAGCCGCAGCCTCAGACTCAGACAGAGAAAGCTGCAAAGGTTAAGGGTGATGCTGTTACCACTGAAGCTTCTATTACAAGAAGGGGAAATGGAAGCTGGAAGTCGTGGATCAATAAGACCCTCATTCTTAAAGTTGCCTCTCATTAA MLLSKQKKAKGNRVLITVNVVGSAGPLRFVVNEREIVAAVIDMALKSYAREGRLPVLGSNLNDFLLYCPIAGSDALSPIETIGAHGARNFLLCKKPQPQTQTEKAAKVKGDAVTTEASITRRGNGSWKSWINKTLILKVASH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17775.1 vs. NCBI nr
Match: gi|902190085|gb|KNA11536.1| (hypothetical protein SOVF_134120 [Spinacia oleracea]) HSP 1 Score: 279.3 bits (713), Expect = 3.900e-72 Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1
BLAST of Spo17775.1 vs. NCBI nr
Match: gi|731341400|ref|XP_010681883.1| (PREDICTED: uncharacterized protein LOC104896789 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 225.7 bits (574), Expect = 5.100e-56 Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = 1
BLAST of Spo17775.1 vs. NCBI nr
Match: gi|596205660|ref|XP_007223777.1| (hypothetical protein PRUPE_ppa013143mg [Prunus persica]) HSP 1 Score: 194.9 bits (494), Expect = 9.600e-47 Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1
BLAST of Spo17775.1 vs. NCBI nr
Match: gi|645229338|ref|XP_008221421.1| (PREDICTED: uncharacterized protein LOC103321407 [Prunus mume]) HSP 1 Score: 193.7 bits (491), Expect = 2.100e-46 Identity = 100/146 (68.49%), Postives = 119/146 (81.51%), Query Frame = 1
BLAST of Spo17775.1 vs. NCBI nr
Match: gi|1009155043|ref|XP_015895502.1| (PREDICTED: uncharacterized protein At4g22758-like [Ziziphus jujuba]) HSP 1 Score: 192.6 bits (488), Expect = 4.700e-46 Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 1
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134120 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.700e-72 Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3G9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144020 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.500e-56 Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = 1
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Match: M5XHL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013143mg PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 6.700e-47 Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QER4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G177100 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 7.400e-46 Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = 1
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Match: A0A059D744_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02935 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 9.600e-46 Identity = 100/145 (68.97%), Postives = 115/145 (79.31%), Query Frame = 1
BLAST of Spo17775.1 vs. TAIR (Arabidopsis)
Match: AT1G70780.1 (unknown protein) HSP 1 Score: 152.1 bits (383), Expect = 2.500e-37 Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 1
BLAST of Spo17775.1 vs. TAIR (Arabidopsis)
Match: AT1G23150.1 (unknown protein) HSP 1 Score: 149.8 bits (377), Expect = 1.200e-36 Identity = 78/144 (54.17%), Postives = 102/144 (70.83%), Query Frame = 1
BLAST of Spo17775.1 vs. TAIR (Arabidopsis)
Match: AT5G37730.1 (unknown protein) HSP 1 Score: 94.7 bits (234), Expect = 4.800e-20 Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of Spo17775.1 vs. TAIR (Arabidopsis)
Match: AT2G01554.1 (unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 3.900e-6 Identity = 40/138 (28.99%), Postives = 63/138 (45.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17775.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17775.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17775.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17775.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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