Spo17788 (gene) | SpinachBase

Overview


Name	Spo17788
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Receptor-like kinase
Location	chr1 : 7113809 .. 7115031 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGGAGTTACAATCATCATAGGTCTGTATCTATTGCTATGGGGCAAAGCAAAAGATCGAGAAGTCAGCATCACATATGAGAAGAAACCATCTATGTATGCCATCAAGCAGAATGAACCGAAGATGCAAATAGTGACAGTGATAGAAAGGGAGTCACTGAATCACTAACTGAAAACTGCAAGGTGGAAAGAATCCTTATGATTCACCTGACATGAAGGTATTCAGTTTCAAAGAAATTACAGCAGCCACAAATAATTTTTCATTTTACAAGAAGCTTAGAGAGGGTGGGTATGGACCGGTTTATAAGGTATCCTTCAAAATCAATACCAAGTACATTTCCCTCACCACTTAAACAAACACAGCATATATGATACATATATCTGTTTCTCCAGGGTAAATTAAAGACAGGGCAGGAAATAGCAGTAAAGAGACTTTCAAAAGCTTCAAGGTAAGGATTTGAGCAGTTCAAGAATGAAGTTATGCTCACTGCAAAACTTCAGCATGTAAACTTGGTTAAGGTGCTGGGATTTTGCGTGGAAAGAGAGGAAGAAATGCTCATTTATGAATACCTTGCAATTAGCAGCTTGGATTTCTACCTTTTTGGTATAACTTTTGCTTGACTGTGTTCTATGATGATATAAAATCTAGCTCACGAACAAAGACATGAGCACGTACATAACATTCTGGCAGCTGATAGATTCCTTTCCCCGTCTCTTAGCAGATCTTGTGGAACGTTTGCAGCTCAATTGGGGAAAGCGTGCTCACATCATCAAAAAGAATAATTCAAGGCCTCCTATACCTGCAAGAATACTCAAGGCTAACCATCATTCACTCAAATCTAAAAGCCAATAATATTTTACTTGACAAAGATTTAAATCCTAAGATATCAGACTTTGGCATGGCAAGAATATTCCAAAAGGATGGATATGAAGCAAACACAAGCAGAATTGTGGGAACATAATGAGTATATAGTTTTGCTTGCATTCTTGTTATACACTAATTATTTAGGTTATACTCAAACATATTAATCATATTCTGGCAGTGGATATGTTCCTCCGGAGTACGTGAAACAAGGAGTATACTCCAGAAAACATGATGTTTATAGCTTTGGAGTGCTGCTGCTACAAATCATCAGTGGGAAGACGAATAGCCAATTCTATGGTGTTAATGAAGAAAACCTCTTGGAGTATGTAAGTAACTGCACGTACCCAGCTAATTGA

mRNA sequence

ATGGTAGGAGTTACAATCATCATAGGTCTGTATCTATTGCTATGGGGCAAAGCAAAAGATCGAGAAGTCAGCATCACATATGAGAAGAAACCATCTATGTATGCCATCAAGCAGAATGAACCGAAGATGCAAATAGTGACAGGTAAATTAAAGACAGGGCAGGAAATAGCAGTAAAGAGACTTTCAAAAGCTTCAAGTGGATATGTTCCTCCGGAGTACGTGAAACAAGGAGTATACTCCAGAAAACATGATGTTTATAGCTTTGGAGTGCTGCTGCTACAAATCATCAGTGGGAAGACGAATAGCCAATTCTATGGTGTTAATGAAGAAAACCTCTTGGAGTATGTAAGTAACTGCACGTACCCAGCTAATTGA

Coding sequence (CDS)

ATGGTAGGAGTTACAATCATCATAGGTCTGTATCTATTGCTATGGGGCAAAGCAAAAGATCGAGAAGTCAGCATCACATATGAGAAGAAACCATCTATGTATGCCATCAAGCAGAATGAACCGAAGATGCAAATAGTGACAGGTAAATTAAAGACAGGGCAGGAAATAGCAGTAAAGAGACTTTCAAAAGCTTCAAGTGGATATGTTCCTCCGGAGTACGTGAAACAAGGAGTATACTCCAGAAAACATGATGTTTATAGCTTTGGAGTGCTGCTGCTACAAATCATCAGTGGGAAGACGAATAGCCAATTCTATGGTGTTAATGAAGAAAACCTCTTGGAGTATGTAAGTAACTGCACGTACCCAGCTAATTGA

Protein sequence

MVGVTIIIGLYLLLWGKAKDREVSITYEKKPSMYAIKQNEPKMQIVTGKLKTGQEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEENLLEYVSNCTYPAN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17788.1	Spo17788.1	mRNA

Homology

[Close]

BLAST of Spo17788.1 vs. NCBI nr
Match: gi|1009110018|ref|XP_015893293.1| (PREDICTED: putative cysteine-rich receptor-like protein kinase 35 isoform X3 [Ziziphus jujuba])

HSP 1 Score: 81.6 bits (200), Expect = 1.000e-12
Identity = 38/50 (76.00%), Postives = 46/50 (92.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYV++G+YS K+DVYSFGVLLLQIISGK +++FYGVNE  NLLE+
Sbjct: 531 GYVPPEYVRKGIYSMKYDVYSFGVLLLQIISGKRSTRFYGVNERLNLLEF 580

[Close]

BLAST of Spo17788.1 vs. NCBI nr
Match: gi|1009110012|ref|XP_015893268.1| (PREDICTED: putative cysteine-rich receptor-like protein kinase 20 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 81.6 bits (200), Expect = 1.000e-12
Identity = 38/50 (76.00%), Postives = 46/50 (92.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYV++G+YS K+DVYSFGVLLLQIISGK +++FYGVNE  NLLE+
Sbjct: 631 GYVPPEYVRKGIYSMKYDVYSFGVLLLQIISGKRSTRFYGVNERLNLLEF 680

[Close]

BLAST of Spo17788.1 vs. NCBI nr
Match: gi|1009110016|ref|XP_015893285.1| (PREDICTED: putative cysteine-rich receptor-like protein kinase 35 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 81.6 bits (200), Expect = 1.000e-12
Identity = 38/50 (76.00%), Postives = 46/50 (92.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYV++G+YS K+DVYSFGVLLLQIISGK +++FYGVNE  NLLE+
Sbjct: 548 GYVPPEYVRKGIYSMKYDVYSFGVLLLQIISGKRSTRFYGVNERLNLLEF 597

[Close]

BLAST of Spo17788.1 vs. NCBI nr
Match: gi|595817054|ref|XP_007204154.1| (hypothetical protein PRUPE_ppa019682mg [Prunus persica])

HSP 1 Score: 81.3 bits (199), Expect = 1.300e-12
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1

		  
Query: 51  KTGQEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE 110
           K  QE    R+   + GYVPPEYVK+G+YS K DVYSFGVLL+QIISGK N+ FYG NE+
Sbjct: 598 KDEQEANTSRIV-GTYGYVPPEYVKKGLYSTKSDVYSFGVLLVQIISGKKNAAFYGPNED 657

Query: 111 -NLLEY 116
            NLLEY
Sbjct: 658 LNLLEY 662

[Close]

BLAST of Spo17788.1 vs. NCBI nr
Match: gi|645275682|ref|XP_008242937.1| (PREDICTED: cysteine-rich receptor-like protein kinase 5 isoform X1 [Prunus mume])

HSP 1 Score: 80.9 bits (198), Expect = 1.800e-12
Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 1

		  
Query: 51  KTGQEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE 110
           K  QE    R+   + GYVPPEYVK G+YS K DVYSFGVLL+QIISGK N+ FYG NE+
Sbjct: 616 KDEQEANTSRIV-GTYGYVPPEYVKNGLYSTKSDVYSFGVLLVQIISGKKNAAFYGPNED 675

Query: 111 -NLLEY 116
            NLLEY
Sbjct: 676 LNLLEY 680

[Close]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Match: M5W7W8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019682mg PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.400e-13
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1

		  
Query: 51  KTGQEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE 110
           K  QE    R+   + GYVPPEYVK+G+YS K DVYSFGVLL+QIISGK N+ FYG NE+
Sbjct: 598 KDEQEANTSRIV-GTYGYVPPEYVKKGLYSTKSDVYSFGVLLVQIISGKKNAAFYGPNED 657

Query: 111 -NLLEY 116
            NLLEY
Sbjct: 658 LNLLEY 662

[Close]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SL59_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G217500 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.600e-12
Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYVK G+YS K+DVYSFGVLLLQIISGK NS  YG +E  NLLEY
Sbjct: 591 GYVPPEYVKNGIYSTKYDVYSFGVLLLQIISGKRNSNLYGCHENLNLLEY 640

[Close]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Match: A0A061GJM8_THECC (Cysteine-rich RLK 34, putative isoform 1 OS=Theobroma cacao GN=TCM_037107 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.600e-12
Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYVK+G YS K+DVYSFGVLLLQI+SGK NS  YG NE  NLLEY
Sbjct: 619 GYVPPEYVKKGTYSMKYDVYSFGVLLLQIMSGKRNSSLYGCNENLNLLEY 668

[Close]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Match: W9S376_9ROSA (G-type lectin S-receptor-like serine/threonine-protein kinase OS=Morus notabilis GN=L484_009237 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.100e-12
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GY+PPEY KQG+YS K DVYSFGVLLLQIISGK NS FYG NE+ +LLEY
Sbjct: 270 GYIPPEYAKQGLYSTKSDVYSFGVLLLQIISGKINSCFYGSNEDLSLLEY 319

[Close]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Match: A0A059CLC9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00384 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.100e-12
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE-NLLEY 116
           GYVPPEYV++G+YS K+D+YSFGVLLLQIISGK NS  YG+NE  NLLEY
Sbjct: 369 GYVPPEYVRKGIYSTKYDIYSFGVLLLQIISGKKNSCCYGLNENLNLLEY 418

[Close]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=3 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.100e-9
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1

		  
Query: 54  QEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFY--GVNEEN 113
           Q +A  +    + GY+PPEYV  G +S K DVYSFGVL+L+II GK N  FY      EN
Sbjct: 521 QSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAEN 580

Query: 114 LLEYV 117
           L+ YV
Sbjct: 581 LVTYV 585

[Close]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.400e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE--NLLEYV 117
           GY+PPEYV  G +S K DVYSFGVL+L+I+SG+ NS FY ++    NL+ YV
Sbjct: 516 GYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYV 567

[Close]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.800e-9
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE--NLLEYV 117
           GY+PPEYV  G +S K DVYSFGVL+L+I+ GK NS FY +++   NL+ +V
Sbjct: 496 GYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHV 547

[Close]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.000e-9
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVN--EENLLEYV 117
           GY+ PEYV  G +S K DVYSFGVL+L+IISGK NS FY ++    NL+ YV
Sbjct: 506 GYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYV 557

[Close]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.000e-9
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVN--EENLLEYV 117
           GY+ PEYV  G +S K DVYSFGVL+L+IISGK NS FY ++    NL+ YV
Sbjct: 526 GYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYV 577

[Close]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Match: AT4G23200.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 12)

HSP 1 Score: 64.3 bits (155), Expect = 6.000e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1

		  
Query: 54  QEIAVKRLSKASSGYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFY--GVNEEN 113
           Q +A  +    + GY+PPEYV  G +S K DVYSFGVL+L+II GK N  FY      EN
Sbjct: 479 QSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAEN 538

Query: 114 LLEYV 117
           L+ YV
Sbjct: 539 LVTYV 543

[Close]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Match: AT4G11460.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 30)

HSP 1 Score: 63.9 bits (154), Expect = 7.800e-11
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE--NLLEYV 117
           GY+PPEYV  G +S K DVYSFGVL+L+I+SG+ NS FY ++    NL+ YV
Sbjct: 516 GYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYV 567

[Close]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Match: AT4G11480.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 32)

HSP 1 Score: 63.5 bits (153), Expect = 1.000e-10
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVNEE--NLLEYV 117
           GY+PPEYV  G +S K DVYSFGVL+L+I+ GK NS FY +++   NL+ +V
Sbjct: 496 GYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHV 547

[Close]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Match: AT4G23260.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 18)

HSP 1 Score: 62.4 bits (150), Expect = 2.300e-10
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVN--EENLLEYV 117
           GY+ PEYV  G +S K DVYSFGVL+L+IISGK NS FY ++    NL+ YV
Sbjct: 506 GYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYV 557

[Close]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Match: AT4G23250.1 (kinases;protein kinases)

HSP 1 Score: 62.4 bits (150), Expect = 2.300e-10
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1

		  
Query: 67  GYVPPEYVKQGVYSRKHDVYSFGVLLLQIISGKTNSQFYGVN--EENLLEYV 117
           GY+ PEYV  G +S K DVYSFGVL+L+IISGK NS FY ++    NL+ YV
Sbjct: 521 GYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYV 572

The following BLAST results are available for this feature:

BLAST of Spo17788.1 vs. NCBI nr
BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
BLAST of Spo17788.1 vs. TAIR (Arabidopsis)

BLAST of Spo17788.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|1009110018\|ref\|XP_015893293.1\|	1.0e-12	76.0	PREDICTED: putative cysteine-r...	[more]
gi\|1009110012\|ref\|XP_015893268.1\|	1.0e-12	76.0	PREDICTED: putative cysteine-r...	[more]
gi\|1009110016\|ref\|XP_015893285.1\|	1.0e-12	76.0	PREDICTED: putative cysteine-r...	[more]
gi\|595817054\|ref\|XP_007204154.1\|	1.3e-12	65.1	hypothetical protein PRUPE_ppa...	[more]
gi\|645275682\|ref\|XP_008242937.1\|	1.8e-12	65.1	PREDICTED: cysteine-rich recep...	[more]

BLAST of Spo17788.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
M5W7W8_PRUPE	9.4e-13	65.1	Uncharacterized protein OS=Pru...	[more]
A0A0D2SL59_GOSRA	1.6e-12	78.0	Uncharacterized protein OS=Gos...	[more]
A0A061GJM8_THECC	1.6e-12	78.0	Cysteine-rich RLK 34, putative...	[more]
W9S376_9ROSA	2.1e-12	78.0	G-type lectin S-receptor-like ...	[more]
A0A059CLC9_EUCGR	2.1e-12	76.0	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo17788.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
CRK12_ARATH	1.1e-9	50.7	Putative cysteine-rich recepto...	[more]
CRK30_ARATH	1.4e-9	57.6	Putative cysteine-rich recepto...	[more]
CRK32_ARATH	1.8e-9	55.7	Putative cysteine-rich recepto...	[more]
CRK18_ARATH	4.0e-9	59.6	Cysteine-rich receptor-like pr...	[more]
CRK17_ARATH	4.0e-9	59.6	Cysteine-rich receptor-like pr...	[more]

BLAST of Spo17788.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G23200.1	6.0e-11	50.7	cysteine-rich RLK (RECEPTOR-li...	[more]
AT4G11460.1	7.8e-11	57.6	cysteine-rich RLK (RECEPTOR-li...	[more]
AT4G11480.1	1.0e-10	55.7	cysteine-rich RLK (RECEPTOR-li...	[more]
AT4G23260.1	2.3e-10	59.6	cysteine-rich RLK (RECEPTOR-li...	[more]
AT4G23250.1	2.3e-10	59.6	kinases;protein kinases	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	PFAM	PF07714	Pkinase_Tyr	coord: 55..117 score: 2.
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 62..120 score: 7.87
None	No IPR available	GENE3D	1.10.510.10		coord: 62..122 score: 1.8
None	No IPR available	PANTHER	PTHR27002	FAMILY NOT NAMED	coord: 48..115 score: 3.8
None	No IPR available	PANTHER	PTHR27002:SF1	SUBFAMILY NOT NAMED	coord: 48..115 score: 3.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0032940	secretion by cell
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0030091	protein repair
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010218	response to far red light
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006457	protein folding
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0010200	response to chitin
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0010114	response to red light
biological_process	GO:0052542	defense response by callose deposition
biological_process	GO:0006412	translation
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0042432	indole biosynthetic process
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0044375	regulation of peroxisome size
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0016049	cell growth
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0007030	Golgi organization
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006032	chitin catabolic process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0007033	vacuole organization
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005779	integral component of peroxisomal membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005829	cytosol
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0016844	strictosidine synthase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10316	0.90	Barchart \| Table
Spo21496	0.74	Barchart \| Table
Spo09769	0.74	Barchart \| Table
Spo25876	0.74	Barchart \| Table
Spo02513	0.74	Barchart \| Table
Spo11509	0.72	Barchart \| Table
Spo27081	0.71	Barchart \| Table
Spo05125	0.70	Barchart \| Table
Spo05135	0.70	Barchart \| Table
Spo02486	0.69	Barchart \| Table
Spo00283	0.69	Barchart \| Table
Spo23332	0.69	Barchart \| Table
Spo02482	0.69	Barchart \| Table
Spo06670	0.69	Barchart \| Table
Spo14944	0.69	Barchart \| Table
Spo25483	0.68	Barchart \| Table
Spo05781	0.68	Barchart \| Table
Spo11524	0.68	Barchart \| Table
Spo13583	0.68	Barchart \| Table
Spo15873	0.68	Barchart \| Table
Spo23757	0.68	Barchart \| Table
Spo24068	0.68	Barchart \| Table
Spo27352	0.68	Barchart \| Table
Spo09752	0.67	Barchart \| Table
Spo26013	0.67	Barchart \| Table
Spo26834	0.67	Barchart \| Table
Spo14881	0.67	Barchart \| Table
Spo15499	0.67	Barchart \| Table
Spo16804	0.67	Barchart \| Table
Spo19874	0.67	Barchart \| Table
Spo23588	0.67	Barchart \| Table
Spo00369	0.67	Barchart \| Table
Spo09499	0.67	Barchart \| Table
Spo09554	0.66	Barchart \| Table
Spo08271	0.66	Barchart \| Table
Spo20050	0.66	Barchart \| Table
Spo22998	0.66	Barchart \| Table
Spo00498	0.66	Barchart \| Table
Spo05227	0.66	Barchart \| Table
Spo27364	0.66	Barchart \| Table
Spo04653	0.66	Barchart \| Table
Spo10864	0.66	Barchart \| Table
Spo11196	0.66	Barchart \| Table
Spo04433	0.66	Barchart \| Table
Spo11668	0.66	Barchart \| Table
Spo13029	0.66	Barchart \| Table
Spo17497	0.66	Barchart \| Table
Spo17612	0.66	Barchart \| Table
Spo04383	0.65	Barchart \| Table
Spo05640	0.65	Barchart \| Table
Spo15782	0.65	Barchart \| Table
Spo26858	0.65	Barchart \| Table
Spo06919	0.65	Barchart \| Table
Spo13393	0.65	Barchart \| Table
Spo00205	0.65	Barchart \| Table
Spo24331	0.65	Barchart \| Table
Spo00362	0.65	Barchart \| Table
Spo20544	0.65	Barchart \| Table
Spo21446	0.65	Barchart \| Table
Spo01261	0.65	Barchart \| Table