Spo17851 (gene) | SpinachBase

Overview


Name	Spo17851
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Single-stranded DNA-binding protein WHY1, chloroplastic (Protein WHIRLY 1) (ZmWHY1) (Precursor)
Location	chr2 : 54878184 .. 54884425 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGAGAATAGACTTCCTAAATCAGTGAATCACCCTTCTCTCCGAAAACATTTTCAAAATCGTATTTTACATTTCTTCCAGAATCTAGACAGTCGAGTATTCTCACTCTTCCCGCTGAAAATCCCCTCTTGCTGCATCCTGCAGACTTTTCCCAAATTTGCTAGCAAAGATGATGAAACTCGCCACCATTTTCAAGTCCAGGTTTACTATCTTCCTTCGCCTAACTTCTACCTTCGCATTTATTAATTTCACTAGGGTTCTTCCGTTGATTTGTCCCCTTTCTTAATCGTCTTTTCAATTTATTTGTACCCCCAATTAACTGCTTTTAGGGTTTTGTTTTGATTTTCTATTTGTTGTTGCATGACCCTGTAAATTGACTACATTTTGGTCGAACTGAAAGTGCATTTCGCTGTTTTTATTAAGCATTGATTTTAACAGTCTTGCTGCTTGCGGACTAGAGTTTATGTGAATAATTTGTGGGTAATGTTGATTGCTAAAGGGGGATGAAAATTTTCGAATTTTGCATTTGTTGTTGCTATGGTAAATATGATGTTCTATCGGGTGGAATTTCTTAGCCTGTTTTGTGTTGGTTGGGTGTACATTATGGGCTTAAAGTGCTTGAAGAGGGTTGTATACTTTGTGTTGATGGTAAAGCTGGTTTTGGAATACATTTCGCCGAAAAAATGGGTTTGTGAATAGACCTTCATATTTGGATCATTCAATCGGGGAGAAATTGGTTTCAGCTTAAATTACTTCTGCTAATAAGAATTATTTAGAAAATGGTTGCAGATAAAGAAAAAGTTAGTACTTATTCTAATGAACTTATAGTATAGAGTAGAATTTTGTTCATACCCTTTTCTTCAGATTTATTAGATGTACTTTCCCAACATAGTATTAAGATCAAGTGGAAGGAAACCATGATCTTAATCGTATAGAGCTTTGCTTTGGCACTGTTGTCAGGGCTTCATTTGTTAGTGAATGAGCTATTCATATGGATGAGGATGCCAAAGTAAAATAATTTGTTTGGTTCTGTATTTTTTAAATGACACTTACTTTGTTTTCTTAAACAAGGGGGAATGTTTCTGGGCAATTCCTCAACTGGAGTAATCCTACGCAAGATGTTTTTAGCTTGCACGCTTTGATGAGCCGTGCCAGCATGTCTACAGTTGGACAGAAGGGAAATAACGCTGGTAATGACATATTGACATTACCGTTTTTTTTTTCTTGAACATTGTATTGTTGCACATTTAGATCTCTACGTCCTCTCATGCTTTCGGGATTTGTGTTCTACTACTGCAGATCGCATTTATGCAGCATACTCTGTGTACAAGGGAAAAGCAGCACTTTCTGCTCATCCTGTTCCAGCAACATTTAGTAAAGTTGATGTATGAATATAAGCTGTTAATCATTCTTGATTATTTTTTGCTAGGGTAATTAGTAATATATTTGCTTGATTACCTTTTGTGCAGTCTGGAGGTGTCAAAGTTAAGCGTCAGGGCTATATTATGTTGTCTTTTTCTCCTTGTGTAGGAGAGCGCAAGTACGACTGGCAGAGGAAGCAGGTAAAATTGCTTGTTCTGCTGTCTATTTATTTACTTCTGTGCTTGTATACACAACACCTCTTTCTCTCCGCTAAGATAAAGTCTCGTAAGTTAGTATCATACAAGACAACCTTTTTCTGCTATAGGCTATATGTTTGTAATTTATCATAGTATGTTATTAGTTTAGTGGATGATAAATGTAGTACTCCGTACATTCTTACTAGTTTCCAGTCTTCATAGATCTGCATTGCCTGAATTACAGGCTTGTTCTTCAGTCTTCACTTTGGATGTCGTCTTAAAGTGCTGTCCGTATATTTCCTTTTTATACTTGGTTTCCGCTTTTGGATGTTTCATTTCTGAGATTATGCATACGAATCCCCTAACGTTTGATAAGTTTATTCAGTTATCTTATCGAAGATACCTTTTTTGGGCTGCAGTTAAGAATGAAACAGGGTTTTAAATCGTGGCCGCTGTCTGGTTCACAATGTTAGTTGTGCTCATCTTGAACGCATATATATTATTGCGGTGTCTCGTAAATAATTTTGGTCGATGCAGCATGAGTTTTATATCAGTCGTATTGGCAATTTCACCCTGTAACTGGCCTGTTGTCATTGTGAATATGTCAATGTCCTTAATCACTGGGTTAATATTTGTTTGACGAGCTGAAAAATAGATCATATTGGCCATGATTTTTGAAATCGGTCATTGTGTAAATAATTGTATGGATCAGAGGGGAGATATAGATATACTGATCTTCCTATCTTCAAGAGCGTTGTTACTTGAATTATAGATGCTAACCTTGGACTTAGACATGGTAGCTCAACTATTCTACTCTTTTAACATCTGTTATACGGCTTATACCATCTTGTATGCCTCAAAGTTACTTGTTTAGCTTCTTGGTTTCTGTTTAAGGTGAGCTATAGTAGCCAAGCTCCCTTTTCTAATTCATATTTATTCTTCTACCCCTTTATGTGTTTACTAGCTACTCTTTGTTCTGTTTCTTCAGGTGTTTGCTTTGTCAGTCACTGAGGTCGGTTCATTGCTTACCTTGGGTCCTAATAGCTCTGTTGATTTTTTCCATGATCCTGCTATCCAGACAAGGTTAAATTTTGTCATAAAACAGTGTTTCTGTTATGGTTTGCATGATCGCATCACTTAATAATCCTTACGCTTTATATTTCAGCAATGCTGGTCAAGTGCGAAAGGGATTATCAATAAAAGCAAATTCAGAGGGTACTGGTTATTTCTTTTCTATAAGTAAGTCTTTTTCCTACTAGATCTTTTCTTTCTACTCTCTTCCAAGTTTGGTTAGATGTACCTGAACAATTGAACATCTTATTGCCTCCTGATTCCTCTTTGATTGAATGTCATATTAATACTTTTTAAACTTAACGGTGGTAGTTTACAAGATTTAAACTCAGAAAAGGCAGTATTTTGATTATTGTTTTAAAAGGTATCCTGTACCGCCGTACTTGTTTTCAAAAAGTTCTATTTAGGTAGTTTTGAAGTAACTTCCCTTCTCAGTTTCTGTAGCTATTTGAGTGAATGCCTGAAATTGTACCTTGGATTGCAACAAGCCAGCAGTGAGTTAACATACTGTTTTTCTAATAATTTGATCTTTCTGTTCTCTCCTTTCTAGATGTTGCCAATAACATCACGAAGGTCAATGAGCGCTTTACTGTTCCCGTGACAAGTGCTGAATTTGCTGTCATGCGCACGTCATTCAGTGTATGAAATCCTAAACCTTCTTTAAAATTTCTTTACATTTTGTGTGTGTCTCTGTGTGTGTGTGTGGGAGGGAGGGTTGGGGGTATGTATCATCCCTTACATAATTATACCATACAGTTTTGACAATTTTGCACATTCCTCATTTTGAAATTTAGTGCTTGCTTCATTATGTTATTATTATAAGCTCAATCTTTGAAGGATAATTAGTGAACATCAGTAATAACATAAAAGGAAATGGGTATTTGCACATTACTAGCTTTGGAGTTAAAGGAATGACTTCTAACAATCCTTTCACCTCTGCATGCTTCTTCTTCTTCCTCTGCATCTTGTCCTTGAAATTTGTTTGATGCGGGTAGAATGATTTGTGCATTAGGGGGCCAAAGGGTCTTCTTGTACACCATTTAATTTGTTGCCTTGTGGAACAATACCCATATGCTGTCCAAATCTTATTTGAGGACGTGATCCAAGATTTATTCATCAAGGACTTTTAAGGCTGGTCCGTACTTTGACCAATAAAATATAGTGATTAATGAGGGAAGGTCTAATAGCTTCGCCATTTATGAGTGCTGCTATTTCACCAAACACTTCCGACTCAACGACGTTCTATTGATGATGGATGTAGAATTGTATCTTAGCACCTAACACCTGTAGGCTGCAACAAAGCAACTTCTATATTAATTAGTTAATTACTGCCAAAGCTAGCGCCTTCAATTATTCTTGACTTTCTTCCTTGATCACTTATCATCCTCAAGCTCGTCTGTCCCAGCCAGAACCGAGTTATGGCTCCTTTATCACTTCTAATTGGTGCTTGGCTGAACATGTTTGTGTCAAAATTTAGGTGCTTAAAATTAGAACCTCTGTGTTGTTGACGAATTACATTGAAGGATATACTTACTGCCCCTGCAGCATTCCCCTCCTCCCCCTTTGGTGTAAGTTGTTTCTTGAAAGCTGGGTTATGCTCTGAACGGACTGAAACTACACTTAATATATTTATTTTCTTTTCTTAAGGGTAAGGTTGGAGCCTTGTGCACTGGTACAACCTTTTTCCCCCCTTTATAAGGGGAGGAGGTATTAAGTTGCAGTTGGGCCTAGGTGATGTAAATGTATAATGGTAACCATTCGCGATGGACTGATAGGTTTTCCATATTGGTGCTTAGTGTGCTAAGGAGATCTGGTAGTGTGGTTTAGGATTAGGAGATTGATAGTATATATGGGACTGAGAGGTATTGCGAGGACCTCTTTGTTAATCCCAGAGATTAACAAGTCTTCATCCAAGTTAAAGTAATAATAGTTGACATTTTTGTTACTTTGCTCCTTTTTCTGAGAGAATTTCCTACTTCCCCCTTATCACAATATTCAACCCTTTATCCTTGGAATTGGAATTTTATCCTTGGAATTGGAATTCGCAATCCAATCCCTGAAATTTAACCTATCATCCCCTGGAGTTTGCAGTGTTAGTAGGGCTAGTTGGTGCATTCTGACCATTCACGACAGATTACAGCTTCGCGAGACCTTTCAGAAATGTGTGTGCGTGGGGCGGGTGGGGGGGTGGGTGGGTGGGGTGAGAGGTGTTTGGAGAAGGATTTTTTCTCCTTAGATTATTTGTTTGGGGAAACTTTCAGACTTGCACTTTCTGGTTATCACGTCCATTGCTGTCAACTTTATAGAATGTTGACACCTTGTTTTAGGTGGCCTGTAAATAATGGGAAGAAACCACTAGCAACAAGTTTATGAATTTCTTAGATCTCATTTTTTTTTGTTGATATTAACTTATGTAGACAATAGTATTCATAAACAATTGTTAAAGGTTTTTGTTTTAAAAAATTGTTGGAAGTAGTAGTTTGTAAAATAAGGAACTTGATGATGTTGGATACAACAATAAAAACTTGAGTACTAGAAAAAGATTCCCTTATTTCTTCATTGCTAGTTTAGTCATGACAAGAAACCAAGTCTTCTTTTGTGCTCCTTCAATACTATCCCTTGAACTAAATTACCCCTTCCTAGTTCCTCTCCAGCACTTAACCCCTTGCCACCTCGCCTGAAGGTGGGGGAAGAAAAGTATGATAGACATGTGAATTTCCAGAGTGGTGGAACGAGATACTCCTCATTTCTCTTCCATTCTGAGTATAGTAGAAACTAATACTGGAAAGTGTTCAACAACTAGTGACTGTTCTAGTATTTGGTAATACTCATCAACTGAGTGGCTGGTTGTTCAGTAGCATGCACCTATTTTTTGGCACATATTATTGTTACTCTATATGCTTCTTCTTGACGTTGACATGGCTTGTTTTTGTAGTCTGTGTTTTCCCACATTACCTATTTTTTGGCACATATTATTGTTACTATATCTGCTTCTTCTTGCCTTTGACATGGCTTGTTTTTGTAGCCTGTGTTGCCCCACATTACCTATTTTTTTGGCACATATTATTGTTAACTATATCAGCTTCTTCTTTCCTTTGACATGGCTTGTTTTTGTAGTCTGTGTTGCCCCACATAATGGGTTGGGATCGGTACTCCTATCAGCCGCCTGTTCTTAAGGAGGAAAATTCAGTGAAAGTTGGTATGCGAAGCTTGGATTCAGAATGGGACAGATGAATTAAGAGTCAGTAAAAACTGTTGAAGATTGAATCTTTCGTATACAATACCGGTCAACTTTTCTTTTTGTAAGGAAGGCCTTTTGCAAACACCTGGAAGATGAAAAGAGTTTGTTAGGAGTATCTTAGAATTGCCAGTTTGTATGTAATCTTGTACTTAATTTTCCTGCCTGAAATTTACTACTTTCTTGTGCTTCTTCACTGACTTTTGTCGCCGTAAAACCTAAATTTGTACTTATTTGTGGTTTTAGTCGTTGAAAGATCAGTGTTATATGAACGACTATCGTTTGTAAGTGATGAATTTGGCTCGTTTGCAGCAGGTTATTGACACAAATTTTACCCTCTACATTTTAGTGACAAACAGCAAAATTGTTATGGA

mRNA sequence

AGTGAGAATAGACTTCCTAAATCAGTGAATCACCCTTCTCTCCGAAAACATTTTCAAAATCGTATTTTACATTTCTTCCAGAATCTAGACAGTCGAGTATTCTCACTCTTCCCGCTGAAAATCCCCTCTTGCTGCATCCTGCAGACTTTTCCCAAATTTGCTAGCAAAGATGATGAAACTCGCCACCATTTTCAAGTCCAGGGGGAATGTTTCTGGGCAATTCCTCAACTGGAGTAATCCTACGCAAGATGTTTTTAGCTTGCACGCTTTGATGAGCCGTGCCAGCATGTCTACAGTTGGACAGAAGGGAAATAACGCTGATCGCATTTATGCAGCATACTCTGTGTACAAGGGAAAAGCAGCACTTTCTGCTCATCCTGTTCCAGCAACATTTAGTAAAGTTGATTCTGGAGGTGTCAAAGTTAAGCGTCAGGGCTATATTATGTTGTCTTTTTCTCCTTGTGTAGGAGAGCGCAAGTACGACTGGCAGAGGAAGCAGGTGTTTGCTTTGTCAGTCACTGAGGTCGGTTCATTGCTTACCTTGGGTCCTAATAGCTCTGTTGATTTTTTCCATGATCCTGCTATCCAGACAAGCAATGCTGGTCAAGTGCGAAAGGGATTATCAATAAAAGCAAATTCAGAGGGTACTGGTTATTTCTTTTCTATAAATGTTGCCAATAACATCACGAAGGTCAATGAGCGCTTTACTGTTCCCGTGACAAGTGCTGAATTTGCTGTCATGCGCACGTCATTCAGTTCTGTGTTGCCCCACATAATGGGTTGGGATCGGTACTCCTATCAGCCGCCTGTTCTTAAGGAGGAAAATTCAGTGAAAGTTGGTATGCGAAGCTTGGATTCAGAATGGGACAGATGAATTAAGAGTCAGTAAAAACTGTTGAAGATTGAATCTTTCGTATACAATACCGGTCAACTTTTCTTTTTGTAAGGAAGGCCTTTTGCAAACACCTGGAAGATGAAAAGAGTTTGTTAGGAGTATCTTAGAATTGCCAGTTTGTATGTAATCTTGTACTTAATTTTCCTGCCTGAAATTTACTACTTTCTTGTGCTTCTTCACTGACTTTTGTCGCCGTAAAACCTAAATTTGTACTTATTTGTGGTTTTAGTCGTTGAAAGATCAGTGTTATATGAACGACTATCGTTTGTAAGTGATGAATTTGGCTCGTTTGCAGCAGGTTATTGACACAAATTTTACCCTCTACATTTTAGTGACAAACAGCAAAATTGTTATGGA

Coding sequence (CDS)

ATGATGAAACTCGCCACCATTTTCAAGTCCAGGGGGAATGTTTCTGGGCAATTCCTCAACTGGAGTAATCCTACGCAAGATGTTTTTAGCTTGCACGCTTTGATGAGCCGTGCCAGCATGTCTACAGTTGGACAGAAGGGAAATAACGCTGATCGCATTTATGCAGCATACTCTGTGTACAAGGGAAAAGCAGCACTTTCTGCTCATCCTGTTCCAGCAACATTTAGTAAAGTTGATTCTGGAGGTGTCAAAGTTAAGCGTCAGGGCTATATTATGTTGTCTTTTTCTCCTTGTGTAGGAGAGCGCAAGTACGACTGGCAGAGGAAGCAGGTGTTTGCTTTGTCAGTCACTGAGGTCGGTTCATTGCTTACCTTGGGTCCTAATAGCTCTGTTGATTTTTTCCATGATCCTGCTATCCAGACAAGCAATGCTGGTCAAGTGCGAAAGGGATTATCAATAAAAGCAAATTCAGAGGGTACTGGTTATTTCTTTTCTATAAATGTTGCCAATAACATCACGAAGGTCAATGAGCGCTTTACTGTTCCCGTGACAAGTGCTGAATTTGCTGTCATGCGCACGTCATTCAGTTCTGTGTTGCCCCACATAATGGGTTGGGATCGGTACTCCTATCAGCCGCCTGTTCTTAAGGAGGAAAATTCAGTGAAAGTTGGTATGCGAAGCTTGGATTCAGAATGGGACAGATGA

Protein sequence

MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17851.1	Spo17851.1	mRNA

Homology

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BLAST of Spo17851.1 vs. NCBI nr
Match: gi|902149945|gb|KNA05359.1| (hypothetical protein SOVF_191110 [Spinacia oleracea])

HSP 1 Score: 471.5 bits (1212), Expect = 8.700e-130
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1


		  
Query: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60
           MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY
Sbjct: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60

Query: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120
           KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG
Sbjct: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120

Query: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180
           SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT
Sbjct: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180

Query: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR
Sbjct: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR 234

[Close]

BLAST of Spo17851.1 vs. NCBI nr
Match: gi|731312956|ref|XP_010677192.1| (PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 335.5 bits (859), Expect = 7.500e-89
Identity = 168/230 (73.04%), Postives = 191/230 (83.04%), Query Frame = 1


		  
Query: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60
           MMKLATIFKSRGNVSGQ LN  N TQD+F LHA MS A +STVGQ+    DRI+AAYSVY
Sbjct: 1   MMKLATIFKSRGNVSGQLLNRYNATQDLFGLHASMSCAGISTVGQQSFTNDRIFAAYSVY 60

Query: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120
           KGKAALSA PVP  FS V+ GG+KVKRQG+I+LSFSP VGERKYDWQRKQVFALS TEVG
Sbjct: 61  KGKAALSAEPVPPKFSTVNCGGMKVKRQGFILLSFSPSVGERKYDWQRKQVFALSATEVG 120

Query: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180
           SL+ LGP  S +FFHDPA+QTSNAGQVRK LSI+AN++G+GYF S++V N+I+K NERFT
Sbjct: 121 SLIALGPTGSCEFFHDPAMQTSNAGQVRKSLSIRANTDGSGYFMSLSVNNSISKTNERFT 180

Query: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDS 231
           VPVTSAEFAVMRTSFS  LPHIMGWDR   Q P   E+NS+  G+RS +S
Sbjct: 181 VPVTSAEFAVMRTSFSFALPHIMGWDRLISQLPSPNEQNSMNAGLRSSNS 230

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BLAST of Spo17851.1 vs. NCBI nr
Match: gi|568849092|ref|XP_006478304.1| (PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial isoform X1 [Citrus sinensis])

HSP 1 Score: 251.1 bits (640), Expect = 1.900e-63
Identity = 135/242 (55.79%), Postives = 172/242 (71.07%), Query Frame = 1


		  
Query: 1   MMKLA-TIFKSRGNVSGQFL-NWSNPTQDVFSLHALMSRASMSTVGQ----KGNNADRIY 60
           MMKL+ ++  SR  +S + L   +N  +D    H L+S+A MST G     KG+   RI+
Sbjct: 1   MMKLSRSLLSSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIF 60

Query: 61  AAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFAL 120
           A Y VYKGKAA S  PV  TF K+DSG +KVKR+G I+L+F+P +GERKYDW +KQ FAL
Sbjct: 61  APYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFAL 120

Query: 121 SVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITK 180
           S TEVGSLLT+GP  S +FFHDPA+ +SNAGQ+RK LSIKAN++  G+F S+NVANNI K
Sbjct: 121 SPTEVGSLLTMGPRDSSEFFHDPAMLSSNAGQMRKSLSIKANAD--GFFISLNVANNILK 180

Query: 181 VNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPP--VLKEENSVKVGMRSLDSEW 235
            NERF VPVT+AEFAVM+T+ S  LPH+MGWDR + Q P       +S KV  + L+ EW
Sbjct: 181 TNERFVVPVTTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLEW 240

[Close]

BLAST of Spo17851.1 vs. NCBI nr
Match: gi|641832358|gb|KDO51395.1| (hypothetical protein CISIN_1g026312mg [Citrus sinensis])

HSP 1 Score: 249.6 bits (636), Expect = 5.400e-63
Identity = 134/242 (55.37%), Postives = 172/242 (71.07%), Query Frame = 1


		  
Query: 1   MMKLA-TIFKSRGNVSGQFL-NWSNPTQDVFSLHALMSRASMSTVGQ----KGNNADRIY 60
           MMKL+ ++  SR  +S + L   +N  +D    H L+S+A MST G     KG+   RI+
Sbjct: 1   MMKLSRSLLSSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIF 60

Query: 61  AAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFAL 120
           A Y VYKGKAA S  PV  TF K+DSG +KVKR+G I+L+F+P +GERKYDW +KQ FAL
Sbjct: 61  APYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFAL 120

Query: 121 SVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITK 180
           S TEVGSLLT+GP  S +FFHDPA+ +SNAGQ+RK LSIKAN++  G+F S+NVANNI K
Sbjct: 121 SPTEVGSLLTMGPRDSSEFFHDPAMLSSNAGQMRKSLSIKANAD--GFFISLNVANNILK 180

Query: 181 VNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPP--VLKEENSVKVGMRSLDSEW 235
            NERF VPV++AEFAVM+T+ S  LPH+MGWDR + Q P       +S KV  + L+ EW
Sbjct: 181 TNERFVVPVSTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLEW 240

[Close]

BLAST of Spo17851.1 vs. NCBI nr
Match: gi|697178734|ref|XP_009598357.1| (PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 249.2 bits (635), Expect = 7.000e-63
Identity = 126/239 (52.72%), Postives = 169/239 (70.71%), Query Frame = 1


		  
Query: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQK-----GNNADRIYA 60
           ++KLA   + R  +  + L        ++  HA+ + A  STV Q      G    R++A
Sbjct: 3   ILKLAGFLRPRNQLLHKRLPGEGVRDSIWQ-HAINTLAGFSTVRQNIVADAGKLTGRVFA 62

Query: 61  AYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALS 120
            YSV+KGKAALSA P   TFSK+DSGGVK+ R+G IML+F P VGERKYDW+++Q+FALS
Sbjct: 63  PYSVFKGKAALSAEPRLPTFSKLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALS 122

Query: 121 VTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKV 180
            TEVGSL+++G   S +FFHDP++ +SNAGQVRK LS K N++G+GYF S++V NN  K 
Sbjct: 123 ATEVGSLISIGTRDSCEFFHDPSMLSSNAGQVRKSLSFKPNADGSGYFVSLSVVNNNLKT 182

Query: 181 NERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           N+RFTVPVT+AEFAVMRT+FS  LPHIMGWDR++ QP     ++  KV  + +++EWDR
Sbjct: 183 NDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNQPSESISQSPSKVVPQLMETEWDR 240

[Close]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDK6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191110 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.100e-130
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1


		  
Query: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60
           MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY
Sbjct: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60

Query: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120
           KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG
Sbjct: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120

Query: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180
           SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT
Sbjct: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180

Query: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR
Sbjct: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDSEWDR 234

[Close]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1A6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009820 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.200e-89
Identity = 168/230 (73.04%), Postives = 191/230 (83.04%), Query Frame = 1


		  
Query: 1   MMKLATIFKSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVY 60
           MMKLATIFKSRGNVSGQ LN  N TQD+F LHA MS A +STVGQ+    DRI+AAYSVY
Sbjct: 1   MMKLATIFKSRGNVSGQLLNRYNATQDLFGLHASMSCAGISTVGQQSFTNDRIFAAYSVY 60

Query: 61  KGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVG 120
           KGKAALSA PVP  FS V+ GG+KVKRQG+I+LSFSP VGERKYDWQRKQVFALS TEVG
Sbjct: 61  KGKAALSAEPVPPKFSTVNCGGMKVKRQGFILLSFSPSVGERKYDWQRKQVFALSATEVG 120

Query: 121 SLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFT 180
           SL+ LGP  S +FFHDPA+QTSNAGQVRK LSI+AN++G+GYF S++V N+I+K NERFT
Sbjct: 121 SLIALGPTGSCEFFHDPAMQTSNAGQVRKSLSIRANTDGSGYFMSLSVNNSISKTNERFT 180

Query: 181 VPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSLDS 231
           VPVTSAEFAVMRTSFS  LPHIMGWDR   Q P   E+NS+  G+RS +S
Sbjct: 181 VPVTSAEFAVMRTSFSFALPHIMGWDRLISQLPSPNEQNSMNAGLRSSNS 230

[Close]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Match: A0A067EBX1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026312mg PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.800e-63
Identity = 134/242 (55.37%), Postives = 172/242 (71.07%), Query Frame = 1


		  
Query: 1   MMKLA-TIFKSRGNVSGQFL-NWSNPTQDVFSLHALMSRASMSTVGQ----KGNNADRIY 60
           MMKL+ ++  SR  +S + L   +N  +D    H L+S+A MST G     KG+   RI+
Sbjct: 1   MMKLSRSLLSSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIF 60

Query: 61  AAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFAL 120
           A Y VYKGKAA S  PV  TF K+DSG +KVKR+G I+L+F+P +GERKYDW +KQ FAL
Sbjct: 61  APYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFAL 120

Query: 121 SVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITK 180
           S TEVGSLLT+GP  S +FFHDPA+ +SNAGQ+RK LSIKAN++  G+F S+NVANNI K
Sbjct: 121 SPTEVGSLLTMGPRDSSEFFHDPAMLSSNAGQMRKSLSIKANAD--GFFISLNVANNILK 180

Query: 181 VNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPP--VLKEENSVKVGMRSLDSEW 235
            NERF VPV++AEFAVM+T+ S  LPH+MGWDR + Q P       +S KV  + L+ EW
Sbjct: 181 TNERFVVPVSTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLEW 240

[Close]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HNQ1_SOLCH (Putative single-stranded DNA-bindig protein WHY2, mitochondrial-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.200e-61
Identity = 118/208 (56.73%), Postives = 158/208 (75.96%), Query Frame = 1


		  
Query: 32  HALMSRASMSTVGQK-----GNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVK 91
           HA+ + A  STV Q      G    R++A YSV+KGKAALSA P   TF+++DSGGV++ 
Sbjct: 31  HAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVRLN 90

Query: 92  RQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQ 151
           R+G IML+F P VGERKYDW+++Q+FALS TEVGSL+++G   S +FFHDP++ +SNAGQ
Sbjct: 91  RRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQ 150

Query: 152 VRKGLSIKANSEGTGYFFSINVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWD 211
           VRK LSIK N++G+GYF S++V NN  K N+RFTVPVT+AEFAVMRT+FS  LPHIMGWD
Sbjct: 151 VRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWD 210

Query: 212 RYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           R++ +P     ++  KV  + +++EWDR
Sbjct: 211 RFTNRPSESTSQSPSKVVPQLMEAEWDR 238

[Close]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Match: K4D8E0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.200e-61
Identity = 116/209 (55.50%), Postives = 155/209 (74.16%), Query Frame = 1


		  
Query: 26  QDVFSLHALMSRASMSTVGQKGNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKV 85
           Q+  +  A  S      V   G    R++A YSV+KGKAALSA P   TF+++DSGGVK+
Sbjct: 28  QNAINTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKL 87

Query: 86  KRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAG 145
            R+G IML+F P VGERKYDW+++Q+FALS TEVGSL+++G   S +FFHDP++ +SNAG
Sbjct: 88  NRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAG 147

Query: 146 QVRKGLSIKANSEGTGYFFSINVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGW 205
           QVRK LSIK N++G+GYF S++V NN  K N+RFTVPVT+AEFAVMRT+FS  LPHIMGW
Sbjct: 148 QVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGW 207

Query: 206 DRYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           DR++ +P     ++  KV  + +++EWDR
Sbjct: 208 DRFTNRPSESISQSPSKVVPQLMEAEWDR 236

[Close]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Match: WHY2_SOLTU (Single-stranded DNA-bindig protein WHY2, mitochondrial OS=Solanum tuberosum GN=WHY2 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.300e-64
Identity = 119/208 (57.21%), Postives = 158/208 (75.96%), Query Frame = 1


		  
Query: 32  HALMSRASMSTVGQK-----GNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVK 91
           HA+ + A  STV Q      G    R++A YSV+KGKAALSA P   TF+++DSGGVK+ 
Sbjct: 31  HAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLN 90

Query: 92  RQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQ 151
           R+G IML+F P VGERKYDW+++Q+FALS TEVGSL+++G   S +FFHDP++ +SNAGQ
Sbjct: 91  RRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQ 150

Query: 152 VRKGLSIKANSEGTGYFFSINVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWD 211
           VRK LSIK N++G+GYF S++V NN  K N+RFTVPVT+AEFAVMRT+FS  LPHIMGWD
Sbjct: 151 VRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWD 210

Query: 212 RYSYQPPVLKEENSVKVGMRSLDSEWDR 235
           R++ +P     ++  KV  + +++EWDR
Sbjct: 211 RFTNRPSESISQSPSKVVPQLMEAEWDR 238

[Close]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Match: WHY2_ARATH (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana GN=WHY2 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.300e-53
Identity = 106/235 (45.11%), Postives = 157/235 (66.81%), Query Frame = 1


		  
Query: 9   KSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNAD------RIYAAYSVYKG 68
           ++R  +S    + S    +  +L    S ++ ST G+     D      R++A YS++KG
Sbjct: 4   QARSLLSRSLCDQSKSLFEASTLRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKG 63

Query: 69  KAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSL 128
           KAALS  PV  +F+++DSG +++ R+G +M++F P +GERKYDW++KQ FALS TEVGSL
Sbjct: 64  KAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSL 123

Query: 129 LTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFTVP 188
           +++G   S +FFHDP++++SNAGQVRK LS+K +++G+GYF S++V N+I K N+ F VP
Sbjct: 124 ISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVP 183

Query: 189 VTSAEFAVMRTSFSSVLPHIMGWDRYS--YQPPVLKEENSVKVGMR-SLDSEWDR 235
           VT AEFAVM+T+FS  LPHIMGW+R +       L   N   +     L+ EWD+
Sbjct: 184 VTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 238

[Close]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Match: WHY1_MAIZE (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays GN=WHY1 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.800e-42
Identity = 78/162 (48.15%), Postives = 112/162 (69.14%), Query Frame = 1


		  
Query: 47  GNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDW 106
           G    R++ +YS+YKGKAALS  P P  F  +DSG  KV ++G+++L F+P V  R+YDW
Sbjct: 80  GAQDGRVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDW 139

Query: 107 QRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSI 166
            RKQVF+LSV E+G+LLTLGP  S +FFHDP    S  G+VRK L I+   +G G FF++
Sbjct: 140 TRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNL 199

Query: 167 NVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRY 209
           +V N +  V+E   +P+T  EFAV+ ++F+ ++PH+MGW  +
Sbjct: 200 SVQNRLINVDESIYIPITKGEFAVIVSTFNYIIPHLMGWSTF 241

[Close]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Match: WHY1_SOLTU (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum GN=WHY1 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.000e-42
Identity = 80/191 (41.88%), Postives = 126/191 (65.97%), Query Frame = 1


		  
Query: 46  KGNNADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYD 105
           +G +  +++  YS+YKGKAAL+  P    FS +DSG  K+ R+G +ML F+P  G R+YD
Sbjct: 85  QGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYD 144

Query: 106 WQRKQVFALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFS 165
           W RKQVF+LSVTE+GS+++LG   S +FFHDP    S+ G+VRK L ++   +G+G+FF+
Sbjct: 145 WSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFN 204

Query: 166 INVANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDR--YSYQPPVLKEENSVKV 225
           ++V N +  ++E   +PVT AEFAV+ ++F+ V+P+++GW     S++P      N+   
Sbjct: 205 LSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNAN- 264

Query: 226 GMRSLDSEWDR 235
                + EW+R
Sbjct: 265 PRSGAELEWNR 274

[Close]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Match: WHY1_ARATH (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana GN=WHY1 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.600e-41
Identity = 80/187 (42.78%), Postives = 125/187 (66.84%), Query Frame = 1


		  
Query: 52  RIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQV 111
           R Y  +S+YKGKAAL+  P    F  +DSG  K+ + G+++L F+P  G R+YDW +KQV
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 112 FALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANN 171
           F+LSVTE+G+L++LGP  S +FFHDP    S+ G+VRK L ++   +G+G+FF+++V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 172 ITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSL--- 231
           +  V+E   +P+T AEFAV+ ++F+ VLP+++GW  ++     +K E + +V   S    
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANS---IKPEETSRVNNASPNYG 259

Query: 232 -DSEWDR 235
            D EW+R
Sbjct: 260 GDYEWNR 263

[Close]

BLAST of Spo17851.1 vs. TAIR (Arabidopsis)
Match: AT1G71260.1 (WHIRLY 2)

HSP 1 Score: 211.1 bits (536), Expect = 7.500e-55
Identity = 106/235 (45.11%), Postives = 157/235 (66.81%), Query Frame = 1


		  
Query: 9   KSRGNVSGQFLNWSNPTQDVFSLHALMSRASMSTVGQKGNNAD------RIYAAYSVYKG 68
           ++R  +S    + S    +  +L    S ++ ST G+     D      R++A YS++KG
Sbjct: 4   QARSLLSRSLCDQSKSLFEASTLRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKG 63

Query: 69  KAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQVFALSVTEVGSL 128
           KAALS  PV  +F+++DSG +++ R+G +M++F P +GERKYDW++KQ FALS TEVGSL
Sbjct: 64  KAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSL 123

Query: 129 LTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANNITKVNERFTVP 188
           +++G   S +FFHDP++++SNAGQVRK LS+K +++G+GYF S++V N+I K N+ F VP
Sbjct: 124 ISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVP 183

Query: 189 VTSAEFAVMRTSFSSVLPHIMGWDRYS--YQPPVLKEENSVKVGMR-SLDSEWDR 235
           VT AEFAVM+T+FS  LPHIMGW+R +       L   N   +     L+ EWD+
Sbjct: 184 VTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 238

[Close]

BLAST of Spo17851.1 vs. TAIR (Arabidopsis)
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator)

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-42
Identity = 80/187 (42.78%), Postives = 125/187 (66.84%), Query Frame = 1


		  
Query: 52  RIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQRKQV 111
           R Y  +S+YKGKAAL+  P    F  +DSG  K+ + G+++L F+P  G R+YDW +KQV
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 112 FALSVTEVGSLLTLGPNSSVDFFHDPAIQTSNAGQVRKGLSIKANSEGTGYFFSINVANN 171
           F+LSVTE+G+L++LGP  S +FFHDP    S+ G+VRK L ++   +G+G+FF+++V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 172 ITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRSL--- 231
           +  V+E   +P+T AEFAV+ ++F+ VLP+++GW  ++     +K E + +V   S    
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANS---IKPEETSRVNNASPNYG 259

Query: 232 -DSEWDR 235
            D EW+R
Sbjct: 260 GDYEWNR 263

[Close]

BLAST of Spo17851.1 vs. TAIR (Arabidopsis)
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator)

HSP 1 Score: 167.2 bits (422), Expect = 1.200e-41
Identity = 81/191 (42.41%), Postives = 128/191 (67.02%), Query Frame = 1


		  
Query: 49  NADRIYAAYSVYKGKAALSAHPVPATFSKVDSGGVKVKRQGYIMLSFSPCVGERKYDWQR 108
           ++ R Y  +S+YKGKAAL+  P    F  ++SG  K+ ++G+++L F+P  G R+YDW R
Sbjct: 81  SSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSR 140

Query: 109 KQVFALSVTEVGSLLTLGPNSSVDFFHDP-AIQTSNAGQVRKGLSIKANSEGTGYFFSIN 168
           KQVF+LSVTE+G+L++LGP  S +FFHDP   + S+ G+VRK L ++   +G+G FF+++
Sbjct: 141 KQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLS 200

Query: 169 VANNITKVNERFTVPVTSAEFAVMRTSFSSVLPHIMGWDRYSYQPPVLKEENSVKVGMRS 228
           V N +  V+E   +P+T AEFAV+ ++F+ VLPH++GW  ++     +K E+S ++   S
Sbjct: 201 VQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANS---IKPEDSNRLNNAS 260

Query: 229 L----DSEWDR 235
                D EW R
Sbjct: 261 PKYGGDYEWSR 268

The following BLAST results are available for this feature:

BLAST of Spo17851.1 vs. NCBI nr
BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
BLAST of Spo17851.1 vs. TAIR (Arabidopsis)

BLAST of Spo17851.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902149945\|gb\|KNA05359.1\|	8.7e-130	100.	hypothetical protein SOVF_1911...	[more]
gi\|731312956\|ref\|XP_010677192.1\|	7.5e-89	73.0	PREDICTED: single-stranded DNA...	[more]
gi\|568849092\|ref\|XP_006478304.1\|	1.9e-63	55.7	PREDICTED: single-stranded DNA...	[more]
gi\|641832358\|gb\|KDO51395.1\|	5.4e-63	55.3	hypothetical protein CISIN_1g0...	[more]
gi\|697178734\|ref\|XP_009598357.1\|	7.0e-63	52.7	PREDICTED: single-stranded DNA...	[more]

BLAST of Spo17851.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QDK6_SPIOL	6.1e-130	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D1A6_BETVU	5.2e-89	73.0	Uncharacterized protein OS=Bet...	[more]
A0A067EBX1_CITSI	3.8e-63	55.3	Uncharacterized protein OS=Cit...	[more]
A0A0V0HNQ1_SOLCH	1.2e-61	56.7	Putative single-stranded DNA-b...	[more]
K4D8E0_SOLLC	1.2e-61	55.5	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo17851.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
WHY2_SOLTU	8.3e-64	57.2	Single-stranded DNA-bindig pro...	[more]
WHY2_ARATH	1.3e-53	45.1	Single-stranded DNA-binding pr...	[more]
WHY1_MAIZE	1.8e-42	48.1	Single-stranded DNA-binding pr...	[more]
WHY1_SOLTU	4.0e-42	41.8	Single-stranded DNA-binding pr...	[more]
WHY1_ARATH	2.6e-41	42.7	Single-stranded DNA-binding pr...	[more]

BLAST of Spo17851.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G71260.1	7.5e-55	45.1	WHIRLY 2	[more]
AT1G14410.1	1.5e-42	42.7	ssDNA-binding transcriptional ...	[more]
AT2G02740.1	1.2e-41	42.4	ssDNA-binding transcriptional ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10		coord: 46..211 score: 4.7
IPR009044	ssDNA-binding transcriptional regulator	unknown	SSF54447	ssDNA-binding transcriptional regulator domain	coord: 51..213 score: 3.77
IPR013742	Plant transcription factor	PFAM	PF08536	Whirly	coord: 59..193 score: 2.8
None	No IPR available	PANTHER	PTHR31745	FAMILY NOT NAMED	coord: 26..234 score: 3.8
None	No IPR available	PANTHER	PTHR31745:SF1	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 26..234 score: 3.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0009987	cellular process
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0010467	gene expression
biological_process	GO:0008152	metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016787	hydrolase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01105	0.68	Barchart \| Table