Spo17853 (gene) | SpinachBase

Overview


Name	Spo17853
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cytoplasmic membrane protein
Location	chr2 : 54858983 .. 54864842 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTAAAAATTCAAAGGGTTTGACATTTTGACAAGGATGAGATACACAATTGTGGGAAAATAAATATCTAATCGGAGTACTATTAACAATAAAATAAACATGAGGTGAGAACAAAAATTGAAACAAAGTTGCTTGAATTGTTGCCATCTCTCTAAATTTCAACTTTCTGGGCTCTAACTTCTACTCCATCTCCGATCTCAAATCTTTACTGAATAACAATATCTCCTTTCTCTAAATCCGACCCAACAATGTCCGGTTTGTGTTCTTGGCTCCACAGCAGGATCGTCGAACCCCTTCTCCAAATCTTACGCAGGTATTTATATATGTGTGTTTTTCTACTCATTTTCCTCAAAATTTGGACCTTTTACTTAGATAATCTTCAATTATTGTCACTTTCTGAAGTGGGGTTTCATTATCTATGTCAAATTATAGTTTTAAATGCTTATCTCAGCTCAAATTTCCGAGCTCTAATTTGGGTACAATATAATTTATTTATTTTTAGTTTTTTTTTTAATTTTTTTCAATTGAAATGGGTTACAGGGGTGCAGAGCCTAAGCTATTGGCGTTTTCATCAGCTCTTGGTCTTACATTGGGTGTATTCCCAATATGTGGTATGTTGCTTTCTTAATTTCTTTGTCTCCTTTTCATTTGATGTTTGTTTTTTACTCCATGTTACTCGGACTTATATACTCATGTTGGACATCAATATGAGTCCAAATGTCCCACTCGGCTATTTTGTAATAAGGTGAAATAAAGAGTTAGAGTAACATTAACTTCAGTTAAAGTTTGCATTTTTGTTGCTGACTTGATAATTTGAGCTGTTGGGTATGAATCGTTTCTGAGTATAGCTTGTAGTTAAGTTGATTATGATCTTATGGGTTTGTTATGAACTATCTACAATTGCAAATGGGCGCGTCTTAGCTTGTATTTTCGTTTTACTCTAAGTCTAGATGGTCTAAATTTGATGGATGATGTAATGCCTATAGGCATGGGATTGTATGTGGGACTTGCAACTTTTCACTGTGTTGCACATCATGTTTAATGGTCTTTGTGTTTGTTTCTTGCTTTTGCTCAAAGATGCCTTTTTTGTGCTTCTTTGCAACTCGGGTGTTTGTGCTTCCTTATCTTCTTCCTTGTGCCAAGAATAGGTTGGCATTGAAATTGTTTCTTGCTGTTTTGTAAAACGAAGAGAAAGTATAACTAGTGGTCTAGTGGAAGCTAAAATGAATTGTGCAAGTTCTTGTACTTGAAAGATTCGCCTCAGGCTGCATGTGACTGGTTTAAACCTTAGTTTTATTGTGCAAGTTCTTGTACTTGAAAGATTCGCCTCAGGCTGCATGTGACTGGTTTAAACCTTAGTTTTATGATTACCTTCTTAATTTGAAACTAGGTGACCTAGTTCCCCAAACCTTTGGCATACCTCTTGGAACTCTATATCTGGTGGAAACTAAAATGAATTGTGCAAGTTAGACTTTGAGCTGCTTTGGGGAATCATTTGGATCTCTTCAACTGGTGAACCAATCCATCATTGGCTCATTGCCTTAGACATAGAAGTTCTGTAAATAACATGAGAAAGTTGTTTTACGTTTTGACCTGTGGAAGTATTTTCTTTCCAAATTCTTGCAATGCCTATTATATTGTTTATAACTTTATATACAAGGAGTAAGGAGTTTCCTTTTAACTACTTTGACCTTTCTACGGATTTCGTTAATCTAAGGTGAGGGAAATAAATCAAGTAATGTTTCATTTATTTTGATTGGTGATGTCAAAATACTTTTAATTTTCTTTCTAGTTGTTCCCATGAAGAATGCATTAGTATTCAGGAAACTAGTTCACAGGTAGATGTTGCTAACCTGTACTATGTTTGTGACTTGATAGGGCTGATACATATGCAGGACTTGTATGCATGTGTCATTGTGCTGAAGCTATAACCGTGATCTTAAAACTAAACGGCGGCTGTGAGAAAATTCCTACAAGTTGGTATTTTGTAATGGAAATAATTTACCAACTTGTAGAGTTGTAGGTATTTTCTAGTTTCTACTATCCCCCATATCGCAGAAAAATATTTAAAATTGAGCAACAATAGAAGTATTCCCAAATCCCAATCACCTGAAATGACAAATTTATAACTTATGCCTTTGGAGAGTATGTGATTTTTAGGTCACCATGAGTCCTTTAATTGTGGTTTTATGGGAACACCTATAATTCAAGGGTGGTCATGTAATGCTGAAATAATTATTGTCATGTATGGAGTACGGTGCTCTCTGGCAGACGATGTTAACTGTTATACTTGGTTACATGGTGGCTAGTTTCTTAGCACAAGTGAGAAGACTGATTCAAAGTGATGTTTATTTGTGAATAGTCATGCAAATTTGCATTAATCTTTTACAGGGGTTACTATATTTCTGTGTGGATTGGCCATTCCGTTGTTGGGGTCACGTTGCCATCCTGCAAGTGTGCTGCTGGCAAATTTTGTGGCTACTCCCATTGAGTTGAGGTAACCTTGCTTTTCAATGTAATAACTTCCATTGTCCGAGGCTAAAAATTACTAACATGTGCTTCTGACTGTGGCCTGACTTACTGTTTTGTCTTTATGGTTTCATTCGTACACTTTATCTTTGTTATATTGAGTTATAGTTTGTGTGCACTGTAGTTTGGTGATACCCTTCTTGCGTCTTGGTGAAGCTATTTGTGGCGGTCCTCAATTTCCGTTGACCTCTGATGCTTTGAGGAAGGTCCTGACTGGACATGCTTCAACTGAAGTTCTTCTAAGCATACTTCATGCGGTATGGATTCAACCTACTATACTCCCTCCTCCTCCCCCCCCCCNCCCCCCCCCCCATGTTAACTCCCTCCACCCCTTTGTGTATATTTGTAAATTACACCTTGTAGGGATCGCACACCATCCAACACCTGAATACATTACATAGTGGCTCTAATAAAACTTCCACCATGGTTAAGGTGGAAGAAAGTTTTTTTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCAACAACAAAGATAGTGTTTAATCTTACGCTCACACATCACAATCACAAAAGGCTGTTTCTTGAAGATTGCTATTAGAAAAAGGTAAGTTGATGACATGCTATTTCACAGTAATTTAAGAGACATGTTTTAGTCTATTATAAGCTGAAGTGCAAAAACTAAGAAAAACAATTGCGGTTTGCATTTACATTTTGACTGTGAATGAGAAAAATGTATTGGGTAGATCCTTAGGTAGATTCATCATTCATTGAATTGATCTTGGTATAGGATTGGAAAGAGGTTGTATTACATGGTATAGGATTCTCCGCATTGTTTCGAAGATAAACTGTATGATTGTTTCATATTTCTAAACTCCCTGTTGCTTCAGAAAGGGAAATGTAAGTTACTAAATAATGTCCATAAAGATCCTGTCAGCAGATACGGTCGCTTGGTTGATAGTAAGAAATTATACGGAGTATTTTTTACGAAATTCGAATTCTGGGGGAGTTTCCATTTCCTAGGAAGTACAGAAATCTGATTGTTTGACTGCTCAACAGTGGCGGAGCCACGGGCCTCTTTGAGGGGTCCTTCACCCCACTTGATTTTTTTTATTTTATTTTTATAGTTAAATTTTCAATTTTTTTTTTAAAATACATAATTTTAGTGAAAGTTTCATCAATTTTTAAATAGTGACCCCGCTATCTCGAATTTCTGGATCCGGTACTGCTGCTCAATAATGTTGGATCTTGACAGTAGAAGTTCTTAAGAAGAATTTCTAGCTTTGTGCTAATTGAACAACTACACAATCTTTTACTTTTCGAGAAGTATATCTTCCCGTTCCTCCATGTCAACCAAACAACAACTAAGAAGGTTTGATGACTGTGACATGGACTATACCTAAGTTCCTTGGTACACCCTAGTGGCGATCAAGACTAAATTATACAATGTAGTTTAAGAAGCAGTCCAAGTTATACAGACAGCTGGGTCTGAGCTCGATAGTTTCATAGGAATCCTTTTAAGCAAGTTCAGCACTAATACTAATATTTCACGAGGATAATACTCAACCTGCTCAAATGTTTGAAATCATTTCTTATTCAGGTGCATAGTATGTCACTGTAGATATTTTGATCTTTTGTCTTTAAAGTTCACTACAGATTTTTAGTCATCAGAGATTGTTTCTACAGAGTACACTTCATTTAGACTGCTCTTGTCCTTGATCATATTGAGTTACTCACATATCTAGAGTTGACAATTAGGCTGGGTTGTGTTTGAGTTGGGTCAATTTTGGGTCTATTGGAAATAAAGTTTGTTGTAGAAAGCCCATCAATTTCAGCTATATTTGATTCCGAACGGTCCTGAGTCAATTTCACTGTTCATGTCAGTTAGTGTCTGATTTAGGTCTGCTTTGGGTATGGGTCAACTATGATGTCAGTTTTTTCAGGAGCATCCGTGTAGATATATCCATTAGATGTCTTAAATGAAGCAGTTGAAATTATGACACATCTAATTGTACCAATTGCTTTTGAAGTTTGAGAGGCTTAGGATGTTGATCTGTTATCACTTAAACGATACTCTCTCTTTTTTCACTGGAGTGATTGGGTTACTTTTTACTCCGTGTCTGACAAGTTTCGAATGAAACAATCCTTAAATGTCCATTGCCACTCTTGTGTCATTAATGTGTTTCTCCACTGTAAACTATCCATTGCCACTCTTTGCTCTCATGTAATGAACTAGCCTATTAGGGAGAGTAGTTTAGTATTGCACAATTAGTTGGTTAAGGGTAGTTTGAGACTTTGAGGAGTAAAATAATCTACTACAAATAAGGGAGTGTAGGTAAAGAGAAAACATCCAGAATTACTGATTTGTTATGTGTTGTTTAGCATTTTGGGAGTGAAACAAGCCACTCGAAAGCTTGTATCTATCAATCAGTTGTTCCATTTTCCATTATCACCAATCAAATCTCTTCGATCCTTCTTTTTACTTTTTGGGGTTTCATAGTGTTCTCTGTCATTTCAGCTTAGGGTAGTTCATCTTCATCCTCCCATCACATTAATTAAATATCATGAACTTCCCTGAAAATGGCCTATTGTTCTATCAATAGCCTTTTCTTGTTCTTAAAGTAAACTGTGATATGCTAATATGTTGCTTTTGGACTCTTTATGTACAGATGGTGGGGTGGTTGGTTGCAGCACCATTTATCCTGGCTCTGCTTTACGTTCTATTTTTGCCATGTTACAAAATTCTTGTGCAGAAATTCAGCTCTGCCTCCTTAAACGAAAAGCTAAAAAGTGATGAAGAACTTAGGCTCAAGGTGAGGGCTGCCTGAACTATTATACTGTATGTTTAGAAATACATGTAGTTTTCTCCTTTAATTAGGCGTTTAGGCATCCAGGCCGTGAATGTTTTTTCTTCTTCTCCAGGCCACCTTGATTGAATAGACAATATCCTCATGGGTTTGTTTAGTTGAATCGATTGATCTGATCAGAAGATGTTCTTTGCACAAAGAACTACTAAATCTTTATTCAACTGTATTTATGTACATCTGAATCCGAATCTGCTGATCAGTTTATTCTGCTATCTGTTTGGAGGGTGACGGTTCTTGTTGAATTACAGTCGAAAGAACTATGAAAAGTGACCTTGATTCCCACTCATAAAACTCATTTCTCATATGTAAATAACCAAAATGTGAAGAGAGAACTCATCCTTGTAAAGTTTGTATATTGTTGTGCTAAGATCACAGTTTGTTTATTACCATTGTCGCGGATCATTGATATCTTCTTCCACTTCCCTGAACGAATGTGCAATTCTATAGCCGGGTTATTTTATCTGGTGACTGCATCACTGCAGGTCTGCAGCATAATGTTACAAACTTGG

mRNA sequence

AGTTTAAAAATTCAAAGGGTTTGACATTTTGACAAGGATGAGATACACAATTGTGGGAAAATAAATATCTAATCGGAGTACTATTAACAATAAAATAAACATGAGGTGAGAACAAAAATTGAAACAAAGTTGCTTGAATTGTTGCCATCTCTCTAAATTTCAACTTTCTGGGCTCTAACTTCTACTCCATCTCCGATCTCAAATCTTTACTGAATAACAATATCTCCTTTCTCTAAATCCGACCCAACAATGTCCGGTTTGTGTTCTTGGCTCCACAGCAGGATCGTCGAACCCCTTCTCCAAATCTTACGCAGGGGTGCAGAGCCTAAGCTATTGGCGTTTTCATCAGCTCTTGGTCTTACATTGGGTGTATTCCCAATATGTGGGGTTACTATATTTCTGTGTGGATTGGCCATTCCGTTGTTGGGGTCACGTTGCCATCCTGCAAGTGTGCTGCTGGCAAATTTTGTGGCTACTCCCATTGAGTTGAGTTTGGTGATACCCTTCTTGCGTCTTGGTGAAGCTATTTGTGGCGGTCCTCAATTTCCGTTGACCTCTGATGCTTTGAGGAAGGTCCTGACTGGACATGCTTCAACTGAAGTTCTTCTAAGCATACTTCATGCGATGGTGGGGTGGTTGGTTGCAGCACCATTTATCCTGGCTCTGCTTTACGTTCTATTTTTGCCATGTTACAAAATTCTTGTGCAGAAATTCAGCTCTGCCTCCTTAAACGAAAAGCTAAAAAGTGATGAAGAACTTAGGCTCAAGGTGAGGGCTGCCTGAACTATTATACTGTATGTTTAGAAATACATGTAGTTTTCTCCTTTAATTAGGCGTTTAGGCATCCAGGCCGTGAATGTTTTTTCTTCTTCTCCAGGCCACCTTGATTGAATAGACAATATCCTCATGGGTTTGTTTAGTTGAATCGATTGATCTGATCAGAAGATGTTCTTTGCACAAAGAACTACTAAATCTTTATTCAACTGTATTTATGTACATCTGAATCCGAATCTGCTGATCAGTTTATTCTGCTATCTGTTTGGAGGGTGACGGTTCTTGTTGAATTACAGTCGAAAGAACTATGAAAAGTGACCTTGATTCCCACTCATAAAACTCATTTCTCATATGTAAATAACCAAAATGTGAAGAGAGAACTCATCCTTGTAAAGTTTGTATATTGTTGTGCTAAGATCACAGTTTGTTTATTACCATTGTCGCGGATCATTGATATCTTCTTCCACTTCCCTGAACGAATGTGCAATTCTATAGCCGGGTTATTTTATCTGGTGACTGCATCACTGCAGGTCTGCAGCATAATGTTACAAACTTGG

Coding sequence (CDS)

ATGTCCGGTTTGTGTTCTTGGCTCCACAGCAGGATCGTCGAACCCCTTCTCCAAATCTTACGCAGGGGTGCAGAGCCTAAGCTATTGGCGTTTTCATCAGCTCTTGGTCTTACATTGGGTGTATTCCCAATATGTGGGGTTACTATATTTCTGTGTGGATTGGCCATTCCGTTGTTGGGGTCACGTTGCCATCCTGCAAGTGTGCTGCTGGCAAATTTTGTGGCTACTCCCATTGAGTTGAGTTTGGTGATACCCTTCTTGCGTCTTGGTGAAGCTATTTGTGGCGGTCCTCAATTTCCGTTGACCTCTGATGCTTTGAGGAAGGTCCTGACTGGACATGCTTCAACTGAAGTTCTTCTAAGCATACTTCATGCGATGGTGGGGTGGTTGGTTGCAGCACCATTTATCCTGGCTCTGCTTTACGTTCTATTTTTGCCATGTTACAAAATTCTTGTGCAGAAATTCAGCTCTGCCTCCTTAAACGAAAAGCTAAAAAGTGATGAAGAACTTAGGCTCAAGGTGAGGGCTGCCTGA

Protein sequence

MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSILHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLKVRAA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17853.1	Spo17853.1	mRNA

Homology

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BLAST of Spo17853.1 vs. NCBI nr
Match: gi|902212596|gb|KNA17031.1| (hypothetical protein SOVF_083810 [Spinacia oleracea])

HSP 1 Score: 331.6 bits (849), Expect = 8.200e-88
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 1


		  
Query: 1   MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG 60
           MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG
Sbjct: 1   MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG 60

Query: 61  SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL 120
           SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL
Sbjct: 61  SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL 120

Query: 121 SILHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLK 174
           SILHAMVGWLVAAPFILALLYV+FLPCYKILVQKFSSASLNEKLKSDEELRLK
Sbjct: 121 SILHAMVGWLVAAPFILALLYVIFLPCYKILVQKFSSASLNEKLKSDEELRLK 173

[Close]

BLAST of Spo17853.1 vs. NCBI nr
Match: gi|731312950|ref|XP_010677181.1| (PREDICTED: uncharacterized protein LOC104892857 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 275.4 bits (703), Expect = 6.900e-71
Identity = 139/172 (80.81%), Postives = 155/172 (90.12%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GLCSW++++IVEPLLQILRRGAEPKLLAFSSALG T G+FPICGVT+ LCG+AIPLLGSR
Sbjct: 7   GLCSWVNNKIVEPLLQILRRGAEPKLLAFSSALGFTFGIFPICGVTVLLCGMAIPLLGSR 66

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CHP SVLLANFVATP+ELSLV+PFLRLGE ICGGP+FPLT DAL+KVLTG AS EVLLSI
Sbjct: 67  CHPPSVLLANFVATPVELSLVVPFLRLGETICGGPRFPLTPDALKKVLTGQASIEVLLSI 126

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLKV 175
            HA+VGWL AAPFILALLYV+FLPCYKILV+KFSSA L     S EELR+K+
Sbjct: 127 GHALVGWLFAAPFILALLYVIFLPCYKILVRKFSSAPLIPTKPSQEELRVKL 178

[Close]

BLAST of Spo17853.1 vs. NCBI nr
Match: gi|731312954|ref|XP_010677187.1| (PREDICTED: uncharacterized protein LOC104892857 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 275.0 bits (702), Expect = 9.100e-71
Identity = 139/171 (81.29%), Postives = 154/171 (90.06%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GLCSW++++IVEPLLQILRRGAEPKLLAFSSALG T G+FPICGVT+ LCG+AIPLLGSR
Sbjct: 7   GLCSWVNNKIVEPLLQILRRGAEPKLLAFSSALGFTFGIFPICGVTVLLCGMAIPLLGSR 66

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CHP SVLLANFVATP+ELSLV+PFLRLGE ICGGP+FPLT DAL+KVLTG AS EVLLSI
Sbjct: 67  CHPPSVLLANFVATPVELSLVVPFLRLGETICGGPRFPLTPDALKKVLTGQASIEVLLSI 126

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLK 174
            HA+VGWL AAPFILALLYV+FLPCYKILV+KFSSA L     S EELR+K
Sbjct: 127 GHALVGWLFAAPFILALLYVIFLPCYKILVRKFSSAPLIPTKPSQEELRVK 177

[Close]

BLAST of Spo17853.1 vs. NCBI nr
Match: gi|731312952|ref|XP_010677183.1| (PREDICTED: uncharacterized protein LOC104892857 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 275.0 bits (702), Expect = 9.100e-71
Identity = 139/171 (81.29%), Postives = 154/171 (90.06%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GLCSW++++IVEPLLQILRRGAEPKLLAFSSALG T G+FPICGVT+ LCG+AIPLLGSR
Sbjct: 7   GLCSWVNNKIVEPLLQILRRGAEPKLLAFSSALGFTFGIFPICGVTVLLCGMAIPLLGSR 66

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CHP SVLLANFVATP+ELSLV+PFLRLGE ICGGP+FPLT DAL+KVLTG AS EVLLSI
Sbjct: 67  CHPPSVLLANFVATPVELSLVVPFLRLGETICGGPRFPLTPDALKKVLTGQASIEVLLSI 126

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLK 174
            HA+VGWL AAPFILALLYV+FLPCYKILV+KFSSA L     S EELR+K
Sbjct: 127 GHALVGWLFAAPFILALLYVIFLPCYKILVRKFSSAPLIPTKPSQEELRVK 177

[Close]

BLAST of Spo17853.1 vs. NCBI nr
Match: gi|1009114719|ref|XP_015873838.1| (PREDICTED: uncharacterized protein LOC107410866 [Ziziphus jujuba])

HSP 1 Score: 245.7 bits (626), Expect = 5.900e-62
Identity = 125/174 (71.84%), Postives = 148/174 (85.06%), Query Frame = 1


		  
Query: 2   SGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGS 61
           +GL  W H++IV+PL QIL RGAEPKLLAFS+ALG+T GVFPICGVT+FLCG+AI LL S
Sbjct: 4   TGLSIWFHNKIVDPLFQILSRGAEPKLLAFSAALGITFGVFPICGVTVFLCGVAIALLRS 63

Query: 62  RCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLS 121
            CH  SV+LANF+ATPIELSLVIPFLR GEAI GG  FPLTSDAL+KVLTGHAS EVLLS
Sbjct: 64  LCHAPSVMLANFIATPIELSLVIPFLRFGEAITGGEHFPLTSDALKKVLTGHASKEVLLS 123

Query: 122 ILHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEK--LKSDEELRLK 174
           I HA++GW++AAPF+LA LY+LFLPC+KILV+KF+S  L+ +  L S  E+RLK
Sbjct: 124 IAHALLGWVIAAPFLLATLYILFLPCFKILVRKFTSVPLSPRKPLHSHSEIRLK 177

[Close]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC14_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083810 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.700e-88
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 1


		  
Query: 1   MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG 60
           MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG
Sbjct: 1   MSGLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLG 60

Query: 61  SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL 120
           SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL
Sbjct: 61  SRCHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLL 120

Query: 121 SILHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLK 174
           SILHAMVGWLVAAPFILALLYV+FLPCYKILVQKFSSASLNEKLKSDEELRLK
Sbjct: 121 SILHAMVGWLVAAPFILALLYVIFLPCYKILVQKFSSASLNEKLKSDEELRLK 173

[Close]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6T7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009810 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.800e-71
Identity = 139/172 (80.81%), Postives = 155/172 (90.12%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GLCSW++++IVEPLLQILRRGAEPKLLAFSSALG T G+FPICGVT+ LCG+AIPLLGSR
Sbjct: 7   GLCSWVNNKIVEPLLQILRRGAEPKLLAFSSALGFTFGIFPICGVTVLLCGMAIPLLGSR 66

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CHP SVLLANFVATP+ELSLV+PFLRLGE ICGGP+FPLT DAL+KVLTG AS EVLLSI
Sbjct: 67  CHPPSVLLANFVATPVELSLVVPFLRLGETICGGPRFPLTPDALKKVLTGQASIEVLLSI 126

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLKV 175
            HA+VGWL AAPFILALLYV+FLPCYKILV+KFSSA L     S EELR+K+
Sbjct: 127 GHALVGWLFAAPFILALLYVIFLPCYKILVRKFSSAPLIPTKPSQEELRVKL 178

[Close]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6G9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009810 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.300e-71
Identity = 139/171 (81.29%), Postives = 154/171 (90.06%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GLCSW++++IVEPLLQILRRGAEPKLLAFSSALG T G+FPICGVT+ LCG+AIPLLGSR
Sbjct: 7   GLCSWVNNKIVEPLLQILRRGAEPKLLAFSSALGFTFGIFPICGVTVLLCGMAIPLLGSR 66

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CHP SVLLANFVATP+ELSLV+PFLRLGE ICGGP+FPLT DAL+KVLTG AS EVLLSI
Sbjct: 67  CHPPSVLLANFVATPVELSLVVPFLRLGETICGGPRFPLTPDALKKVLTGQASIEVLLSI 126

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRLK 174
            HA+VGWL AAPFILALLYV+FLPCYKILV+KFSSA L     S EELR+K
Sbjct: 127 GHALVGWLFAAPFILALLYVIFLPCYKILVRKFSSAPLIPTKPSQEELRVK 177

[Close]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Match: W9S9P1_9ROSA (E3 ubiquitin-protein ligase ATL59 OS=Morus notabilis GN=L484_012645 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.400e-62
Identity = 125/177 (70.62%), Postives = 151/177 (85.31%), Query Frame = 1


		  
Query: 3   GLCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSR 62
           GL  WLH +IV+PLLQILRRGAEPKLLA S+A+G+TLGVFPICGVT+FLCG+AI +LGSR
Sbjct: 5   GLSVWLHKKIVDPLLQILRRGAEPKLLASSAAVGITLGVFPICGVTVFLCGMAIAVLGSR 64

Query: 63  CHPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSI 122
           CH  +V+LANF+ATPIELSLVIPFLR GE I GG  FPLTSDAL+KVLTG AS +VLLSI
Sbjct: 65  CHAPTVMLANFIATPIELSLVIPFLRFGEVISGGSHFPLTSDALKKVLTGQASRDVLLSI 124

Query: 123 LHAMVGWLVAAPFILALLYVLFLPCYKILVQKFSS--ASLNEKLKSDEELRLKVRAA 178
            HA++GWLVA PFILA LY+LFLPC+KILV+KFS+  +S  + L S  E++LK+ ++
Sbjct: 125 AHALLGWLVAVPFILAALYILFLPCFKILVRKFSALPSSPKKPLHSHSEVKLKIESS 181

[Close]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Match: A0A061FJX0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036068 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.100e-62
Identity = 125/171 (73.10%), Postives = 148/171 (86.55%), Query Frame = 1


		  
Query: 7   WLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSRCHPA 66
           WLH++IV+PLLQILR+GAEPK LAFS+ALG+TLG+FPICGVT+ LCG+AI LLGS  H  
Sbjct: 6   WLHNKIVDPLLQILRKGAEPKQLAFSAALGITLGIFPICGVTVLLCGMAIALLGSLSHSP 65

Query: 67  SVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSILHAM 126
           +V+LANF+ATPIELSLV+PFLR GEAI GGP FPLTSDAL+KVLTGHAS EVLLSI HA+
Sbjct: 66  TVMLANFIATPIELSLVVPFLRFGEAIAGGPHFPLTSDALKKVLTGHASHEVLLSIAHAL 125

Query: 127 VGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEK--LKSDEELRLKVR 176
           +GWLVAAP ILA+LY+LFLP +K+LV KFSS  L+ +  L S  E+RLKVR
Sbjct: 126 LGWLVAAPIILAILYILFLPIFKVLVPKFSSVPLSPRKPLHSHSEVRLKVR 176

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BLAST of Spo17853.1 vs. TAIR (Arabidopsis)
Match: AT1G33490.1 (unknown protein)

HSP 1 Score: 222.6 bits (566), Expect = 1.900e-58
Identity = 109/164 (66.46%), Postives = 134/164 (81.71%), Query Frame = 1


		  
Query: 7   WLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSRCHPA 66
           W   +I EPL+QILRRGAEPK LAFS+ALG+T+GVFPICGVT+ LCG+AI  LGS CH  
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 67  SVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSILHAM 126
           +V+LANF+ATPIELSLV+PFLRLGE I GGP FPLTSDAL+KV TG AS +V LSI +A+
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 127 VGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEEL 171
           +GWL+AAPF++  LY++FLPC+KILV+KFSS     K  + E +
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAKTPTKERI 174

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BLAST of Spo17853.1 vs. TAIR (Arabidopsis)
Match: AT4G10140.1 (unknown protein)

HSP 1 Score: 211.5 bits (537), Expect = 4.300e-55
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1


		  
Query: 4   LCSWLHSRIVEPLLQILRRGAEPKLLAFSSALGLTLGVFPICGVTIFLCGLAIPLLGSRC 63
           L +W + +I +PLLQILRRG EPK LAFS+ALG+TLG+FPICGV + LCG+A  LLGS C
Sbjct: 8   LKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSC 67

Query: 64  HPASVLLANFVATPIELSLVIPFLRLGEAICGGPQFPLTSDALRKVLTGHASTEVLLSIL 123
           H  +V+LAN +ATP+EL+LV+PFLRLGE + GGP FPLTSDAL+KV TG AS EV LSI 
Sbjct: 68  HAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIG 127

Query: 124 HAMVGWLVAAPFILALLYVLFLPCYKILVQKFSSASLNEKLKSDEELRL 173
           +A++GWLVA PF    LYV+ LPC+ ILV+KF   +  +KL +  E  L
Sbjct: 128 NALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETEL 176

The following BLAST results are available for this feature:

BLAST of Spo17853.1 vs. NCBI nr
BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
BLAST of Spo17853.1 vs. ExPASy Swiss-Prot
BLAST of Spo17853.1 vs. TAIR (Arabidopsis)

BLAST of Spo17853.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902212596\|gb\|KNA17031.1\|	8.2e-88	99.4	hypothetical protein SOVF_0838...	[more]
gi\|731312950\|ref\|XP_010677181.1\|	6.9e-71	80.8	PREDICTED: uncharacterized pro...	[more]
gi\|731312954\|ref\|XP_010677187.1\|	9.1e-71	81.2	PREDICTED: uncharacterized pro...	[more]
gi\|731312952\|ref\|XP_010677183.1\|	9.1e-71	81.2	PREDICTED: uncharacterized pro...	[more]
gi\|1009114719\|ref\|XP_015873838.1\|	5.9e-62	71.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17853.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RC14_SPIOL	5.7e-88	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8D6T7_BETVU	4.8e-71	80.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8D6G9_BETVU	6.3e-71	81.2	Uncharacterized protein OS=Bet...	[more]
W9S9P1_9ROSA	5.4e-62	70.6	E3 ubiquitin-protein ligase AT...	[more]
A0A061FJX0_THECC	9.1e-62	73.1	Uncharacterized protein OS=The...	[more]

BLAST of Spo17853.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17853.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G33490.1	1.9e-58	66.4	unknown protein	[more]
AT4G10140.1	4.3e-55	61.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018639	Domain of unknown function DUF2062	PFAM	PF09835	DUF2062	coord: 16..154 score: 1.8
None	No IPR available	PANTHER	PTHR35102	FAMILY NOT NAMED	coord: 1..177 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0097503	sialylation
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019530	taurine metabolic process
biological_process	GO:0045859	regulation of protein kinase activity
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0009056	catabolic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0051179	localization
biological_process	GO:0010035	response to inorganic substance
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006887	exocytosis
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0046909	obsolete intermembrane transport
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0010118	stomatal movement
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005956	protein kinase CK2 complex
cellular_component	GO:0005768	endosome
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0008373	sialyltransferase activity
molecular_function	GO:0000149	SNARE binding
molecular_function	GO:0019887	protein kinase regulator activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0047800	cysteamine dioxygenase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0019003	GDP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09762	0.74	Barchart \| Table
Spo25874	0.70	Barchart \| Table
Spo22506	0.70	Barchart \| Table
Spo21658	0.70	Barchart \| Table
Spo00840	0.69	Barchart \| Table
Spo12219	0.69	Barchart \| Table
Spo02580	0.68	Barchart \| Table
Spo22364	0.68	Barchart \| Table
Spo04104	0.68	Barchart \| Table
Spo02440	0.67	Barchart \| Table
Spo09150	0.67	Barchart \| Table
Spo03505	0.67	Barchart \| Table
Spo22463	0.67	Barchart \| Table
Spo15824	0.66	Barchart \| Table
Spo04663	0.66	Barchart \| Table
Spo06829	0.66	Barchart \| Table
Spo04348	0.66	Barchart \| Table
Spo20958	0.66	Barchart \| Table
Spo02460	0.66	Barchart \| Table
Spo15430	0.65	Barchart \| Table
Spo10107	0.65	Barchart \| Table
Spo05529	0.65	Barchart \| Table
Spo24866	0.65	Barchart \| Table
Spo16563	0.65	Barchart \| Table