Spo17854 (gene) | SpinachBase

Overview


Name	Spo17854
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ring 2
Location	chr2 : 54849482 .. 54857451 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCGTCATGTCAGAAAATTTGTCCCATTATTTGACAGATGGAATTGCATGCTGCACTCTTCCGGATAAACTATATTCGCCTTCATTTCTTATAACATCACTATCAATTTCCCAATCACAAATACTACGAATTTCACTATTTTTTAGTATAAATCTGCTCGGATCTTCCCTAAATTCGGGGAATCATTAGATATTTTCCTTCAATTTATCAGTAATTTCATCTATAAAACCCTAATTTCCGACATTTTCCCCCCAGAATTCTGCTTTTTTGATCTGTAAATGTCCCCTTCAAATGCATCCTACAATGGTAGGAGAAGCAGCGGAAATCGCCGCATTATAGAATCGAGTCCATTTGAAACGGAATCGAGTATAATTAGTAGCAGAAATGACGGTGGCGGTGGCGGTGGTAGTGATAGTCATACAGAATCATTGAAATTGTATGAAGCAATTATATTTTCTGGACCAATTGTGTTCACATTGATCATAATTTTCTTGTTTTACTTCTTCTATCTCCGCCGTCATAGTGTGGATTGGTCTTCTCTTCGTATGCGTGCTTCGAATTCTGCTGCCGTAGCCGCCGCCGCTACCGATGGCGTTGAGGTATATAGCTTGTTGATTAGCTAATTGATGGGTTAAGCTGCATTGTTTAATGTTCTTTGATAATGAATTGTGATTTGATGATGAATTGTGATTTGATTTGATCTGATTTATAGGTGGTTGAGCTGGGGTTGAAGAAAGAATTTAGGGAGATGCTGCCAATAATCGTGTTTAAGGAGAGCTTTTCTGTTAGAGACACACAGTGAGTTCATCTCTCTTTTTTGCTTTTTTGTTCTTTTTAGTATGCTTTAATTGAGATAGTGGAGTTTGGTTTATGAAAAAGTGGTGGTAGTAATTATGCGGTTTTAGAAATTATGTAAAATGTGGGGAAATTGATTTTGGATAAGAAAACTGCTCATTGAGACTCAAACTTGCTTGTTGGATAGTGGATAAACAAGATTTTTTAGTGAGAATGTAATGAGATTCGCTGACGGTTTCGTTAAATGGGTGGTGAGTAGTTATTTTGATGAGGTTATGCTGGATTCTTTAGATTCTGGTGGTATATCGGACTCTCCGACTGAGGGTTTCTAAATATCAAGTGGCTTGTGACTAAATTGGACACAAGTCACCTTTGGTACTAATTAGTAGTGTATTGGTATAACAATAACACACTAGTTCAATATCAATACCAAATTAATCAGTACCAATACGAGTCACTTGCGTCCATTTTGAGCACAAACAACTTTTGACATAGACTTCCTATTCCCAGACTACGATCACTGAAAAAGTCTACTTTTTCAAAATAAATAAACACTTGGCGCGTTAGTGGGTTTCTTTCCTGGTCGCATATGCCAAAGTGATCTAATCTTTCATTTTTACAATTATGCTATTAGTATTTCTAGTGGGCTATGTTGCATGGGTTCTTCACAATACCTTAAATTCCATTTTCTTAAAATGATCATGTTGACACGGGTATGGAGTATGACTCAGGATAAATGATACAAATATCTTGGGAAGTGGCTTGGTCGAAAAGATATACCCGTGTTGGATGTTTGTAGCAGAGTTCATGTGACATAGCCTGTCTTCCTCAGCTTGAAAAAAGCCAGCTTAATGAGGAGATATGTATATAGATTGTATACATACATGTGAACCTGTGTCATTAGTATCTATTTGTGCAATGACATGATTCAGGGACAATGGAGATTAGGATTCTCAGATGTGGAGCAGTTACAGTCCAAGCCTAATGTTGTGCCAGAAGCAACTTGGAGTTGGATTTGTGGTGCCCAAACTGCTTCCTTTTAGTACTATGTCCTCCATTCCTTTACTTATATTTCTGATTTCTGTTAAGTGCATTGAATGTTTTTTCCATTTGTCGTATGTACTTGTTTTACAATTAATTCCCAATCTGAGTACCTAGGTGCTAGGCTTCCGACCCCCTATATAATTCATCAAAAAATAATAAAAGTCACGTAGGCATACGATGAACCTTTACTTATTTAGCATGATGAAGATTAAGAGATGGAATGGTTCCTAGCTTCCTATAGCTTTTTTATCAAACAACAAGCCTGGTTTTTGCCTGTTAATCACTCTCTTTTTTCCTTTAGCTCTCCATTCCTTACATAACGAACTTTTAGTCTCCACTGGCCAGTCCACAGTGCTGGGATTAGACAAGGCTAGTTTACATATGAATTTTGGAAATATCATAAATGTGTCTGAGGCATATGGTATGAATTAATGGTCTGTACATTTTAAATAACTAACCCCGGTTTTGAATCTCTAAGCTTCTCGAAAAGCACTTGTTACAGTATTCCTTTTCATGCCTAAAGGAATCCATAAGCATTGGATACAAATTTCCAGTAACTCATTTGATATGTACATTAATTATTAGAATTTTTGTGGATTATGAGTTAAGGTAAATATCCAACAGTGTATAACTTGAGATAGTACTGAGTTAAGGTAAATATCCAACAGTGTATAACTTGAGATAGTACTGCAGGAATGTTGTCTCCTAGTAGCCCCTGAATCTATGTCATCACTCTTTCCAATTTTAAATATTCCCTTCCTTTTGTCACATCTTTTTCCATTTCCAATGTAATATAAATGACATGTACTAGGAAGGAAGATAGTAAGGGACTTCTGTCCAGCACAAGAAATGGGACACCTCCTCCAATGGTATAGGTTCCTAGATGCACATACCAGTTGGACTAAAGTAGAACCCTGAATACTAGACACCATGAAGGGACAGGAACCTCACTCTTGTTTTAAATATAAACACTGAAGTTATGGTCATCTTTGGATTTTTTTTTTATTTTTTTTATTGTTATGGTCTGTCATTGAAGGTATCTTGTGTTTGTTTAGCCAGTTTTCACAATTGCCTATATAATTCTTTTTGGATGTTACTACATAAATGGGTCAAACAGGGTGAAAGTAAGTTGTTTTCAGTTTTCACATGGGAATTTTTAATCCTAACAAAACCCATCGAAAGTGAGTTATTTACAGGTTAAAAATATCAACCGTAACCCAACCTAGCACCTGCAGCTTATTAAGTGACATCACCATTAATTGATATGGTCAAAGAATAAGATGTTATTTAATGCTCGTTCTGTCTCATTCAGTTCACCGACTATTCCTTCTTTGGCCGGTCTAAAATGTTCGCACGTTTTTCTTGTTCCTACATATACAATCAAGTAAGTTCTTTTCCTTTTTACATATTTCCTTATTATAGGTATCAATTAATGCATATACAAGTTAATATAATAGTACAAATGCTGGCATAAACCACTTTTACATTTCTGAAGTCATTAAAGATACTACTTTCATACGGAGTAATTTTTAACTAGTTCTTTAATAGGTGTTTTTCTTTCTCAACTAATGAAACATTTTTGGAATGAAGGGAGTAGTAGGACGGTCCCAATTGTGTTTGCATCTAAAAGAATCTAACTCGACAACATCAAACGAGTGTAAAAGGCTCCCATCAATAACGTCAAGGGTCCCCAATATACGTAAATATCACTCCAACAGCCTTACTACAATCTCAACTGAGACTGTGGCCACAATGCTTATAAAGGAGATTTGGTCTAATGGCAAGTTGGAAATGTATGTGTAAAATACTTCTCCTTAAACAGTAGTGATACATTAATAGATTTCTTATAGGTTCTTACTTAAATTTAGTAACAACTATTAAAGGAGATATTTTCTAAAATTATATCAAATCTTCCATCATGGAGGTTAGGAATCCAAACTATGTGATGATTGTGAACTAACATTGGAAGGAGGGTGTAGTTAAGACTTAAGAGAAAGGACGTATAATAGATAAGCTAAAACTGTTAACATGACACAACCAGCTTTGTGACATATATTTTTTTATGATCAGCCAATTTGCTAGGCGTGATTAGTTAGCTACCCGGGGAACCGAATTGAGATATTGGTGTAAAAAAAAAGCAGGGTTACCAAATTGGTATGTAAAAATCCGTTCACTTTAAGTTGTATAAAACGAAGGGGAACCCTAGGCCTTTTATTTCGTCAGAAAAATGTGCAGCATGAGTTACTTTTTCCATTTTTCCCCTTTTGTTTCCCTCGGATTTCTCCTGTTTTCCTTAATGCTCTGATCCTCTTCCTCAACTTCCACTTAACTTTCCCCTTCCATTGCTCCTTAATCCTTTTTTTAGCTGTGCAAACACAAACCACCCATCCCATTGTCCCCCCTCTCTCACCAAACTTAATCCACAAATAGTTAATCACTGATTAGTCTACAGATGGGAGATGATGTATTAATTGATATTATGAAGCTTTATCTAGAAGCCTAGAACCTTCCACATAAGAGAACTTTGGGAATTTGATTAGAGAACACCAAAATTGAATTACCCGATTTATTCTGCCCACAAATCATGACAAACCAACACAGAAAACAAGGAATGCATTTCCACCTTGAAAAAGGGATACATTTGTGGCCGTAGAATGCACGCGCCACATAACGAAACCTGACAACAACAAAAAGAAGCCTAGGAGGAAGGAGCAAAGGGAAACAATGAAGAAAAGGCAGTAGAATGCACGCGCCACATATACCTGACAACAACAAAAAGAAGCCTAGGAGGAAGGAGCAAAGGGAAACAATGAAGAAAAGGCAGTAGAATGCACGCGCCACATATAACGAAACCTGACAACAACAAAAAGAAGCCTAGGCCTATATGTTGCTCTTCGTTTTTTTAGTACCTTAAAGTAGCCAAAGGATTGTTTTACTCTAATCTATACTATATATTAAAAGGCGTTTATAAAATAGCATACGTGACACGTGGCGCTCTGCTTATGGGTCGTTCGCTCCATGTAAGCTTTATATACATTAAAAAAAATGTCAAATATGATTAGCATAAGGTTTGAACTCTTGATCTTGAGTTTAAACAATAAAGCTTTTACCACCAAGCTATTAAATATTTCATGTTATCATTGCAAAAAAAAAGTTATATATAAGTAAATGTGAATGTTGTTAATGTAGTAACCCGGGGCATCGCCCGGGCCAAAAAACTAGTTGTTTGTTAAACCAACACAGAAAGCCCTTTCAATTTTATATAATCTAGTCTTGGGGGATCTGGGGATAGGATTCACCATAGCCACATGGGTAGGATGTGGTCTGGTTTGGTCCATTGGATCCAAGACCGCCCCACTAGGTAGGCTTGACCAGATTTGGCACGAGCCAATTTTGGCTGAACCTTGAGCTGATCTTGTGCCTGGTTTTGATTCCGTTATACCCATATGTTCCTTGAATCGCTTCATGTCGTGGTTTATTTTCTCTTGGCTCTGTATTCCTGGAAGTGCCTGGTTTGACCTGTGAGTTGGTTGGGACAAACCAACCCAGAACACAAATCATGTCTGCAATGTACATTTATACACAGATTGTTTTGAATTCCCTGCAGTGTCATACCTTTTGTTATTCAAAACCCAATTCCAAGTTTTTAAGAATGTTGCATGGATGGGTGATATTTGAAAAAAGGGTTTTCCTTCAAGGCTTCAATTGCTTCAATATATCTCTCCTTTTACTTCTTTGGATACTTCCTCAGGGCAGCTTTGCCCCCACATAACTTCTTAAAGAGTTATACATGACTGCTTTGATGTTACTTGGGACTTGTGAGGTCATCATCATTAAATTTTGAACTACGGTTGAATAAGGGCCAACCATATGCAAATTTAGTTTGTATGATTCATTAATTTGGCTGATACCTGTGGTTTTAACAGTTAAAGCATAAGGAACGTGGAACTCAATGTGAAAGTTCTTGCTTAGTCTAGTAAGTGAACAGAATTGTTTTGTTTTATATATGGAACCTACAACCTGCCCTTGTATTTTCTATAGTCTATATAATCATGAATGCCATTGACCTGGTTTTTTTTTGTTTATAATTACTTTTAATACCATTAATTTGTGTGACCTTTTTCTTGTAAATTACTGCCATAAACTTCTAATATGACTCAATTCTACCTTCAACCAGTCACCATTTTGTCAAGTTAGAGAATTATGGGATTAAGCGAGGTTCAATTCTGGTCATGCTTTTAAAGGCATTGTTTTGTAAGAGAAGTTATAAAAAAGTTTCAGAAAGTACATATGGTTGGCTGTTTGCCATATAAATGGTAGTGTTGAACAAACTTTTCGTTTACTTGAGCTGCATATGCGTCTTGCTTGTGTATAAATTGCTGTCTGGGCCCTTTTTTTGCCGAGTGGCCTTTTTTTCAATTGAATATATGGACTTACACTAGGAAACGCGGAGTGTCAAAGTGATTCTGGAAAGTACAACTCCTTCCGGTAAGTTTTTACCCCACTGCTTGAATTTAGGGCATGCTTACCAGCTTGGGTTGTTGTTAATGTAAGGGCGTAACAAAAGAAAAAAAAAATGAAGGTGGGTGGATGTGGTGGTGGATTTGATGCGGCAGTGATTGTGTAAGGAGAGAGGAATGGGGGTAATAGTTACCCACCTGTCTCAACACATCACCTAGGGTAATATATTCCCTCCCTCCCTCCCTCTTGCATTATCACTACATAATCCCATTTGCCACCACCTAAAACTCCTTTTCATTTTCTTCCTTTTGTCTATGCCATACAATGTCCTACTTGATTGTTTTGGAGTACTATGATGTAGCTTAAGTTGCTAAATTGTGTATGCGTTGAATTTTTTTGATGTGGCGGTGATATTTATTTGAACTCCGCCAAATCGCCAAATCACTGGGAAATAGTATATTCTTTGATTGAGTTTACAACTTGGTAACACACAAATATAGACAGCTACAAACAGTGTGGAAGCCTTGTTTTGTAGATACAGGAGCTGAGTTGCTCATTTCAGCCTACAATAGTTGATTGACTCCAATTGTATTTCTTATTCAATTCTTGTTTTCTCTTTTCCTCTGTTTATTTATACTTAAAACTTTGCTTACGTGGATGATTAAAACAACTGTATTACAGATGTTCAGTGTGCCTAGGGGATTATCAAGCAGAAGATAGGCTTCAACAGATACCTGGTTGTTGTCATACATTTCATCTGAACTGCATCGACCTTTGGCTAGCAACTCATACCACTTGCCCACTCTGTCGCCTTTCCCTTATCAGTCCATCTAAAACTCCCCCATCTTTAGAGCCTGATAGTAATATTCAGATTGACAGTAGATTGGAAGACCCAGAAAATGTAGATGATGACGTCCTTCGGCTAAACAGATTGCAGGTTTTGTAAGAGTTGACTCTCTTTTACGGATTGCAGGTTTTGTAAGAGTTGACTCTCTTTTACGGGAGAAACAGGGACGTAAGAGATGATTCTATAGAAGTTAGGAAGACTAGGAACCTGTACAGGGAACTCAAAAGGTAGGATACAAGATGAACCGATTAGCAAATTACAGTGCCCGGATTGTGGGGGTGGATGAGTTCTGTTATGCTGGAACAGTTGCCACAAGTTAAGTGAGAAAGTAAGGAGATTTCCCTTGAAACTGATACATCTGAACTCATACATCAATGTAAAACCAAAAGCATTGTATCGTTGCCATTGTTTAGCGACCGAGGAACCTGTACTTGTCCAGAGAGGACTACTGATTGTATGTTATCTCTTTGTATTACTATGTAAAAGTATGTTAAACAAATAAGCAATTAAGTTTTCATGTAGTTCTAGACTTCTAGTGTAACTGTGTAATTTTGTATAATATGTAAAAATTATGAATTTCTTTTCTTTTTCATTCTTTCTTGTGTATAAAGTTGTTTCTTGGCAACCAGCAAATCAGAGAATTGTTGTTGGGACAAACCAGCTGAACTCTTTTCGACAGATTAAGGATCACAGGGGCATAAATATAACAAAACTGCTCCCATAAGTTTCGTGATGTAACATTTGTTAGTTTGGTTCGGCTTGTTAAACATTTGAATTATTTGTTCTTGTAATTCATGTGATTTTGTGTAATCTGAGCACGAG

mRNA sequence

TTCCGTCATGTCAGAAAATTTGTCCCATTATTTGACAGATGGAATTGCATGCTGCACTCTTCCGGATAAACTATATTCGCCTTCATTTCTTATAACATCACTATCAATTTCCCAATCACAAATACTACGAATTTCACTATTTTTTAGTATAAATCTGCTCGGATCTTCCCTAAATTCGGGGAATCATTAGATATTTTCCTTCAATTTATCAGTAATTTCATCTATAAAACCCTAATTTCCGACATTTTCCCCCCAGAATTCTGCTTTTTTGATCTGTAAATGTCCCCTTCAAATGCATCCTACAATGGTAGGAGAAGCAGCGGAAATCGCCGCATTATAGAATCGAGTCCATTTGAAACGGAATCGAGTATAATTAGTAGCAGAAATGACGGTGGCGGTGGCGGTGGTAGTGATAGTCATACAGAATCATTGAAATTGTATGAAGCAATTATATTTTCTGGACCAATTGTGTTCACATTGATCATAATTTTCTTGTTTTACTTCTTCTATCTCCGCCGTCATAGTGTGGATTGGTCTTCTCTTCGTATGCGTGCTTCGAATTCTGCTGCCGTAGCCGCCGCCGCTACCGATGGCGTTGAGGTGGTTGAGCTGGGGTTGAAGAAAGAATTTAGGGAGATGCTGCCAATAATCGTGTTTAAGGAGAGCTTTTCTGTTAGAGACACACAATGTTCAGTGTGCCTAGGGGATTATCAAGCAGAAGATAGGCTTCAACAGATACCTGGTTGTTGTCATACATTTCATCTGAACTGCATCGACCTTTGGCTAGCAACTCATACCACTTGCCCACTCTGTCGCCTTTCCCTTATCAGTCCATCTAAAACTCCCCCATCTTTAGAGCCTGATAGTAATATTCAGATTGACAGTAGATTGGAAGACCCAGAAAATGTAGATGATGACGTCCTTCGGCTAAACAGATTGCAGGTTTTGTAAGAGTTGACTCTCTTTTACGGATTGCAGGTTTTGTAAGAGTTGACTCTCTTTTACGGGAGAAACAGGGACGTAAGAGATGATTCTATAGAAGTTAGGAAGACTAGGAACCTGTACAGGGAACTCAAAAGGTAGGATACAAGATGAACCGATTAGCAAATTACAGTGCCCGGATTGTGGGGGTGGATGAGTTCTGTTATGCTGGAACAGTTGCCACAAGTTAAGTGAGAAAGTAAGGAGATTTCCCTTGAAACTGATACATCTGAACTCATACATCAATGTAAAACCAAAAGCATTGTATCGTTGCCATTGTTTAGCGACCGAGGAACCTGTACTTGTCCAGAGAGGACTACTGATTGTATGTTATCTCTTTGTATTACTATGTAAAAGTATGTTAAACAAATAAGCAATTAAGTTTTCATGTAGTTCTAGACTTCTAGTGTAACTGTGTAATTTTGTATAATATGTAAAAATTATGAATTTCTTTTCTTTTTCATTCTTTCTTGTGTATAAAGTTGTTTCTTGGCAACCAGCAAATCAGAGAATTGTTGTTGGGACAAACCAGCTGAACTCTTTTCGACAGATTAAGGATCACAGGGGCATAAATATAACAAAACTGCTCCCATAAGTTTCGTGATGTAACATTTGTTAGTTTGGTTCGGCTTGTTAAACATTTGAATTATTTGTTCTTGTAATTCATGTGATTTTGTGTAATCTGAGCACGAG

Coding sequence (CDS)

ATGTCCCCTTCAAATGCATCCTACAATGGTAGGAGAAGCAGCGGAAATCGCCGCATTATAGAATCGAGTCCATTTGAAACGGAATCGAGTATAATTAGTAGCAGAAATGACGGTGGCGGTGGCGGTGGTAGTGATAGTCATACAGAATCATTGAAATTGTATGAAGCAATTATATTTTCTGGACCAATTGTGTTCACATTGATCATAATTTTCTTGTTTTACTTCTTCTATCTCCGCCGTCATAGTGTGGATTGGTCTTCTCTTCGTATGCGTGCTTCGAATTCTGCTGCCGTAGCCGCCGCCGCTACCGATGGCGTTGAGGTGGTTGAGCTGGGGTTGAAGAAAGAATTTAGGGAGATGCTGCCAATAATCGTGTTTAAGGAGAGCTTTTCTGTTAGAGACACACAATGTTCAGTGTGCCTAGGGGATTATCAAGCAGAAGATAGGCTTCAACAGATACCTGGTTGTTGTCATACATTTCATCTGAACTGCATCGACCTTTGGCTAGCAACTCATACCACTTGCCCACTCTGTCGCCTTTCCCTTATCAGTCCATCTAAAACTCCCCCATCTTTAGAGCCTGATAGTAATATTCAGATTGACAGTAGATTGGAAGACCCAGAAAATGTAGATGATGACGTCCTTCGGCTAAACAGATTGCAGGTTTTGTAA

Protein sequence

MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRLSLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17854.1	Spo17854.1	mRNA

Homology

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BLAST of Spo17854.1 vs. NCBI nr
Match: gi|902212595|gb|KNA17030.1| (hypothetical protein SOVF_083800 [Spinacia oleracea])

HSP 1 Score: 436.4 bits (1121), Expect = 3.000e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


		  
Query: 1   MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS 60
           MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS
Sbjct: 1   MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS 60

Query: 61  GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM 120
           GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM
Sbjct: 61  GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM 120

Query: 121 LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL 180
           LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL
Sbjct: 121 LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL 180

Query: 181 SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL 224
           SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL
Sbjct: 181 SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL 223

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BLAST of Spo17854.1 vs. NCBI nr
Match: gi|731312946|ref|XP_010677163.1| (PREDICTED: RING-H2 finger protein ATL7 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 293.9 bits (751), Expect = 2.400e-76
Identity = 162/225 (72.00%), Postives = 184/225 (81.78%), Query Frame = 1


		  
Query: 1   MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS 60
           MS S+A+Y  RRSS  R I+ES+  E ++S I+S ++   GG S+  TE++KLYEAIIFS
Sbjct: 1   MSSSDATYISRRSS--RGIVESNSIEGDASTITSSSNSNNGGVSN--TETIKLYEAIIFS 60

Query: 61  GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDG--VEVVELGLKKEFR 120
           GPIVFTLII+FLFYFFYLRRHSVDWSSLRMRASNSAA AA A D   V V ELGLKKEFR
Sbjct: 61  GPIVFTLIILFLFYFFYLRRHSVDWSSLRMRASNSAAAAAVADDSNDVGVAELGLKKEFR 120

Query: 121 EMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLC 180
           EMLPIIVF ESFSVRDTQCSVCLG+YQAED+LQQIP C HTFHLNCID WLAT +TCPLC
Sbjct: 121 EMLPIIVFTESFSVRDTQCSVCLGEYQAEDKLQQIPVCGHTFHLNCIDHWLATRSTCPLC 180

Query: 181 RLSLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL 224
           R SL+S SKTPP+ E DSN Q DSR +  ENV DD+LR NRLQ++
Sbjct: 181 RRSLVSESKTPPASESDSNNQTDSRFDSTENV-DDILRRNRLQII 220

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BLAST of Spo17854.1 vs. NCBI nr
Match: gi|747045642|ref|XP_011095207.1| (PREDICTED: RING-H2 finger protein ATL7-like [Sesamum indicum])

HSP 1 Score: 206.5 bits (524), Expect = 5.000e-50
Identity = 111/180 (61.67%), Postives = 132/180 (73.33%), Query Frame = 1


		  
Query: 33  SSRNDGGGGGGSDSHTES-LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMR 92
           +S N  G      S   S LKLY+A IFS PI+FT I++ LFYFFYLR   VDWSSLRMR
Sbjct: 14  TSNNGTGNAANCCSRASSQLKLYQAFIFSVPILFTFILLLLFYFFYLRPRRVDWSSLRMR 73

Query: 93  ASNSAAVAAAATDGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQ 152
             N    + ++ D +   ELGLKKE REMLP+IVFKESFSV+DTQCSVCLGDYQAEDRLQ
Sbjct: 74  TGNFMPTSESSDD-ISRCELGLKKELREMLPVIVFKESFSVKDTQCSVCLGDYQAEDRLQ 133

Query: 153 QIPGCCHTFHLNCIDLWLATHTTCPLCRLSLISPSKTPPSL-EPDSNIQIDSRL--EDPE 209
           QIP C HTFH++CIDLWLATHTTCPLCR SL++ +K+P +   PDS ++ D     EDP+
Sbjct: 134 QIPSCGHTFHMDCIDLWLATHTTCPLCRKSLLASTKSPCAHGVPDSRVETDGGTCDEDPQ 192

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BLAST of Spo17854.1 vs. NCBI nr
Match: gi|223538962|gb|EEF40559.1| (protein with unknown function [Ricinus communis])

HSP 1 Score: 198.4 bits (503), Expect = 1.400e-47
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI FT +++FLFY FYLRR  VDW+SLRMRA+         +D +   E
Sbjct: 26  LKLYQAFIFSVPIFFTFVLLFLFYLFYLRRRRVDWASLRMRAN------LQGSDNIFRAE 85

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           LGLKKE REMLPIIV+KESFSV+DTQC VCLGDYQAEDRLQQIP C HTFH+ CID WLA
Sbjct: 86  LGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACGHTFHMVCIDHWLA 145

Query: 171 THTTCPLCRLSLISPSKTPPSLEPDSNIQ 200
            HTTCPLCRLSL++P+K P    P++ ++
Sbjct: 146 NHTTCPLCRLSLVAPAKVPTE-SPNNQVE 167

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BLAST of Spo17854.1 vs. NCBI nr
Match: gi|1000959464|ref|XP_015576380.1| (PREDICTED: RING-H2 finger protein ATL7 [Ricinus communis])

HSP 1 Score: 198.4 bits (503), Expect = 1.400e-47
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI FT +++FLFY FYLRR  VDW+SLRMRA+         +D +   E
Sbjct: 26  LKLYQAFIFSVPIFFTFVLLFLFYLFYLRRRRVDWASLRMRAN------LQGSDNIFRAE 85

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           LGLKKE REMLPIIV+KESFSV+DTQC VCLGDYQAEDRLQQIP C HTFH+ CID WLA
Sbjct: 86  LGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACGHTFHMVCIDHWLA 145

Query: 171 THTTCPLCRLSLISPSKTPPSLEPDSNIQ 200
            HTTCPLCRLSL++P+K P    P++ ++
Sbjct: 146 NHTTCPLCRLSLVAPAKVPTE-SPNNQVE 167

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BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC35_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083800 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.100e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


		  
Query: 1   MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS 60
           MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS
Sbjct: 1   MSPSNASYNGRRSSGNRRIIESSPFETESSIISSRNDGGGGGGSDSHTESLKLYEAIIFS 60

Query: 61  GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM 120
           GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM
Sbjct: 61  GPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKKEFREM 120

Query: 121 LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL 180
           LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL
Sbjct: 121 LPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLATHTTCPLCRL 180

Query: 181 SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL 224
           SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL
Sbjct: 181 SLISPSKTPPSLEPDSNIQIDSRLEDPENVDDDVLRLNRLQVL 223

[Close]

BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Match: B9S6Y0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329400 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.500e-48
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI FT +++FLFY FYLRR  VDW+SLRMRA+         +D +   E
Sbjct: 26  LKLYQAFIFSVPIFFTFVLLFLFYLFYLRRRRVDWASLRMRAN------LQGSDNIFRAE 85

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           LGLKKE REMLPIIV+KESFSV+DTQC VCLGDYQAEDRLQQIP C HTFH+ CID WLA
Sbjct: 86  LGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACGHTFHMVCIDHWLA 145

Query: 171 THTTCPLCRLSLISPSKTPPSLEPDSNIQ 200
            HTTCPLCRLSL++P+K P    P++ ++
Sbjct: 146 NHTTCPLCRLSLVAPAKVPTE-SPNNQVE 167

[Close]

BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Match: A0A161WRT6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010109 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.200e-47
Identity = 105/174 (60.34%), Postives = 124/174 (71.26%), Query Frame = 1


		  
Query: 42  GGSDSHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAA 101
           G   S +  LKLY+A IFS PI FT I++F FY FYLRR   DWSSLRMR +  A +   
Sbjct: 18  GCCSSLSAQLKLYQAFIFSVPIFFTFILLFFFYLFYLRRRRADWSSLRMRTARLATIQ-- 77

Query: 102 ATDGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFH 161
             + +   E+GLKKE REMLPIIVFKESFSV+DTQCSVCLGDYQAED+LQQIP C HTFH
Sbjct: 78  --NNISTCEMGLKKEVREMLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFH 137

Query: 162 LNCIDLWLATHTTCPLCRLSLISPSKTPPSLEPDSNIQIDSRLEDP--ENVDDD 214
           + CIDLWLATHTTCPLCRLSL++   +    +  SN + D   E P  EN D++
Sbjct: 138 MECIDLWLATHTTCPLCRLSLLASRASEKPTDNQSN-ETDQSPESPDVENHDEN 186

[Close]

BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Match: D7SMW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g00860 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.800e-46
Identity = 107/188 (56.91%), Postives = 127/188 (67.55%), Query Frame = 1


		  
Query: 46  SHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRAS--NSAAVAAAAT 105
           S +  LKLY+A IFS PI FT I++ LFY FYLRR  VDW+SLRMR+S  N A  A+   
Sbjct: 13  SASAELKLYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWASLRMRSSMQNDADHASG-- 72

Query: 106 DGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLN 165
               V ELGLKKE REMLPIIVFKESFSV DTQCSVCL DYQAEDRLQQIP C HTFH++
Sbjct: 73  ----VSELGLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQIPACGHTFHMD 132

Query: 166 CIDLWLATHTTCPLCRLSLISPSKTP----------PSLEPDSNIQIDSRLEDPENVDDD 222
           CID WLATHTTCPLCRLSL + ++TP          P        Q D+++  P N ++ 
Sbjct: 133 CIDHWLATHTTCPLCRLSLTAAARTPAEPLTILVETPHGTSPEQTQPDTQVSQPRNENER 192

[Close]

BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Match: V4T493_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021842mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.300e-46
Identity = 100/171 (58.48%), Postives = 119/171 (69.59%), Query Frame = 1


		  
Query: 44  SDSHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAAT 103
           S S +  LK+Y+A IFS PI FT I++ LFY FYLRR  VDWSSLRMR S    +     
Sbjct: 15  SSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTS----LHTNNV 74

Query: 104 DGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLN 163
           D +   ELGLKKE REMLPI+++KESFS+RDTQCSVCL DYQAED+LQQIP C H FH++
Sbjct: 75  DEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMD 134

Query: 164 CIDLWLATHTTCPLCRLSLISPSKTPPSLE--PDSNIQIDSRLEDPENVDD 213
           CID WL THTTCPLCRLSL++P+K    L       IQ  S  E+ +   D
Sbjct: 135 CIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENADGASD 181

[Close]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Match: ATL7_ARATH (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.900e-43
Identity = 84/143 (58.74%), Postives = 106/143 (74.13%), Query Frame = 1


		  
Query: 44  SDSHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHS---VDWSSLRMRASNSAAVAA 103
           + + +E LKLY+A IFS PI FT I++F+ Y  YLRR+S   VDWSSL MR         
Sbjct: 19  NSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPT-- 78

Query: 104 AATDGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTF 163
              + +   ELGL K+ REMLP++++KESF V+D+QCSVCLGDYQAE++LQQ+P C HTF
Sbjct: 79  --NNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTF 138

Query: 164 HLNCIDLWLATHTTCPLCRLSLI 184
           H+ CIDLWL +HTTCPLCRLSLI
Sbjct: 139 HMECIDLWLTSHTTCPLCRLSLI 157

[Close]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Match: ATL58_ARATH (RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.700e-42
Identity = 92/156 (58.97%), Postives = 110/156 (70.51%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI FT II+FLFY  YLRR S D SSL MR +          + +  +E
Sbjct: 20  LKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRTTFIPG------NSLSTIE 79

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           LGL KE REMLPI+VFKESF+V D+QCSVCLGDYQ  D+LQQIP C HTFH++CIDLWL 
Sbjct: 80  LGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLT 139

Query: 171 THTTCPLCRLSLISPSKT--------PPSLEPDSNI 199
           +HTTCPLCRL+LI PS++        P  + PD  +
Sbjct: 140 SHTTCPLCRLALI-PSRSRQSQDDPVPSLVSPDEEV 168

[Close]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Match: ATL59_ARATH (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.200e-33
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 1


		  
Query: 48  TESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHS---VDWSSLRMRASNSAAVAAAATD 107
           TES  L    I   PI   LI++ + Y   +RR+S   VDWSSL               +
Sbjct: 15  TESQILKFTFIVCVPICVILIVLLVLYI--MRRNSNTNVDWSSL--------GGFVPTNN 74

Query: 108 GVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNC 167
            +   ELGL K+ REMLPI+++KESF+V DTQCSVCLGDYQAE++LQQ+P C HTFH+ C
Sbjct: 75  NLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMEC 134

Query: 168 IDLWLATHTTCPLCRLSLISPSKTPPSLE-PDSNIQIDSRLED 207
           IDLWL +HTTCPLCRLSLI      PS++    +I+I S +E+
Sbjct: 135 IDLWLTSHTTCPLCRLSLI----PKPSVDLSHQSIEIVSSIEN 163

[Close]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Match: RHA4A_ARATH (Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana GN=RHA4A PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.500e-25
Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI+F++I+  LFY FYL+R +   SS        ++    ++    V  
Sbjct: 19  LKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPSVCL 78

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           L +K E ++ L +++F E    RD+ C VCLG+++ ++ L ++P C H FHL+CI LWL 
Sbjct: 79  LDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLY 138

Query: 171 THTTCPLCRLSLISPSKTPPSLEPDSN 198
           +H TCPLCR S +S S T  S++ D++
Sbjct: 139 SHNTCPLCR-SSVSISSTKTSVDDDND 164

[Close]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.500e-14
Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 1


		  
Query: 62  PIVFTLIIIFLFYFF------YLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKK 121
           P+V  + ++FL  FF      + RR +  +S   +  S  A   +       +   GL  
Sbjct: 50  PVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDA 109

Query: 122 EFREMLPIIVFKESFSVR----DTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLAT 181
           E  E  P  ++ E  +VR      +C+VCL +++ ++ L+ +P CCH FH +C+D+WL+ 
Sbjct: 110 EAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSE 169

Query: 182 HTTCPLCRLSLI 184
           H+TCPLCR  L+
Sbjct: 170 HSTCPLCRADLV 181

[Close]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Match: AT4G10150.1 (RING/U-box superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 3.300e-44
Identity = 84/143 (58.74%), Postives = 106/143 (74.13%), Query Frame = 1


		  
Query: 44  SDSHTESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHS---VDWSSLRMRASNSAAVAA 103
           + + +E LKLY+A IFS PI FT I++F+ Y  YLRR+S   VDWSSL MR         
Sbjct: 19  NSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPT-- 78

Query: 104 AATDGVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTF 163
              + +   ELGL K+ REMLP++++KESF V+D+QCSVCLGDYQAE++LQQ+P C HTF
Sbjct: 79  --NNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTF 138

Query: 164 HLNCIDLWLATHTTCPLCRLSLI 184
           H+ CIDLWL +HTTCPLCRLSLI
Sbjct: 139 HMECIDLWLTSHTTCPLCRLSLI 157

[Close]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Match: AT1G33480.1 (RING/U-box superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 9.700e-44
Identity = 92/156 (58.97%), Postives = 110/156 (70.51%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI FT II+FLFY  YLRR S D SSL MR +          + +  +E
Sbjct: 20  LKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRTTFIPG------NSLSTIE 79

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           LGL KE REMLPI+VFKESF+V D+QCSVCLGDYQ  D+LQQIP C HTFH++CIDLWL 
Sbjct: 80  LGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLT 139

Query: 171 THTTCPLCRLSLISPSKT--------PPSLEPDSNI 199
           +HTTCPLCRL+LI PS++        P  + PD  +
Sbjct: 140 SHTTCPLCRLALI-PSRSRQSQDDPVPSLVSPDEEV 168

[Close]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Match: AT4G10160.1 (RING/U-box superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.400e-34
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 1


		  
Query: 48  TESLKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHS---VDWSSLRMRASNSAAVAAAATD 107
           TES  L    I   PI   LI++ + Y   +RR+S   VDWSSL               +
Sbjct: 15  TESQILKFTFIVCVPICVILIVLLVLYI--MRRNSNTNVDWSSL--------GGFVPTNN 74

Query: 108 GVEVVELGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNC 167
            +   ELGL K+ REMLPI+++KESF+V DTQCSVCLGDYQAE++LQQ+P C HTFH+ C
Sbjct: 75  NLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMEC 134

Query: 168 IDLWLATHTTCPLCRLSLISPSKTPPSLE-PDSNIQIDSRLED 207
           IDLWL +HTTCPLCRLSLI      PS++    +I+I S +E+
Sbjct: 135 IDLWLTSHTTCPLCRLSLI----PKPSVDLSHQSIEIVSSIEN 163

[Close]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Match: AT4G24015.1 (RING/U-box superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.300e-26
Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = 1


		  
Query: 51  LKLYEAIIFSGPIVFTLIIIFLFYFFYLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVE 110
           LKLY+A IFS PI+F++I+  LFY FYL+R +   SS        ++    ++    V  
Sbjct: 19  LKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPSVCL 78

Query: 111 LGLKKEFREMLPIIVFKESFSVRDTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLA 170
           L +K E ++ L +++F E    RD+ C VCLG+++ ++ L ++P C H FHL+CI LWL 
Sbjct: 79  LDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLY 138

Query: 171 THTTCPLCRLSLISPSKTPPSLEPDSN 198
           +H TCPLCR S +S S T  S++ D++
Sbjct: 139 SHNTCPLCR-SSVSISSTKTSVDDDND 164

[Close]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Match: AT2G35000.1 (RING/U-box superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 8.500e-16
Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 1


		  
Query: 62  PIVFTLIIIFLFYFF------YLRRHSVDWSSLRMRASNSAAVAAAATDGVEVVELGLKK 121
           P+V  + ++FL  FF      + RR +  +S   +  S  A   +       +   GL  
Sbjct: 50  PVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDA 109

Query: 122 EFREMLPIIVFKESFSVR----DTQCSVCLGDYQAEDRLQQIPGCCHTFHLNCIDLWLAT 181
           E  E  P  ++ E  +VR      +C+VCL +++ ++ L+ +P CCH FH +C+D+WL+ 
Sbjct: 110 EAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSE 169

Query: 182 HTTCPLCRLSLI 184
           H+TCPLCR  L+
Sbjct: 170 HSTCPLCRADLV 181

The following BLAST results are available for this feature:

BLAST of Spo17854.1 vs. NCBI nr
BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
BLAST of Spo17854.1 vs. TAIR (Arabidopsis)

BLAST of Spo17854.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902212595\|gb\|KNA17030.1\|	3.0e-119	100.	hypothetical protein SOVF_0838...	[more]
gi\|731312946\|ref\|XP_010677163.1\|	2.4e-76	72.0	PREDICTED: RING-H2 finger prot...	[more]
gi\|747045642\|ref\|XP_011095207.1\|	5.0e-50	61.6	PREDICTED: RING-H2 finger prot...	[more]
gi\|223538962\|gb\|EEF40559.1\|	1.4e-47	65.7	protein with unknown function ...	[more]
gi\|1000959464\|ref\|XP_015576380.1\|	1.4e-47	65.7	PREDICTED: RING-H2 finger prot...	[more]

BLAST of Spo17854.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RC35_SPIOL	2.1e-119	100.	Uncharacterized protein OS=Spi...	[more]
B9S6Y0_RICCO	9.5e-48	65.7	Putative uncharacterized prote...	[more]
A0A161WRT6_DAUCA	1.2e-47	60.3	Uncharacterized protein OS=Dau...	[more]
D7SMW5_VITVI	1.8e-46	56.9	Putative uncharacterized prote...	[more]
V4T493_9ROSI	2.3e-46	58.4	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo17854.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATL7_ARATH	5.9e-43	58.7	RING-H2 finger protein ATL7 OS...	[more]
ATL58_ARATH	1.7e-42	58.9	RING-H2 finger protein ATL58 O...	[more]
ATL59_ARATH	4.2e-33	50.3	E3 ubiquitin-protein ligase AT...	[more]
RHA4A_ARATH	9.5e-25	40.8	Probable E3 ubiquitin-protein ...	[more]
ATL9_ARATH	1.5e-14	31.8	E3 ubiquitin-protein ligase AT...	[more]

BLAST of Spo17854.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G10150.1	3.3e-44	58.7	RING/U-box superfamily protein	[more]
AT1G33480.1	9.7e-44	58.9	RING/U-box superfamily protein	[more]
AT4G10160.1	2.4e-34	50.3	RING/U-box superfamily protein	[more]
AT4G24015.1	5.3e-26	40.8	RING/U-box superfamily protein	[more]
AT2G35000.1	8.5e-16	31.8	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 136..179 score: 1.4
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 137..178 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 137..179 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 134..182 score: 1.6
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 51..209 score: 8.6
None	No IPR available	PANTHER	PTHR22765:SF29	E3 UBIQUITIN-PROTEIN LIGASE ATL59-RELATED	coord: 51..209 score: 8.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 121..188 score: 1.57

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045859	regulation of protein kinase activity
cellular_component	GO:0005956	protein kinase CK2 complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019887	protein kinase regulator activity
molecular_function	GO:0004518	nuclease activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09150	0.66	Barchart \| Table
Spo09762	0.66	Barchart \| Table
Spo19830	0.66	Barchart \| Table
Spo10895	0.65	Barchart \| Table