Spo17911 (gene) | SpinachBase

Overview


Name	Spo17911
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	chr1 : 13433283 .. 13434583 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCATTTTAGCCATTGAAGAGAGAGAGAGAGAGAATGGAAAACATCACAGCAAGTGAAATAGCAGGTCTTGGTGTAGGCACCTTCCTCCTTTGTGCCACCATTGCCGCCCCTAAAGTTGATTCCTTTATCTCCTCTTCCCAAAGAAGGTACACTTCTAATTTTGATTTGTTAAATTATCATCTCCTTTTGTCCGAATTAATAGTCGCCTTAATAGTGTAATTTGGTAATAGCTGAACAGGGAAGGATGAAGTACTTTTTTTATGTCTCTGTTTTAGCGAGATTAATATTGAGTCGTTGTTGTTTTAATTTGCAGTTCATTGAAAATGTGCAACCGATGTGGGGATGTAAAACTGATAGCTTGCAAAAAATGTAAAGGATCCGGGGCAGTTAAACCGGGTGGTTTATTTGGATTGAGTAATCCAATGGAAGATTTATTTCCGGGTCGATTCGAATCGAATAAGGGTTCCATTTCTTGTGTTAATTGTGGAGCTAAGGGTCATTTTCCCTGCCCTCAATGTTACCAAAGTTCGTCCTCATCTTCTGAGCAGTAATAAGATGACGTACAATTGCAATTGCAATTGCAATTGATACTAATGTAAATGTTAATAGTTGGCAAAGATATTACTCCAATGTTTGTACCTTCATTTGAGTTAGAAGATGTTTTTTACCTTTTTTTATACACTATTGCCCGTACAAGTATGTTTTTAGATGGGAAAATGTAGCAACTGGACACTTCAACTTGTGTGAGACGTGCAATTTAATGACATCGTGTAAGATTAATGTCTTTATTTTGACTTAGTTTTTATGAAACTAGCTTCTGAGCCCGTTTAATGAACGGGTAATTATATAGTGGTTGTTAAACGGTCTTTTAAAATGCTAATTTTGGTGAGGTATTGTGATTTTAGTGGGTTGGAAATTGAAAAAATATACATATTAGATGGTGGATTAAATATCGAGTGTTAAAGAGGGAGATGGAGTGAAAGAAGTTATATGAATTAAATGTTGAATTGATTTTGAGGAAGATGAATTGGGGTGTTACAGCTGTAAAATAACTTGGAAAACAAACCACAAAAGAAAAAATTGAAAAAAAACAAAGTAATGGAGGAAAAATGGAATGACACATGTCATCTGATAATCAATGGTCTTCCTTTTTAAATACTAGGTATTGATAATGCAAATGCGAAATGCTTCTATGCCACGACATGCGTTTGAACAATATTTTTTGACTCCAAACTTCATAAAAGTTAACTAGAAAACTTAAATTATGTTGACCGGTCTAATTAAAAGTTATAGGGGTG

mRNA sequence

TTAGCATTTTAGCCATTGAAGAGAGAGAGAGAGAGAATGGAAAACATCACAGCAAGTGAAATAGCAGGTCTTGGTGTAGGCACCTTCCTCCTTTGTGCCACCATTGCCGCCCCTAAAGTTGATTCCTTTATCTCCTCTTCCCAAAGAAGTTCATTGAAAATGTGCAACCGATGTGGGGATGTAAAACTGATAGCTTGCAAAAAATGTAAAGGATCCGGGGCAGTTAAACCGGGTGGTTTATTTGGATTGAGTAATCCAATGGAAGATTTATTTCCGGGTCGATTCGAATCGAATAAGGGTTCCATTTCTTGTGTTAATTGTGGAGCTAAGGGTCATTTTCCCTGCCCTCAATGTTACCAAAGTTCGTCCTCATCTTCTGAGCAGTAATAAGATGACGTACAATTGCAATTGCAATTGCAATTGATACTAATGTAAATGTTAATAGTTGGCAAAGATATTACTCCAATGTTTGTACCTTCATTTGAGTTAGAAGATGTTTTTTACCTTTTTTTATACACTATTGCCCGTACAAGTATGTTTTTAGATGGGAAAATGTAGCAACTGGACACTTCAACTTGTGTGAGACGTGCAATTTAATGACATCGTGTAAGATTAATGTCTTTATTTTGACTTAGTTTTTATGAAACTAGCTTCTGAGCCCGTTTAATGAACGGGTAATTATATAGTGGTTGTTAAACGGTCTTTTAAAATGCTAATTTTGGTGAGGTATTGTGATTTTAGTGGGTTGGAAATTGAAAAAATATACATATTAGATGGTGGATTAAATATCGAGTGTTAAAGAGGGAGATGGAGTGAAAGAAGTTATATGAATTAAATGTTGAATTGATTTTGAGGAAGATGAATTGGGGTGTTACAGCTGTAAAATAACTTGGAAAACAAACCACAAAAGAAAAAATTGAAAAAAAACAAAGTAATGGAGGAAAAATGGAATGACACATGTCATCTGATAATCAATGGTCTTCCTTTTTAAATACTAGGTATTGATAATGCAAATGCGAAATGCTTCTATGCCACGACATGCGTTTGAACAATATTTTTTGACTCCAAACTTCATAAAAGTTAACTAGAAAACTTAAATTATGTTGACCGGTCTAATTAAAAGTTATAGGGGTG

Coding sequence (CDS)

ATGGAAAACATCACAGCAAGTGAAATAGCAGGTCTTGGTGTAGGCACCTTCCTCCTTTGTGCCACCATTGCCGCCCCTAAAGTTGATTCCTTTATCTCCTCTTCCCAAAGAAGTTCATTGAAAATGTGCAACCGATGTGGGGATGTAAAACTGATAGCTTGCAAAAAATGTAAAGGATCCGGGGCAGTTAAACCGGGTGGTTTATTTGGATTGAGTAATCCAATGGAAGATTTATTTCCGGGTCGATTCGAATCGAATAAGGGTTCCATTTCTTGTGTTAATTGTGGAGCTAAGGGTCATTTTCCCTGCCCTCAATGTTACCAAAGTTCGTCCTCATCTTCTGAGCAGTAA

Protein sequence

MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGSGAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSSSSSSEQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17911.1	Spo17911.1	mRNA

Homology

[Close]

BLAST of Spo17911.1 vs. NCBI nr
Match: gi|902190149|gb|KNA11543.1| (hypothetical protein SOVF_133990 [Spinacia oleracea])

HSP 1 Score: 237.3 bits (604), Expect = 1.400e-59
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS
Sbjct: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSSSSSSEQ 117
           GAVKPGGLFGLSNPMEDLFPGRFESN+GSISCVNCGAKGHFPCPQCYQSSSSSSEQ
Sbjct: 61  GAVKPGGLFGLSNPMEDLFPGRFESNEGSISCVNCGAKGHFPCPQCYQSSSSSSEQ 116

[Close]

BLAST of Spo17911.1 vs. NCBI nr
Match: gi|731349940|ref|XP_010686254.1| (PREDICTED: uncharacterized protein LOC104900525 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.4 bits (516), Expect = 2.200e-49
Identity = 94/115 (81.74%), Postives = 106/115 (92.17%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M+NITASEIAGLGVGTFLLCATIAAPKVDSFISS+QRSSL MC RCGDVKL+ C KCKGS
Sbjct: 1   MDNITASEIAGLGVGTFLLCATIAAPKVDSFISSTQRSSLGMCKRCGDVKLVVCNKCKGS 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSSSSSSE 116
           G++KPGGLFG +NPM++L PGRFESN+  ISCVNC AKGHFPCPQCYQ+S+SS+E
Sbjct: 61  GSIKPGGLFGFTNPMDELLPGRFESNEKPISCVNCKAKGHFPCPQCYQTSTSSAE 115

[Close]

BLAST of Spo17911.1 vs. NCBI nr
Match: gi|645248417|ref|XP_008230288.1| (PREDICTED: uncharacterized protein LOC103329576 [Prunus mume])

HSP 1 Score: 143.3 bits (360), Expect = 2.700e-31
Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M+NITASE+AG GVG  LLCATIAAPKVD+FIS+SQRSSL MC RCG++++IAC +CKG 
Sbjct: 1   MDNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GAVKPGGLFGLSNPMEDLFP--GRFESNKGSISCVNCGAKGHFPCPQCYQSS 111
           G +K GG+FGL N ++D +   G  +S   SISC NC A+GHF CP C ++S
Sbjct: 61  GLIKEGGVFGL-NLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDCSKTS 111

[Close]

BLAST of Spo17911.1 vs. NCBI nr
Match: gi|976925147|gb|KVI09060.1| (hypothetical protein Ccrd_012557 [Cynara cardunculus var. scolymus])

HSP 1 Score: 142.9 bits (359), Expect = 3.500e-31
Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           +E+ITASE+AG GVG  LLCAT++APK+DSFIS+SQRSSL MC RCGD+KLIAC  CKGS
Sbjct: 2   LEHITASEVAGYGVGALLLCATVSAPKIDSFISASQRSSLGMCKRCGDLKLIACSNCKGS 61

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQC 107
           G++K GG+F  S P +  F G  ES   S+SC  C A+GHFPCP C
Sbjct: 62  GSLKQGGMFSFSLPDDVSFVG--ESKTISLSCNKCRARGHFPCPDC 105

[Close]

BLAST of Spo17911.1 vs. NCBI nr
Match: gi|595957289|ref|XP_007216705.1| (hypothetical protein PRUPE_ppa026503mg [Prunus persica])

HSP 1 Score: 142.5 bits (358), Expect = 4.600e-31
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M NITASE+AG GVG  LLCATIAAPKVD+FIS+SQRSSL MC RCG++++IAC +CKG 
Sbjct: 1   MNNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GAVKPGGLFGLSNPMEDLFP--GRFESNKGSISCVNCGAKGHFPCPQCYQSS 111
           G +K GG+FGL N ++D +   G  +S   SISC NC A+GHF CP C ++S
Sbjct: 61  GLIKEGGVFGL-NLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDCSKTS 111

[Close]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXV8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_133990 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 9.600e-60
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS
Sbjct: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSSSSSSEQ 117
           GAVKPGGLFGLSNPMEDLFPGRFESN+GSISCVNCGAKGHFPCPQCYQSSSSSSEQ
Sbjct: 61  GAVKPGGLFGLSNPMEDLFPGRFESNEGSISCVNCGAKGHFPCPQCYQSSSSSSEQ 116

[Close]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EN94_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g181320 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.500e-49
Identity = 94/115 (81.74%), Postives = 106/115 (92.17%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M+NITASEIAGLGVGTFLLCATIAAPKVDSFISS+QRSSL MC RCGDVKL+ C KCKGS
Sbjct: 1   MDNITASEIAGLGVGTFLLCATIAAPKVDSFISSTQRSSLGMCKRCGDVKLVVCNKCKGS 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSSSSSSE 116
           G++KPGGLFG +NPM++L PGRFESN+  ISCVNC AKGHFPCPQCYQ+S+SS+E
Sbjct: 61  GSIKPGGLFGFTNPMDELLPGRFESNEKPISCVNCKAKGHFPCPQCYQTSTSSAE 115

[Close]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Match: A0A118K5H3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012557 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.500e-31
Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           +E+ITASE+AG GVG  LLCAT++APK+DSFIS+SQRSSL MC RCGD+KLIAC  CKGS
Sbjct: 2   LEHITASEVAGYGVGALLLCATVSAPKIDSFISASQRSSLGMCKRCGDLKLIACSNCKGS 61

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQC 107
           G++K GG+F  S P +  F G  ES   S+SC  C A+GHFPCP C
Sbjct: 62  GSLKQGGMFSFSLPDDVSFVG--ESKTISLSCNKCRARGHFPCPDC 105

[Close]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Match: M5WW56_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026503mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.200e-31
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M NITASE+AG GVG  LLCATIAAPKVD+FIS+SQRSSL MC RCG++++IAC +CKG 
Sbjct: 1   MNNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GAVKPGGLFGLSNPMEDLFP--GRFESNKGSISCVNCGAKGHFPCPQCYQSS 111
           G +K GG+FGL N ++D +   G  +S   SISC NC A+GHF CP C ++S
Sbjct: 61  GLIKEGGVFGL-NLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDCSKTS 111

[Close]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Match: W9R9J9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018172 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.200e-31
Identity = 69/110 (62.73%), Postives = 85/110 (77.27%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           MENITASE+AG GVGTFLLCATIAAP+VD+FIS+SQRSSL MC RCG++++IAC KCKG+
Sbjct: 1   MENITASEVAGFGVGTFLLCATIAAPRVDAFISASQRSSLGMCKRCGNLRMIACTKCKGA 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQSS 111
           G ++ G LFGL N ++D       S + S SC NC  +GHF CP+C  SS
Sbjct: 61  GLIRQGSLFGL-NLLDD-------SKRRSTSCTNCQGRGHFSCPECSNSS 102

[Close]

BLAST of Spo17911.1 vs. TAIR (Arabidopsis)
Match: AT5G15802.1 (unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 6.000e-29
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 1


		  
Query: 1   MENITASEIAGLGVGTFLLCATIAAPKVDSFISSSQRSSLKMCNRCGDVKLIACKKCKGS 60
           M+++T++E+AGL VG  LL ATIAAPKVD+FI++SQR SL MC +CGD+K +AC +CKG+
Sbjct: 1   MQSLTSNEVAGLAVGALLLGATIAAPKVDAFIAASQRRSLGMCRKCGDLKNVACGRCKGT 60

Query: 61  GAVKPGGLFGLSNPMEDLFPGRFESNKGSISCVNCGAKGHFPCPQCYQS 110
           G +K GG FG S+           SN  S++C NC AKG FPCP+C +S
Sbjct: 61  GTIKSGGFFGFSD----------SSNTRSVACDNCQAKGCFPCPECSKS 99

The following BLAST results are available for this feature:

BLAST of Spo17911.1 vs. NCBI nr
BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
BLAST of Spo17911.1 vs. ExPASy Swiss-Prot
BLAST of Spo17911.1 vs. TAIR (Arabidopsis)

BLAST of Spo17911.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902190149\|gb\|KNA11543.1\|	1.4e-59	99.1	hypothetical protein SOVF_1339...	[more]
gi\|731349940\|ref\|XP_010686254.1\|	2.2e-49	81.7	PREDICTED: uncharacterized pro...	[more]
gi\|645248417\|ref\|XP_008230288.1\|	2.7e-31	61.6	PREDICTED: uncharacterized pro...	[more]
gi\|976925147\|gb\|KVI09060.1\|	3.5e-31	64.1	hypothetical protein Ccrd_0125...	[more]
gi\|595957289\|ref\|XP_007216705.1\|	4.6e-31	61.6	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo17911.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXV8_SPIOL	9.6e-60	99.1	Uncharacterized protein OS=Spi...	[more]
A0A0J8EN94_BETVU	1.5e-49	81.7	Uncharacterized protein OS=Bet...	[more]
A0A118K5H3_CYNCS	2.5e-31	64.1	Uncharacterized protein OS=Cyn...	[more]
M5WW56_PRUPE	3.2e-31	61.6	Uncharacterized protein OS=Pru...	[more]
W9R9J9_9ROSA	4.2e-31	62.7	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo17911.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17911.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G15802.1	6.0e-29	54.1	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37760	FAMILY NOT NAMED	coord: 2..115 score: 2.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070417	cellular response to cold
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0051604	protein maturation
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006027	glycosaminoglycan catabolic process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0015798	myo-inositol transport
biological_process	GO:0034053	modulation by symbiont of host defense-related programmed cell death
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0009846	pollen germination
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0000188	inactivation of MAPK activity
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0009657	plastid organization
biological_process	GO:0016310	phosphorylation
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006457	protein folding
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0019530	taurine metabolic process
biological_process	GO:0097503	sialylation
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0008152	metabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0010193	response to ozone
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006396	RNA processing
biological_process	GO:0015031	protein transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0042372	phylloquinone biosynthetic process
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0046339	diacylglycerol metabolic process
biological_process	GO:0071702	organic substance transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0009234	menaquinone biosynthetic process
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0006412	translation
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0048046	apoplast
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005768	endosome
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0090406	pollen tube
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009341	beta-galactosidase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0008076	voltage-gated potassium channel complex
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008373	sialyltransferase activity
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004000	adenosine deaminase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0005249	voltage-gated potassium channel activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0008935	1,4-dihydroxy-2-naphthoyl-CoA synthase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019905	syntaxin binding
molecular_function	GO:0004435	phosphatidylinositol phospholipase C activity
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0004853	uroporphyrinogen decarboxylase activity
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0009045	xylose isomerase activity
molecular_function	GO:0047800	cysteamine dioxygenase activity
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0033549	MAP kinase phosphatase activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0005366	myo-inositol:proton symporter activity
molecular_function	GO:0033858	N-acetylgalactosamine kinase activity
molecular_function	GO:0004335	galactokinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005057	obsolete signal transducer activity, downstream of receptor
molecular_function	GO:0043565	sequence-specific DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05352	0.75	Barchart \| Table
Spo19246	0.73	Barchart \| Table
Spo04373	0.72	Barchart \| Table
Spo03027	0.72	Barchart \| Table
Spo04104	0.72	Barchart \| Table
Spo23772	0.72	Barchart \| Table
Spo23286	0.72	Barchart \| Table
Spo22364	0.72	Barchart \| Table
Spo02579	0.72	Barchart \| Table
Spo18646	0.71	Barchart \| Table
Spo16421	0.71	Barchart \| Table
Spo24590	0.71	Barchart \| Table
Spo17803	0.70	Barchart \| Table
Spo09317	0.70	Barchart \| Table
Spo10192	0.70	Barchart \| Table
Spo10239	0.70	Barchart \| Table
Spo24544	0.70	Barchart \| Table
Spo02580	0.70	Barchart \| Table
Spo19850	0.70	Barchart \| Table
Spo00391	0.70	Barchart \| Table
Spo02068	0.70	Barchart \| Table
Spo05529	0.69	Barchart \| Table
Spo05640	0.69	Barchart \| Table
Spo01970	0.69	Barchart \| Table
Spo11193	0.69	Barchart \| Table
Spo25874	0.69	Barchart \| Table
Spo04546	0.69	Barchart \| Table
Spo28070	0.68	Barchart \| Table
Spo05124	0.68	Barchart \| Table
Spo05978	0.68	Barchart \| Table
Spo06141	0.68	Barchart \| Table
Spo06789	0.68	Barchart \| Table
Spo07623	0.68	Barchart \| Table
Spo11219	0.68	Barchart \| Table
Spo11520	0.68	Barchart \| Table
Spo11951	0.68	Barchart \| Table
Spo12217	0.68	Barchart \| Table
Spo20890	0.68	Barchart \| Table
Spo22506	0.68	Barchart \| Table
Spo22666	0.68	Barchart \| Table
Spo22940	0.68	Barchart \| Table
Spo24673	0.68	Barchart \| Table
Spo26355	0.68	Barchart \| Table
Spo27115	0.68	Barchart \| Table
Spo12107	0.67	Barchart \| Table
Spo01069	0.67	Barchart \| Table
Spo11911	0.67	Barchart \| Table
Spo10171	0.67	Barchart \| Table
Spo00283	0.67	Barchart \| Table
Spo18746	0.67	Barchart \| Table
Spo10581	0.67	Barchart \| Table
Spo13626	0.67	Barchart \| Table
Spo23889	0.67	Barchart \| Table
Spo22818	0.67	Barchart \| Table
Spo00361	0.67	Barchart \| Table
Spo16804	0.67	Barchart \| Table
Spo25917	0.67	Barchart \| Table
Spo03575	0.66	Barchart \| Table
Spo22543	0.66	Barchart \| Table
Spo16901	0.66	Barchart \| Table
Spo13491	0.66	Barchart \| Table
Spo14013	0.66	Barchart \| Table
Spo14096	0.66	Barchart \| Table
Spo08359	0.66	Barchart \| Table
Spo16584	0.66	Barchart \| Table
Spo16981	0.66	Barchart \| Table
Spo17169	0.66	Barchart \| Table
Spo17176	0.66	Barchart \| Table
Spo17338	0.66	Barchart \| Table
Spo17497	0.66	Barchart \| Table
Spo06829	0.66	Barchart \| Table
Spo04433	0.66	Barchart \| Table
Spo03002	0.66	Barchart \| Table
Spo23527	0.66	Barchart \| Table
Spo23588	0.66	Barchart \| Table
Spo02585	0.66	Barchart \| Table
Spo23932	0.66	Barchart \| Table
Spo10473	0.66	Barchart \| Table
Spo10861	0.66	Barchart \| Table
Spo10895	0.66	Barchart \| Table
Spo02479	0.66	Barchart \| Table
Spo27231	0.66	Barchart \| Table
Spo03505	0.65	Barchart \| Table
Spo03609	0.65	Barchart \| Table
Spo17778	0.65	Barchart \| Table
Spo14212	0.65	Barchart \| Table
Spo11015	0.65	Barchart \| Table
Spo17887	0.65	Barchart \| Table
Spo25330	0.65	Barchart \| Table
Spo24866	0.65	Barchart \| Table
Spo11509	0.65	Barchart \| Table