Spo17919 (gene)

Overview
NameSpo17919
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA08g18250D protein
LocationSpoScf_01843 : 43448 .. 48192 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAATCCAAAAACCCAAAAAACCACCACCAAGACCCTAAATTCTCCTCCCCACAAACACCGCCAACAAAAGCCTCAATTGAAGTTCACAACAACAATGGCAGCAGCTCAAATTCGGGTCAAAGGATCCATTTCCCGAACCCACCGGAGTCATTCAACCCGGATTCTGCAACTTTGAAGGATCAATGGAGGTTTGCTATACGGCAATACAGCAGATGGTATTCTCATGCTTGGGGCACTGCTATTCTTGCTGGTGGGGCCTTCTTTGCTCTTGGTTGGATCATCAAGGGTGGCAACCCTCTCCCTTCTAAAGATCCTGATCATCAAAAATCTGATCACAATCAAGGAAAAATATGATGATCATCAAGGGTTAGTTCTTAACCTTGTCCCAATTTCTTTTATTTTGATCTTGCACTTTTTCTTTCCTTAATTTCTTAATGGGGTCTGTTTTATAGAGGCGATGCATTTTTGGTCTGTAGTTTGGGTTGAATTGGAATTTGAAAGTTTTTATCTTGATTTTATTGTGACTTAGGGCTGTAAATATTACTTTGTAATGTATAATATAATGGGATTGTGGTTTAGTTGAGTGCGTTTGTTTATGAGTTTGATGATGTAGTTGAGTGTGTTTGATTATTATTTGGAGGGGGGAGGGGGAATTTTCGTCATCTTTTCCTTGAACTTGCTAATTTTCAGGTTAACCTGAAAATTTTGGCTTATTCTTTGCTTTTGATGGTCTCCTGTTTTAGTGTAAGTCTTGTGCAAGCTTTTCTTTGACTGTGGTTTAGGATATCTTTTGATCTTATACATGTGTTCTGCTGTTTATTTCTCTAATTGCACCATGGATCCCCAAGTTTTCGAAGGCTCCAAACTTCTTAATGTTCAAGGAATTAGATTGTAGTGTGATAAGCATATAGATTTATAGTATGTTGAGGATCGTTGTTCAGTTGTTTTCCGGTATTCTGTTATGTATTAACATCAACAGAAATTAAAGGAAGACGAAAGAGAGTTTATTGATAGAATGGAATTACAGAAAAAAGGAGGACAGTTATCAAGCTTTCAAGTGCCCTGATTCACTCCCAAGAGCTAAATAACACTTCAATAGTCTGGATGCCTTTCTCTTTGCCTACTCTCCTTTATGTAATGGGTTATCTGCCACAATTAACCAACTAATAATACAATAAATAAACTACCTCTTCCTATTACCCTAGTTCATTACATATAAGATACTACCTCCGTTTCAAAATGATCTTTACACTAGTCCGTTTCATAATGTTCTTCACATTGTGCTTTATTCTACTTTTGGACATGAAAATTTACTATTTTACCCCTCTTACCCCATAATAATTACTATTTTTCACTCACTTTCTCTTTCTTTAATCATTTTTTTTCTTCCACCCACCCACCTTTTTATACATCGATCTTACTTTATTTATATTTTATTATATTCTCTCGCCCTTTTACACACTCTCCTTCTTTTGTCTTAATATTTGTGCAAATAATAACTGTAAAGATCATTATGAAACGGAGGTAGTATATCTTATTCCCCCTATGAGCCATTTACCCCTTCTTCCATATTCCTGCCTGATAAGTGTGTGATTTGAGTTGCGACTGTTGTGAGTAGACATTAACATGAGATCTCAGATTAACTATTGGCTGCTGTGGTTAGCATCCTTTGATAAACTGCTCCCGAACTCTTTTTCCTAGCTGACAATATTGGAGGGGGGAGGGGGAATTTTCGTCAACTGCTTACAAGAAAGAAGTAAGCATCCTGTATAAACACCTTTTAGCTATAATAATGCCAACTAGCCGACTACAGTCATTACAGGATATAAAGATTATAAGAATGCAACTGTATAATACTGCACAACTAAATATTGATCAAAACATGTATTACGGACTGTCAAGTAACCAGCATGGCTGATGTAAGTGAACCAAATGGTGTTTTCAGGGTAGGTAGAGATTCTTAATATTTTTTATAAAAAATACCAAATTTAGTTAGTGATCAGATAGGAGCTTGGATATTGTGAGGTGTTTGTGTATCTATCTCTTGGATTGGCTACGCTCTTTATACTGCAATCCTTAATTCCTTAGTCAGAAGAAATGGTACTGTTACTTATGATTCTATTTGTGACTTGTGAGGCCCATGAGGCTGCTGCTTTCTTATTTCAAGAGAAATTCCGAATTAATCTCATTCATTAAGAATTTTTCCAAGTCAAATGGCAGTTTTGTAACTATTCTATTACGAAACGCCATTAAATATGGGCCTCACGTGCGGTCAAATGCCATTAAATGCAGCCTCACGTACAGTCGATGGTGCATTTTCGTAACATATTAACAACTATGTAGTATACAGTCAACATCTATTAATACACAATCAATAACTATAAATATACAGTGAATTACTTCCAAATGAACAACTTTTACATTTTAGTAATACATCAGCAGCCATAGAATATACCTTCAACAACTAGTATATACAATAAACACCTATTACTATAGACTTATAGAGTCAAACAACTAGGAATAGACCACCTATAATTTTCTAGCCAAAATTTTACAGTATGTCATTTGATTGGAAAGTTTTCCTAATCAGAGAGATTAACTCGAGCGACCTCCTTATTTCATCTCCATGAACAATGTTGGAAAGTTCTCCCTGCTTACATCATACCAAATTTCCGTTTGGTCTTCTTTGTTTCCTGCTATTTTTCAGACTTCAGAGTATATCTTAGATTTTGATGTGGCCTACTTTTTATAAAATTCTTTCTGCTTGATTCCCATCTAAAGCTACATAGTTCTGACTTCTTAGCTCACAATCTCATTTCGGTTGTTTCAGATAACTAAAGCTCTATTATGTGTCGGTTGTTCTATAACCTTGTTATCTCTAAGTGATGTGGAAGTGGGTGTGAGGATTTGGTTTTGAAGCTCAATTTTTTTTGGGGAAATGTCTCACCCTTTCTCAAGATCAAACATAGAACTGTCAAAAAGAACACCATGCACAGATTCACTTACTTGTTCTGTATGTTTACTTTATAAGTATTTTTCAACATGGAACAAGGATGAGGGTGCTGGATTAGCAATTTTACGTTCCAATTCAAGTATGTGTTGGCATATTAGATTTTTTGACATATCATATCTTGTGTCCTCCCATTTACTGGACATGATAGAATGCAGTGGTAAGGAAAAGGATTGCCAAATGTGCGAAGGATACTCTCCTTCACTCATGGCTTGAGTTATATGGTTTTCATGGCATATGGTAACTGGCCTTCTAGATAATACATATAAAGTTTGTGAGAATCATGGAAGAGGCTGGTGGTGTAATGTAAAAACAGCATCTGTAAAGGGGTGCCATTTTAAAATTTGGAAGATGCTATTGGTATGAATTTGTGCATGGTCTTCAAAGATGATTACTGCTTGGTAATTTACAATATGGTTCCGATAGAAGAGGTTTTTAAACAGTGCAGAAGTATTCCGCATCAGTAACTTTTTCCTCTGTAAAAGGTAGAGCAAAAGAAGTGGGCATGTGGGAGTGGATCTCGACTTCAAAGAGTAAGTAGAGAAAAAAATGGGTTGAAGTGAAATGTACTTTGGGTTTGGAGTTGGGATATCGTGTTTTGGTAAATGTTAGGTTTAAGCTGAGACGTAGGGAGTATTCTGGGTAGCTGTCAGGCCTTATAAAAGGGGCAGATGCTCTGTTTAATATTGGTTGGCAATTTGGTGTGTGTTTGAGATGAACGTGGCACATATGTAAAGGGTTTTATTCTTAAAGCATGTGTTTCTACTGAAATCAGAGGACCTGATCCCTACTGCAGCAGAACGTGCTATTTGGCTTTTCTATCCGTACTGCTGAGACCAAACACTAAATCTTGCCTTTGGTTTGATTGAATTCTCTCAATTAATATGTCATTCATTATCATTATCATTACCCCATTGCTTCAAAGAGGCTCCCGCAAGAAGCGGGGCAAGGGGGGTCGGGTGTACGCAACCTTACCCCTGCAATTGCATAGAGGTTGTTTCCAATTGACCCAAAAGTGATAACGGGACGACAACGGGACGACCATCTCTTACTTCGTGGAAAGGAAGTGAAGAGGTTTTAAGAGCCATTTTGATTTAATCCATTACATCCACAGCCAAAAGAACAAATGAATCTTTGGCTCCATCGGAGTGAACAAATGAATCTCAATTAATATGTGATGTTTTTTTTATGCCTCGTTTTTCTTCAAGTATATGCACTTTCTCTGTTCCGGATGAATATATGATATTGTTCTATACAGGCAGAATTTAGAAATCTCATTGATATTGCCTATAATACAAAGCGGATAAAGAATCGTTTTTAAAGATCGACTGAGCTTATATTTTAGGTTACTTATTGCCCCGAGTCTCAGGCCTGTGGATCTATCTTGCTTTTTGTGAATTTTCATTGTCTGATATTAGTAATAATAGTCAGGCTTTGGCTAAAATATGAGTATACCGTAATTGCAGATGTAGTCACAGTATCGGATGAAAGGTTGATGAGAAGGGTGCAGCTCGCCCTACCGAGGTGCATTATATACAAGGTGTCAAATTGGAGCTGACCTTTAGATCATTGGCTCTGTGGATGTGAATGACTGTTTTCAAACTCTCTTTTGCTGAACTCTGAAAACAGATCTATGGAAAAGATTTAGGATGTGCCTCACTCACTACTAACGTGGTATGTGATTGTAAATAAATCTCTCTTTATGCAGTCTGCAGAACCGAACGAGTAG

mRNA sequence

ATGGCAGAATCCAAAAACCCAAAAAACCACCACCAAGACCCTAAATTCTCCTCCCCACAAACACCGCCAACAAAAGCCTCAATTGAAGTTCACAACAACAATGGCAGCAGCTCAAATTCGGGTCAAAGGATCCATTTCCCGAACCCACCGGAGTCATTCAACCCGGATTCTGCAACTTTGAAGGATCAATGGAGGTTTGCTATACGGCAATACAGCAGATGGTATTCTCATGCTTGGGGCACTGCTATTCTTGCTGGTGGGGCCTTCTTTGCTCTTGATGTAGTCACAGTATCGGATGAAAGGTTGATGAGAAGGGTGCAGCTCGCCCTACCGAGGTGCATTATATACAAGTCTGCAGAACCGAACGAGTAG

Coding sequence (CDS)

ATGGCAGAATCCAAAAACCCAAAAAACCACCACCAAGACCCTAAATTCTCCTCCCCACAAACACCGCCAACAAAAGCCTCAATTGAAGTTCACAACAACAATGGCAGCAGCTCAAATTCGGGTCAAAGGATCCATTTCCCGAACCCACCGGAGTCATTCAACCCGGATTCTGCAACTTTGAAGGATCAATGGAGGTTTGCTATACGGCAATACAGCAGATGGTATTCTCATGCTTGGGGCACTGCTATTCTTGCTGGTGGGGCCTTCTTTGCTCTTGATGTAGTCACAGTATCGGATGAAAGGTTGATGAGAAGGGTGCAGCTCGCCCTACCGAGGTGCATTATATACAAGTCTGCAGAACCGAACGAGTAG

Protein sequence

MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATLKDQWRFAIRQYSRWYSHAWGTAILAGGAFFALDVVTVSDERLMRRVQLALPRCIIYKSAEPNE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17919.1Spo17919.1mRNA


Homology
[Close]
BLAST of Spo17919.1 vs. NCBI nr
Match: gi|902168969|gb|KNA07583.1| (hypothetical protein SOVF_170250 [Spinacia oleracea])

HSP 1 Score: 193.4 bits (490), Expect = 2.400e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
          MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL
Sbjct: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60

Query: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 93
          KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL
Sbjct: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 92
[Close]
BLAST of Spo17919.1 vs. NCBI nr
Match: gi|731350176|ref|XP_010686372.1| (PREDICTED: uncharacterized protein LOC104900604 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 131.3 bits (329), Expect = 1.100e-27
Identity = 70/109 (64.22%), Postives = 80/109 (73.39%), Query Frame = 1 

		  

Query: 1   MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
           MAES NPK  +QD K + P  PPTK SI   N + + SNSGQ+I F NPPE+ NPD+ATL
Sbjct: 1   MAESHNPKTQNQDHKPTIPP-PPTKPSI---NGSSNGSNSGQKIRFQNPPETINPDAATL 60

Query: 61  KDQWRFAIRQYSRWYSHAWGTAILAGGAFFALDVVTVSDERLMRRVQLA 110
           KDQWRFAIRQYSRWYSHAWGTAI AGGAFFAL  +   D + M  + LA
Sbjct: 61  KDQWRFAIRQYSRWYSHAWGTAIFAGGAFFALGWIIKGDGKAMADLVLA 105
[Close]
BLAST of Spo17919.1 vs. NCBI nr
Match: gi|731350178|ref|XP_010686373.1| (PREDICTED: uncharacterized protein LOC104900604 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 129.0 bits (323), Expect = 5.600e-27
Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = 1 

		  

Query: 1   MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
           MAES NPK  +QD K + P  PPTK SI   N + + SNSGQ+I F NPPE+ NPD+ATL
Sbjct: 1   MAESHNPKTQNQDHKPTIPP-PPTKPSI---NGSSNGSNSGQKIRFQNPPETINPDAATL 60

Query: 61  KDQWRFAIRQYSRWYSHAWGTAILAGGAFFALDVVTVSDERLMRRVQLA 110
           KDQWRFAIRQYSRWYSHAWGTAI AGGAFFAL  + + D + M  + LA
Sbjct: 61  KDQWRFAIRQYSRWYSHAWGTAIFAGGAFFALGWI-IKDGKAMADLVLA 104
[Close]
BLAST of Spo17919.1 vs. NCBI nr
Match: gi|731350180|ref|XP_010686374.1| (PREDICTED: uncharacterized protein LOC104900604 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.7 bits (317), Expect = 2.800e-26
Identity = 66/92 (71.74%), Postives = 73/92 (79.35%), Query Frame = 1 

		  

Query: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
          MAES NPK  +QD K + P  PPTK SI   N + + SNSGQ+I F NPPE+ NPD+ATL
Sbjct: 1  MAESHNPKTQNQDHKPTIPP-PPTKPSI---NGSSNGSNSGQKIRFQNPPETINPDAATL 60

Query: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 93
          KDQWRFAIRQYSRWYSHAWGTAI AGGAFFAL
Sbjct: 61 KDQWRFAIRQYSRWYSHAWGTAIFAGGAFFAL 88
[Close]
BLAST of Spo17919.1 vs. NCBI nr
Match: gi|657983203|ref|XP_008383668.1| (PREDICTED: uncharacterized protein LOC103446356 [Malus domestica])

HSP 1 Score: 104.8 bits (260), Expect = 1.100e-19
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 1 

		  

Query: 13 DPKFSSPQT-PPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATLKDQWRFAIRQY 72
          +PK  +PQ  PP++ +   H +  SSS SGQ++ FPNPP+   PD+ATL++QW+FAIRQY
Sbjct: 3  EPKPDTPQNVPPSEINHNAHTSKPSSSFSGQKVRFPNPPDPEIPDAATLREQWKFAIRQY 62

Query: 73 SRWYSHAWGTAILAGGAFFAL 93
          S+WYSHAWGTAILAG +FFAL
Sbjct: 63 SKWYSHAWGTAILAGASFFAL 83
[Close]
BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170250 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.700e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
          MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL
Sbjct: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60

Query: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 93
          KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL
Sbjct: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 92
[Close]
BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTW7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182280 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.900e-27
Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = 1 

		  

Query: 1   MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
           MAES NPK  +QD K + P  PPTK SI   N + + SNSGQ+I F NPPE+ NPD+ATL
Sbjct: 1   MAESHNPKTQNQDHKPTIPP-PPTKPSI---NGSSNGSNSGQKIRFQNPPETINPDAATL 60

Query: 61  KDQWRFAIRQYSRWYSHAWGTAILAGGAFFALDVVTVSDERLMRRVQLA 110
           KDQWRFAIRQYSRWYSHAWGTAI AGGAFFAL  + + D + M  + LA
Sbjct: 61  KDQWRFAIRQYSRWYSHAWGTAIFAGGAFFALGWI-IKDGKAMADLVLA 104
[Close]
BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182280 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.900e-26
Identity = 66/92 (71.74%), Postives = 73/92 (79.35%), Query Frame = 1 

		  

Query: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
          MAES NPK  +QD K + P  PPTK SI   N + + SNSGQ+I F NPPE+ NPD+ATL
Sbjct: 1  MAESHNPKTQNQDHKPTIPP-PPTKPSI---NGSSNGSNSGQKIRFQNPPETINPDAATL 60

Query: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 93
          KDQWRFAIRQYSRWYSHAWGTAI AGGAFFAL
Sbjct: 61 KDQWRFAIRQYSRWYSHAWGTAIFAGGAFFAL 88
[Close]
BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Match: B9H2I9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s05060g PE=4 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.000e-19
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 1 

		  

Query: 13  DPKFSSPQTPPTKASIEVHNNN------GSSSNSGQRIHFPNPPESFNPDSATLKDQWRF 72
           DP+  +PQ  P+ ++    N N      G+ + SGQ++HF NPPE+ NPD ATL++QWRF
Sbjct: 79  DPQNPNPQNLPSSSASSSSNKNPTEIKPGNGNYSGQKVHFSNPPETTNPDPATLREQWRF 138

Query: 73  AIRQYSRWYSHAWGTAILAGGAFFAL 93
           AIRQYS+WYSHAWGTAILAG +FFAL
Sbjct: 139 AIRQYSKWYSHAWGTAILAGVSFFAL 164
[Close]
BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Match: A0A0D2N5X5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G035900 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.300e-19
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 1 

		  

Query: 1  MAESKNPKNHHQDPKFSSPQTPPTKASIEVHNNNGSSSNSGQRIHFPNPPESFNPDSATL 60
          M+E++ P++H   P      + P K+  E+ +N  S  ++ QR+ FPNPP+  NPD +TL
Sbjct: 1  MSENQKPQSHQNLP------SSPNKSIPEIESNAASDFSAHQRVRFPNPPDLTNPDPSTL 60

Query: 61 KDQWRFAIRQYSRWYSHAWGTAILAGGAFFAL 93
          +DQWR+AIRQYSRWYSHAWGTAILAG +FFAL
Sbjct: 61 RDQWRYAIRQYSRWYSHAWGTAILAGVSFFAL 86
[Close]
BLAST of Spo17919.1 vs. TAIR (Arabidopsis)
Match: AT1G28540.1 (unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 9.200e-20
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 1 

		  

Query: 25 KASIEVHNNNGSSS--------NSGQRIHFPNPPESFNPDSATLKDQWRFAIRQYSRWYS 84
          K+ I  +NNN SSS         SG    + NPPES NPD ATL++QW+FAIRQYS+WYS
Sbjct: 4  KSQIPDNNNNTSSSAKKPTPEIGSGSGKRYYNPPESVNPDQATLREQWKFAIRQYSKWYS 63

Query: 85 HAWGTAILAGGAFFAL 93
          HAWGTAILAGG FF L
Sbjct: 64 HAWGTAILAGGFFFGL 79
The following BLAST results are available for this feature:
BLAST of Spo17919.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902168969|gb|KNA07583.1|2.4e-46100.hypothetical protein SOVF_1702... [more]
gi|731350176|ref|XP_010686372.1|1.1e-2764.2PREDICTED: uncharacterized pro... [more]
gi|731350178|ref|XP_010686373.1|5.6e-2764.2PREDICTED: uncharacterized pro... [more]
gi|731350180|ref|XP_010686374.1|2.8e-2671.7PREDICTED: uncharacterized pro... [more]
gi|657983203|ref|XP_008383668.1|1.1e-1960.4PREDICTED: uncharacterized pro... [more]
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BLAST of Spo17919.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QLK5_SPIOL1.7e-46100.Uncharacterized protein OS=Spi... [more]
A0A0J8BTW7_BETVU3.9e-2764.2Uncharacterized protein OS=Bet... [more]
A0A0J8ENL9_BETVU1.9e-2671.7Uncharacterized protein OS=Bet... [more]
B9H2I9_POPTR1.0e-1958.1Uncharacterized protein OS=Pop... [more]
A0A0D2N5X5_GOSRA1.3e-1954.3Uncharacterized protein OS=Gos... [more]
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BLAST of Spo17919.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17919.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G28540.19.2e-2061.8unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37186FAMILY NOT NAMEDcoord: 11..92
score: 8.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0010207 photosystem II assembly
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo180000.67Barchart | Table
Spo002140.66Barchart | Table