Spo17927 (gene)

Overview
NameSpo17927
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP synthase subunit alpha, chloroplastic (3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
Locationchr2 : 19183337 .. 19183960 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCATTCGAGCAGATGAAATTAGCAAAATTATCCGTGAACGTATTGAAGGATATAATCGAGAAGTAAAGGTTGTAAATACCGGTACAGTGCTTCAAGTGGGTGACGGCATTGCTCGTATTCACGGTCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAGGGAACAATAGGTATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGGTTGATGATACAAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCCGTGAGTGAGGCTTATTTAGGGCGTGTTATAAATGCCCTACCTAAACCTATTGATGATAGGGGTGAAATTACAGCTTCTGAATCTCGGTTAATTGAATCTCCCGCTCCTGGTATTATTTCCAGACGTTCCGTGTATGAGCCTCTTCAAACCGGACTTATTGCTATTGATGCAATGACCCCTGTAGGGCGTGGTCAGCGAGAATTAATTATCGGGGACAGACAAACTGGTAAAACAGCAGTAGCCACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGACAAAAAGCATCTTCTGTGGCGCAG

mRNA sequence

ATGGCAACCATTCGAGCAGATGAAATTAGCAAAATTATCCGTGAACGTATTGAAGGATATAATCGAGAAGTAAAGGTTGTAAATACCGGTACAGTGCTTCAAGTGGGTGACGGCATTGCTCGTATTCACGGTCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAGGGAACAATAGGTATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGGTTGATGATACAAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCCGTGAGTGAGGCTTATTTAGGGCGTGTTATAAATGCCCTACCTAAACCTATTGATGATAGGGGTGAAATTACAGCTTCTGAATCTCGGTTAATTGAATCTCCCGCTCCTGGTATTATTTCCAGACGTTCCGTGTATGAGCCTCTTCAAACCGGACTTATTGCTATTGATGCAATGACCCCTGTAGGGCGTGGTCAGCGAGAATTAATTATCGGGGACAGACAAACTGGTAAAACAGCAGTAGCCACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGACAAAAAGCATCTTCTGTGGCGCAG

Coding sequence (CDS)

ATGGCAACCATTCGAGCAGATGAAATTAGCAAAATTATCCGTGAACGTATTGAAGGATATAATCGAGAAGTAAAGGTTGTAAATACCGGTACAGTGCTTCAAGTGGGTGACGGCATTGCTCGTATTCACGGTCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAGGGAACAATAGGTATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGGTTGATGATACAAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCCGTGAGTGAGGCTTATTTAGGGCGTGTTATAAATGCCCTACCTAAACCTATTGATGATAGGGGTGAAATTACAGCTTCTGAATCTCGGTTAATTGAATCTCCCGCTCCTGGTATTATTTCCAGACGTTCCGTGTATGAGCCTCTTCAAACCGGACTTATTGCTATTGATGCAATGACCCCTGTAGGGCGTGGTCAGCGAGAATTAATTATCGGGGACAGACAAACTGGTAAAACAGCAGTAGCCACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGACAAAAAGCATCTTCTGTGGCGCAG

Protein sequence

MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRGEITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17927.1Spo17927.1mRNA


Homology
BLAST of Spo17927.1 vs. NCBI nr
Match: gi|126022791|ref|NP_054917.2| (ATP synthase CF1 alpha subunit [Spinacia oleracea])

HSP 1 Score: 387.5 bits (994), Expect = 1.500e-104
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EITASESRLIESPAPGI+SRRSVYEPLQTGLIAIDAM PVGRGQRELIIGDRQTGKTAVA
Sbjct: 121 EITASESRLIESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. NCBI nr
Match: gi|937631212|gb|ALI89186.1| (AtpA, partial (chloroplast) [Phytocrene racemosa])

HSP 1 Score: 379.4 bits (973), Expect = 4.000e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. NCBI nr
Match: gi|916437603|gb|AKZ21507.1| (ATP synthase CF1 alpha subunit (plastid) [Ellisia nyctelea])

HSP 1 Score: 379.4 bits (973), Expect = 4.000e-102
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M+TIRADEIS IIRERIE YNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MSTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI++SESRLIESPAPGIISRRSVYEPLQTGLIAIDAM P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. NCBI nr
Match: gi|937631196|gb|ALI89178.1| (AtpA, partial (chloroplast) [Miquelia caudata])

HSP 1 Score: 379.4 bits (973), Expect = 4.000e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. NCBI nr
Match: gi|937631226|gb|ALI89193.1| (AtpA, partial (chloroplast) [Pyrenacantha lobata])

HSP 1 Score: 379.4 bits (973), Expect = 4.000e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Match: A0A0S0ZFI8_9ASTE (ATP synthase subunit alpha, chloroplastic (Fragment) OS=Phytocrene racemosa GN=atpA PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.800e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Match: A0A0S0ZFJ8_9ASTE (ATP synthase subunit alpha, chloroplastic (Fragment) OS=Pyrenacantha acuminata GN=atpA PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.800e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Match: A0A0S0ZFJ4_9ASTE (ATP synthase subunit alpha, chloroplastic (Fragment) OS=Pyrenacantha gabonica GN=atpA PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.800e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Match: A0A0S0ZFJ7_9ASTE (ATP synthase subunit alpha, chloroplastic (Fragment) OS=Pyrenacantha rakotazafyi GN=atpA PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.800e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Match: A0A0S0ZFH3_9ASTE (AtpA (Fragment) OS=Miquelia caudata GN=atpA PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.800e-102
Identity = 198/208 (95.19%), Postives = 203/208 (97.60%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRV+NAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Match: ATPA_SPIOL (ATP synthase subunit alpha, chloroplastic OS=Spinacia oleracea GN=atpA PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 9.200e-107
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EITASESRLIESPAPGI+SRRSVYEPLQTGLIAIDAM PVGRGQRELIIGDRQTGKTAVA
Sbjct: 121 EITASESRLIESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Match: ATPA_COFAR (ATP synthase subunit alpha, chloroplastic OS=Coffea arabica GN=atpA PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.300e-104
Identity = 198/208 (95.19%), Postives = 202/208 (97.12%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M TIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Match: ATPA_VITVI (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera GN=atpA PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.300e-104
Identity = 198/208 (95.19%), Postives = 202/208 (97.12%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M TIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Match: ATPA_GOSHI (ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum GN=atpA PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 9.500e-104
Identity = 197/208 (94.71%), Postives = 202/208 (97.12%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M TIRADEIS IIRERIE YNREVK+VNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Match: ATPA_PLAOC (ATP synthase subunit alpha, chloroplastic OS=Platanus occidentalis GN=atpA PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.600e-103
Identity = 197/208 (94.71%), Postives = 202/208 (97.12%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M T+RADEIS IIRERIE YNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
Sbjct: 1   MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINAL KPID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           EI+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQ+GQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQKGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 369.4 bits (947), Expect = 1.500e-102
Identity = 193/208 (92.79%), Postives = 200/208 (96.15%), Query Frame = 1

		  

Query: 1   MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60
           M TIRADEIS IIRERIE YNREV +VNTGTVLQVGDGIARI+GLDEVMAGELVEFEEGT
Sbjct: 1   MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRG 120
           IGIALNLESNNVGVVLMGDGLMIQEGSSVKATG+IAQIPVSEAYLGRVINAL  PID RG
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRG 120

Query: 121 EITASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVA 180
           +I+ASESRLIESPAPGIISRRSVYEPLQTGLIAID+M P+GRGQRELIIGDRQTGKTAVA
Sbjct: 121 KISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 209
           TDTILNQQGQNVICVYVAIGQKASSVAQ
Sbjct: 181 TDTILNQQGQNVICVYVAIGQKASSVAQ 208

BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 214.2 bits (544), Expect = 7.900e-56
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 1

		  

Query: 5   RADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIA 64
           RA E++ +   RI  +    +V   G V+ VGDGIA+++GL+E+ AGE+V F  G  G+A
Sbjct: 276 RAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMA 335

Query: 65  LNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRGEITA 124
           LNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++A+  PID +G ++ 
Sbjct: 336 LNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSD 395

Query: 125 SESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVATDTI 184
            E R +E  APGI+ R+SV+EP+QTGL A+D++ P+GRGQREL+IGDRQTGKT +A DTI
Sbjct: 396 HEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTI 455

Query: 185 LNQ---------QGQNVICVYVAIGQKASSVAQ 209
           LNQ         + + + CVYVAIGQK S+V Q
Sbjct: 456 LNQKQINSRATSESETMYCVYVAIGQKRSTVGQ 488

BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 211.5 bits (537), Expect = 5.100e-55
Identity = 106/213 (49.77%), Postives = 146/213 (68.54%), Query Frame = 1

		  

Query: 5   RADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIA 64
           RA E++ +   RI  +    +V   G V+ VGDGIA+++GL+E+ AGE+V F  G  G+A
Sbjct: 6   RAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMA 65

Query: 65  LNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRGEITA 124
           LNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A LGRV++A+  PID +G ++ 
Sbjct: 66  LNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSD 125

Query: 125 SESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVATDTI 184
            E R +E  APGI+ R+SV+EP+QTGL A+D++ P+GRGQREL+IG RQTGKT +A DTI
Sbjct: 126 HEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAIDTI 185

Query: 185 LNQ---------QGQNVICVYVAIGQKASSVAQ 209
           LNQ         + + + CVYVAIGQK S+V Q
Sbjct: 186 LNQKQINSRATSESETMYCVYVAIGQKRSTVGQ 218

BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Match: AT5G08670.1 (ATP synthase alpha/beta family protein)

HSP 1 Score: 68.2 bits (165), Expect = 7.000e-12
Identity = 42/141 (29.79%), Postives = 67/141 (47.52%), Query Frame = 1

		  

Query: 63  IALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRGEI 122
           ++ +L  N V  + M     +  G  V  TG    +PV  A LGR++N L +PID+RGEI
Sbjct: 124 VSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEI 183

Query: 123 TASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVATD 182
                  I   AP ++   +  E L TG+  +D + P  RG +  + G    GKT +  +
Sbjct: 184 KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIME 243

Query: 183 TILN-QQGQNVICVYVAIGQK 203
            I N  +      V+  +G++
Sbjct: 244 LINNVAKAHGGFSVFAGVGER 264

BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Match: AT5G08680.1 (ATP synthase alpha/beta family protein)

HSP 1 Score: 68.2 bits (165), Expect = 7.000e-12
Identity = 42/141 (29.79%), Postives = 67/141 (47.52%), Query Frame = 1

		  

Query: 63  IALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALPKPIDDRGEI 122
           ++ +L  N V  + M     +  G  V  TG    +PV  A LGR++N L +PID+RGEI
Sbjct: 127 VSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEI 186

Query: 123 TASESRLIESPAPGIISRRSVYEPLQTGLIAIDAMTPVGRGQRELIIGDRQTGKTAVATD 182
                  I   AP ++   +  E L TG+  +D + P  RG +  + G    GKT +  +
Sbjct: 187 KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIME 246

Query: 183 TILN-QQGQNVICVYVAIGQK 203
            I N  +      V+  +G++
Sbjct: 247 LINNVAKAHGGFSVFAGVGER 267

The following BLAST results are available for this feature:
BLAST of Spo17927.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|126022791|ref|NP_054917.2|1.5e-10498.0ATP synthase CF1 alpha subunit... [more]
gi|937631212|gb|ALI89186.1|4.0e-10295.1AtpA, partial (chloroplast) [P... [more]
gi|916437603|gb|AKZ21507.1|4.0e-10295.6ATP synthase CF1 alpha subunit... [more]
gi|937631196|gb|ALI89178.1|4.0e-10295.1AtpA, partial (chloroplast) [M... [more]
gi|937631226|gb|ALI89193.1|4.0e-10295.1AtpA, partial (chloroplast) [P... [more]
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BLAST of Spo17927.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0S0ZFI8_9ASTE2.8e-10295.1ATP synthase subunit alpha, ch... [more]
A0A0S0ZFJ8_9ASTE2.8e-10295.1ATP synthase subunit alpha, ch... [more]
A0A0S0ZFJ4_9ASTE2.8e-10295.1ATP synthase subunit alpha, ch... [more]
A0A0S0ZFJ7_9ASTE2.8e-10295.1ATP synthase subunit alpha, ch... [more]
A0A0S0ZFH3_9ASTE2.8e-10295.1AtpA (Fragment) OS=Miquelia ca... [more]
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BLAST of Spo17927.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATPA_SPIOL9.2e-10798.0ATP synthase subunit alpha, ch... [more]
ATPA_COFAR4.3e-10495.1ATP synthase subunit alpha, ch... [more]
ATPA_VITVI4.3e-10495.1ATP synthase subunit alpha, ch... [more]
ATPA_GOSHI9.5e-10494.7ATP synthase subunit alpha, ch... [more]
ATPA_PLAOC1.6e-10394.7ATP synthase subunit alpha, ch... [more]
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BLAST of Spo17927.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
ATCG00120.11.5e-10292.7ATP synthase subunit alpha[more]
AT2G07698.17.9e-5650.2ATPase, F1 complex, alpha subu... [more]
ATMG01190.15.1e-5549.7ATP synthase subunit 1[more]
AT5G08670.17.0e-1229.7ATP synthase alpha/beta family... [more]
AT5G08680.17.0e-1229.7ATP synthase alpha/beta family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 150..207
score: 4.4
IPR004100ATPase, F1 complex alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 28..93
score: 9.8
IPR004100ATPase, F1 complex alpha/beta subunit, N-terminal domainunknownSSF50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 11..95
score: 1.28
IPR023366ATP synthase subunit alpha-like domainGENE3D2.40.30.20coord: 3..94
score: 4.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 96..208
score: 2.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 97..207
score: 3.54
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..208
score: 7.1E
NoneNo IPR availablePANTHERPTHR15184:SF42ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 1..208
score: 7.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0046034 ATP metabolic process
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005886 plasma membrane
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0032549 ribonucleoside binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0005524 ATP binding
molecular_function GO:0016168 chlorophyll binding
RNA-Seq Expression