Spo17946 (gene)

Overview
NameSpo17946
Typegene
OrganismSpinacia oleracea (Spinach)
Description(Methylenetetrahydrofolate dehydrogenase, putative) (3.5.4.9)
Locationchr4 : 38325046 .. 38330405 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGCAGAGACCCCCTCTTCGAGCCTTGCACGCCGAAGGTGATTGATTCAAATACTAATTGCTTCTTTTAAATGCCGAACTTGTATTTTGCTGACTAGTCTCCCTTATGGAGATTTGTTTTTGACAGGGATGTCTTGAGCTTCTGTCTCGAAGTGGTATTAGTGTAAAAGGCAAAATGGCAGTTGTTGTAGGTCGTAGTAATATTGTTGGATTGCCAGTATCACTCCTCCTCTTGAAAGAATATGCAGCAGTTAGTATTGTCTACTCTCGTACAACTGATCCTGAAATCATTATTCGTCAAGCTGACATCGTCATTGCTATAGCAGGACAAGCCATGATGGTATTTAATGATCTATTTCCCCCCTTCTGTTGCCTTCTTCTTTTAAACTGTGATATGTAGTCTAGAACTTGCCACTTTCCCCCCTTTTGATTGCCTTTAACTGTGATCATCTCTTTATACTTGATTTTTACATAACAGATTAGATAATTTCTCACTGGTTAATAAACGACTGTTACTGATTAAAACTGATCCTTTACTGATTCTAAATGGGTTTTACTGATCCTTTACTGCCAACCAATTGTCGGTTATACTATTGTTTGTTAGTGAAAACTGAGTATTATTGTTCAAGTAGAACTGTAGAAGAGAACATAGCCTAACAAAGTGAATGTGATTCCAGATGATCCATTACAGATGAATGAGATGTTACTGTGTCAGGTTCTTCTCAGGAATAGTCGTGTGGGACTGCTTTCCAGGACAGAGAGAGAACTAGCGGTCTCCCAGTTCCTCAAGAAGATCAACCAATGGAGGTTTTGGCTGGGAAACACTTGAGACAGCATCTGCAACACCCTAACATGAAGGGGAATTCAGGCCGGAGCAGTCTAGATTATTCTGCAATTGGTGATGGGAGTTTCTCAACTTCTGAAAAATCGGGGGAGAAAAAGAGAGCCAAGGCAGAAAAAACAATTACATTGGAAGTTCTTTGTCAGCATTTTGCAGGAAGCCTCAAGGATGTTGCGAAGAGCATTGGTGGTAAGTTGCTATTTTTTGAAAACATTTGGTTGAAAACAATCAAATATACAAATTTGATAATCAAGTAATAGTGAGGTCTAAGGATGGACTTTGAGGGTACGTGATCTTTGTAATATGCTTGCTTGGGTGAAAACTTAGTAACTCTCCTGCCTACACAGATGAAGTAAGATTCTGAAGTCATATAAGTGTGTAGGAGAAATACTGGAAATATTCTAAATACTACGTAATTTACAAGTAAAACACAGCAAAAGAAGAAAATCAGCTAAAACGACAGAATCACAAAACTATGAGTTATACTTGAACAGTCTAATCACCCATTGAAAGTTCTCTTTCATTCCCTCTCTATCTGAGAGTATTGTGTACAGTCATAGTATTAAGTAACAAGAGTTTAGGAAAATGTTTCTGCTAATTCTACATTCACCGTCCCAAATGTTTAATATTATTAGTTTAAGATTTCTCTTATTCATAGATGACTATATCAATCCTCATTCTCATCTACTTTGGTCAATTTATGCACATTTAAGGCTCGTTCGATACTTACATGTCATATTTTGAAAAAAAAGCAGTTTTCGCTCCAACTCTTAACTCATGAACCAAAATAGGAATTATTAACCTTTTACATGTTTAATATACTTAGTATTAGGTTTCCAATCCTTATTCTCATCTACTTTGGTCAATTTATGCACATTTAAGGCCCTTTCGATCCTTGCATGTCATATTTTGACTATACAAGTTGTTTTCGCTCCCAACTCTCAACTAATGAACCAAAATAGGAATCATTAACCCTTTACATGTTTAAAATGCCATTTTGGGCCAAATATGACCTATATCGTCCCAAATGAGCCTTCTGTGTGCATAAAGAACTTGAAATGAATCTTAGTAACCTCTAACTAAGCATATAAAACATAAAAAAGATTTGGAAAGTGTCCTTAGGTTCATTTGTTGGTAGTTGGGATCGAAAATGCCAATTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAATGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATAAATCATGAAAAAGGTTTAGAATTTGGACTTAGGTTTGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCTTAGGCGTGCATAACGAACTTGAAATGAGTTTAATAAACATATAACTAATCATATGAATCATTAAAAAGGTTTGGCATTTGAATATAAGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCAATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAATCATATAAATAATCATATAAATCATGAAAAAGGTTCAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAATGTTTAGAATATGGAAATAGGTTTGTTTGTTGGTAGTTGGTATCGAAAATGCCATTTTTGGCCATTAATGACCTATATCGACCCAAATGACCCATAGGCGTTCATAAAGAAGATGAAATGAGTCTTATAGTCATATAACTAATCATATGAATCATGAAAAATGTTCAGAATATGGAAATAGTTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCTTAGGCGTGCATAACGAACTTGAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAAGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAATGTTTAGAATATGGAAATAGGTTTGTTTGTTGGTAGTTGGTATCGAAAATGCCATTTTTGGCCATTAATGACCTATATCGACCCAAATGACCCATAGGCGTTCATAAAGAAGATGAAATGAGTCTTATAGTCATATAACTAATCATATGAATCATGAAAAATGTTCAGAATATGGAAATAGTTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCTTAGGCGTGCATAACGAACTTGAAATGAGTTTCATAAACATATAACTAATCATATGAATAATTAAAAAGGTTTGGAATTTGAATATAATTTCGTTTGTTGGTAGTTGGGATCGAAAATTCCATCTTTTTGCCATAAATGACCTATATCGACCCAAATGACCCTTAGGCGTGCATAACGTACTTGAAATGAGTCTTATAGTCATATAACTAATCATCTAAATCATGAAAAGGGTTTAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCTATTTTTGGCCATAAATGACTTATATCGACCCAAATTACCAATAGGCGTGCATAACGAATTTGAAATGAGTTTTATAATCATCTAACTAATCATATAAATCATGAAAAGGGTTATAATGTGGAAAGAGGTTCGTTTGTGGTAGTTGGGTTCAAAAATGCCAATTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGAATAACGAACTTGAAATGAGTCCTATAAACATATAAATAATCATATGAATCATGAAAAAGATTTAGAAAGTTTCCTTAGGTTCATTTGTTGATAATTGGGATCGAAAATGCCATTTTGGCCAAATATGATTTATATCGAGCCAAATGAGCCTTAGATGTGCATAAGGAACTTGAATTGAATCTTAGTACACTCAGAAAGTTGTTTTCGCGACCAATATAATTTTTGTTTTCGCATATGAAACTTAATTTAATTTATTGGGTTGCATGTACTTTGTTCTTTTAAAGGTTTTCAAAACTCCAAGGGAGGGACCCTTTTAACAAAGAGGAGTTGGATGAAGTTCGAGACAAGTTGGTTACTTACTTCAATGATTGTGAACTACCCTCAGTGTAATAAATAGAGCAGGCTTGTAGTTATCCGTGACTATTATATTATTTTGTTATTTATCGATTTAATTAATTACATTTGAATTAATTCGTAATATTATTGGAAATTTGAAATTTATATCATTTTTGAGGAATGTCAAGCTGATGTTTGGTGAAACAGTATTCTATAAATTATAATGCAGGATTTTATATTGCTAAATCAGAA

mRNA sequence

ATGAAAGGCAGAGACCCCCTCTTCGAGCCTTGCACGCCGAAGGGATGTCTTGAGCTTCTGTCTCGAAGTGGTATTAGTGTAAAAGGCAAAATGGCAGTTGTTGTAGGTCGTAGTAATATTGTTGGATTGCCAGTATCACTCCTCCTCTTGAAAGAATATGCAGCAGTTAGTATTGTCTACTCTCGTACAACTGATCCTGAAATCATTATTCGTCAAGCTGACATCGTCATTGCTATAGCAGGACAAGCCATGATGGTTCTTCTCAGGAATAGTCGTGTGGGACTGCTTTCCAGGACAGAGAGAGAACTAGCGGTCTCCCAGTTCCTCAAGAAGATCAACCAATGGAGGTTTTGGCTGGGAAACACTTGAGACAGCATCTGCAACACCCTAACATGAAGGGGAATTCAGGCCGGAGCAGTCTAGATTATTCTGCAATTGGTGATGGGAGTTTCTCAACTTCTGAAAAATCGGGGGAGAAAAAGAGAGCCAAGGCAGAAAAAACAATTACATTGGAAGTTCTTTGTCAGCATTTTGCAGGAAGCCTCAAGGATGTTGCGAAGAGCATTGGTGGTTTTCAAAACTCCAAGGGAGGGACCCTTTTAACAAAGAGGAGTTGGATGAAGTTCGAGACAAGTTGGTTACTTACTTCAATGATTGTGAACTACCCTCAGTGTAATAAATAGAGCAGGCTTGTAGTTATCCGTGACTATTATATTATTTTGTTATTTATCGATTTAATTAATTACATTTGAATTAATTCGTAATATTATTGGAAATTTGAAATTTATATCATTTTTGAGGAATGTCAAGCTGATGTTTGGTGAAACAGTATTCTATAAATTATAATGCAGGATTTTATATTGCTAAATCAGAA

Coding sequence (CDS)

ATGAAAGGCAGAGACCCCCTCTTCGAGCCTTGCACGCCGAAGGGATGTCTTGAGCTTCTGTCTCGAAGTGGTATTAGTGTAAAAGGCAAAATGGCAGTTGTTGTAGGTCGTAGTAATATTGTTGGATTGCCAGTATCACTCCTCCTCTTGAAAGAATATGCAGCAGTTAGTATTGTCTACTCTCGTACAACTGATCCTGAAATCATTATTCGTCAAGCTGACATCGTCATTGCTATAGCAGGACAAGCCATGATGGTTCTTCTCAGGAATAGTCGTGTGGGACTGCTTTCCAGGACAGAGAGAGAACTAGCGGTCTCCCAGTTCCTCAAGAAGATCAACCAATGGAGGTTTTGGCTGGGAAACACTTGA

Protein sequence

MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVYSRTTDPEIIIRQADIVIAIAGQAMMVLLRNSRVGLLSRTERELAVSQFLKKINQWRFWLGNT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17946.1Spo17946.1mRNA


Homology
[Close]
BLAST of Spo17946.1 vs. NCBI nr
Match: gi|902182765|gb|KNA09988.1| (hypothetical protein SOVF_148510 [Spinacia oleracea])

HSP 1 Score: 164.5 bits (415), Expect = 1.200e-37
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 1 

		  

Query: 1  MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
          MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY
Sbjct: 1  MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60

Query: 61 SRTTDPEIIIRQADIVIAIAGQAMMVL 88
          SRTTDPEIIIRQADIVIAIAGQAMM++
Sbjct: 61 SRTTDPEIIIRQADIVIAIAGQAMMMI 87
[Close]
BLAST of Spo17946.1 vs. NCBI nr
Match: gi|902197374|gb|KNA13406.1| (hypothetical protein SOVF_117270 [Spinacia oleracea])

HSP 1 Score: 152.9 bits (385), Expect = 3.600e-34
Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLK  A VSIV+
Sbjct: 133 MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKADATVSIVH 192

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRTTDPEIIIRQADIVIA AGQAMM+
Sbjct: 193 SRTTDPEIIIRQADIVIAAAGQAMMI 218
[Close]
BLAST of Spo17946.1 vs. NCBI nr
Match: gi|242086917|ref|XP_002439291.1| (hypothetical protein SORBIDRAFT_09g003920 [Sorghum bicolor])

HSP 1 Score: 141.7 bits (356), Expect = 8.300e-31
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF+PCTPKGC+ELLSRSG++VKGK AVVVGRSNIVGLPVSLLLLKE A VSIV+
Sbjct: 132 MKGREPLFQPCTPKGCMELLSRSGVTVKGKRAVVVGRSNIVGLPVSLLLLKEDATVSIVH 191

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT DPE I+R+ADIVIA AGQAMM+
Sbjct: 192 SRTPDPESIVREADIVIAAAGQAMMI 217
[Close]
BLAST of Spo17946.1 vs. NCBI nr
Match: gi|1009148332|ref|XP_015891881.1| (PREDICTED: bifunctional protein FolD 2 [Ziziphus jujuba])

HSP 1 Score: 140.2 bits (352), Expect = 2.400e-30
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGRDPLF PCTPKGCLELLSRSG+S+KGK AVVVGRSNIVGLPV+LLLLKE A V+IV+
Sbjct: 141 MKGRDPLFLPCTPKGCLELLSRSGVSIKGKKAVVVGRSNIVGLPVALLLLKEDATVTIVH 200

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT DPEI+IR+ADI+IA AGQA M+
Sbjct: 201 SRTPDPEIVIREADIIIAAAGQASMI 226
[Close]
BLAST of Spo17946.1 vs. NCBI nr
Match: gi|763780014|gb|KJB47085.1| (hypothetical protein B456_008G010500 [Gossypium raimondii])

HSP 1 Score: 139.8 bits (351), Expect = 3.100e-30
Identity = 71/87 (81.61%), Postives = 80/87 (91.95%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF+PCTPKGCLELLSRSG+SVKGK AVVVGRSNIVGLPVSLLLLK  A V+IV+
Sbjct: 139 MKGREPLFQPCTPKGCLELLSRSGVSVKGKNAVVVGRSNIVGLPVSLLLLKADATVTIVH 198

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMVL 88
           SRT DPE ++R+ADIVIA AGQAMMV+
Sbjct: 199 SRTPDPERLVREADIVIAAAGQAMMVI 225
[Close]
BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148510 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.300e-38
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 1 

		  

Query: 1  MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
          MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY
Sbjct: 1  MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60

Query: 61 SRTTDPEIIIRQADIVIAIAGQAMMVL 88
          SRTTDPEIIIRQADIVIAIAGQAMM++
Sbjct: 61 SRTTDPEIIIRQADIVIAIAGQAMMMI 87
[Close]
BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1K2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117270 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.500e-34
Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLK  A VSIV+
Sbjct: 133 MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKADATVSIVH 192

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRTTDPEIIIRQADIVIA AGQAMM+
Sbjct: 193 SRTTDPEIIIRQADIVIAAAGQAMMI 218
[Close]
BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Match: C5Z052_SORBI (Putative uncharacterized protein Sb09g003920 OS=Sorghum bicolor GN=Sb09g003920 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.800e-31
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF+PCTPKGC+ELLSRSG++VKGK AVVVGRSNIVGLPVSLLLLKE A VSIV+
Sbjct: 132 MKGREPLFQPCTPKGCMELLSRSGVTVKGKRAVVVGRSNIVGLPVSLLLLKEDATVSIVH 191

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT DPE I+R+ADIVIA AGQAMM+
Sbjct: 192 SRTPDPESIVREADIVIAAAGQAMMI 217
[Close]
BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BES3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g045600 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.200e-30
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF PCTPKGCLELLSRSGIS+KGK AVVVGRSNIVGLPVSLLLLK  A VSIV+
Sbjct: 140 MKGREPLFHPCTPKGCLELLSRSGISIKGKKAVVVGRSNIVGLPVSLLLLKADATVSIVH 199

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           S TTDP+ IIR+ADIVIA AGQAMM+
Sbjct: 200 SHTTDPKSIIREADIVIAAAGQAMMI 225
[Close]
BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TUW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G010500 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.200e-30
Identity = 71/87 (81.61%), Postives = 80/87 (91.95%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF+PCTPKGCLELLSRSG+SVKGK AVVVGRSNIVGLPVSLLLLK  A V+IV+
Sbjct: 139 MKGREPLFQPCTPKGCLELLSRSGVSVKGKNAVVVGRSNIVGLPVSLLLLKADATVTIVH 198

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMVL 88
           SRT DPE ++R+ADIVIA AGQAMMV+
Sbjct: 199 SRTPDPERLVREADIVIAAAGQAMMVI 225
[Close]
BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Match: FOLD2_ARATH (Bifunctional protein FolD 2 OS=Arabidopsis thaliana GN=FOLD2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-28
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF PCTPKGCLELL+RSG+ +KG+ AVVVGRSNIVGLPVSLLLLK  A V+ V+
Sbjct: 139 MKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVGLPVSLLLLKADATVTTVH 198

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           S T DPE IIR+ADIVIA  GQA M+
Sbjct: 199 SHTKDPEAIIREADIVIAACGQAHMI 224
[Close]
BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Match: FOLD4_ARATH (Bifunctional protein FolD 4, chloroplastic OS=Arabidopsis thaliana GN=FOLD4 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.000e-24
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF PCTPKGC+ELL R  I +KGK AVV+GRSNIVG+P +LLL +E A VSI++
Sbjct: 199 MRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIIH 258

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT +PE I R+ADI+I+  GQ  MV
Sbjct: 259 SRTKNPEEITREADIIISAVGQPNMV 284
[Close]
BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Match: FOLD3_ARATH (Bifunctional protein FolD 3, chloroplastic OS=Arabidopsis thaliana GN=FOLD3 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.800e-24
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF PCTPKGC+ELL R  I  KGK AVV+GRSNIVG+P +LLL KE A VSI++
Sbjct: 149 MRGREPLFVPCTPKGCIELLHRYNIEFKGKRAVVIGRSNIVGMPAALLLQKEDATVSIIH 208

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT +PE + RQADI+I+  G+  MV
Sbjct: 209 SRTMNPEELTRQADILISAVGKPNMV 234
[Close]
BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Match: FOLD1_ARATH (Bifunctional protein FolD 1, mitochondrial OS=Arabidopsis thaliana GN=FOLD1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.100e-22
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF  CTPKGC+ELL R+G+ + GK AVV+GRSNIVGLP+SLLL +  A VS V+
Sbjct: 193 MRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVH 252

Query: 61  SRTTDPEIIIRQADIVIAIAG 82
           + T DPE I R+ADIVIA AG
Sbjct: 253 AFTKDPEHITRKADIVIAAAG 273
[Close]
BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Match: FOLD_MAGMM (Bifunctional protein FolD OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=folD PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.100e-18
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 1 

		  

Query: 5   DPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVYSRTT 64
           DP F+PCTP G +E+L  SG+  KGK AVV+GRSNIVG PV+L+LL  +A V+I +SRT 
Sbjct: 134 DPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLLAAHATVTICHSRTP 193

Query: 65  DPEIIIRQADIVIAIAGQAMMV 87
           D    +++ADIV+A  G+A MV
Sbjct: 194 DLAETVKRADIVVAAVGRANMV 215
[Close]
BLAST of Spo17946.1 vs. TAIR (Arabidopsis)
Match: AT3G12290.1 (Amino acid dehydrogenase family protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.300e-29
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           MKGR+PLF PCTPKGCLELL+RSG+ +KG+ AVVVGRSNIVGLPVSLLLLK  A V+ V+
Sbjct: 139 MKGREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSNIVGLPVSLLLLKADATVTTVH 198

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           S T DPE IIR+ADIVIA  GQA M+
Sbjct: 199 SHTKDPEAIIREADIVIAACGQAHMI 224
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BLAST of Spo17946.1 vs. TAIR (Arabidopsis)
Match: AT4G00620.1 (Amino acid dehydrogenase family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.100e-25
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF PCTPKGC+ELL R  I +KGK AVV+GRSNIVG+P +LLL +E A VSI++
Sbjct: 199 MRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIIH 258

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT +PE I R+ADI+I+  GQ  MV
Sbjct: 259 SRTKNPEEITREADIIISAVGQPNMV 284
[Close]
BLAST of Spo17946.1 vs. TAIR (Arabidopsis)
Match: AT4G00600.1 (Amino acid dehydrogenase family protein)

HSP 1 Score: 110.9 bits (276), Expect = 5.500e-25
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF PCTPKGC+ELL R  I  KGK AVV+GRSNIVG+P +LLL KE A VSI++
Sbjct: 149 MRGREPLFVPCTPKGCIELLHRYNIEFKGKRAVVIGRSNIVGMPAALLLQKEDATVSIIH 208

Query: 61  SRTTDPEIIIRQADIVIAIAGQAMMV 87
           SRT +PE + RQADI+I+  G+  MV
Sbjct: 209 SRTMNPEELTRQADILISAVGKPNMV 234
[Close]
BLAST of Spo17946.1 vs. TAIR (Arabidopsis)
Match: AT2G38660.1 (Amino acid dehydrogenase family protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.300e-23
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1 

		  

Query: 1   MKGRDPLFEPCTPKGCLELLSRSGISVKGKMAVVVGRSNIVGLPVSLLLLKEYAAVSIVY 60
           M+GR+PLF  CTPKGC+ELL R+G+ + GK AVV+GRSNIVGLP+SLLL +  A VS V+
Sbjct: 193 MRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVH 252

Query: 61  SRTTDPEIIIRQADIVIAIAG 82
           + T DPE I R+ADIVIA AG
Sbjct: 253 AFTKDPEHITRKADIVIAAAG 273
The following BLAST results are available for this feature:
BLAST of Spo17946.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902182765|gb|KNA09988.1|1.2e-3797.7hypothetical protein SOVF_1485... [more]
gi|902197374|gb|KNA13406.1|3.6e-3493.0hypothetical protein SOVF_1172... [more]
gi|242086917|ref|XP_002439291.1|8.3e-3182.5hypothetical protein SORBIDRAF... [more]
gi|1009148332|ref|XP_015891881.1|2.4e-3081.4PREDICTED: bifunctional protei... [more]
gi|763780014|gb|KJB47085.1|3.1e-3081.6hypothetical protein B456_008G... [more]
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BLAST of Spo17946.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QTG7_SPIOL8.3e-3897.7Uncharacterized protein OS=Spi... [more]
A0A0K9R1K2_SPIOL2.5e-3493.0Uncharacterized protein OS=Spi... [more]
C5Z052_SORBI5.8e-3182.5Putative uncharacterized prote... [more]
A0A0J8BES3_BETVU2.2e-3083.7Uncharacterized protein OS=Bet... [more]
A0A0D2TUW7_GOSRA2.2e-3081.6Uncharacterized protein OS=Gos... [more]
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BLAST of Spo17946.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FOLD2_ARATH2.2e-2874.4Bifunctional protein FolD 2 OS... [more]
FOLD4_ARATH2.0e-2463.9Bifunctional protein FolD 4, c... [more]
FOLD3_ARATH9.8e-2463.9Bifunctional protein FolD 3, c... [more]
FOLD1_ARATH4.1e-2265.4Bifunctional protein FolD 1, m... [more]
FOLD_MAGMM6.1e-1856.1Bifunctional protein FolD OS=M... [more]
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BLAST of Spo17946.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G12290.11.3e-2974.4Amino acid dehydrogenase famil... [more]
AT4G00620.11.1e-2563.9Amino acid dehydrogenase famil... [more]
AT4G00600.15.5e-2563.9Amino acid dehydrogenase famil... [more]
AT2G38660.12.3e-2365.4Amino acid dehydrogenase famil... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainGENE3D3.40.50.720coord: 5..86
score: 1.4
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 5..83
score: 1.7
IPR020631Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domainPFAMPF02882THF_DHG_CYH_Ccoord: 5..86
score: 9.2
NoneNo IPR availablePANTHERPTHR10025TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBERcoord: 1..86
score: 4.0
NoneNo IPR availablePANTHERPTHR10025:SF33BIFUNCTIONAL PROTEIN FOLD 2coord: 1..86
score: 4.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0007276 gamete generation
biological_process GO:0009561 megagametogenesis
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0016567 protein ubiquitination
biological_process GO:0051302 regulation of cell division
biological_process GO:0032875 regulation of DNA endoreduplication
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006457 protein folding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0000165 MAPK cascade
biological_process GO:0006468 protein phosphorylation
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0009553 embryo sac development
biological_process GO:0048868 pollen tube development
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0008033 tRNA processing
biological_process GO:0009396 folic acid-containing compound biosynthetic process
biological_process GO:0006508 proteolysis
cellular_component GO:0005622 intracellular
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0005819 spindle
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0005797 Golgi medial cisterna
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0019003 GDP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0004477 methenyltetrahydrofolate cyclohydrolase activity
RNA-Seq Expression