Spo18000 (gene) | SpinachBase

Overview


Name	Spo18000
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaA04g19880D protein
Location	Super_scaffold_101 : 322519 .. 322959 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATACAACATGGGAGCAAAAGTTTGAAACCCTAACACACATCTTAACAAACCCAACAACAAACCCATCACTCCACTCACAATACTTCATAGCCAACCAAATTCCCTGCTACCTAAACTGGGATTACCCACCACTCCTCTGCCCCAAATACCAACACCCAACATTCAACCTAAGATGGGCTTTCTCTCTCTTCCTCAAAAGGGCCTCCAGATTAAGGGTATCTTGGAGGTCAAAGTGCCCTTATAGTCAACCCCCACCCTTAATTTTGTCCAATGGAGTTGAAGAAGCTAAATGGGATGATGAAGGGAAAAGGCTGTATTTCAGGAAAAGGGTGTTAAGGAAGAAGCTTCAGAGTGAAGTTAATCCTGTGATCCCAGTTTTAGTCCCAAATATCTTGTTGTTGTGTCTTCTATTTTGGGATCCTTTTCCTCAGTGA

mRNA sequence

ATGGAGGATACAACATGGGAGCAAAAGTTTGAAACCCTAACACACATCTTAACAAACCCAACAACAAACCCATCACTCCACTCACAATACTTCATAGCCAACCAAATTCCCTGCTACCTAAACTGGGATTACCCACCACTCCTCTGCCCCAAATACCAACACCCAACATTCAACCTAAGATGGGCTTTCTCTCTCTTCCTCAAAAGGGCCTCCAGATTAAGGGTATCTTGGAGGTCAAAGTGCCCTTATAGTCAACCCCCACCCTTAATTTTGTCCAATGGAGTTGAAGAAGCTAAATGGGATGATGAAGGGAAAAGGCTGTATTTCAGGAAAAGGGTGTTAAGGAAGAAGCTTCAGAGTGAAGTTAATCCTGTGATCCCAGTTTTAGTCCCAAATATCTTGTTGTTGTGTCTTCTATTTTGGGATCCTTTTCCTCAGTGA

Coding sequence (CDS)

ATGGAGGATACAACATGGGAGCAAAAGTTTGAAACCCTAACACACATCTTAACAAACCCAACAACAAACCCATCACTCCACTCACAATACTTCATAGCCAACCAAATTCCCTGCTACCTAAACTGGGATTACCCACCACTCCTCTGCCCCAAATACCAACACCCAACATTCAACCTAAGATGGGCTTTCTCTCTCTTCCTCAAAAGGGCCTCCAGATTAAGGGTATCTTGGAGGTCAAAGTGCCCTTATAGTCAACCCCCACCCTTAATTTTGTCCAATGGAGTTGAAGAAGCTAAATGGGATGATGAAGGGAAAAGGCTGTATTTCAGGAAAAGGGTGTTAAGGAAGAAGCTTCAGAGTGAAGTTAATCCTGTGATCCCAGTTTTAGTCCCAAATATCTTGTTGTTGTGTCTTCTATTTTGGGATCCTTTTCCTCAGTGA

Protein sequence

MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLRWAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQSEVNPVIPVLVPNILLLCLLFWDPFPQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18000.1	Spo18000.1	mRNA

Homology

[Close]

BLAST of Spo18000.1 vs. NCBI nr
Match: gi|902196777|gb|KNA13199.1| (hypothetical protein SOVF_118880 [Spinacia oleracea])

HSP 1 Score: 315.5 bits (807), Expect = 5.000e-83
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR
Sbjct: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60

Query: 61  WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS 120
           WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS
Sbjct: 61  WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS 120

Query: 121 EVNPVIPVLVPNILLLCLLFWDPFPQ 147
           EVNPVIPVLVPNILLLCLLFWDPFPQ
Sbjct: 121 EVNPVIPVLVPNILLLCLLFWDPFPQ 146

[Close]

BLAST of Spo18000.1 vs. NCBI nr
Match: gi|731350240|ref|XP_010686403.1| (PREDICTED: uncharacterized protein LOC104900628 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 249.6 bits (636), Expect = 3.400e-63
Identity = 113/149 (75.84%), Postives = 127/149 (85.23%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTW QKFE LTHILTNPT NPSLHSQ+FI+ QIPCYLNWDYPPLLCPKYQHP+F+LR
Sbjct: 1   MEDTTWVQKFEALTHILTNPTRNPSLHSQFFISTQIPCYLNWDYPPLLCPKYQHPSFHLR 60

Query: 61  WAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKK 120
           W FSLFLKR S       SWRSKCPY QPPPLIL+ GV+EAKWDDEGKR Y R+RV RK+
Sbjct: 61  WIFSLFLKRVSIFGTPTTSWRSKCPYIQPPPLILAKGVKEAKWDDEGKRQYMRERVSRKR 120

Query: 121 LQSEVNPVIPVLVPNILLLCLLFWDPFPQ 147
           +QS+VNP+IPVLVPN+ LL  L W+PFP+
Sbjct: 121 IQSDVNPLIPVLVPNLFLLSFLLWNPFPE 149

[Close]

BLAST of Spo18000.1 vs. NCBI nr
Match: gi|595912934|ref|XP_007214508.1| (hypothetical protein PRUPE_ppa016719mg [Prunus persica])

HSP 1 Score: 213.0 bits (541), Expect = 3.500e-52
Identity = 96/147 (65.31%), Postives = 114/147 (77.55%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTWEQ+   LTH+L NPTT P LHSQ+FI+ QIPCYLNWDYPP+LC K   P  +L+
Sbjct: 1   MEDTTWEQRLHALTHVLINPTTTPPLHSQFFISTQIPCYLNWDYPPVLCTKSTFPPIHLQ 60

Query: 61  WAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKK 120
           W  SLFLKR SR      SWRSKCPY  PPPLIL+ G+EEA+W DE +R  FRKR+ RK+
Sbjct: 61  WGLSLFLKRVSRFGFPETSWRSKCPYHLPPPLILAKGIEEAQWGDEQRRENFRKRMRRKR 120

Query: 121 LQSEVNPVIPVLVPNILLLCLLFWDPF 145
           L  +VNPV+P+LVPN+LLL LLFW+PF
Sbjct: 121 LGGDVNPVLPILVPNLLLLSLLFWNPF 147

[Close]

BLAST of Spo18000.1 vs. NCBI nr
Match: gi|224077064|ref|XP_002305116.1| (hypothetical protein POPTR_0004s04800g [Populus trichocarpa])

HSP 1 Score: 212.6 bits (540), Expect = 4.600e-52
Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPK--YQHPTFN 60
           MEDTTWEQ+ + LTH+LT+PTT P L+SQ+FI+ QIPCYL WDYPP+LC K     P+  
Sbjct: 1   MEDTTWEQRLQALTHLLTSPTTTPPLYSQFFISTQIPCYLKWDYPPILCTKDTKTFPSLL 60

Query: 61  LRWAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLR 120
           LRW FSLFLKRASRL     SWRSKCPY QPPPLIL+ G+EEA+W DE +R Y RKR+ R
Sbjct: 61  LRWGFSLFLKRASRLGCPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRREYVRKRLRR 120

Query: 121 KKLQSEVNPVIPVLVPNILLLCLLFWDPFP 146
           KKL S VNP IP+LVPN+LL  L+ W+PFP
Sbjct: 121 KKLVSNVNPFIPILVPNLLLFSLMLWNPFP 150

[Close]

BLAST of Spo18000.1 vs. NCBI nr
Match: gi|698520606|ref|XP_009757118.1| (PREDICTED: uncharacterized protein LOC104210025 [Nicotiana sylvestris])

HSP 1 Score: 211.8 bits (538), Expect = 7.800e-52
Identity = 98/151 (64.90%), Postives = 117/151 (77.48%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTF--- 60
           MEDT W+Q+ + LTHI+TNPTT PSL SQ FI++Q+PCYLNWDYPP+LC KY   TF   
Sbjct: 1   MEDTRWDQRIQALTHIITNPTTKPSLDSQIFISSQVPCYLNWDYPPILCTKYSTNTFPSV 60

Query: 61  NLRWAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVL 120
           NLRWA S+FLKR SRL     SWRSKCPY QPPPLIL+ G+EEA W DE +RLY RKR  
Sbjct: 61  NLRWALSVFLKRVSRLGAPETSWRSKCPYQQPPPLILAKGLEEAHWGDEQRRLYVRKRFK 120

Query: 121 RKKLQSEVNPVIPVLVPNILLLCLLFWDPFP 146
           R+ L S+V+P+IP +VPN+LL  LL W+PFP
Sbjct: 121 RRHLGSDVHPLIPFIVPNLLLFSLLLWNPFP 151

[Close]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2P4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118880 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.500e-83
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR
Sbjct: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60

Query: 61  WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS 120
           WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS
Sbjct: 61  WAFSLFLKRASRLRVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKKLQS 120

Query: 121 EVNPVIPVLVPNILLLCLLFWDPFPQ 147
           EVNPVIPVLVPNILLLCLLFWDPFPQ
Sbjct: 121 EVNPVIPVLVPNILLLCLLFWDPFPQ 146

[Close]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182570 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.300e-63
Identity = 113/149 (75.84%), Postives = 127/149 (85.23%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTW QKFE LTHILTNPT NPSLHSQ+FI+ QIPCYLNWDYPPLLCPKYQHP+F+LR
Sbjct: 1   MEDTTWVQKFEALTHILTNPTRNPSLHSQFFISTQIPCYLNWDYPPLLCPKYQHPSFHLR 60

Query: 61  WAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKK 120
           W FSLFLKR S       SWRSKCPY QPPPLIL+ GV+EAKWDDEGKR Y R+RV RK+
Sbjct: 61  WIFSLFLKRVSIFGTPTTSWRSKCPYIQPPPLILAKGVKEAKWDDEGKRQYMRERVSRKR 120

Query: 121 LQSEVNPVIPVLVPNILLLCLLFWDPFPQ 147
           +QS+VNP+IPVLVPN+ LL  L W+PFP+
Sbjct: 121 IQSDVNPLIPVLVPNLFLLSFLLWNPFPE 149

[Close]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Match: M5WPK8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016719mg PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.400e-52
Identity = 96/147 (65.31%), Postives = 114/147 (77.55%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           MEDTTWEQ+   LTH+L NPTT P LHSQ+FI+ QIPCYLNWDYPP+LC K   P  +L+
Sbjct: 1   MEDTTWEQRLHALTHVLINPTTTPPLHSQFFISTQIPCYLNWDYPPVLCTKSTFPPIHLQ 60

Query: 61  WAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKK 120
           W  SLFLKR SR      SWRSKCPY  PPPLIL+ G+EEA+W DE +R  FRKR+ RK+
Sbjct: 61  WGLSLFLKRVSRFGFPETSWRSKCPYHLPPPLILAKGIEEAQWGDEQRRENFRKRMRRKR 120

Query: 121 LQSEVNPVIPVLVPNILLLCLLFWDPF 145
           L  +VNPV+P+LVPN+LLL LLFW+PF
Sbjct: 121 LGGDVNPVLPILVPNLLLLSLLFWNPF 147

[Close]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Match: B9H2R0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04800g PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.200e-52
Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPK--YQHPTFN 60
           MEDTTWEQ+ + LTH+LT+PTT P L+SQ+FI+ QIPCYL WDYPP+LC K     P+  
Sbjct: 1   MEDTTWEQRLQALTHLLTSPTTTPPLYSQFFISTQIPCYLKWDYPPILCTKDTKTFPSLL 60

Query: 61  LRWAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLR 120
           LRW FSLFLKRASRL     SWRSKCPY QPPPLIL+ G+EEA+W DE +R Y RKR+ R
Sbjct: 61  LRWGFSLFLKRASRLGCPETSWRSKCPYQQPPPLILAKGLEEAQWGDEQRREYVRKRLRR 120

Query: 121 KKLQSEVNPVIPVLVPNILLLCLLFWDPFP 146
           KKL S VNP IP+LVPN+LL  L+ W+PFP
Sbjct: 121 KKLVSNVNPFIPILVPNLLLFSLMLWNPFP 150

[Close]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Match: A0A067JB21_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21477 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.000e-50
Identity = 94/150 (62.67%), Postives = 115/150 (76.67%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPK--YQHPTFN 60
           MEDTTWEQ+ + LTHILT+P T P L+SQ+FI+N +PCYLNWDYPP+LC K     P+ +
Sbjct: 1   MEDTTWEQRLQALTHILTSPITTPDLYSQFFISNHVPCYLNWDYPPILCTKDTRSFPSLH 60

Query: 61  LRWAFSLFLKRASRL---RVSWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLR 120
           LRW FSLFLKR SRL     SWRSKCPY QPPPL+L+ GVEEA+W  E KR Y RKR+ R
Sbjct: 61  LRWGFSLFLKRVSRLGFPETSWRSKCPYQQPPPLVLAKGVEEAQWSAEFKREYVRKRLRR 120

Query: 121 KKLQSEVNPVIPVLVPNILLLCLLFWDPFP 146
           K L + ++P+IP+LVPN+ L  LL W+PFP
Sbjct: 121 KTLANNIHPLIPILVPNLFLFSLLLWNPFP 150

[Close]

BLAST of Spo18000.1 vs. TAIR (Arabidopsis)
Match: AT2G33855.1 (unknown protein)

HSP 1 Score: 165.2 bits (417), Expect = 2.900e-41
Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 1


		  
Query: 1   MEDTTWEQKFETLTHILTNPTTNPSLHSQYFIANQIPCYLNWDYPPLLCPKYQHPTFNLR 60
           ME+TTW Q+ + +THILTNPTT PSL+SQ+FI   IP Y++WDYPP+  P +       +
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSPTHLR-----Q 60

Query: 61  WAFSLFLKRASRLRV---SWRSKCPYSQPPPLILSNGVEEAKWDDEGKRLYFRKRVLRKK 120
           W  S F KR SR  +   SWRS  PY QPP  +++ GVEE KW  E +R Y RKR+ RK+
Sbjct: 61  WWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRLRRKR 120

Query: 121 LQSEVNPVIPVLVPNILLLCLLFWDPFPQ 147
           L +EVNP IP+LVPN+LL  LL WDP P+
Sbjct: 121 LVNEVNPYIPLLVPNLLLFTLLLWDPLPE 144

The following BLAST results are available for this feature:

BLAST of Spo18000.1 vs. NCBI nr
BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
BLAST of Spo18000.1 vs. ExPASy Swiss-Prot
BLAST of Spo18000.1 vs. TAIR (Arabidopsis)

BLAST of Spo18000.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902196777\|gb\|KNA13199.1\|	5.0e-83	100.	hypothetical protein SOVF_1188...	[more]
gi\|731350240\|ref\|XP_010686403.1\|	3.4e-63	75.8	PREDICTED: uncharacterized pro...	[more]
gi\|595912934\|ref\|XP_007214508.1\|	3.5e-52	65.3	hypothetical protein PRUPE_ppa...	[more]
gi\|224077064\|ref\|XP_002305116.1\|	4.6e-52	66.0	hypothetical protein POPTR_000...	[more]
gi\|698520606\|ref\|XP_009757118.1\|	7.8e-52	64.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo18000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2P4_SPIOL	3.5e-83	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8ENP5_BETVU	2.3e-63	75.8	Uncharacterized protein OS=Bet...	[more]
M5WPK8_PRUPE	2.4e-52	65.3	Uncharacterized protein OS=Pru...	[more]
B9H2R0_POPTR	3.2e-52	66.0	Uncharacterized protein OS=Pop...	[more]
A0A067JB21_JATCU	1.0e-50	62.6	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo18000.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo18000.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G33855.1	2.9e-41	53.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38364	FAMILY NOT NAMED	coord: 1..145 score: 2.0
None	No IPR available	PANTHER	PTHR38364:SF1	SUBFAMILY NOT NAMED	coord: 1..145 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0048481	plant ovule development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0043686	co-translational protein modification
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042793	plastid transcription
biological_process	GO:0006508	proteolysis
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0051607	defense response to virus
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0051604	protein maturation
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0010007	magnesium chelatase complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009349	riboflavin synthase complex
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0042586	peptide deformylase activity
molecular_function	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046422	violaxanthin de-epoxidase activity
molecular_function	GO:0016851	magnesium chelatase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0008236	serine-type peptidase activity
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13575	0.77	Barchart \| Table
Spo09384	0.76	Barchart \| Table
Spo15389	0.75	Barchart \| Table
Spo02751	0.74	Barchart \| Table
Spo24805	0.70	Barchart \| Table
Spo01255	0.70	Barchart \| Table
Spo15793	0.70	Barchart \| Table
Spo09019	0.69	Barchart \| Table
Spo09487	0.68	Barchart \| Table
Spo18232	0.68	Barchart \| Table
Spo15244	0.68	Barchart \| Table
Spo18336	0.68	Barchart \| Table
Spo18695	0.68	Barchart \| Table
Spo27055	0.67	Barchart \| Table
Spo08505	0.67	Barchart \| Table
Spo17668	0.67	Barchart \| Table
Spo17919	0.67	Barchart \| Table
Spo01928	0.66	Barchart \| Table
Spo18184	0.65	Barchart \| Table
Spo09321	0.65	Barchart \| Table
Spo00214	0.65	Barchart \| Table