Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAAACGAATTCGTCTTTCTTTATATATATTCAGTTCAATTCAACCAAACAAAGTTCAGAAAAACAGTACCTTAAACAAGGGACAGATGAATTACTTAATACTCCGTACTACTACTACTAACTACTCGCGAATCGAACTTTAAAAAGTTTTTTAAAAAAAACTCTCACCTACACGTTATGGGTCCCACACGAAAATTAACGTTGAAATATTTCAAAACATCTCTCGCGCCTTTGTCAAATTACTCAAATATTTCAAACTCCAAATCACAAAAAATAACTGGAAAATAAAATTGCGACATTTCAAAAAAATTTAACCATCTTTTTAAAAAGTTGGCGCTATTTTCAACCCGCAAAAATCAAAACCAACATTTTTAATTTCCCGGCATTCTCATTATCTCTACCTTTGAATTCATTTTTAGTCTCTCCAAAACCTAAACAATCCCAAATCGTTTCAACATTCTTCCCTAATCTCCCAATTTTCTCTGCTAATCTTTCTCTCCCAAAAATGGATGCAAACTTCAATTCTTTACCTCCATTAAAACGTTTCAGGCTGCTGCAACAACAAGAACAGCAGCAGCAGCAGCTTGCTTTGTCGAAACCTGAATCGGTGCTGAAGCCGAAAGCTTTACCATTTTCACCCTCTAACCTCCCAGCTAAAAAGAGAAAATATACCCGAGATTCATTTTTTGATTTCGATGAAAACAAAGAAAACATCCCTCCTTCAATCAGCCCTCCTACACCCTACTGTTTACCTACCAAGAAAAGGATTTGGGCGATTAAACCCGAACTCAGCCCTGTTAAATCCACTCTTCCTTTAACCATTGATCTGAATCTAGAGTATGACCCATCTGTTGAATCTAAAGTGGAGAGTGATGTTGGGGAGGAGGAATCGATTCGAGTCGAAATCGAAGTGGAAGGAAAAGATGATGATGATGATGATGATGGGATATTATGTGCTGTATGTGAGAGCACAGATGGTGATCCATCAGATCCGATTGTGTTTTGTGATGGATGTGAACTTATGGTTCATTCCAGTTGTTATGGTAACCCTCTTGTTAAGGGTATTCCTCAAGGAGAATGGTTCTGTGCTCAATGCTCAGACTTAAACTCACAACTTCCGGCTTGCAAGTACAAATGTTGTCTTTGTCCTGCAACTGGTGGTGCTATGAAGCCTACGAGTGATGGCCAGTGGGCCCACATTGTGTGTGCTGTTTTAGTCCCAGAGGTTTTCTTTGAAGATCCCGAGGGCCGGGACGGGATCGATTGCTCCAAGATCCCTAAGAGGAGGTGGAGGGATATGTGTTATTTGTGTAAAGGGACTAATGGGTGTGCTATTCAGTGTTCTGAGATTAAGTGTCCTTTGGCATTTCATGTCAGTTGTGGTTTGAAGGATGATCTCACTATTGAGCTTAAAGAAGGGAAAAATACTGGTGGGATTGTTGCTGGGTTTTGCAAAAAACACACAGAACTCTGGAAAAAGGTTAAATTTTATCACTTTTTATCTTATGTTGTGTTAGGCCATGTTCTGTTCACCTTATTTCCACTTATTTCAGGAAAGATAAGTTCAGATAAGTTCANTTAGGCCATGTTCTGTTCACCTTATTTCCACTTATTTCAGGAAAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGATAAGTTCAGTTAAGTTCAGTTAAGTTCAGATAAGTTCAGATAAGATAAGTTTAGGAAAAATAAGGTTGGTCAAGTACAATTTANTTAGGCCATGTTCTGTTCACCTTATTTCCACTTATTTCAGGAAAGATAAGTTCAGATAAGTTCAGTTAAATTCAGATAAGATAAGTTTAGGAAAAATAAGGTTGGTCAAGTACAATTTATAACTAAAATAAGTTTTGATAAGTTTTAATAAGTTCAGATAAATTCAGATAAGATAAGTTCAGGAAAAATAAGTGTAAATCAGGTGAATAGAACGCAACCTTAATAAGATGTGAAAATGGTTGATACTTATGTCGTTTTTGCTTCGTTTGATTTTCATTCTTGCAGCAAAAACAAACAGGAAAGTTCAAGATTGTGGCCAGAGATGAGGACCAGAAGTTCTGACAACTTTGAATTGGTTGAAAGTTTCTGAATTCTGGGTTTTAGCAAACACAATAGTAGTTTTTTTTTTTGTTTGTTTATTTTGTTTTGGATTATGGGTATTAGGGATCTTTTGATTTTAGATAGATACTGACGAATGTGATCTGAAATACATGCTAGTCGTTTCTTTTTTATTGAAAAATTGCACCTGTAATTCAATCATAAAACATGTTCCATGTAATGTTCACATCAGTTGAATATGAATCAGTGGTTTATTCCTTGATATTTCATTCAAGCAGCATTCTCGAGCCGAATAGCTGATGAGCTAATCCAAAGCTAATAACTAGTTGTGCAATTGTGCTACTATGTTAGTCTCCCTTGAGTTTTTCCGAGTTAATCTCGTTGATTGGGAAAATTGTCCCAATCAAATGGCATTTCTGTAAATAAATGAACATTTTATTACAAAAATGCCATTAAAAGTGG CAAAAAAACGAATTCGTCTTTCTTTATATATATTCAGTTCAATTCAACCAAACAAAGTTCAGAAAAACAGTACCTTAAACAAGGGACAGATGAATTACTTAATACTCCGTACTACTACTACTAACTACTCGCGAATCGAACTTTAAAAAGTTTTTTAAAAAAAACTCTCACCTACACGTTATGGGTCCCACACGAAAATTAACGTTGAAATATTTCAAAACATCTCTCGCGCCTTTGTCAAATTACTCAAATATTTCAAACTCCAAATCACAAAAAATAACTGGAAAATAAAATTGCGACATTTCAAAAAAATTTAACCATCTTTTTAAAAAGTTGGCGCTATTTTCAACCCGCAAAAATCAAAACCAACATTTTTAATTTCCCGGCATTCTCATTATCTCTACCTTTGAATTCATTTTTAGTCTCTCCAAAACCTAAACAATCCCAAATCGTTTCAACATTCTTCCCTAATCTCCCAATTTTCTCTGCTAATCTTTCTCTCCCAAAAATGGATGCAAACTTCAATTCTTTACCTCCATTAAAACGTTTCAGGCTGCTGCAACAACAAGAACAGCAGCAGCAGCAGCTTGCTTTGTCGAAACCTGAATCGGTGCTGAAGCCGAAAGCTTTACCATTTTCACCCTCTAACCTCCCAGCTAAAAAGAGAAAATATACCCGAGATTCATTTTTTGATTTCGATGAAAACAAAGAAAACATCCCTCCTTCAATCAGCCCTCCTACACCCTACTGTTTACCTACCAAGAAAAGGATTTGGGCGATTAAACCCGAACTCAGCCCTGTTAAATCCACTCTTCCTTTAACCATTGATCTGAATCTAGAGTATGACCCATCTGTTGAATCTAAAGTGGAGAGTGATGTTGGGGAGGAGGAATCGATTCGAGTCGAAATCGAAGTGGAAGGAAAAGATGATGATGATGATGATGATGGGATATTATGTGCTGTATGTGAGAGCACAGATGGTGATCCATCAGATCCGATTGTGTTTTGTGATGGATGTGAACTTATGGTTCATTCCAGTTGTTATGGTAACCCTCTTGTTAAGGGTATTCCTCAAGGAGAATGGTTCTGTGCTCAATGCTCAGACTTAAACTCACAACTTCCGGCTTGCAAGTACAAATGTTGTCTTTGTCCTGCAACTGGTGGTGCTATGAAGCCTACGAGTGATGGCCAGTGGGCCCACATTGTGTGTGCTGTTTTAGTCCCAGAGGTTTTCTTTGAAGATCCCGAGGGCCGGGACGGGATCGATTGCTCCAAGATCCCTAAGAGGAGGTGGAGGGATATGTGTTATTTGTGTAAAGGGACTAATGGGTGTGCTATTCAGTGTTCTGAGATTAAGTGTCCTTTGGCATTTCATGTCAGTTGTGGTTTGAAGGATGATCTCACTATTGAGCTTAAAGAAGGGAAAAATACTGGTGGGATTGTTGCTGGGTTTTGCAAAAAACACACAGAACTCTGGAAAAAGCAAAAACAAACAGGAAAGTTCAAGATTGTGGCCAGAGATGAGGACCAGAAGTTCTGACAACTTTGAATTGGTTGAAAGTTTCTGAATTCTGGGTTTTAGCAAACACAATAGTAGTTTTTTTTTTTGTTTGTTTATTTTGTTTTGGATTATGGGTATTAGGGATCTTTTGATTTTAGATAGATACTGACGAATGTGATCTGAAATACATGCTAGTCGTTTCTTTTTTATTGAAAAATTGCACCTGTAATTCAATCATAAAACATGTTCCATGTAATGTTCACATCAGTTGAATATGAATCAGTGGTTTATTCCTTGATATTTCATTCAAGCAGCATTCTCGAGCCGAATAGCTGATGAGCTAATCCAAAGCTAATAACTAGTTGTGCAATTGTGCTACTATGTTAGTCTCCCTTGAGTTTTTCCGAGTTAATCTCGTTGATTGGGAAAATTGTCCCAATCAAATGGCATTTCTGTAAATAAATGAACATTTTATTACAAAAATGCCATTAAAAGTGG ATGGATGCAAACTTCAATTCTTTACCTCCATTAAAACGTTTCAGGCTGCTGCAACAACAAGAACAGCAGCAGCAGCAGCTTGCTTTGTCGAAACCTGAATCGGTGCTGAAGCCGAAAGCTTTACCATTTTCACCCTCTAACCTCCCAGCTAAAAAGAGAAAATATACCCGAGATTCATTTTTTGATTTCGATGAAAACAAAGAAAACATCCCTCCTTCAATCAGCCCTCCTACACCCTACTGTTTACCTACCAAGAAAAGGATTTGGGCGATTAAACCCGAACTCAGCCCTGTTAAATCCACTCTTCCTTTAACCATTGATCTGAATCTAGAGTATGACCCATCTGTTGAATCTAAAGTGGAGAGTGATGTTGGGGAGGAGGAATCGATTCGAGTCGAAATCGAAGTGGAAGGAAAAGATGATGATGATGATGATGATGGGATATTATGTGCTGTATGTGAGAGCACAGATGGTGATCCATCAGATCCGATTGTGTTTTGTGATGGATGTGAACTTATGGTTCATTCCAGTTGTTATGGTAACCCTCTTGTTAAGGGTATTCCTCAAGGAGAATGGTTCTGTGCTCAATGCTCAGACTTAAACTCACAACTTCCGGCTTGCAAGTACAAATGTTGTCTTTGTCCTGCAACTGGTGGTGCTATGAAGCCTACGAGTGATGGCCAGTGGGCCCACATTGTGTGTGCTGTTTTAGTCCCAGAGGTTTTCTTTGAAGATCCCGAGGGCCGGGACGGGATCGATTGCTCCAAGATCCCTAAGAGGAGGTGGAGGGATATGTGTTATTTGTGTAAAGGGACTAATGGGTGTGCTATTCAGTGTTCTGAGATTAAGTGTCCTTTGGCATTTCATGTCAGTTGTGGTTTGAAGGATGATCTCACTATTGAGCTTAAAGAAGGGAAAAATACTGGTGGGATTGTTGCTGGGTTTTGCAAAAAACACACAGAACTCTGGAAAAAGCAAAAACAAACAGGAAAGTTCAAGATTGTGGCCAGAGATGAGGACCAGAAGTTCTGA MDANFNSLPPLKRFRLLQQQEQQQQQLALSKPESVLKPKALPFSPSNLPAKKRKYTRDSFFDFDENKENIPPSISPPTPYCLPTKKRIWAIKPELSPVKSTLPLTIDLNLEYDPSVESKVESDVGEEESIRVEIEVEGKDDDDDDDGILCAVCESTDGDPSDPIVFCDGCELMVHSSCYGNPLVKGIPQGEWFCAQCSDLNSQLPACKYKCCLCPATGGAMKPTSDGQWAHIVCAVLVPEVFFEDPEGRDGIDCSKIPKRRWRDMCYLCKGTNGCAIQCSEIKCPLAFHVSCGLKDDLTIELKEGKNTGGIVAGFCKKHTELWKKQKQTGKFKIVARDEDQKF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18149.1 vs. NCBI nr
Match: gi|902219899|gb|KNA18444.1| (hypothetical protein SOVF_070800 [Spinacia oleracea]) HSP 1 Score: 716.8 bits (1849), Expect = 1.700e-203 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1
BLAST of Spo18149.1 vs. NCBI nr
Match: gi|731365851|ref|XP_010694751.1| (PREDICTED: protein Jade-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 506.1 bits (1302), Expect = 4.700e-140 Identity = 256/349 (73.35%), Postives = 293/349 (83.95%), Query Frame = 1
BLAST of Spo18149.1 vs. NCBI nr
Match: gi|694434819|ref|XP_009344612.1| (PREDICTED: protein Jade-1 [Pyrus x bretschneideri]) HSP 1 Score: 399.8 bits (1026), Expect = 4.700e-108 Identity = 204/364 (56.04%), Postives = 251/364 (68.96%), Query Frame = 1
BLAST of Spo18149.1 vs. NCBI nr
Match: gi|731431792|ref|XP_002283700.2| (PREDICTED: protein Jade-1 [Vitis vinifera]) HSP 1 Score: 396.4 bits (1017), Expect = 5.200e-107 Identity = 200/364 (54.95%), Postives = 259/364 (71.15%), Query Frame = 1
BLAST of Spo18149.1 vs. NCBI nr
Match: gi|449456551|ref|XP_004146012.1| (PREDICTED: protein Jade-1 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 3.700e-105 Identity = 195/356 (54.78%), Postives = 247/356 (69.38%), Query Frame = 1
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHL8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070800 PE=4 SV=1) HSP 1 Score: 716.8 bits (1849), Expect = 1.200e-203 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA10_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095350 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 3.300e-140 Identity = 256/349 (73.35%), Postives = 293/349 (83.95%), Query Frame = 1
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Match: F6H2K3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00230 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 3.600e-107 Identity = 200/364 (54.95%), Postives = 259/364 (71.15%), Query Frame = 1
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L1Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622830 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 2.600e-105 Identity = 195/356 (54.78%), Postives = 247/356 (69.38%), Query Frame = 1
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Match: D7L369_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_672329 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 6.400e-104 Identity = 199/366 (54.37%), Postives = 255/366 (69.67%), Query Frame = 1
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Match: JADE1_DANRE (Protein Jade-1 OS=Danio rerio GN=jade1 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.600e-34 Identity = 75/186 (40.32%), Postives = 104/186 (55.91%), Query Frame = 1
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Match: BRPF1_HUMAN (Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2) HSP 1 Score: 144.1 bits (362), Expect = 2.900e-33 Identity = 70/178 (39.33%), Postives = 98/178 (55.06%), Query Frame = 1
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Match: JADE1_HUMAN (Protein Jade-1 OS=Homo sapiens GN=JADE1 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.500e-33 Identity = 75/200 (37.50%), Postives = 105/200 (52.50%), Query Frame = 1
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Match: JADE1_MOUSE (Protein Jade-1 OS=Mus musculus GN=Jade1 PE=1 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 4.200e-32 Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 1
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Match: JADE1_BOVIN (Protein Jade-1 OS=Bos taurus GN=JADE1 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.200e-32 Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 1
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Match: AT3G14740.2 (RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 378.3 bits (970), Expect = 5.200e-105 Identity = 193/364 (53.02%), Postives = 248/364 (68.13%), Query Frame = 1
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Match: AT2G31650.1 (homologue of trithorax) HSP 1 Score: 134.4 bits (337), Expect = 1.300e-31 Identity = 69/197 (35.03%), Postives = 101/197 (51.27%), Query Frame = 1
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Match: AT1G05830.1 (trithorax-like protein 2) HSP 1 Score: 123.2 bits (308), Expect = 3.000e-28 Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = 1
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Match: AT5G53430.1 (SET domain group 29) HSP 1 Score: 105.5 bits (262), Expect = 6.500e-23 Identity = 57/176 (32.39%), Postives = 82/176 (46.59%), Query Frame = 1
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Match: AT3G61740.1 (SET domain protein 14) HSP 1 Score: 104.4 bits (259), Expect = 1.400e-22 Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18149.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18149.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18149.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18149.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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