Spo18169 (gene)

Overview
NameSpo18169
Typegene
OrganismSpinacia oleracea (Spinach)
Description30S ribosomal protein S10, chloroplastic
Locationchr4 : 122125125 .. 122128337 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATTTTTTTATTTTTTATTCCAAATTATTTTCAAAAAAAAAAAAGAGAAAATACTTTTGGATAACATAACCCTGTAAAATCATAGCAGTAGTCTACAGAACCAAGGCAGGAGGAAGAGAAGAGAAAAGATAGAGGCTTGTTTGGGTGACAACAATGGCGACTTCTTCAATTTCTGCTGCACTATTATCTCCCCTCACACTTCGCAATGCATCTTCCTCATCAACCAAACAAGACTTTTCCACCCTCTCTTCTTTAAACCTCAGAAGAACCCTAACTCCTACCTTACAATCGGGACACACCTTATCCAACTCCTCTAATTTCGCAACTTTTGCTGCCCCTGGAGCTTTGGAGGTTCTGGAAACTTCCCCTGATTCATTTGAGGTCAGTTTTTCTGTTTAATTTCAGGCATTTTATTGTTATTTTTCAGTGAGGAACTAGCCTTTGTATTAATTTCTTGGTCTTGCTGAATTTGTTAATAAAGTAATTTGCGTTTAATTTGAGATGGGTACATCTTAAATTGTGTAATTTGCACTTTTTGGTGAAATGGGTATAGGATAATTTATTGGTTTTGGATAATTGGATGATAAATTTGAGATGGGTACATCCTAATTCTGTAATTTGAATAGTTTAGTTTGATGAAATGGGTATATGATTATTTTGGATAATTGGATTATTAATTTTGTTCTGGTGCACTTGTTTTTGGCACGTAATGCTTGGATTAATGTTATTGGGTCATGACTTGTGAGCTTATTGTTGAGAAATTTAGGCTTAATTGCTTAGTCTCTAGATGAAATTAAGTTATCACCGGGAGATTTTGTGCCTGTGCTACATTTTTTGATGTGTGTTTCGATATACGAAGTGTTTGTTTGAATCAAAGGTTGAACAATGTGGTTGTTGGAAGATATGATTGAGAATTTGAGATAGGTGCATAAACTCTCAAGTGGGTAATTTACACTTTATATAGGTCGTTGCTTGGTGTGTATATCCGCTCGTGTGTACGCGTTTTAGCTACATTGTGATTTCCTAGTATTTTGGTTTCAGCATGCAATGAGCCCATGAGAATTGGCAGAATACAGTGTTTTGTTTTTGGTTCAATTTGCTATTCCCAGGTGTGACATATTGAGATATTTCTTAGGTTGTGCTGTTTTGTTGAAGGGGAAGATAAAAGTTTGTTTCTTCTTTTCTTATGGTTGTTCTGTGGTGTTGTGTAGGATGGTTCTGAGACTTCAAAAATCAGCATTGCTGCAGACTCTGATCAGGTATTCAGCTTTTCTTCCCTAGCTTGATCGATATGCTTACTGTTAGAGAGTCAAATTAGCTCAAAATTTTGTAAGCACCGTATGAAGTACAAACCCAAGTGGAAACTATTCCCATCTATGTTCCTTGAACCACGAAGAGTCATATACGTTAAGGAGTTGGCCTATTCCCCCTCAATATCCATCACTTTCACTGGAAAGTTATATGGATAGTACAAACTTCAGACCTTGCTATTTCTTAGCACTAGATGTAAACGTTTGATGCATATTTTGAAAATGAGGTTGGCCTATCTTTCTTGCCGAACTGTCATTGGAAGTGGGAACTTCTTTACTGCTACTTCAAGGATGAGTCTCTAACTATCTGTACTTAAACTGTACTTAAATAGTGACGAAAAAGTTGTATTTTGGATGCAAAAATTTCACAAACTTATGATAAGTTTATTTGCACTTTCAGATGGCTCCAAAGCAGAAGATACGAATAAAACTGAGATCCTACTGGGTTCCCTTGATAGAGGACTCTTGCAAACAGATAATGGATGCTGCAAGGACAACAAATGCAAAAATCATGGGACCTGTACCATTGCCTACAAAGAAGAGGATATACTGTGTACTCAAGTCACCTCATGTGCACAAGGATGCTCGATTTCACTTTGAGATCCGAACTCATCAACGCCTCATTGACATATTGTACCCAACTGCCCAGACAATCGACTCTTTGATGCAGCTAGATCTCCCTGCAGGTGTAGATGTGGAAGTTAAGCTCTAAAGATCCATCTCGGGTAACAACTGTTCACTCATCAGTCTTCTTGTTGATATGAGTAACTGAAAGGACCACTTTTTTTACGCAATTTAGAAGGTGGACCATGGTGCACATAGAGCATGGTGCACCTTAAGAACATTAGTGTATAATTAAAAGAACATCTGGTTACGTAAAAAGAACATCGACATATATTTTTTTATATTTTTAATAAATTGTGATTTTTTATAACAAAAAAGTAAAACATTATATTGCATGTTCTTTTGTCGTAGTGTCATGTTCTTTTGTTTATGCACATGTGTTCTTTTGTTTATGCACATGTGTTCTTTTGGTGCACATGGTGCACCATGCTCTATGTGCACCATGGTCCATAGTCCACGGATTGCTTTTTTTACTCTTCTTCTTGTTCCAAGTTACCAAAATCATATCCTCTACATTTTCTTGTTAATGTGTCAAACATAGTGCACATTTAATTTTCATGTGAATGCTTTACTACGGTCATGTTACGAGTTCTATAAGAAATGTTCAACCTATCATGTTTCTTGAACATTAATTGTTCCTGGAACTAGGAAGATCAGTTGCTCTTTCAAAATAGGCATCTGTTTATTTAACTACTTATTTAGGTTTCTGCAGTTTGCATGCTTAGAATGTTTGATAACCTAGGATGTGAGGCATCGTGAACTTGTTTGTGATCCTCGTGATTCTGATGGCTCGTTCATATGCTTAACTGCATTTAAAATACAATGTTCAACTCCTGAGTGAGATTTTACAAAGGCTTCCATTGTTTTAATCTTGTTGATTGAGTTTTGCTGTTAAGACTGACGTTGTTTTCTTTCTCAGGAGCTGTAAAAACTGTTAGATGTCGGTGGTTGCAGACGAAGATCTAATAGCCAGTGTTGATGGATGTCGTGTGTGTTATAATTTGCATAATTTAAGTTTAGTTTTGTTCATTTTCCCAACTTTTGCGAGCTGTCTGTTCATCAAAGGCACAAAAAGAAGCCCCTTGCAATCTGTATAATTGCTTATATGCTTGTAAAAGCTGCTAGTTCAATGAAAATATGGGAAAGAATGCAATTGAATTGTATAAACCTTATAAATTTTTTGAATTAGTAAGAACTCTATCACAAAATTTCTGAATTAATGACAACTTTTATCACGACTTCACGAGTATTCTTACTTGTAGAAGCTATCAACACCA

mRNA sequence

AACATTTTTTTATTTTTTATTCCAAATTATTTTCAAAAAAAAAAAAGAGAAAATACTTTTGGATAACATAACCCTGTAAAATCATAGCAGTAGTCTACAGAACCAAGGCAGGAGGAAGAGAAGAGAAAAGATAGAGGCTTGTTTGGGTGACAACAATGGCGACTTCTTCAATTTCTGCTGCACTATTATCTCCCCTCACACTTCGCAATGCATCTTCCTCATCAACCAAACAAGACTTTTCCACCCTCTCTTCTTTAAACCTCAGAAGAACCCTAACTCCTACCTTACAATCGGGACACACCTTATCCAACTCCTCTAATTTCGCAACTTTTGCTGCCCCTGGAGCTTTGGAGGTTCTGGAAACTTCCCCTGATTCATTTGAGGATGGTTCTGAGACTTCAAAAATCAGCATTGCTGCAGACTCTGATCAGATGGCTCCAAAGCAGAAGATACGAATAAAACTGAGATCCTACTGGGTTCCCTTGATAGAGGACTCTTGCAAACAGATAATGGATGCTGCAAGGACAACAAATGCAAAAATCATGGGACCTGTACCATTGCCTACAAAGAAGAGGATATACTGTGTACTCAAGTCACCTCATGTGCACAAGGATGCTCGATTTCACTTTGAGATCCGAACTCATCAACGCCTCATTGACATATTGTACCCAACTGCCCAGACAATCGACTCTTTGATGCAGCTAGATCTCCCTGCAGGTGTAGATGTGGAAGTTAAGCTCTAAAGATCCATCTCGGGAGCTGTAAAAACTGTTAGATGTCGGTGGTTGCAGACGAAGATCTAATAGCCAGTGTTGATGGATGTCGTGTGTGTTATAATTTGCATAATTTAAGTTTAGTTTTGTTCATTTTCCCAACTTTTGCGAGCTGTCTGTTCATCAAAGGCACAAAAAGAAGCCCCTTGCAATCTGTATAATTGCTTATATGCTTGTAAAAGCTGCTAGTTCAATGAAAATATGGGAAAGAATGCAATTGAATTGTATAAACCTTATAAATTTTTTGAATTAGTAAGAACTCTATCACAAAATTTCTGAATTAATGACAACTTTTATCACGACTTCACGAGTATTCTTACTTGTAGAAGCTATCAACACCA

Coding sequence (CDS)

ATGGCGACTTCTTCAATTTCTGCTGCACTATTATCTCCCCTCACACTTCGCAATGCATCTTCCTCATCAACCAAACAAGACTTTTCCACCCTCTCTTCTTTAAACCTCAGAAGAACCCTAACTCCTACCTTACAATCGGGACACACCTTATCCAACTCCTCTAATTTCGCAACTTTTGCTGCCCCTGGAGCTTTGGAGGTTCTGGAAACTTCCCCTGATTCATTTGAGGATGGTTCTGAGACTTCAAAAATCAGCATTGCTGCAGACTCTGATCAGATGGCTCCAAAGCAGAAGATACGAATAAAACTGAGATCCTACTGGGTTCCCTTGATAGAGGACTCTTGCAAACAGATAATGGATGCTGCAAGGACAACAAATGCAAAAATCATGGGACCTGTACCATTGCCTACAAAGAAGAGGATATACTGTGTACTCAAGTCACCTCATGTGCACAAGGATGCTCGATTTCACTTTGAGATCCGAACTCATCAACGCCTCATTGACATATTGTACCCAACTGCCCAGACAATCGACTCTTTGATGCAGCTAGATCTCCCTGCAGGTGTAGATGTGGAAGTTAAGCTCTAA

Protein sequence

MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFAAPGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18169.1Spo18169.1mRNA


Homology
[Close]
BLAST of Spo18169.1 vs. NCBI nr
Match: gi|902233879|gb|KNA23234.1| (hypothetical protein SOVF_026730 [Spinacia oleracea])

HSP 1 Score: 369.8 bits (948), Expect = 3.000e-99
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA
Sbjct: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60

Query: 61  APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD 120
           APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD
Sbjct: 61  APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD 120

Query: 121 AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 180
           AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL
Sbjct: 121 AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 180

Query: 181 MQLDLPAGVDVEVKL 196
           MQLDLPAGVDVEVKL
Sbjct: 181 MQLDLPAGVDVEVKL 195
[Close]
BLAST of Spo18169.1 vs. NCBI nr
Match: gi|731330017|ref|XP_010675901.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 301.6 bits (771), Expect = 1.000e-78
Identity = 168/200 (84.00%), Postives = 176/200 (88.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSS----LNLRRTLTPTLQSGHTLSNSSNF 60
           MATSSISAALLSPLTLRN SS+STK DFSTLS     +NLRRTL+P       LS ++ F
Sbjct: 1   MATSSISAALLSPLTLRNTSSTSTKHDFSTLSLPSSLINLRRTLSP-----FQLSPTTKF 60

Query: 61  ATFAAPGALEVLETSPDSFE-DGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120
            TFAAP ALE  ET P+SFE D SETSK+SIAADSDQMAPKQKIRIKLRSYWVPLIEDSC
Sbjct: 61  TTFAAPEALESQETVPESFEEDASETSKLSIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120

Query: 121 KQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180
           KQIMDAARTTNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDIL+PTAQ
Sbjct: 121 KQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILHPTAQ 180

Query: 181 TIDSLMQLDLPAGVDVEVKL 196
           TIDSLMQLDLPAGVDVEVKL
Sbjct: 181 TIDSLMQLDLPAGVDVEVKL 195
[Close]
BLAST of Spo18169.1 vs. NCBI nr
Match: gi|75274488|sp|Q9M4Y3.1|RR10_MESCR (RecName: Full=30S ribosomal protein S10, chloroplastic; Flags: Precursor)

HSP 1 Score: 269.2 bits (687), Expect = 5.500e-69
Identity = 153/200 (76.50%), Postives = 164/200 (82.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLS---SL-NLRRTLTPTLQSGHTLSNSSNF 60
           MATSS+S  + SPL L N+SS   K   S LS   SL NLRRTL+    S  + S+SSN 
Sbjct: 1   MATSSLSTIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLS---HSSPSSSSSSNV 60

Query: 61  ATFAAPGALEVLETSPDSF-EDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120
             FAAP  LE  ET P+S+ E+GSETS + I ADSDQMAPKQKIRIKLRSYWVPLIEDSC
Sbjct: 61  RVFAAPEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSC 120

Query: 121 KQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180
           KQIMDAARTTNAK MGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ
Sbjct: 121 KQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180

Query: 181 TIDSLMQLDLPAGVDVEVKL 196
           TIDSLMQLDLPAGVDVEVKL
Sbjct: 181 TIDSLMQLDLPAGVDVEVKL 197
[Close]
BLAST of Spo18169.1 vs. NCBI nr
Match: gi|1021581683|ref|XP_016180219.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Arachis ipaensis])

HSP 1 Score: 230.7 bits (587), Expect = 2.200e-57
Identity = 140/211 (66.35%), Postives = 150/211 (71.09%), Query Frame = 1 

		  

Query: 4   SSISAALLSPLTLRNASSS-STKQDFSTL--SSLNLRRTLTPTLQSGHTLSNSSNFATFA 63
           SS+SAALL PL+L  +SSS S+   FS L   S N  +  TP L    T         +A
Sbjct: 5   SSLSAALLPPLSLSTSSSSLSSNLKFSALCFQSGNTFKLRTPKLLHSST-------RVYA 64

Query: 64  APGAL---EVLETSPDSFEDGSE-------------TSKISIAADSDQMAPKQKIRIKLR 123
           AP  L   E L+  P++  D SE             TS ISI  D D MAPKQKIRIKLR
Sbjct: 65  APEVLDSEEPLDVPPETLGDESEATTFQVGDSDTRTTSSISIGGDPDTMAPKQKIRIKLR 124

Query: 124 SYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 183
           SYWVPLIEDSCKQI+DAAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 125 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 184

Query: 184 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 185 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 208
[Close]
BLAST of Spo18169.1 vs. NCBI nr
Match: gi|388497586|gb|AFK36859.1| (unknown [Lotus japonicus])

HSP 1 Score: 230.3 bits (586), Expect = 2.800e-57
Identity = 134/204 (65.69%), Postives = 143/204 (70.10%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MA SS SAA++  L+L N+S        S LS   LR T    L S   L         A
Sbjct: 1   MAVSSFSAAIVPSLSLSNSSPKPKFPSLSFLSGNTLRLTTLKPLHSSTVLK--------A 60

Query: 61  APGALEVLETSPDSFEDGS---------ETSKISIAADSDQMAPKQKIRIKLRSYWVPLI 120
           AP  L+  ET  D  E  +          TS ISI  D+D MAPKQKIRIKLRSYWVPLI
Sbjct: 61  APEVLDSTETLEDDSESSTLQVGDLGTPSTSSISIGGDADAMAPKQKIRIKLRSYWVPLI 120

Query: 121 EDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 180
           EDSCKQI++AAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY
Sbjct: 121 EDSCKQILEAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 180

Query: 181 PTAQTIDSLMQLDLPAGVDVEVKL 196
           PTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 PTAQTIDSLMQLDLPAGVDVEVKL 196
[Close]
BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWE7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026730 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.100e-99
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA
Sbjct: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60

Query: 61  APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD 120
           APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD
Sbjct: 61  APGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMD 120

Query: 121 AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 180
           AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL
Sbjct: 121 AARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSL 180

Query: 181 MQLDLPAGVDVEVKL 196
           MQLDLPAGVDVEVKL
Sbjct: 181 MQLDLPAGVDVEVKL 195
[Close]
BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLK9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g090080 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.900e-79
Identity = 168/200 (84.00%), Postives = 176/200 (88.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSS----LNLRRTLTPTLQSGHTLSNSSNF 60
           MATSSISAALLSPLTLRN SS+STK DFSTLS     +NLRRTL+P       LS ++ F
Sbjct: 1   MATSSISAALLSPLTLRNTSSTSTKHDFSTLSLPSSLINLRRTLSP-----FQLSPTTKF 60

Query: 61  ATFAAPGALEVLETSPDSFE-DGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120
            TFAAP ALE  ET P+SFE D SETSK+SIAADSDQMAPKQKIRIKLRSYWVPLIEDSC
Sbjct: 61  TTFAAPEALESQETVPESFEEDASETSKLSIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120

Query: 121 KQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180
           KQIMDAARTTNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDIL+PTAQ
Sbjct: 121 KQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILHPTAQ 180

Query: 181 TIDSLMQLDLPAGVDVEVKL 196
           TIDSLMQLDLPAGVDVEVKL
Sbjct: 181 TIDSLMQLDLPAGVDVEVKL 195
[Close]
BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Match: I3S9B7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.000e-57
Identity = 134/204 (65.69%), Postives = 143/204 (70.10%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MA SS SAA++  L+L N+S        S LS   LR T    L S   L         A
Sbjct: 1   MAVSSFSAAIVPSLSLSNSSPKPKFPSLSFLSGNTLRLTTLKPLHSSTVLK--------A 60

Query: 61  APGALEVLETSPDSFEDGS---------ETSKISIAADSDQMAPKQKIRIKLRSYWVPLI 120
           AP  L+  ET  D  E  +          TS ISI  D+D MAPKQKIRIKLRSYWVPLI
Sbjct: 61  APEVLDSTETLEDDSESSTLQVGDLGTPSTSSISIGGDADAMAPKQKIRIKLRSYWVPLI 120

Query: 121 EDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 180
           EDSCKQI++AAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY
Sbjct: 121 EDSCKQILEAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILY 180

Query: 181 PTAQTIDSLMQLDLPAGVDVEVKL 196
           PTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 PTAQTIDSLMQLDLPAGVDVEVKL 196
[Close]
BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Match: D7UAE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00140 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.800e-57
Identity = 139/210 (66.19%), Postives = 152/210 (72.38%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLS-----SLNLRRTLTPTLQSGHTLSNSSN 60
           MA +S SAA L P+     SS S K   S+LS     S +  +TL P+L S         
Sbjct: 1   MAITSSSAARLPPMLPTYNSSISHKLRPSSLSLLSNASFSSLKTLKPSLSSSRV------ 60

Query: 61  FATFAAPGALEVLETSPDSFED-------GSET---SKISIAADSDQMAPKQKIRIKLRS 120
              FAAP  L   ET PD  ED       GSET   S +S+  D+D+MAPKQKIRIKLRS
Sbjct: 61  ---FAAPELLSSQET-PDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRS 120

Query: 121 YWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQR 180
           YWVPLIEDSCKQIM+AARTTNAK MGPVPLPTKK+I+CVLKSPHVHKDARFHFEIRTHQR
Sbjct: 121 YWVPLIEDSCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQR 180

Query: 181 LIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           LIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LIDILYPTAQTIDSLMQLDLPAGVDVEVKL 200
[Close]
BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Match: A0A061F401_THECC (Ribosomal protein S10p/S20e family protein isoform 1 OS=Theobroma cacao GN=TCM_030671 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.800e-56
Identity = 135/196 (68.88%), Postives = 148/196 (75.51%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNS-SNFATF 60
           MA SS+S+ L+  LT+ N  S S K  F+ LS  +   +  P   S +TL  S S    F
Sbjct: 65  MAVSSVSSTLIPSLTIPN--SPSPKPKFNLLSPSS-PISFNPLKLSNNTLKLSLSPTKVF 124

Query: 61  AAPGALEVLETSPDSFEDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIM 120
           AAP ALE       S   GS     S++A++D+ APKQKIRIKLRSYWVPLIEDSCKQIM
Sbjct: 125 AAPEALEETPEVGGSEVPGSS----SVSAEADKTAPKQKIRIKLRSYWVPLIEDSCKQIM 184

Query: 121 DAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDS 180
           DAARTTNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDS
Sbjct: 185 DAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDS 244

Query: 181 LMQLDLPAGVDVEVKL 196
           LMQLDLPAGVDVEVKL
Sbjct: 245 LMQLDLPAGVDVEVKL 253
[Close]
BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Match: RR10_MESCR (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.400e-71
Identity = 153/200 (76.50%), Postives = 164/200 (82.00%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLS---SL-NLRRTLTPTLQSGHTLSNSSNF 60
           MATSS+S  + SPL L N+SS   K   S LS   SL NLRRTL+    S  + S+SSN 
Sbjct: 1   MATSSLSTIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLS---HSSPSSSSSSNV 60

Query: 61  ATFAAPGALEVLETSPDSF-EDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSC 120
             FAAP  LE  ET P+S+ E+GSETS + I ADSDQMAPKQKIRIKLRSYWVPLIEDSC
Sbjct: 61  RVFAAPEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSC 120

Query: 121 KQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180
           KQIMDAARTTNAK MGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ
Sbjct: 121 KQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 180

Query: 181 TIDSLMQLDLPAGVDVEVKL 196
           TIDSLMQLDLPAGVDVEVKL
Sbjct: 181 TIDSLMQLDLPAGVDVEVKL 197
[Close]
BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Match: RR10_ARATH (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana GN=RPS10 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.100e-56
Identity = 124/197 (62.94%), Postives = 150/197 (76.14%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MA S++S+ LL    + ++S SST+   S L S +    L+  + +  ++S +     FA
Sbjct: 1   MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLTK---VFA 60

Query: 61  APGALEVLETSPDSFEDGSET--SKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQI 120
            P   + L+ +P+  ++ +    S  SI+ D+D+MAPKQKIRIKLRSYWVPLIEDSCKQI
Sbjct: 61  VP---DTLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQI 120

Query: 121 MDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTID 180
           +DAAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTID
Sbjct: 121 LDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTID 180

Query: 181 SLMQLDLPAGVDVEVKL 196
           SLMQLDLPAGVDVEVKL
Sbjct: 181 SLMQLDLPAGVDVEVKL 191
[Close]
BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Match: RR10_CYAPA (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa GN=rps10 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.800e-32
Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 1 

		  

Query: 98  KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFH 157
           KIRI+LRSY   L+E+SC+QI++AA+ T+A  +GP+PLPTKK+IYCVL+SPHV KD+R H
Sbjct: 8   KIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLRSPHVDKDSREH 67

Query: 158 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           FEIR H+R+ID+  P+++TID+L +LDLPAGVDVEVKL
Sbjct: 68  FEIRVHRRIIDLYLPSSKTIDTLTRLDLPAGVDVEVKL 105
[Close]
BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Match: RS10_CYAP7 (30S ribosomal protein S10 OS=Cyanothece sp. (strain PCC 7424) GN=rpsJ PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.000e-32
Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 1 

		  

Query: 96  KQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDAR 155
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK+R+YCVL+SPHV KD+R
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRRVYCVLRSPHVDKDSR 65

Query: 156 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            HFE RTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105
[Close]
BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Match: RR10_PORPU (30S ribosomal protein S10, chloroplastic OS=Porphyra purpurea GN=rps10 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.100e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = 1 

		  

Query: 98  KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFH 157
           KIRIKL++Y   L+  SCK+I+D A  TNA  +GP+PLPTK+RIYCVL+SPHV KD+R H
Sbjct: 8   KIRIKLKAYNSSLLNTSCKKIVDTAERTNAIAVGPIPLPTKRRIYCVLRSPHVDKDSREH 67

Query: 158 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           FEIR+H+R+IDI  P++QTID+LM+L+LP+GVD+EVKL
Sbjct: 68  FEIRSHRRIIDIHQPSSQTIDALMKLNLPSGVDIEVKL 105
[Close]
BLAST of Spo18169.1 vs. TAIR (Arabidopsis)
Match: AT3G13120.1 (Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 219.5 bits (558), Expect = 1.800e-57
Identity = 124/197 (62.94%), Postives = 150/197 (76.14%), Query Frame = 1 

		  

Query: 1   MATSSISAALLSPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATFA 60
           MA S++S+ LL    + ++S SST+   S L S +    L+  + +  ++S +     FA
Sbjct: 1   MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLTK---VFA 60

Query: 61  APGALEVLETSPDSFEDGSET--SKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQI 120
            P   + L+ +P+  ++ +    S  SI+ D+D+MAPKQKIRIKLRSYWVPLIEDSCKQI
Sbjct: 61  VP---DTLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQI 120

Query: 121 MDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTID 180
           +DAAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTID
Sbjct: 121 LDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTID 180

Query: 181 SLMQLDLPAGVDVEVKL 196
           SLMQLDLPAGVDVEVKL
Sbjct: 181 SLMQLDLPAGVDVEVKL 191
[Close]
BLAST of Spo18169.1 vs. TAIR (Arabidopsis)
Match: AT3G45030.1 (Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.100e-6
Identity = 31/99 (31.31%), Postives = 51/99 (51.52%), Query Frame = 1 

		  

Query: 98  KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARF- 157
           KIRI L S  V  +E  C  ++  A+    ++ GPV +PTK       K+P       + 
Sbjct: 24  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83

Query: 158 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 84  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
[Close]
BLAST of Spo18169.1 vs. TAIR (Arabidopsis)
Match: AT5G62300.1 (Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.100e-6
Identity = 31/99 (31.31%), Postives = 51/99 (51.52%), Query Frame = 1 

		  

Query: 98  KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARF- 157
           KIRI L S  V  +E  C  ++  A+    ++ GPV +PTK       K+P       + 
Sbjct: 24  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83

Query: 158 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 84  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
[Close]
BLAST of Spo18169.1 vs. TAIR (Arabidopsis)
Match: AT3G47370.2 (Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-6
Identity = 34/115 (29.57%), Postives = 58/115 (50.43%), Query Frame = 1 

		  

Query: 82  SKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRI 141
           +K  + A  +Q+    KIRI L S  V  +E  C  ++  A+    ++ GPV +PTK   
Sbjct: 9   TKAGLEAPLEQI---HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLK 68

Query: 142 YCVLKSPHVHKDARF-HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
               K+P       +  FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 69  ITTRKAPCGEGTNTWDRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
The following BLAST results are available for this feature:
BLAST of Spo18169.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902233879|gb|KNA23234.1|3.0e-99100.hypothetical protein SOVF_0267... [more]
gi|731330017|ref|XP_010675901.1|1.0e-7884.0PREDICTED: 30S ribosomal prote... [more]
gi|75274488|sp|Q9M4Y3.1|RR10_MESCR5.5e-6976.5RecName: Full=30S ribosomal pr... [more]
gi|1021581683|ref|XP_016180219.1|2.2e-5766.3PREDICTED: 30S ribosomal prote... [more]
gi|388497586|gb|AFK36859.1|2.8e-5765.6unknown [Lotus japonicus][more]
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BLAST of Spo18169.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWE7_SPIOL2.1e-99100.Uncharacterized protein OS=Spi... [more]
A0A0J8CLK9_BETVU6.9e-7984.0Uncharacterized protein OS=Bet... [more]
I3S9B7_LOTJA2.0e-5765.6Uncharacterized protein OS=Lot... [more]
D7UAE2_VITVI9.8e-5766.1Putative uncharacterized prote... [more]
A0A061F401_THECC2.8e-5668.8Ribosomal protein S10p/S20e fa... [more]
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BLAST of Spo18169.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RR10_MESCR3.4e-7176.530S ribosomal protein S10, chl... [more]
RR10_ARATH3.1e-5662.930S ribosomal protein S10, chl... [more]
RR10_CYAPA1.8e-3266.3Cyanelle 30S ribosomal protein... [more]
RS10_CYAP77.0e-3262.030S ribosomal protein S10 OS=C... [more]
RR10_PORPU9.1e-3265.330S ribosomal protein S10, chl... [more]
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BLAST of Spo18169.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G13120.11.8e-5762.9Ribosomal protein S10p/S20e fa... [more]
AT3G45030.11.1e-631.3Ribosomal protein S10p/S20e fa... [more]
AT5G62300.11.1e-631.3Ribosomal protein S10p/S20e fa... [more]
AT3G47370.21.4e-629.5Ribosomal protein S10p/S20e fa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 98..111
score: 5.7E-15coord: 154..168
score: 5.7E-15coord: 133..148
score: 5.7
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 96..195
score: 24
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 1..195
score: 8.7
IPR001848Ribosomal protein S10TIGRFAMsTIGR01049TIGR01049coord: 97..194
score: 3.4
IPR018268Ribosomal protein S10, conserved sitePROSITEPS00361RIBOSOMAL_S10coord: 122..137
scor
IPR027486Ribosomal protein S10 domainGENE3D3.30.70.600coord: 97..195
score: 3.2
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 100..194
score: 4.1
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 100..194
score: 5.0
IPR027486Ribosomal protein S10 domainunknownSSF54999Ribosomal protein S10coord: 98..195
score: 3.66
NoneNo IPR availablePANTHERPTHR11700:SF937S RIBOSOMAL PROTEIN S10, MITOCHONDRIALcoord: 1..195
score: 8.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042793 plastid transcription
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009658 chloroplast organization
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0070084 protein initiator methionine removal
biological_process GO:0006508 proteolysis
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0051301 cell division
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009657 plastid organization
biological_process GO:0016556 mRNA modification
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0051607 defense response to virus
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0048481 plant ovule development
biological_process GO:0030091 protein repair
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0009631 cold acclimation
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0042742 defense response to bacterium
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006546 glycine catabolic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042545 cell wall modification
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0015979 photosynthesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016310 phosphorylation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0015031 protein transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006766 vitamin metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0009295 nucleoid
cellular_component GO:0009536 plastid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0019031 viral envelope
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0000311 plastid large ribosomal subunit
cellular_component GO:0009507 chloroplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0019136 deoxynucleoside kinase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0070181 small ribosomal subunit rRNA binding
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0070191 methionine-R-sulfoxide reductase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0070006 metalloaminopeptidase activity
RNA-Seq Expression