Spo18276 (gene) | SpinachBase

Overview


Name	Spo18276
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial import inner membrane translocase subunit tim23, putative
Location	chr4 : 122823447 .. 122825769 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATGTTAGTAGGAACCTTATTAAACCTGCTCATGACCTTGCTAATATAGCAAGAAAACATGGGATGGTCGATGTTGTATAGTTTTGTGTGTTTACTTTTGTTGTCAAAAAAAAAAAAAACTATGACCAAAAAAATATTACTTCGCATAAAAGTACATATTTACAACTGCAAGCACATAACTAGGAAGAAAAGCACATGTTCAATTGGAAAAGGAAATCAACACAAAATAGGACAAAATCTAATTACTGGTGATAAACACTACGTCTGCCATTGATTAAGATGCATGACTGTTCTTGGGTGTAAAGAAAACCCATAAAATTCCAATTAATAATAGATAAAATTAACAAAAACTGTCAAAATAAATAAAATAAATTAACAATTAAATTACACATGAAAATAACATCAATACACACTTACTTGAATAAATGAAGATTAACACATACGAAATTTACGAATTTGAGCAACTGTGTCGCCTAATTTGCGATTTTTGGAGATGAAGATGTTCTTTATTTTGGTTTTCCCCTTTTGACGACATCAACGAGGATTCTAATTGATTCTCTAAATCTTTTCCTTTTTCTATTGACTTTTTATTTGGCAGTTTTTTAAATTTAAAAATTCTATCCTAATAACTGCCAAAAGATACCAAAATACCCGGAAAGTAATTTTGTGTTATTAATAATTTTTGTTTGGGTCTATAGATCTGTTGTAGCCGTGACAAATATGATTTCCGTCTAATTCGTCCGATTGTAGTTGAAAGATTGATATCCTCTTCGATCCCGCATAAATCTTTACCAAAGAAACAAGCTGAACTAAACTAAACACACAAAACTTAACTAAAAACAAACCCACCATAAGGGTACTTACTACACCGAAACAGTCAAACCCACCATAGGGTACTTACCACACTGAAACTATGTAATTTTATTGAGATCTAACGCAAAAACACAACAAAATTGAAAGAGAAGGGGCGGAAATAACCAAATTTCCGAAGAAAATTGGCTATTTCCGCCCTAGAAAACCCTAATTTTTGTAAACTCTAAAAAGAGAGAGAAAAGAGGGAGAGAGATATGAGTTAGAAAACCTACGAACGGAGTATGTGATTATAAACACATAACACGGATTGTTTTTTAATTTTAACATTGTTCTTGTTTACTCCCTCCGTCCCTTAATACTCGCACCGTTTCTACTTGACACGCTTGCCAATGCACAACTTTGACCACCAATATCTTTAACTACATATTATAAAAACTTGTAAAAATATTAATATTTTGAAAATATATATTAAGATGAAGCTAATAATATATTATATACTAACATTTATTTTCATATACTAAAAATAAATTAGGGCAAAAGTGAATTATGTGAATAGTGCAAAAAGGCAAAACGGTGCGAGTATTAAGGGACAGAGGGAGTATACCATTGTTCTTTTGTGATACCATTATTTTTAACCAAACGGGCAAACGAAACTTTAATTTTCCGTATACAAATATCCAGTGTATTCATTTAACACGGATTTAATAGAGTTGTTTAAATGTGTATTGCAAGTTGTAAGGCGGTGTTGAGGGTTAAGTAGTCTCCGCATTCTCGAAAAACTTCCGACTCGGACGCCTCTTCTCTCTCTCTCTCCTCCCCTTTCCAACCAAAATCAGAAAACTCCGAGGGTTGCCAAAGAAGAATCTTCCCCATCGGAAATCCCTCTAACCCTAACCCTAACCCTAATCCTAAAATCTGTCAATCGAACCTCGAAAATTTCACAAATATGTCGTTCAATCAACCAAAAGAGGACGAGAATAATGAGAATCGTCGTCTCTACAATCCGTACAAAGACTTAGAAATCCAGGCCCAGAAGCTCTATCAGCTTCCCACCCAACCCGAATTCCTTTTCCATGAAGAATCCGTCCGACAAAGCAGATCTTGGGGTGAGAATCTCACCTACTACACCGGTTGTGGCTATCTGGCCGGAGCTTCCACCGGCGCCGCCAAGGGACTCGTCGACGCTATCCGTACTTCAGAACACGGTGATACCATGAAACTCCGTGTTAATCGTGTCCTGAACTCTTCCGGCCTCACCGGTCGCCAGTGGGGAAACCGCGCTGGAGTCATAGGTCTCATGTATGCTGGTCTCGAGAGTGGGCTCGTTAAGTTGAGGGATACTGATGATGTCATCAATAGTGTGGTTGCTGGGCTTGCAACCGGGGCTCTCTTTAAGGCGGCTTCGGGTCCTCGGGCTGCTGCCATTGCTGGTGCCGCTGGCGGCCTACTTGTTGGATGTACGGTTGGGATGAAGCACGCGCTCAAGAGATACATCCCAGTCTGA

mRNA sequence

ATGTCTCCGCATTCTCGAAAAACTTCCGACTCGGACGCCTCTTCTCTCTCTCTCTCCTCCCCTTTCCAACCAAAATCAGAAAACTCCGAGGGTTGCCAAAGAAGAATCTTCCCCATCGGAAATCCCTCTAACCCTAACCCTAACCCTAATCCTAAAATCTGTCAATCGAACCTCGAAAATTTCACAAATATGTCGTTCAATCAACCAAAAGAGGACGAGAATAATGAGAATCGTCGTCTCTACAATCCGTACAAAGACTTAGAAATCCAGGCCCAGAAGCTCTATCAGCTTCCCACCCAACCCGAATTCCTTTTCCATGAAGAATCCGTCCGACAAAGCAGATCTTGGGGTGAGAATCTCACCTACTACACCGGTTGTGGCTATCTGGCCGGAGCTTCCACCGGCGCCGCCAAGGGACTCGTCGACGCTATCCGTACTTCAGAACACGGTGATACCATGAAACTCCGTGTTAATCGTGTCCTGAACTCTTCCGGCCTCACCGGTCGCCAGTGGGGAAACCGCGCTGGAGTCATAGGTCTCATGTATGCTGGTCTCGAGAGTGGGCTCGTTAAGTTGAGGGATACTGATGATGTCATCAATAGTGTGGTTGCTGGGCTTGCAACCGGGGCTCTCTTTAAGGCGGCTTCGGGTCCTCGGGCTGCTGCCATTGCTGGTGCCGCTGGCGGCCTACTTGTTGGATGTACGGTTGGGATGAAGCACGCGCTCAAGAGATACATCCCAGTCTGA

Coding sequence (CDS)

ATGTCTCCGCATTCTCGAAAAACTTCCGACTCGGACGCCTCTTCTCTCTCTCTCTCCTCCCCTTTCCAACCAAAATCAGAAAACTCCGAGGGTTGCCAAAGAAGAATCTTCCCCATCGGAAATCCCTCTAACCCTAACCCTAACCCTAATCCTAAAATCTGTCAATCGAACCTCGAAAATTTCACAAATATGTCGTTCAATCAACCAAAAGAGGACGAGAATAATGAGAATCGTCGTCTCTACAATCCGTACAAAGACTTAGAAATCCAGGCCCAGAAGCTCTATCAGCTTCCCACCCAACCCGAATTCCTTTTCCATGAAGAATCCGTCCGACAAAGCAGATCTTGGGGTGAGAATCTCACCTACTACACCGGTTGTGGCTATCTGGCCGGAGCTTCCACCGGCGCCGCCAAGGGACTCGTCGACGCTATCCGTACTTCAGAACACGGTGATACCATGAAACTCCGTGTTAATCGTGTCCTGAACTCTTCCGGCCTCACCGGTCGCCAGTGGGGAAACCGCGCTGGAGTCATAGGTCTCATGTATGCTGGTCTCGAGAGTGGGCTCGTTAAGTTGAGGGATACTGATGATGTCATCAATAGTGTGGTTGCTGGGCTTGCAACCGGGGCTCTCTTTAAGGCGGCTTCGGGTCCTCGGGCTGCTGCCATTGCTGGTGCCGCTGGCGGCCTACTTGTTGGATGTACGGTTGGGATGAAGCACGCGCTCAAGAGATACATCCCAGTCTGA

Protein sequence

MSPHSRKTSDSDASSLSLSSPFQPKSENSEGCQRRIFPIGNPSNPNPNPNPKICQSNLENFTNMSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKRYIPV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18276.1	Spo18276.1	mRNA

Homology

[Close]

BLAST of Spo18276.1 vs. NCBI nr
Match: gi|902036307|gb|KNA02639.1| (hypothetical protein SOVF_216800 [Spinacia oleracea])

HSP 1 Score: 362.8 bits (930), Expect = 4.600e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 123
           MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY
Sbjct: 1   MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 60

Query: 124 TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 183
           TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA
Sbjct: 61  TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 120

Query: 184 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 243
           GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK
Sbjct: 121 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 180

Query: 244 RYIPV 249
           RYIPV
Sbjct: 181 RYIPV 185

[Close]

BLAST of Spo18276.1 vs. NCBI nr
Match: gi|731373774|ref|XP_010666746.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 298.5 bits (763), Expect = 1.100e-77
Identity = 148/185 (80.00%), Postives = 168/185 (90.81%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 123
           M+FNQP++D ++E RRLYNPY+DLE   QKLYQLPTQPE+LFHEES+RQ RSWGENLTYY
Sbjct: 1   MAFNQPEKDGDHE-RRLYNPYQDLETPVQKLYQLPTQPEYLFHEESLRQRRSWGENLTYY 60

Query: 124 TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 183
           TGCGYLAGAS+GAAKGL DA+   EHGDT+KLRVNRVLN+SGLTGRQWGNRAGVI LMYA
Sbjct: 61  TGCGYLAGASSGAAKGLFDALHAFEHGDTLKLRVNRVLNTSGLTGRQWGNRAGVIALMYA 120

Query: 184 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 243
           G ++G+V  RDTDDV NSV +GLATGA++KAASGPRAAA+AGA GGLLVGCTVG+KHALK
Sbjct: 121 GFDTGIVWWRDTDDVYNSVASGLATGAIYKAASGPRAAAVAGAIGGLLVGCTVGIKHALK 180

Query: 244 RYIPV 249
           RYIPV
Sbjct: 181 RYIPV 184

[Close]

BLAST of Spo18276.1 vs. NCBI nr
Match: gi|731401986|ref|XP_002278010.2| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Vitis vinifera])

HSP 1 Score: 255.8 bits (652), Expect = 8.000e-65
Identity = 128/191 (67.02%), Postives = 159/191 (83.25%), Query Frame = 1

		  
Query: 58  LENFTNMSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWG 117
           LE+F +M  +Q     +N+NRRLYNPY+DL+I  Q +Y+LPT PEFLF EESV Q RSWG
Sbjct: 49  LESFIHM--DQRTSQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWG 108

Query: 118 ENLTYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGV 177
           ENLTYYTG GYL+GA +GAAKGLVD ++ SE GDT+KLR+NR+LN+SG  GR++GNRAGV
Sbjct: 109 ENLTYYTGIGYLSGALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGV 168

Query: 178 IGLMYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVG 237
           IGLMYAGLESG+V +RDTDDV+NSVVAGL TGAL++AA+G R+AA+AGA GG++VG  V 
Sbjct: 169 IGLMYAGLESGIVAVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVT 228

Query: 238 MKHALKRYIPV 249
            K  LKRY+P+
Sbjct: 229 AKQVLKRYVPI 237

[Close]

BLAST of Spo18276.1 vs. NCBI nr
Match: gi|720036810|ref|XP_010267477.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2-like [Nelumbo nucifera])

HSP 1 Score: 252.3 bits (643), Expect = 8.800e-64
Identity = 122/170 (71.76%), Postives = 144/170 (84.71%), Query Frame = 1

		  
Query: 79  RLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYTGCGYLAGASTGAAK 138
           RLYNPY+DL++  Q LY+LPT PEFLF EE+V Q R+WGENLTYYTGCGYLAGA  GA K
Sbjct: 15  RLYNPYQDLQLPIQTLYKLPTSPEFLFQEEAVAQRRTWGENLTYYTGCGYLAGAIAGAGK 74

Query: 139 GLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAGLESGLVKLRDTDDV 198
           G VD ++ SE GDT+KLR+NRVLN+SG +GR+ GNR GVIGL+YAGLESG+V +RDTDDV
Sbjct: 75  GFVDGVKASEEGDTLKLRINRVLNASGHSGRKLGNRVGVIGLLYAGLESGIVAVRDTDDV 134

Query: 199 INSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKRYIPV 249
           INSV+AGL TGALFKAASGPR+AA+AGA GGL+VG  V  K  LKRY+P+
Sbjct: 135 INSVLAGLGTGALFKAASGPRSAAVAGAIGGLMVGAAVAGKQVLKRYVPI 184

[Close]

BLAST of Spo18276.1 vs. NCBI nr
Match: gi|901826567|gb|KMZ75935.1| (Mitochondrial import inner membrane translocase subunit tim23 [Zostera marina])

HSP 1 Score: 251.9 bits (642), Expect = 1.200e-63
Identity = 130/194 (67.01%), Postives = 153/194 (78.87%), Query Frame = 1

		  
Query: 58  LENFTNMSFNQPKEDENNENR---RLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSR 117
           +E+  N   N+  E  NN +R   RLYNPY+DL+I  QK+Y +PT PEFLF EESV Q R
Sbjct: 2   VESGANFYGNKDSETGNNTSRVTGRLYNPYQDLQIPYQKIYNIPTSPEFLFQEESVAQRR 61

Query: 118 SWGENLTYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNR 177
           +WGENLTYYTGCGYL GA +GA KGLV+A+R +E GDT KLRVNRVLNSSG  GR+ GNR
Sbjct: 62  AWGENLTYYTGCGYLVGAVSGAGKGLVEAVRATEPGDTFKLRVNRVLNSSGQAGRRVGNR 121

Query: 178 AGVIGLMYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGC 237
            GVIGLMYAG+ES LV +RDTDD++NSVVAGL TG LFKAASGPR+AAIAGA GGL+VG 
Sbjct: 122 CGVIGLMYAGIESALVTVRDTDDLLNSVVAGLGTGVLFKAASGPRSAAIAGAIGGLMVGV 181

Query: 238 TVGMKHALKRYIPV 249
            V  K  +KRY+P+
Sbjct: 182 AVAGKQVVKRYVPI 195

[Close]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6J5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_216800 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.200e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 123
           MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY
Sbjct: 1   MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 60

Query: 124 TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 183
           TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA
Sbjct: 61  TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 120

Query: 184 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 243
           GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK
Sbjct: 121 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 180

Query: 244 RYIPV 249
           RYIPV
Sbjct: 181 RYIPV 185

[Close]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DYD3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004230 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.500e-78
Identity = 148/185 (80.00%), Postives = 168/185 (90.81%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYY 123
           M+FNQP++D ++E RRLYNPY+DLE   QKLYQLPTQPE+LFHEES+RQ RSWGENLTYY
Sbjct: 1   MAFNQPEKDGDHE-RRLYNPYQDLETPVQKLYQLPTQPEYLFHEESLRQRRSWGENLTYY 60

Query: 124 TGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYA 183
           TGCGYLAGAS+GAAKGL DA+   EHGDT+KLRVNRVLN+SGLTGRQWGNRAGVI LMYA
Sbjct: 61  TGCGYLAGASSGAAKGLFDALHAFEHGDTLKLRVNRVLNTSGLTGRQWGNRAGVIALMYA 120

Query: 184 GLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALK 243
           G ++G+V  RDTDDV NSV +GLATGA++KAASGPRAAA+AGA GGLLVGCTVG+KHALK
Sbjct: 121 GFDTGIVWWRDTDDVYNSVASGLATGAIYKAASGPRAAAVAGAIGGLLVGCTVGIKHALK 180

Query: 244 RYIPV 249
           RYIPV
Sbjct: 181 RYIPV 184

[Close]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Match: F6HXZ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g01810 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.600e-64
Identity = 124/182 (68.13%), Postives = 153/182 (84.07%), Query Frame = 1

		  
Query: 67  NQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYTGC 126
           +Q     +N+NRRLYNPY+DL+I  Q +Y+LPT PEFLF EESV Q RSWGENLTYYTG 
Sbjct: 2   DQRTSQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWGENLTYYTGI 61

Query: 127 GYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAGLE 186
           GYL+GA +GAAKGLVD ++ SE GDT+KLR+NR+LN+SG  GR++GNRAGVIGLMYAGLE
Sbjct: 62  GYLSGALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGVIGLMYAGLE 121

Query: 187 SGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKRYI 246
           SG+V +RDTDDV+NSVVAGL TGAL++AA+G R+AA+AGA GG++VG  V  K  LKRY+
Sbjct: 122 SGIVAVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVTAKQVLKRYV 181

Query: 247 PV 249
           P+
Sbjct: 182 PI 183

[Close]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q5U7_ZOSMR (Mitochondrial import inner membrane translocase subunit tim23 OS=Zostera marina GN=ZOSMA_109G00260 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.000e-64
Identity = 130/194 (67.01%), Postives = 153/194 (78.87%), Query Frame = 1

		  
Query: 58  LENFTNMSFNQPKEDENNENR---RLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSR 117
           +E+  N   N+  E  NN +R   RLYNPY+DL+I  QK+Y +PT PEFLF EESV Q R
Sbjct: 2   VESGANFYGNKDSETGNNTSRVTGRLYNPYQDLQIPYQKIYNIPTSPEFLFQEESVAQRR 61

Query: 118 SWGENLTYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNR 177
           +WGENLTYYTGCGYL GA +GA KGLV+A+R +E GDT KLRVNRVLNSSG  GR+ GNR
Sbjct: 62  AWGENLTYYTGCGYLVGAVSGAGKGLVEAVRATEPGDTFKLRVNRVLNSSGQAGRRVGNR 121

Query: 178 AGVIGLMYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGC 237
            GVIGLMYAG+ES LV +RDTDD++NSVVAGL TG LFKAASGPR+AAIAGA GGL+VG 
Sbjct: 122 CGVIGLMYAGIESALVTVRDTDDLLNSVVAGLGTGVLFKAASGPRSAAIAGAIGGLMVGV 181

Query: 238 TVGMKHALKRYIPV 249
            V  K  +KRY+P+
Sbjct: 182 AVAGKQVVKRYVPI 195

[Close]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Match: A0A118JVF2_CYNCS (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Cynara cardunculus var. scolymus GN=Ccrd_005024 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.000e-63
Identity = 124/184 (67.39%), Postives = 149/184 (80.98%), Query Frame = 1

		  
Query: 65  SFNQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYT 124
           S N  + D++  NRRLYNPY+DL +  Q LY+LPT PE+LF EESV Q RSWGENLTYYT
Sbjct: 7   SSNHNETDDDRHNRRLYNPYQDLGVPVQTLYKLPTSPEYLFQEESVAQRRSWGENLTYYT 66

Query: 125 GCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAG 184
           G GYL GA  GA KGLV+ ++ SE GDTMKLRVNR+LN+SG  GR+ GNRAGVIGL+YAG
Sbjct: 67  GIGYLGGAVVGAGKGLVEGVKASEAGDTMKLRVNRILNASGHAGRKIGNRAGVIGLLYAG 126

Query: 185 LESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKR 244
           +ESG+V +RDTDD+INSVVAGL TGAL+KAA+GPR+AA+AGA GG+ VG  V  K  LKR
Sbjct: 127 MESGMVAVRDTDDIINSVVAGLGTGALYKAAAGPRSAAVAGAIGGIAVGLAVTGKQVLKR 186

Query: 245 YIPV 249
           Y+P+
Sbjct: 187 YVPI 190

[Close]

BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.700e-54
Identity = 106/184 (57.61%), Postives = 141/184 (76.63%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLE--IQAQKLYQLPTQPEFLFHEESVRQSRSWGENLT 123
           M+ N+  + E++EN RLY+PY++ +  I++Q LY+LPT PEFLF EES++Q RSWGENLT
Sbjct: 1   MAINRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLT 60

Query: 124 YYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLM 183
           +YTG GYLAG+  GA+ G+   I++ E+GDT KL++NR+LNSSG  GR WGNR G++GL+
Sbjct: 61  FYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLI 120

Query: 184 YAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHA 243
           YAG+ESG+V + D DDV  SVVAGL TGA+F+AA G R+AA+AGA GG+  G  V  K  
Sbjct: 121 YAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQV 180

Query: 244 LKRY 246
            KRY
Sbjct: 181 FKRY 184

[Close]

BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.300e-54
Identity = 106/188 (56.38%), Postives = 140/188 (74.47%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEI---QAQKLYQLPTQPEFLFHEESVRQSRSWGENL 123
           M+ N   +  ++EN RLYNPY++ E+   ++Q LY+LPT PEFLF EE++RQ RSWGENL
Sbjct: 1   MAANNRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENL 60

Query: 124 TYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGL 183
           T+YTG  YL G+  GA+ G++  +++ E GDT KL++NR+LNSSG TGR WGNR G+IGL
Sbjct: 61  TFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGL 120

Query: 184 MYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKH 243
           +YAG+ESG+V   D DDV  SVVAGL TGA+ +AA G R+AA+AGA GGL  G  V  K 
Sbjct: 121 VYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQ 180

Query: 244 ALKRYIPV 249
            +KRY+P+
Sbjct: 181 IVKRYVPI 188

[Close]

BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.000e-43
Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 1

		  
Query: 67  NQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYTGC 126
           N     +  +  R YNPY+ + +  +KLY+LPT PEFLF EE+ ++  +WGENLT++TG 
Sbjct: 6   NHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGW 65

Query: 127 GYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAGLE 186
           GY  G+  GA KG +  +R +E G+++K+R NR+LNS GL  R+ GN  G +GLM+A +E
Sbjct: 66  GYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAME 125

Query: 187 SGLVKLRDTDD-VINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKRY 246
           SG+  +RD DD  + +V+AGLATG L++AASGPR+A +AGA GG+     V  +  +KR+
Sbjct: 126 SGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRF 185

Query: 247 IPV 249
           +P+
Sbjct: 186 VPI 188

[Close]

BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
Match: TIM23_YEAST (Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM23 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.900e-10
Identity = 45/126 (35.71%), Postives = 62/126 (49.21%), Query Frame = 1

		  
Query: 113 SRSWGENLTYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWG 172
           SR W ++L Y TG  YL G   G   G++  ++        KL++N VLN     G   G
Sbjct: 90  SRGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLG 149

Query: 173 NRAGVIGLMYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASG--PRAAAIAGAAGGL 232
           N AG++ L Y  + S +  LR   D   S+ AG  TGALFK++ G  P   + A  A   
Sbjct: 150 NNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSSAMVAAAC 209

Query: 233 LVGCTV 237
            V C+V
Sbjct: 210 AVWCSV 215

[Close]

BLAST of Spo18276.1 vs. TAIR (Arabidopsis)
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23)

HSP 1 Score: 214.2 bits (544), Expect = 9.400e-56
Identity = 106/184 (57.61%), Postives = 141/184 (76.63%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLE--IQAQKLYQLPTQPEFLFHEESVRQSRSWGENLT 123
           M+ N+  + E++EN RLY+PY++ +  I++Q LY+LPT PEFLF EES++Q RSWGENLT
Sbjct: 1   MAINRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLT 60

Query: 124 YYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLM 183
           +YTG GYLAG+  GA+ G+   I++ E+GDT KL++NR+LNSSG  GR WGNR G++GL+
Sbjct: 61  FYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLI 120

Query: 184 YAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHA 243
           YAG+ESG+V + D DDV  SVVAGL TGA+F+AA G R+AA+AGA GG+  G  V  K  
Sbjct: 121 YAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQV 180

Query: 244 LKRY 246
            KRY
Sbjct: 181 FKRY 184

[Close]

BLAST of Spo18276.1 vs. TAIR (Arabidopsis)
Match: AT1G72750.1 (translocase inner membrane subunit 23-2)

HSP 1 Score: 212.2 bits (539), Expect = 3.600e-55
Identity = 106/188 (56.38%), Postives = 140/188 (74.47%), Query Frame = 1

		  
Query: 64  MSFNQPKEDENNENRRLYNPYKDLEI---QAQKLYQLPTQPEFLFHEESVRQSRSWGENL 123
           M+ N   +  ++EN RLYNPY++ E+   ++Q LY+LPT PEFLF EE++RQ RSWGENL
Sbjct: 1   MAANNRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENL 60

Query: 124 TYYTGCGYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGL 183
           T+YTG  YL G+  GA+ G++  +++ E GDT KL++NR+LNSSG TGR WGNR G+IGL
Sbjct: 61  TFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGL 120

Query: 184 MYAGLESGLVKLRDTDDVINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKH 243
           +YAG+ESG+V   D DDV  SVVAGL TGA+ +AA G R+AA+AGA GGL  G  V  K 
Sbjct: 121 VYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQ 180

Query: 244 ALKRYIPV 249
            +KRY+P+
Sbjct: 181 IVKRYVPI 188

[Close]

BLAST of Spo18276.1 vs. TAIR (Arabidopsis)
Match: AT3G04800.1 (translocase inner membrane subunit 23-3)

HSP 1 Score: 176.0 bits (445), Expect = 2.800e-44
Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 1

		  
Query: 67  NQPKEDENNENRRLYNPYKDLEIQAQKLYQLPTQPEFLFHEESVRQSRSWGENLTYYTGC 126
           N     +  +  R YNPY+ + +  +KLY+LPT PEFLF EE+ ++  +WGENLT++TG 
Sbjct: 6   NHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGW 65

Query: 127 GYLAGASTGAAKGLVDAIRTSEHGDTMKLRVNRVLNSSGLTGRQWGNRAGVIGLMYAGLE 186
           GY  G+  GA KG +  +R +E G+++K+R NR+LNS GL  R+ GN  G +GLM+A +E
Sbjct: 66  GYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAME 125

Query: 187 SGLVKLRDTDD-VINSVVAGLATGALFKAASGPRAAAIAGAAGGLLVGCTVGMKHALKRY 246
           SG+  +RD DD  + +V+AGLATG L++AASGPR+A +AGA GG+     V  +  +KR+
Sbjct: 126 SGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRF 185

Query: 247 IPV 249
           +P+
Sbjct: 186 VPI 188

The following BLAST results are available for this feature:

BLAST of Spo18276.1 vs. NCBI nr
BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
BLAST of Spo18276.1 vs. TAIR (Arabidopsis)

BLAST of Spo18276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902036307\|gb\|KNA02639.1\|	4.6e-97	100.	hypothetical protein SOVF_2168...	[more]
gi\|731373774\|ref\|XP_010666746.1\|	1.1e-77	80.0	PREDICTED: mitochondrial impor...	[more]
gi\|731401986\|ref\|XP_002278010.2\|	8.0e-65	67.0	PREDICTED: mitochondrial impor...	[more]
gi\|720036810\|ref\|XP_010267477.1\|	8.8e-64	71.7	PREDICTED: mitochondrial impor...	[more]
gi\|901826567\|gb\|KMZ75935.1\|	1.2e-63	67.0	Mitochondrial import inner mem...	[more]

BLAST of Spo18276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9Q6J5_SPIOL	3.2e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8DYD3_BETVU	7.5e-78	80.0	Uncharacterized protein OS=Bet...	[more]
F6HXZ8_VITVI	3.6e-64	68.1	Putative uncharacterized prote...	[more]
A0A0K9Q5U7_ZOSMR	8.0e-64	67.0	Mitochondrial import inner mem...	[more]
A0A118JVF2_CYNCS	3.0e-63	67.3	Mitochondrial inner membrane t...	[more]

BLAST of Spo18276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
TI231_ARATH	1.7e-54	57.6	Mitochondrial import inner mem...	[more]
TI232_ARATH	6.3e-54	56.3	Mitochondrial import inner mem...	[more]
TI233_ARATH	5.0e-43	46.4	Mitochondrial import inner mem...	[more]
TIM23_YEAST	1.9e-10	35.7	Mitochondrial import inner mem...	[more]

BLAST of Spo18276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G17530.1	9.4e-56	57.6	translocase of inner mitochond...	[more]
AT1G72750.1	3.6e-55	56.3	translocase inner membrane sub...	[more]
AT3G04800.1	2.8e-44	46.4	translocase inner membrane sub...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	PFAM	PF02466	Tim17	coord: 121..231 score: 2.1
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 52..248 score: 2.8
None	No IPR available	PANTHER	PTHR15371:SF7	SUBFAMILY NOT NAMED	coord: 52..248 score: 2.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:0010091	trichome branching
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0007076	mitotic chromosome condensation
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0006810	transport
biological_process	GO:0051604	protein maturation
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0008283	cell proliferation
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006260	DNA replication
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010077	maintenance of inflorescence meristem identity
biological_process	GO:0048444	floral organ morphogenesis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0048825	cotyledon development
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009657	plastid organization
biological_process	GO:0006412	translation
biological_process	GO:0016572	histone phosphorylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0000280	nuclear division
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0045010	actin nucleation
biological_process	GO:0006281	DNA repair
biological_process	GO:0034654	nucleobase-containing compound biosynthetic process
biological_process	GO:0006996	organelle organization
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0042127	regulation of cell proliferation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0009553	embryo sac development
biological_process	GO:0006424	glutamyl-tRNA aminoacylation
biological_process	GO:0006425	glutaminyl-tRNA aminoacylation
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0000387	spliceosomal snRNP assembly
biological_process	GO:0006400	tRNA modification
biological_process	GO:0008618	7-methylguanosine metabolic process
biological_process	GO:0051225	spindle assembly
biological_process	GO:0010389	regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0006508	proteolysis
biological_process	GO:0009853	photorespiration
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0007346	regulation of mitotic cell cycle
biological_process	GO:0050826	response to freezing
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0016233	telomere capping
biological_process	GO:0010048	vernalization response
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0000910	cytokinesis
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0051103	DNA ligation involved in DNA repair
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0009630	gravitropism
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0019915	lipid storage
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0008033	tRNA processing
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0010014	meristem initiation
biological_process	GO:0010286	heat acclimation
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006457	protein folding
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0071702	organic substance transport
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0009409	response to cold
biological_process	GO:0006409	tRNA export from nucleus
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009165	nucleotide biosynthetic process
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
cellular_component	GO:0032777	Piccolo NuA4 histone acetyltransferase complex
cellular_component	GO:0005753	mitochondrial proton-transporting ATP synthase complex
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009332	glutamate-tRNA ligase complex
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0008250	oligosaccharyltransferase complex
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0044464	cell part
cellular_component	GO:0005829	cytosol
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009504	cell plate
cellular_component	GO:0045254	pyruvate dehydrogenase complex
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030131	clathrin adaptor complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0031981	nuclear lumen
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005773	vacuole
cellular_component	GO:0016020	membrane
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity
molecular_function	GO:0008186	RNA-dependent ATPase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0003910	DNA ligase (ATP) activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0015932	nucleobase-containing compound transmembrane transporter activity
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005488	binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0043424	protein histidine kinase binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0004818	glutamate-tRNA ligase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003689	DNA clamp loader activity
molecular_function	GO:0030276	clathrin binding
molecular_function	GO:0004819	glutamine-tRNA ligase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0019136	deoxynucleoside kinase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0070008	serine-type exopeptidase activity
molecular_function	GO:0003958	NADPH-hemoprotein reductase activity
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005198	structural molecule activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21683	0.78	Barchart \| Table
Spo01997	0.77	Barchart \| Table
Spo08968	0.77	Barchart \| Table
Spo17393	0.75	Barchart \| Table
Spo18446	0.75	Barchart \| Table
Spo03077	0.75	Barchart \| Table
Spo10138	0.74	Barchart \| Table
Spo26381	0.74	Barchart \| Table
Spo14123	0.74	Barchart \| Table
Spo00137	0.74	Barchart \| Table
Spo23889	0.74	Barchart \| Table
Spo24407	0.73	Barchart \| Table
Spo01615	0.73	Barchart \| Table
Spo23380	0.73	Barchart \| Table
Spo05208	0.72	Barchart \| Table
Spo06581	0.72	Barchart \| Table
Spo22475	0.72	Barchart \| Table
Spo16563	0.72	Barchart \| Table
Spo00391	0.72	Barchart \| Table
Spo17889	0.72	Barchart \| Table
Spo03846	0.71	Barchart \| Table
Spo09976	0.71	Barchart \| Table
Spo25344	0.71	Barchart \| Table
Spo10932	0.71	Barchart \| Table
Spo04279	0.71	Barchart \| Table
Spo13514	0.71	Barchart \| Table
Spo12725	0.71	Barchart \| Table
Spo05674	0.70	Barchart \| Table
Spo14260	0.70	Barchart \| Table
Spo01606	0.70	Barchart \| Table
Spo18349	0.70	Barchart \| Table
Spo10726	0.70	Barchart \| Table
Spo10935	0.70	Barchart \| Table
Spo26672	0.70	Barchart \| Table
Spo17539	0.70	Barchart \| Table
Spo03627	0.70	Barchart \| Table
Spo04262	0.69	Barchart \| Table
Spo12921	0.69	Barchart \| Table
Spo20941	0.69	Barchart \| Table
Spo24841	0.69	Barchart \| Table
Spo01913	0.69	Barchart \| Table
Spo24939	0.69	Barchart \| Table
Spo05888	0.69	Barchart \| Table
Spo26694	0.69	Barchart \| Table
Spo08627	0.69	Barchart \| Table
Spo20178	0.69	Barchart \| Table
Spo22458	0.68	Barchart \| Table
Spo01200	0.68	Barchart \| Table
Spo04587	0.68	Barchart \| Table
Spo04822	0.68	Barchart \| Table
Spo05941	0.68	Barchart \| Table
Spo06383	0.68	Barchart \| Table
Spo13318	0.68	Barchart \| Table
Spo17067	0.68	Barchart \| Table
Spo17367	0.68	Barchart \| Table
Spo17883	0.68	Barchart \| Table
Spo19899	0.68	Barchart \| Table
Spo21419	0.68	Barchart \| Table
Spo21646	0.68	Barchart \| Table
Spo22053	0.68	Barchart \| Table
Spo23866	0.68	Barchart \| Table
Spo23867	0.68	Barchart \| Table
Spo24065	0.68	Barchart \| Table
Spo24104	0.68	Barchart \| Table
Spo24268	0.68	Barchart \| Table
Spo07384	0.67	Barchart \| Table
Spo06137	0.67	Barchart \| Table
Spo15003	0.67	Barchart \| Table
Spo15431	0.67	Barchart \| Table
Spo24990	0.67	Barchart \| Table
Spo05732	0.67	Barchart \| Table
Spo17547	0.67	Barchart \| Table
Spo20806	0.67	Barchart \| Table
Spo20894	0.67	Barchart \| Table
Spo03211	0.67	Barchart \| Table
Spo01236	0.67	Barchart \| Table
Spo03089	0.67	Barchart \| Table
Spo22211	0.67	Barchart \| Table
Spo23321	0.67	Barchart \| Table
Spo23479	0.67	Barchart \| Table
Spo23698	0.67	Barchart \| Table
Spo00282	0.67	Barchart \| Table
Spo02242	0.67	Barchart \| Table
Spo23932	0.67	Barchart \| Table
Spo27104	0.67	Barchart \| Table
Spo02214	0.67	Barchart \| Table
Spo24600	0.67	Barchart \| Table
Spo09145	0.67	Barchart \| Table
Spo08894	0.67	Barchart \| Table
Spo10486	0.67	Barchart \| Table
Spo08312	0.67	Barchart \| Table
Spo08116	0.67	Barchart \| Table
Spo11882	0.67	Barchart \| Table
Spo01313	0.66	Barchart \| Table
Spo09298	0.66	Barchart \| Table
Spo16394	0.66	Barchart \| Table
Spo05870	0.66	Barchart \| Table
Spo01171	0.66	Barchart \| Table
Spo25072	0.66	Barchart \| Table
Spo10080	0.66	Barchart \| Table
Spo20924	0.66	Barchart \| Table
Spo05360	0.66	Barchart \| Table
Spo04669	0.66	Barchart \| Table
Spo25615	0.66	Barchart \| Table
Spo03835	0.66	Barchart \| Table
Spo20772	0.66	Barchart \| Table
Spo11073	0.66	Barchart \| Table
Spo26276	0.66	Barchart \| Table
Spo24153	0.66	Barchart \| Table
Spo26608	0.66	Barchart \| Table
Spo22308	0.66	Barchart \| Table
Spo03076	0.66	Barchart \| Table
Spo03068	0.66	Barchart \| Table
Spo23127	0.66	Barchart \| Table
Spo08123	0.66	Barchart \| Table
Spo02440	0.66	Barchart \| Table
Spo13492	0.66	Barchart \| Table
Spo06755	0.66	Barchart \| Table
Spo13729	0.66	Barchart \| Table
Spo02163	0.66	Barchart \| Table
Spo06078	0.66	Barchart \| Table
Spo15401	0.66	Barchart \| Table
Spo01713	0.65	Barchart \| Table
Spo07569	0.65	Barchart \| Table
Spo05484	0.65	Barchart \| Table
Spo27217	0.65	Barchart \| Table
Spo21910	0.65	Barchart \| Table
Spo19918	0.65	Barchart \| Table
Spo12118	0.65	Barchart \| Table
Spo04240	0.65	Barchart \| Table
Spo26978	0.65	Barchart \| Table
Spo18274	0.65	Barchart \| Table
Spo22869	0.65	Barchart \| Table
Spo14515	0.65	Barchart \| Table
Spo23650	0.65	Barchart \| Table