Spo18300 (gene) | SpinachBase

Overview


Name	Spo18300
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Nucleolar essential protein-related, putative
Location	SpoScf_01455 : 46929 .. 51462 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTAAATAAAAATAAACAAACGAATACTGTTTCTCCTCAAACTCCAAATCGGGTTAGTCGCGTCTGCTCTGCATGGACTGCATCTCCTTCCTTCTCTTGGAACCCTAACAATTCAATTCTTTCACCACCTCCAGTCGGCGGCCCTTCCTTAAACCACCTCTCCTTCTCTACTGCTGATATACTCGGTATTAATTATTATTTTTCTATCGATTTTGTTGGATTTTTCAGTTGATTTTATTTGTATTTTTATTACTTCAAACAGTGTGATTTCAAATTGTTAATTATATCATGTTGCGTTTGTTTTGGTGTATACCTACTTCATAATTCTACTTGAATTTCGTATTATAATTTTCGAAATAAGATTCTCACAATATTGATTAGGAATTTAGGATTACTAGCTCAGGGACATGCCTGAGTAATTCTACTTGAATTTCGTATTATAATTTTCGAAATAAGATTCTCACAATATTGATTAGGAATTTAGGATTACTAGCTCAGGGACATGCCTGAGTATATCGAATTGGGTTTTAGGGTTTAAGCCAGCGATTGCAAATTTGCAATTCAGCTCTGAAATCTATGTTGTGTTGTTATCAGGATGGGTAAAACAAAAAGAAAGGCGGGATCTTTGCAGCCCTGCTCAACAAATAGGAAGAAGTTAAATAGGGATGGGCTAGCAGTTAAAGGAGACGAGGAAGAGCTTGGCGAAAAAGAGTTAAATTCAATACAGAAGTTTAGTCATCCGACTGTGAATGAAGTGAAAAATGAAGATGATGAGGTTAATCTATGCGGCATTCCTTTGTCCCTTACTTGTAAAGATGCAGGAGCAGGAGCAGGCGTGACATTTGTTCTTGAGAAGGCTTCTTTGACCCTTGCCAACATTGGAAAAGTAAGTGCATTTTCAGACTAGTTGGATGTTGGATGTTGAATGTATAATGTAAAATTTCTGTTGTTTAATCCCAAAGTGTTTAATGTTTAATAGTATGTCAATTGTCACAACTCACAAGAACTAATCACTGTTTTTCTTTCTTCAGAGGTACCAAATACTGAATTCAAATGAGCATGCTTCTTATTTACGAAAGAAGAAAATGGATCCTTACAAATACAGGCCTGACATAGTCCACGAGGTTCGTAGGCTTTTCCTATTGATCCTTGAAATAGCTGTTAATGTACTTTCCATTTGTTGTATCTGATCGATGACTGTTTTAACTTGTGGTATGGAGACTTTTACATTAGGGAGAGGAACAAAGAGCAGGGTACCTCTGCTGGTTTGGGTGTTGTACAGTAGGAAACAATAAGAATGTTAAATTCAAAAGGAGAAGGGAGTTATAAGGATGGAGGGAGAAGAAAAATAGAACTTTCATTCAGGAAAGGCGAGGGACAAAGGGTGGACATGAAGAGTTGTAACTTGTTATAGTGACGGAGGGACCCTTTTCTACCCACACCATTGACATACTTAAAAGTCTGGACTTTGCTAAGAAACCCTGCTACGAGTGAGGAATACAATTCTTCCCCTGGGGAGAGGAGTGTGGAGTTACTAACTATCATTGTTGATTCTAGTAACCTTACGTTTTCATTTCTTGTCTATATTGTCTTTTTATTTGAGGAAAATATGCGTCCACATTTATTGTGATATTTCTAAGTCTTTCACCAACCAATCCTTAACGCCATTTTTGTTCCATAACTGATATTTCTAGGCGCTCAATGATATTATGAATTCCAGACTTAGTAAAAGCGGTAGGCTGAAAGCAGTGTACATCCGGACAGAGGATGGAGTTCTGATCAAAGTAGAACCATATGCTAAGATACCATCGGACTTAGAAAGTTTCTGCAGTATGATGGGTAAGTTCTTTCCTTTTAAGTGAGCTTGATGATTTCAGGGTTGTGCAAATTATGCTTTTATATCATAACCTGTACAATTTGTCATTTGTTTTTATGTTGTCAAACATGTCTCTGATGAACACCTGACTGTTACAGCCGAATTACTGCAAACACTCAGTATCAAAGCTAAGGGTAACCGCAAAAAGCTTTTGCGCGTGGTGGCCAACCCTGTAACCAAGTATTTACCTCCCTCGTCACCTAAGATAGGTAAGCCTTGACAATATAATGATGGAGAAAATTTGATTACTTTGGCAATTCGTTAATGCAAATATGTTTTCCTGCTTTAGGTCTTTCATTTAGCTCCGAGAAGGCTGTTGAGCTACGAGAGCATGTCAGTGGAATCAATAGGGATGAAGATGTTGTCTTTGTGGTAGGTTCAGTTATTTGATTTGGTATATGCATTAGGCAGTCTTTGCTCTTGTCTCTGCTTCTGATTACCTTAACTCTCTGAAACTTTCAGGTTGGTGTGATGGCTCATGGTAAAATTGAATGTGATTACATTGAGGACCTTGTATCGGGTAGTGTGCTTGTTTAGATTTCTTGTTTTATATGTTTCATACTTCCGATGATTGAGAATGCAGTTTCTCATAGTCCATGAATTTTCACTTGGTAATGGTTTTCCATGATTTATAAATTCACTTTTATCAGCCATATACAGAGTATAATTTCTCTGTGTAGAAATAGTTCCACCAATTGTTTTTTGACAAGTATCGTAATAGTTGCACAAATTTTCTAATTTTGGTATGTTTTTAGGACAAAAGACCATAGTGCCCATATCTAGTTGTAGGTTCAGTAGGACCCAAGTTTCTGTTCTAGTAGAGATCAATGGTGAAAGTAAAGTTTTGAACCTTTGCCAAACATAGTGACTTTGTTCTCTAAGTTGCAGCTTGTTTCTCTTATGTCTATTTCTTCTGATGATTATGTGATGATTATGGAACTGGGACCTAATTTCCTTAGTTGACAGTGTAAATGAAACAATTCATTACTGTCATCTATTTAATCATATAATATCCTTTGTTTTTTTAGGATTCTCAAAGAGATACCAAACTGGTGCGATTATTATTGAATTTTTCTTGTGTTTTGTTGTTGGCAGTTTCCTCCTTTCACTTAAGTGCTGCGATGTGTTTGAGAATTATATTAATTGCAATGGAGAGGAAATGGAGCATATTGTGAAGTTGAAGTTGCACTCCTAATGTTTTTTAGACGGGGATAAGTATTTACGCAAATTCTTGATCTCTAATTTGAACTCTGGTACCGTGTTATTAATTTAGTAGGAAATGATTTATTATGTTACAGAACTAATCTATGGTATATTATGCTATTAAACACACTAAGTTATCCCTTGCGGATCTCGGAGATGCTGAAGCAACGTTGCTAGCCAAAGGATGACAAATTGTAACTGCAGTCAAATGTTAATCAAGTAGTTTTTATTTTTTATGTAAATTTTTAGGAAAATTTGTAGATATTATATACCCACCTTTGGCCGGTTTTCTTTAATTAAGCCTAACCATGGGATATTTTTTAATAATTCCACCTTTAAGCCCTAACTACTTTTATTAGGCCGAAATGACTGGCTACCGGCAACAAAGTCAACGTTTCTTTCGTTGACAACCAAAACTTGGTTTCCCTCCTGAAATGCTTGCCACGTCATTCATTAATTGCCAACTACTCAAGCATTTCGAAAAAAAATTCCAAAAAACTTTACAACTCTCTCTCTTACCTTCTCTACTCTCCCGTACTTCCTCTCTCCTCCATTACTGAACCTTCAACCACAATTGTACTAGTTCATGACATCATCTACGAGTTTCCTGTGGAAATAGGCACTTCATCAACGCGCAATCAATTTTCGTCCCCATAATCGTACAATTGAAGGTCAGACCTATAAACCCTAGTGTTTTTCTTCCTCCATATTATCCTTTTTAGTCTGCAATTTTTTGATCTTTTCCTCCATCAACTTCTTGTCATACTACATCTCAGCTATGGTTGTATTAGCTTCAAAAATCTGAAGTTGAAGGTGGTCAGGTTCATTGTTATTAGGAAGAATCCACCTGAAAAATTCGCACTTCGTATTCTACAATACGATTAACACAACCAAATTAATCAACCAAACCAAAATTCACCAACCTTGCCAAAATCAATTACTAATTTAGCCCACAAAAGTTCAATTAAACCCTCATTAATTAGGATGACTGAATCCTAAATACATGAATTAAAACCAATTGCAAAGTTTTTACCCTTACAAACAATTCGTGACTTGTGGTGAAAATCAAAAAAATTGCCACAAATCAAAGGATCTTATCGGCCATAAAGGGCAGCCATGAAACTTCATTCCAACATTTGGACCTCGCTTAACAGTACGCATAACAGAGTAATTTCCACATTCACAAAACAATGGTGGCACCATCCCTCCCCTTGAATTTGATAAAGACCCAGATCCGACAGGTAATTGCTTTGAACCAGGCATAGTAATTGCTTTGAATGACGAGGTGTGAGGTAGCAAGAATGGTGGAGAAGAAGAAATGTCGCAGAGGAGAAGAAGAAAAATAGCAGAGAAAATGAGGAAGAAATAGAAAGAATGAAGATATAAAGAAAAAGAGGGGAAAAAAGAATTAAAATTACAACAGTTAATTATAATGCCACGTAGGATGATTCATC

mRNA sequence

GAGTAAATAAAAATAAACAAACGAATACTGTTTCTCCTCAAACTCCAAATCGGGTTAGTCGCGTCTGCTCTGCATGGACTGCATCTCCTTCCTTCTCTTGGAACCCTAACAATTCAATTCTTTCACCACCTCCAGTCGGCGGCCCTTCCTTAAACCACCTCTCCTTCTCTACTGCTGATATACTCGGATGGGTAAAACAAAAAGAAAGGCGGGATCTTTGCAGCCCTGCTCAACAAATAGGAAGAAGTTAAATAGGGATGGGCTAGCAGTTAAAGGAGACGAGGAAGAGCTTGGCGAAAAAGAGTTAAATTCAATACAGAAGTTTAGTCATCCGACTGTGAATGAAGTGAAAAATGAAGATGATGAGGTTAATCTATGCGGCATTCCTTTGTCCCTTACTTGTAAAGATGCAGGAGCAGGAGCAGGCGTGACATTTGTTCTTGAGAAGGCTTCTTTGACCCTTGCCAACATTGGAAAAAGGTACCAAATACTGAATTCAAATGAGCATGCTTCTTATTTACGAAAGAAGAAAATGGATCCTTACAAATACAGGCCTGACATAGTCCACGAGGCGCTCAATGATATTATGAATTCCAGACTTAGTAAAAGCGGTAGGCTGAAAGCAGTGTACATCCGGACAGAGGATGGAGTTCTGATCAAAGTAGAACCATATGCTAAGATACCATCGGACTTAGAAAGTTTCTGCAGTATGATGGCCGAATTACTGCAAACACTCAGTATCAAAGCTAAGGGTAACCGCAAAAAGCTTTTGCGCGTGGTGGCCAACCCTGTAACCAAGTATTTACCTCCCTCGTCACCTAAGATAGGTCTTTCATTTAGCTCCGAGAAGGCTGTTGAGCTACGAGAGCATGTCAGTGGAATCAATAGGGATGAAGATGTTGTCTTTGTGGTTGGTGTGATGGCTCATGGTAAAATTGAATGTGATTACATTGAGGACCTTGTATCGGTTTCCTCCTTTCACTTAAGTGCTGCGATGTGTTTGAGAATTATATTAATTGCAATGGAGAGGAAATGGAGCATATTGTGAAGTTGAAGTTGCACTCCTAATGTTTTTTAGACGGGGATAAGTATTTACGCAAATTCTTGATCTCTAATTTGAACTCTGGTACCGTGTTATTAATTTAGTAGGAAATGATTTATTATGTTACAGAACTAATCTATGGTATATTATGCTATTAAACACACTAAGTTATCCCTTGCGGATCTCGGAGATGCTGAAGCAACGTTGCTAGCCAAAGGATGACAAATTGTAACTGCAGTCAAATGTTAATCAAGTAGTTTTTATTTTTTATGTAAATTTTTAGGAAAATTTGTAGATATTATATACCCACCTTTGGCCGGTTTTCTTTAATTAAGCCTAACCATGGGATATTTTTTAATAATTCCACCTTTAAGCCCTAACTACTTTTATTAGGCCGAAATGACTGGCTACCGGCAACAAAGTCAACGTTTCTTTCGTTGACAACCAAAACTTGGTTTCCCTCCTGAAATGCTTGCCACGTCATTCATTAATTGCCAACTACTCAAGCATTTCGAAAAAAAATTCCAAAAAACTTTACAACTCTCTCTCTTACCTTCTCTACTCTCCCGTACTTCCTCTCTCCTCCATTACTGAACCTTCAACCACAATTGTACTAGTTCATGACATCATCTACGAGTTTCCTGTGGAAATAGGCACTTCATCAACGCGCAATCAATTTTCGTCCCCATAATCGTACAATTGAAGGTCAGACCTATAAACCCTAGTGTTTTTCTTCCTCCATATTATCCTTTTTAGTCTGCAATTTTTTGATCTTTTCCTCCATCAACTTCTTGTCATACTACATCTCAGCTATGGTTGTATTAGCTTCAAAAATCTGAAGTTGAAGGTGGTCAGGTTCATTGTTATTAGGAAGAATCCACCTGAAAAATTCGCACTTCGTATTCTACAATACGATTAACACAACCAAATTAATCAACCAAACCAAAATTCACCAACCTTGCCAAAATCAATTACTAATTTAGCCCACAAAAGTTCAATTAAACCCTCATTAATTAGGATGACTGAATCCTAAATACATGAATTAAAACCAATTGCAAAGTTTTTACCCTTACAAACAATTCGTGACTTGTGGTGAAAATCAAAAAAATTGCCACAAATCAAAGGATCTTATCGGCCATAAAGGGCAGCCATGAAACTTCATTCCAACATTTGGACCTCGCTTAACAGTACGCATAACAGAGTAATTTCCACATTCACAAAACAATGGTGGCACCATCCCTCCCCTTGAATTTGATAAAGACCCAGATCCGACAGGTAATTGCTTTGAACCAGGCATAGTAATTGCTTTGAATGACGAGGTGTGAGGTAGCAAGAATGGTGGAGAAGAAGAAATGTCGCAGAGGAGAAGAAGAAAAATAGCAGAGAAAATGAGGAAGAAATAGAAAGAATGAAGATATAAAGAAAAAGAGGGGAAAAAAGAATTAAAATTACAACAGTTAATTATAATGCCACGTAGGATGATTCATC

Coding sequence (CDS)

ATGGGTAAAACAAAAAGAAAGGCGGGATCTTTGCAGCCCTGCTCAACAAATAGGAAGAAGTTAAATAGGGATGGGCTAGCAGTTAAAGGAGACGAGGAAGAGCTTGGCGAAAAAGAGTTAAATTCAATACAGAAGTTTAGTCATCCGACTGTGAATGAAGTGAAAAATGAAGATGATGAGGTTAATCTATGCGGCATTCCTTTGTCCCTTACTTGTAAAGATGCAGGAGCAGGAGCAGGCGTGACATTTGTTCTTGAGAAGGCTTCTTTGACCCTTGCCAACATTGGAAAAAGGTACCAAATACTGAATTCAAATGAGCATGCTTCTTATTTACGAAAGAAGAAAATGGATCCTTACAAATACAGGCCTGACATAGTCCACGAGGCGCTCAATGATATTATGAATTCCAGACTTAGTAAAAGCGGTAGGCTGAAAGCAGTGTACATCCGGACAGAGGATGGAGTTCTGATCAAAGTAGAACCATATGCTAAGATACCATCGGACTTAGAAAGTTTCTGCAGTATGATGGCCGAATTACTGCAAACACTCAGTATCAAAGCTAAGGGTAACCGCAAAAAGCTTTTGCGCGTGGTGGCCAACCCTGTAACCAAGTATTTACCTCCCTCGTCACCTAAGATAGGTCTTTCATTTAGCTCCGAGAAGGCTGTTGAGCTACGAGAGCATGTCAGTGGAATCAATAGGGATGAAGATGTTGTCTTTGTGGTTGGTGTGATGGCTCATGGTAAAATTGAATGTGATTACATTGAGGACCTTGTATCGGTTTCCTCCTTTCACTTAAGTGCTGCGATGTGTTTGAGAATTATATTAATTGCAATGGAGAGGAAATGGAGCATATTGTGA

Protein sequence

MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDEVNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18300.1	Spo18300.1	mRNA

Homology

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BLAST of Spo18300.1 vs. NCBI nr
Match: gi|902099700|gb|KNA03487.1| (hypothetical protein SOVF_208590 [Spinacia oleracea])

HSP 1 Score: 553.9 bits (1426), Expect = 1.600e-154
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 1


		  
Query: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60
           MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE
Sbjct: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60

Query: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120
           VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK
Sbjct: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120

Query: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180
           YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL
Sbjct: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180

Query: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240
           QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF
Sbjct: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240

Query: 241 VVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           VVGVMAHGKIECDYIEDLVSVS FHLSAAMCLRIILIAMERKWSIL
Sbjct: 241 VVGVMAHGKIECDYIEDLVSVSPFHLSAAMCLRIILIAMERKWSIL 286

[Close]

BLAST of Spo18300.1 vs. NCBI nr
Match: gi|902196961|gb|KNA13280.1| (hypothetical protein SOVF_118180 [Spinacia oleracea])

HSP 1 Score: 512.7 bits (1319), Expect = 4.200e-142
Identity = 267/286 (93.36%), Postives = 271/286 (94.76%), Query Frame = 1


		  
Query: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60
           MGK KRKA SLQ CS  +KKLNRDG   KGDEE+LGEKELNS+Q FSH  V+EVKN DDE
Sbjct: 1   MGKIKRKAKSLQSCS-KKKKLNRDGSVAKGDEEDLGEKELNSVQNFSHLNVDEVKNGDDE 60

Query: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120
           VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHA YLRKKKMDPYK
Sbjct: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHAGYLRKKKMDPYK 120

Query: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180
           YRPDIVHEALNDIMNSRLSK GRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL
Sbjct: 121 YRPDIVHEALNDIMNSRLSKGGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180

Query: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240
           QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF
Sbjct: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240

Query: 241 VVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           VVGVMAHGKIECDYIEDLVSVS FHLSAAMCLRIILIAMERKWSIL
Sbjct: 241 VVGVMAHGKIECDYIEDLVSVSPFHLSAAMCLRIILIAMERKWSIL 285

[Close]

BLAST of Spo18300.1 vs. NCBI nr
Match: gi|731334780|ref|XP_010678392.1| (PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 387.9 bits (995), Expect = 1.600e-104
Identity = 205/285 (71.93%), Postives = 237/285 (83.16%), Query Frame = 1


		  
Query: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60
           MGK ++K  SLQPCST RKKLNRDGL   GDE + GE EL+S  + S  T +EVK ED+E
Sbjct: 1   MGKIEQK--SLQPCSTKRKKLNRDGLITIGDEAKRGENELDSTSQISQSTTDEVKIEDEE 60

Query: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120
           VNLC IP+  TC + GA  GVTF+LEKASLTLA +GKRYQIL+S+EHA YLRKKK++PY 
Sbjct: 61  VNLCCIPVLHTCGNPGARGGVTFILEKASLTLAYVGKRYQILSSDEHADYLRKKKLNPYD 120

Query: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180
           +RPDIVHEAL  IM+SRL  +GRL+AVYIRT++G+LIKVEP + IP  L +FC+MMAELL
Sbjct: 121 HRPDIVHEALLQIMDSRLRLAGRLRAVYIRTDEGILIKVEPNSMIPRTLGNFCNMMAELL 180

Query: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240
           QTL IKAKG+ KKLLRVVANPV+KYLPP S KIGLSFSSEKAV+LRE+VSG+N +EDVVF
Sbjct: 181 QTLRIKAKGHHKKLLRVVANPVSKYLPPMSRKIGLSFSSEKAVQLREYVSGVNCNEDVVF 240

Query: 241 VVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSI 286
           VVG MAHGKIECDYIEDLVSVS   LS+A CLR I IAMERKWSI
Sbjct: 241 VVGAMAHGKIECDYIEDLVSVSHHRLSSADCLRHICIAMERKWSI 283

[Close]

BLAST of Spo18300.1 vs. NCBI nr
Match: gi|645224116|ref|XP_008218955.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Prunus mume])

HSP 1 Score: 265.0 bits (676), Expect = 1.500e-67
Identity = 148/280 (52.86%), Postives = 192/280 (68.57%), Query Frame = 1


		  
Query: 7   KAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDEVNLCGI 66
           K  +L PCST   K    G+       + GE E N              +ED    L GI
Sbjct: 2   KRQTLGPCSTRNSKSRFGGI-------KQGEDERN--------------DEDSMYQLPGI 61

Query: 67  PLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIV 126
           PL  T  +      VTFVLEKASL  A +G+ YQILN   HA +LR+KKMDPYKYRPDIV
Sbjct: 62  PL--TPSNQNMNRRVTFVLEKASLVPAFVGRTYQILNPQVHADFLRRKKMDPYKYRPDIV 121

Query: 127 HEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIK 186
           HEAL  IM++RL K+GRL AVYI+T++GVLIKVEP+A IP  LE FC MM++LLQ LSIK
Sbjct: 122 HEALRQIMDTRLCKAGRLHAVYIKTDEGVLIKVEPHATIPESLEKFCYMMSQLLQKLSIK 181

Query: 187 AKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMA 246
           + G R++LLRVV NP+ ++LP +S KIGLS SS+KAV+LR++V  ++ + ++VFVVG MA
Sbjct: 182 STGRRERLLRVVKNPIAQHLPANSLKIGLSMSSQKAVDLRDYVHAVSDNVNLVFVVGAMA 241

Query: 247 HGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           HG+I+ +  +D++SVS + LSA +CL  I IA+ERKW+IL
Sbjct: 242 HGRIDSENADDIISVSDYPLSAVVCLERISIALERKWNIL 258

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BLAST of Spo18300.1 vs. NCBI nr
Match: gi|1012346611|gb|KYP57803.1| (hypothetical protein KK1_004082 [Cajanus cajan])

HSP 1 Score: 264.2 bits (674), Expect = 2.600e-67
Identity = 137/235 (58.30%), Postives = 179/235 (76.17%), Query Frame = 1


		  
Query: 52  NEVKNEDDEVNLCGIP-LSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASY 111
           +  ++EDD  ++  +P +        +  GV F+LEKASL  A +GK+YQILN +EHA++
Sbjct: 7   HSTRDEDDHDSMPQLPSIRPPPHSHNSKQGVYFILEKASLVAAFVGKKYQILNPDEHANF 66

Query: 112 LRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLE 171
           LR+K M+PY +RPDIVHEAL  IM+SRL  SGRL+AV+IRT++G+LI+V P  +IP  L 
Sbjct: 67  LRRKNMNPYDFRPDIVHEALLQIMSSRLCLSGRLRAVFIRTDEGILIRVAPQTQIPKTLG 126

Query: 172 SFCSMMAELLQTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVS 231
           SFC+MM ELLQ  SIK+KG   KLL+++ NPVT +LP +S KIGLSFSS KAV+LR++VS
Sbjct: 127 SFCNMMMELLQKFSIKSKGGHGKLLKLIQNPVTNHLPINSLKIGLSFSSTKAVQLRDYVS 186

Query: 232 GINRDEDVVFVVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSI 286
           G N DE++VFVVG MAHGKI+ DYIEDL+SVS + LSA  CLR I IA+ER W+I
Sbjct: 187 GANCDENLVFVVGAMAHGKIDVDYIEDLISVSGYPLSAGTCLRRICIALERSWNI 241

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BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q883_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_208590 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.100e-154
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 1


		  
Query: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60
           MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE
Sbjct: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60

Query: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120
           VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK
Sbjct: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120

Query: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180
           YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL
Sbjct: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180

Query: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240
           QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF
Sbjct: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240

Query: 241 VVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           VVGVMAHGKIECDYIEDLVSVS FHLSAAMCLRIILIAMERKWSIL
Sbjct: 241 VVGVMAHGKIECDYIEDLVSVSPFHLSAAMCLRIILIAMERKWSIL 286

[Close]

BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R187_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118180 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 2.900e-142
Identity = 267/286 (93.36%), Postives = 271/286 (94.76%), Query Frame = 1


		  
Query: 1   MGKTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTVNEVKNEDDE 60
           MGK KRKA SLQ CS  +KKLNRDG   KGDEE+LGEKELNS+Q FSH  V+EVKN DDE
Sbjct: 1   MGKIKRKAKSLQSCS-KKKKLNRDGSVAKGDEEDLGEKELNSVQNFSHLNVDEVKNGDDE 60

Query: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYK 120
           VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHA YLRKKKMDPYK
Sbjct: 61  VNLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHAGYLRKKKMDPYK 120

Query: 121 YRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180
           YRPDIVHEALNDIMNSRLSK GRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL
Sbjct: 121 YRPDIVHEALNDIMNSRLSKGGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELL 180

Query: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240
           QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF
Sbjct: 181 QTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVF 240

Query: 241 VVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           VVGVMAHGKIECDYIEDLVSVS FHLSAAMCLRIILIAMERKWSIL
Sbjct: 241 VVGVMAHGKIECDYIEDLVSVSPFHLSAAMCLRIILIAMERKWSIL 285

[Close]

BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Match: A0A151SSN0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004082 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.800e-67
Identity = 137/235 (58.30%), Postives = 179/235 (76.17%), Query Frame = 1


		  
Query: 52  NEVKNEDDEVNLCGIP-LSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASY 111
           +  ++EDD  ++  +P +        +  GV F+LEKASL  A +GK+YQILN +EHA++
Sbjct: 7   HSTRDEDDHDSMPQLPSIRPPPHSHNSKQGVYFILEKASLVAAFVGKKYQILNPDEHANF 66

Query: 112 LRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLE 171
           LR+K M+PY +RPDIVHEAL  IM+SRL  SGRL+AV+IRT++G+LI+V P  +IP  L 
Sbjct: 67  LRRKNMNPYDFRPDIVHEALLQIMSSRLCLSGRLRAVFIRTDEGILIRVAPQTQIPKTLG 126

Query: 172 SFCSMMAELLQTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVS 231
           SFC+MM ELLQ  SIK+KG   KLL+++ NPVT +LP +S KIGLSFSS KAV+LR++VS
Sbjct: 127 SFCNMMMELLQKFSIKSKGGHGKLLKLIQNPVTNHLPINSLKIGLSFSSTKAVQLRDYVS 186

Query: 232 GINRDEDVVFVVGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSI 286
           G N DE++VFVVG MAHGKI+ DYIEDL+SVS + LSA  CLR I IA+ER W+I
Sbjct: 187 GANCDENLVFVVGAMAHGKIDVDYIEDLISVSGYPLSAGTCLRRICIALERSWNI 241

[Close]

BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Match: A0A151QPM5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047098 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.000e-66
Identity = 128/206 (62.14%), Postives = 166/206 (80.58%), Query Frame = 1


		  
Query: 80  GVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLS 139
           GV F+LEKASL  A +GK+YQILN +EHA++LR+K M+PY +RPDIVHEAL  I++SRL 
Sbjct: 19  GVYFILEKASLVAAYVGKKYQILNPDEHANFLRRKNMNPYDFRPDIVHEALLQIVSSRLC 78

Query: 140 KSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVA 199
            SGRL+AV+IRT++G+LI+VEP+ +IP  L SFC+MM ELLQ  SIK+KG   KLLR++ 
Sbjct: 79  LSGRLRAVFIRTDEGILIRVEPHTQIPKTLGSFCNMMVELLQKFSIKSKGGHGKLLRLIQ 138

Query: 200 NPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECDYIEDLV 259
           NPVT +LP +S KIGLSFSS K V+LR++V+  N DE++VFVVGVMAHGKI+ +YI+DL+
Sbjct: 139 NPVTYHLPVNSRKIGLSFSSSKTVQLRDYVTDANNDENLVFVVGVMAHGKIDVEYIDDLI 198

Query: 260 SVSSFHLSAAMCLRIILIAMERKWSI 286
           SVS + LS   CLR I +A+ER W I
Sbjct: 199 SVSGYPLSVGTCLRRICVALERNWKI 224

[Close]

BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Match: A0A061G688_THECC (Nucleolar essential protein-related, putative OS=Theobroma cacao GN=TCM_016205 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.600e-66
Identity = 145/285 (50.88%), Postives = 195/285 (68.42%), Query Frame = 1


		  
Query: 3   KTKRKAGSLQPCSTNRKKLNRDGLAVKGDEEELGEKELNSIQKFSHPTV-NEVKNEDDEV 62
           K K     L+ CS  R +L   G  +   E +  +K L  + K  +  V NE  +E    
Sbjct: 33  KKKSDRAILKLCSRQRPELEATGKGINAVEAK--DKTLELVNKGRNQLVRNETISEVAAF 92

Query: 63  NLCGIPLSLTCKDAGAGAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKY 122
            L GIPL+ +  D  +G  VTFVLE+ASL  A +G+RY ILNSNEHA++LRKK  +PYKY
Sbjct: 93  ELPGIPLAHSEPDRKSG--VTFVLEQASLVCAKVGRRYPILNSNEHAAFLRKKNKNPYKY 152

Query: 123 RPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQ 182
           RPDI+HE L+ I++SRL KSGR++A+Y++T++GVLIKVEP   IP     F +MMAELLQ
Sbjct: 153 RPDIIHEVLSRIIDSRLCKSGRIQAIYVKTDEGVLIKVEPNTHIPRTPRRFRNMMAELLQ 212

Query: 183 TLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFV 242
            LS+KA     KLLR+V NPVT++LP +S KIGLS+SS + V L+++V GI+ +E++VFV
Sbjct: 213 KLSVKAANKHGKLLRLVQNPVTQHLPANSRKIGLSYSSNQLVRLKDYVGGISDNENLVFV 272

Query: 243 VGVMAHGKIECDYIEDLVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           VG MAHGKI+ DY++DL+S+    +SA MCL  I  A+E KW IL
Sbjct: 273 VGAMAHGKIDADYVDDLISIYGGRMSARMCLEEIFEAVESKWKIL 313

[Close]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Match: NEP1_MOUSE (Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus GN=Emg1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.500e-38
Identity = 88/209 (42.11%), Postives = 128/209 (61.24%), Query Frame = 1


		  
Query: 78  GAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSR 137
           G  +  VLE ASL    +GK Y++LN + H S L K   DP + RPDI H++L  +M+S 
Sbjct: 40  GRRLIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSP 99

Query: 138 LSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRV 197
           L+++G L+ VYI T+  VLI+V P  +IP   + FC +M +LL  LS++A    +KLL+V
Sbjct: 100 LNRAGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKV 159

Query: 198 VANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECDYIED 257
           + NPV+ + P    KIG SFS E   ++RE V      + VVFVVG  AHGK+  +Y E 
Sbjct: 160 IKNPVSDHFPVGCMKIGTSFSVEDISDIRELVPS---SDPVVFVVGAFAHGKVSVEYTEK 219

Query: 258 LVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           +VS+S++ LSAA+    +  A E  W ++
Sbjct: 220 MVSISNYPLSAALTCAKVTTAFEEVWGVI 244

[Close]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Match: NEP1_HUMAN (Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens GN=EMG1 PE=1 SV=4)

HSP 1 Score: 157.5 bits (397), Expect = 2.100e-37
Identity = 85/209 (40.67%), Postives = 128/209 (61.24%), Query Frame = 1


		  
Query: 78  GAGVTFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSR 137
           G  +  VLE ASL    +GK Y++LN ++H S L K   DP + RPDI H++L  +M+S 
Sbjct: 40  GRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSP 99

Query: 138 LSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRV 197
           L+++G L+ VYI T+  VLI+V P  +IP   + FC +M +LL  LS++A    +KLL+V
Sbjct: 100 LNRAGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKV 159

Query: 198 VANPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECDYIED 257
           + NPV+ + P    K+G SFS     ++RE V      + +VFVVG  AHGK+  +Y E 
Sbjct: 160 IKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPS---SDPIVFVVGAFAHGKVSVEYTEK 219

Query: 258 LVSVSSFHLSAAMCLRIILIAMERKWSIL 287
           +VS+S++ LSAA+    +  A E  W ++
Sbjct: 220 MVSISNYPLSAALTCAKLTTAFEEVWGVI 244

[Close]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Match: NEP1_CAEEL (Ribosomal RNA small subunit methyltransferase nep-1 OS=Caenorhabditis elegans GN=Y39A1A.14 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.900e-35
Identity = 80/203 (39.41%), Postives = 127/203 (62.56%), Query Frame = 1


		  
Query: 84  VLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGR 143
           VLE  SL  A +G  Y IL+S++HA++LRK+K DP  YRPDI+H+ L ++++S L+++G+
Sbjct: 31  VLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRAGK 90

Query: 144 LKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVANPVT 203
           L+ V+ RT   VL+ V P  +IP   + FC +M +LL  LSI+A    +KL+ VV NPV+
Sbjct: 91  LR-VFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPVS 150

Query: 204 KYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECDYIEDLVSVSS 263
            +LP  S K+ +SF+  +     + V+    DE +V ++G +A GKI  DY +    +S+
Sbjct: 151 NHLPVGSRKMLMSFNVPELTMANKLVAP-ETDEPLVLIIGGIARGKIVVDYNDSETKISN 210

Query: 264 FHLSAAMCLRIILIAMERKWSIL 287
           + LSAA+    +   +E  W I+
Sbjct: 211 YPLSAALTCAKVTSGLEEIWGII 231

[Close]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Match: NEP1_DROME (Ribosomal RNA small subunit methyltransferase NEP1 OS=Drosophila melanogaster GN=CG3527 PE=3 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 4.600e-32
Identity = 74/208 (35.58%), Postives = 121/208 (58.17%), Query Frame = 1


		  
Query: 84  VLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGR 143
           VLE A L    +   +++LN ++HA  +RK + DP   RPDI H+ L  + +S L+++G 
Sbjct: 46  VLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRAGL 105

Query: 144 LKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVANPVT 203
           L+ V++RTE  VLI++ P  +IP   + F  +M +LL    I+A  + ++L+ V+ NP+T
Sbjct: 106 LQ-VFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPIT 165

Query: 204 KYLPPSSPKIGLSFSSEKAVELREHV-----SGINRDEDVVFVVGVMAHGKIECDYIEDL 263
            ++P    K  +SFS +     R+ V     +  + DE VV V+G  AHG ++ DY E+L
Sbjct: 166 DHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEEL 225

Query: 264 VSVSSFHLSAAMCLRIILIAMERKWSIL 287
            S+S++ LSAA+    I  A E  W ++
Sbjct: 226 FSISNYPLSAAIACSKICSAFEEVWGVV 252

[Close]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Match: NEP1_SCHPO (Ribosomal RNA small subunit methyltransferase mra1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mra1 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.100e-28
Identity = 75/203 (36.95%), Postives = 123/203 (60.59%), Query Frame = 1


		  
Query: 84  VLEKASLTLANIGK----RYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLS 143
           VL++A L +  +GK    +YQ+LN ++H   L+K   +  + RPDI H+ L  +++S L+
Sbjct: 153 VLDQACLEIYKVGKAKDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLN 212

Query: 144 KSGRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVA 203
           K+GRL+ VYI T   VLI+V P  +IP   + F  +M +LL  LSI++    +KLL+V+ 
Sbjct: 213 KAGRLQ-VYIHTAKKVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNGNEKLLKVIK 272

Query: 204 NPVTKYLPPSSPKIGLSFSSEKAVELREHVSGINRDEDVVFVVGVMAHGKIECD--YIED 263
           NPVT YLPP+  K  LSF +   V  R+++  +  ++ V   +G MAHG  +    ++++
Sbjct: 273 NPVTDYLPPNCRKATLSFDA-PTVPPRKYLETLQPNQSVCIAIGAMAHGPDDFSDGWVDE 332

Query: 264 LVSVSSFHLSAAMCLRIILIAME 281
            +S+S + LSA++     L +ME
Sbjct: 333 KISISDYPLSASIACSKFLHSME 353

[Close]

BLAST of Spo18300.1 vs. TAIR (Arabidopsis)
Match: AT3G57000.1 (nucleolar essential protein-related)

HSP 1 Score: 214.5 bits (545), Expect = 8.300e-56
Identity = 118/267 (44.19%), Postives = 176/267 (65.92%), Query Frame = 1


		  
Query: 34  ELGEKELNSIQKFSHPTVNEVKNEDDEVNLC------------GIPLSLTCKDAGAGAGV 93
           E  +K   S +K    + +  + ++DE  +             GIP+ L   +    +G+
Sbjct: 33  EQKQKARESSKKAKKESTSRAEEDNDEEEVTVEATAAAEDIVGGIPIVLNAPNKEK-SGI 92

Query: 94  TFVLEKASLTLANIGKRYQILNSNEHASYLRKKKMDPYKYRPDIVHEALNDIMNSRLSKS 153
            FVLEKASL +A +GK YQ+LNS++HA++L+K   +P  YRPDI H+AL  I++S ++K+
Sbjct: 93  VFVLEKASLEVAKVGKTYQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKA 152

Query: 154 GRLKAVYIRTEDGVLIKVEPYAKIPSDLESFCSMMAELLQTLSIKAKGNRKKLLRVVANP 213
           GRLKAVY+RTE GVL +V+P+ +IP   + F  +M +LLQ LSI A  +R+KLLR V NP
Sbjct: 153 GRLKAVYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNP 212

Query: 214 VTK-YLPPSSPKIGLSFSSEKAVELREHVSGI-NRDEDVVFVVGVMAHGKIECDYIEDLV 273
           + + +LP +S +IG S SSEK V +++H++ + + D D VFVVG MAHGKI+C+YI++ V
Sbjct: 213 IEEHHLPVNSHRIGFSHSSEKLVNMQKHLATVCDDDRDTVFVVGAMAHGKIDCNYIDEFV 272

Query: 274 SVSSFHLSAAMCLRIILIAMERKWSIL 287
           SVS + LSAA C+  I  A+   W+I+
Sbjct: 273 SVSEYPLSAAYCISRICEALATNWNII 298

The following BLAST results are available for this feature:

BLAST of Spo18300.1 vs. NCBI nr
BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
BLAST of Spo18300.1 vs. TAIR (Arabidopsis)

BLAST of Spo18300.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902099700\|gb\|KNA03487.1\|	1.6e-154	99.6	hypothetical protein SOVF_2085...	[more]
gi\|902196961\|gb\|KNA13280.1\|	4.2e-142	93.3	hypothetical protein SOVF_1181...	[more]
gi\|731334780\|ref\|XP_010678392.1\|	1.6e-104	71.9	PREDICTED: ribosomal RNA small...	[more]
gi\|645224116\|ref\|XP_008218955.1\|	1.5e-67	52.8	PREDICTED: ribosomal RNA small...	[more]
gi\|1012346611\|gb\|KYP57803.1\|	2.6e-67	58.3	hypothetical protein KK1_00408...	[more]

BLAST of Spo18300.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q883_SPIOL	1.1e-154	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9R187_SPIOL	2.9e-142	93.3	Uncharacterized protein OS=Spi...	[more]
A0A151SSN0_CAJCA	1.8e-67	58.3	Uncharacterized protein OS=Caj...	[more]
A0A151QPM5_CAJCA	2.0e-66	62.1	Uncharacterized protein OS=Caj...	[more]
A0A061G688_THECC	7.6e-66	50.8	Nucleolar essential protein-re...	[more]

BLAST of Spo18300.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
NEP1_MOUSE	1.5e-38	42.1	Ribosomal RNA small subunit me...	[more]
NEP1_HUMAN	2.1e-37	40.6	Ribosomal RNA small subunit me...	[more]
NEP1_CAEEL	9.9e-35	39.4	Ribosomal RNA small subunit me...	[more]
NEP1_DROME	4.6e-32	35.5	Ribosomal RNA small subunit me...	[more]
NEP1_SCHPO	1.1e-28	36.9	Ribosomal RNA small subunit me...	[more]

BLAST of Spo18300.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G57000.1	8.3e-56	44.1	nucleolar essential protein-re...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PANTHER	PTHR12636	NEP1/MRA1	coord: 31..286 score: 1.2
IPR005304	Ribosomal biogenesis, methyltransferase, EMG1/NEP1	PFAM	PF03587	EMG1	coord: 83..280 score: 1.9
None	No IPR available	PANTHER	PTHR12636:SF5	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE NEP1	coord: 31..286 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
molecular_function	GO:0008168	methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01801	0.67	Barchart \| Table
Spo09219	0.66	Barchart \| Table