Spo18312 (gene)

Overview
NameSpo18312
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGibberellin-regulated protein 1 (GAST1 protein homolog 1) (Precursor)
LocationSuper_scaffold_58 : 66466 .. 69578 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCACATTTTTCTTTTATAAATAAATTTGTATATTTGGGTGTGCTTTCAATTGGCAGCTGTATCCTTACTTGCATGCGCATATTAGCATCTCTTTTTTCACTATAAATACAACACCTTCCTACATTTCTCTTACTCACTCCAAAATTAATTAATCACTTCCCCTAAAAGTAGTATTATTAGCAAGCTATGGCCATTTCCAAGCTTTTCGTTGCTACTTTTGTCCTCTCTTTTCTTCTTCTCCATGTTGTTGAAGCTCACCAAGTGGTAAGATTATTATCGTCCTCCTAGTATGAACGTTAATTATGTGTTCCGTTTTTAGTTTTATATATCATATATCATATATATACCTGAGAATCAAGCAACACTTATCCAAGTATATGTTTTATCGTATAAAACATAACCTCAAGGTCATGAGATCAGACCTCACTCATAATTCTTGAAAGGTGAAAATTCTGTTTTCTTACCTCTCGCTAAGTCCCTAGTTTTCCCAAGAAAGTGTCGTTATTTTAACTTACCACCCGTGCACATAGGAATTCTTCCATCTCTTTTGTGATTTCTCTAATATTTTCTTTTTGTAGCCTTGGTATATCCTATATATCTATCCAACAATTGCTTGCAAAATCAAAACACTTCTCTTATAAGGGAGTTTATCCTGTATATACGAAGTACAAGCTATGTTTTACATGTTGTTAACATTTACTCCTATTTATACAAATATTAAGATAAGTGAGACAGAATGTTGGTGTCGCCACTATAAGAAATTATATCATTAACGACGGGAAATCTCGCCACTAAAGTCCAATAATCGTTGATTAATGACGGGATTTTTTGTCTGGAACCCGTCATAAAAGGGTGCCGTCGTTAATTAATGGGAAATCCCGCCATTTACCCGTCGTAAAAGACATTTGTGACGGTTGTTCCCGTCTTTGTTTGGTTGTTAGCCCCGTCGCAAAACGCTTTTGCGACGGGATTTTTAACCCGTCGTAATTAGGTTGTCGTTAAAGATACAAATTCTTGTAGTGCGCCGTGTGGTGAATGGGTGTATGTAAAATTTGAATAAAGTAAAAATGTGTGTTAAACAATGTTAAATGTTTTTGGATAGGAGGGATAGTTAGTAAAGGGGTAACGAAAAATAGAACGGAGTAAACTTGTTAATAACTTAAAATTTTGACTAAAACAGAACTTAGTAGCAACTTTCAAAAATTAGGGTACATAATATAGAGGATTTTCATGCGGCTTTCTTATTTTATTAAATTAGATTAACTTTTTCTTTTCTTTTTATGAGGTAAAAACTCTTATCTACTCCATATGGTTATAAAATTCCTAGATCGATCTAGCATATATGTATGTGTGATTTGAATTTCAAAAAATATACATGACATCCAATGTAAAAGACACATACAATACACATTAAAGACATTTTAAGCATTTTGGATACACTAATTGTTTGGGCCCATATACATGGTCAGCCCAACTCGATATAAAAAGATGAAAATGCCCTTAAGTCTCTTGAATCAAGGAGGATAGCTGTTCATTAGAAGTAGACGTAATTACAGAATTACTCCCGTGTAATCATATAAATACTCTGTTGTAATCAATTACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCACAGAGTTTAAGGAACTTGAATTGGCTTATTTAATTTAGTAGGTAGTAGTTGATATTGGGGTATTATTTTAATGTAGTTAGTGGGAGGTGGGTTAAGAGGTGGGGTTGGGGGAGAGTAGGGGTTGAATTTGTAATTAATTTTTGTATGGAGTAAGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGAAATAATATAATATTGTTAAAATATTTCCATTTTTAGAAACATGTCAAGTATTAAGGGACGGCCCGATAAGGAAAACAGGTCAAGTATTCCGGGACGGAGGGAGTAAAAAGGCTATCTAATCATTACCTAAAACAGCAAATCAGTTATTCTCTCTCTAGTCCTTCTCACATAACAATCAGTTATCCAATTTAAGCATTATACGAAGGTTACTCGGACATATTCAGAAACCGCTTAACGGTAATACAGGTGGTCGACTAAAAGGAGATAACGGTCGAACACGTCATCGGTTAAGCTAATCCCAAAATATTATCTTTATAGTTTCTGGCGCAGAAACACTAATAATTCATCAAGGGAAACAAACATAATTTAACAAAAAGAAATACAAATATTACAATAGTTTGGTATTGTTGTTTGTTTTGTCTTATTCTTAGTACCTCCCTTGTCCATGATGAGTAGACATCAACCATTAATTAATTATATTTGTTGCTACTCAAAACTCCAAAGAATATAATGCCTTAATAGGTCATGACTCATGACCCTTGTGGTAATCAATTCTTTTATAGTATTCCTACAAAATTAGCTAATCACAAATTCACAATCATTCTTGTCATGCAGATTGAGAGTAACGGTCCAAAGAGGTCCCTCCTTGGCACAATTAGTAAGTACTCCGATCATCTGTTTCTTTTCCGTTTGTTAATGAATAATTCAGATGATTGATAACAAAAAGGAAATGGGATATGAAGTCGATATAGCTATAACAAATCATTAATGTATGGAATAATATGGATGTAGATTGCGGAGCAGCATGTGTAGCTAGGTGCCGATTAAGCAGACGGCCAAATCTATGCCACAGGGCATGTGGAACCTGTTGTGCTCGTTGTGGGTGTGTTCCACCAGGTACTTCCGGTAACCAAGAAATGTGCGCTTGCTACTACAACCAGACCACCCACGGTGGAAAACGCAAGTGCCCTTAATTAATTAATACAAAATTTACTACTCAACTCCTATGTAATTTAGTTCCTGTTTGTATGTTTTAGTTCTTCTTTTGCCAGTGTCAAAAAAAAAAAAAAAACCCGACCTCTAAATATTTCATTCTACTATATTTGTCATTTGTCATGAATTATATCTTTGTCATATGTATGCAATACTATATTATTGTACATTCACTTTTGTGAATCATGAATATAATAAAAGGGTCCTTAATATATTTCTTGTAAATTAGCCTTCAATTCTTAACATTCTATATATTGTAGTTCGGCTCATTCCTTATGATCCTACTACTTAT

mRNA sequence

ACTCACATTTTTCTTTTATAAATAAATTTGTATATTTGGGTGTGCTTTCAATTGGCAGCTGTATCCTTACTTGCATGCGCATATTAGCATCTCTTTTTTCACTATAAATACAACACCTTCCTACATTTCTCTTACTCACTCCAAAATTAATTAATCACTTCCCCTAAAAGTAGTATTATTAGCAAGCTATGGCCATTTCCAAGCTTTTCGTTGCTACTTTTGTCCTCTCTTTTCTTCTTCTCCATGTTGTTGAAGCTCACCAAGTGATTGAGAGTAACGGTCCAAAGAGGTCCCTCCTTGGCACAATTAATTGCGGAGCAGCATGTGTAGCTAGGTGCCGATTAAGCAGACGGCCAAATCTATGCCACAGGGCATGTGGAACCTGTTGTGCTCGTTGTGGGTGTGTTCCACCAGGTACTTCCGGTAACCAAGAAATGTGCGCTTGCTACTACAACCAGACCACCCACGGTGGAAAACGCAAGTGCCCTTAATTAATTAATACAAAATTTACTACTCAACTCCTATGTAATTTAGTTCCTGTTTGTATGTTTTAGTTCTTCTTTTGCCAGTGTCAAAAAAAAAAAAAAAACCCGACCTCTAAATATTTCATTCTACTATATTTGTCATTTGTCATGAATTATATCTTTGTCATATGTATGCAATACTATATTATTGTACATTCACTTTTGTGAATCATGAATATAATAAAAGGGTCCTTAATATATTTCTTGTAAATTAGCCTTCAATTCTTAACATTCTATATATTGTAGTTCGGCTCATTCCTTATGATCCTACTACTTAT

Coding sequence (CDS)

ATGGCCATTTCCAAGCTTTTCGTTGCTACTTTTGTCCTCTCTTTTCTTCTTCTCCATGTTGTTGAAGCTCACCAAGTGATTGAGAGTAACGGTCCAAAGAGGTCCCTCCTTGGCACAATTAATTGCGGAGCAGCATGTGTAGCTAGGTGCCGATTAAGCAGACGGCCAAATCTATGCCACAGGGCATGTGGAACCTGTTGTGCTCGTTGTGGGTGTGTTCCACCAGGTACTTCCGGTAACCAAGAAATGTGCGCTTGCTACTACAACCAGACCACCCACGGTGGAAAACGCAAGTGCCCTTAA

Protein sequence

MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCHRACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18312.1Spo18312.1mRNA


Homology
[Close]
BLAST of Spo18312.1 vs. NCBI nr
Match: gi|902165432|gb|KNA07106.1| (hypothetical protein SOVF_174960 [Spinacia oleracea])

HSP 1 Score: 211.5 bits (537), Expect = 7.000e-52
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH
Sbjct: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 100
[Close]
BLAST of Spo18312.1 vs. NCBI nr
Match: gi|731360499|ref|XP_010691856.1| (PREDICTED: gibberellin-regulated protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 190.3 bits (482), Expect = 1.700e-45
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAI KLF+AT V+SFLLLHV EA +VIES+GPKRSLLG INCGAACVARCRLSRRPNLCH
Sbjct: 1   MAIPKLFIATLVVSFLLLHVAEAQEVIESSGPKRSLLG-INCGAACVARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. NCBI nr
Match: gi|870847919|gb|KMT00253.1| (hypothetical protein BVRB_1g016120 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.0 bits (471), Expect = 3.100e-44
Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAI KLF+AT V+SFLLLHV EA +VIES+GPKRSLLG INCGA+CVARCRLSRRP LCH
Sbjct: 1   MAIPKLFIATLVVSFLLLHVAEAQEVIESSGPKRSLLG-INCGASCVARCRLSRRPKLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQEQCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. NCBI nr
Match: gi|756179890|gb|AJK93580.1| (putative gibberellin-regulated protein 1 [Suaeda glauca])

HSP 1 Score: 181.8 bits (460), Expect = 5.900e-43
Identity = 84/100 (84.00%), Postives = 94/100 (94.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISKL +ATFVLSFLLLHV +A +V +++GPKR+LLG I+CG AC+ARCRLSRRPNLCH
Sbjct: 1   MAISKLLIATFVLSFLLLHVAQAQEVTKNHGPKRALLG-IDCGGACMARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. NCBI nr
Match: gi|731360493|ref|XP_010691853.1| (PREDICTED: gibberellin-regulated protein 1-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 179.1 bits (453), Expect = 3.800e-42
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISK F+A FVLSFLL H +EA ++IE+ GPKR+LLG ++CGAACVARCRLS RPNLCH
Sbjct: 1   MAISKRFIAAFVLSFLLFHAIEAQEMIENKGPKRTLLG-VDCGAACVARCRLSSRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+C CYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCPCYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174960 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 4.800e-52
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH
Sbjct: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 100
[Close]
BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFU7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016120 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.200e-45
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAI KLF+AT V+SFLLLHV EA +VIES+GPKRSLLG INCGAACVARCRLSRRPNLCH
Sbjct: 1   MAIPKLFIATLVVSFLLLHVAEAQEVIESSGPKRSLLG-INCGAACVARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJK3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016120 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-44
Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAI KLF+AT V+SFLLLHV EA +VIES+GPKRSLLG INCGA+CVARCRLSRRP LCH
Sbjct: 1   MAIPKLFIATLVVSFLLLHVAEAQEVIESSGPKRSLLG-INCGASCVARCRLSRRPKLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQEQCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AZ92_9CARY (Suaeda glauca putative gibberellin-regulated protein 1 mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.100e-43
Identity = 84/100 (84.00%), Postives = 94/100 (94.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISKL +ATFVLSFLLLHV +A +V +++GPKR+LLG I+CG AC+ARCRLSRRPNLCH
Sbjct: 1   MAISKLLIATFVLSFLLLHVAQAQEVTKNHGPKRALLG-IDCGGACMARCRLSRRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+CACYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCACYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016100 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.700e-42
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISK F+A FVLSFLL H +EA ++IE+ GPKR+LLG ++CGAACVARCRLS RPNLCH
Sbjct: 1   MAISKRFIAAFVLSFLLFHAIEAQEMIENKGPKRTLLG-VDCGAACVARCRLSSRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARCGCVPPGTSGNQE+C CYYNQTTHGGKRKCP
Sbjct: 61  RACGTCCARCGCVPPGTSGNQELCPCYYNQTTHGGKRKCP 99
[Close]
BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 3.700e-29
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISK  +A+ ++S L+L +V+A   +E++  K      I+CG+ACVARCRLSRRP LCH
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCC RC CVPPGT GN + C CY + TTHGG+RKCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
[Close]
BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.000e-26
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQV--IESNGPKRSLLG--TINCGAACVARCRLSRRP 60
           MAISK   A+ +LS LLL  V++ Q   + SN    +      I+CG AC ARCRLS RP
Sbjct: 1   MAISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRP 60

Query: 61  NLCHRACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
            LC+RACGTCCARC CVPPGTSGN E C CY + TTHG KRKCP
Sbjct: 61  RLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
[Close]
BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Match: GASAB_ARATH (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana GN=GASA11 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.300e-25
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MA+ ++ +A+ ++S L+L  V A  V  ++ PK      I+C + C  RC LS RPNLCH
Sbjct: 1   MAVFRVLLASLLISLLVLDFVHADMVTSNDAPK------IDCNSRCQERCSLSSRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARC CV PGTSGN + C CY + TTHGG+RKCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94
[Close]
BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Match: GASA9_ARATH (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.900e-19
Identity = 50/109 (45.87%), Postives = 58/109 (53.21%), Query Frame = 1 

		  

Query: 10  TFVLSFLLLHVVEAHQVIESNGPKRSLLGT------------------INCGAACVARCR 69
           T ++SFLLL  V A     SN    S+  T                  INCG AC  RC 
Sbjct: 11  TLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCS 70

Query: 70  LSRRPNLCHRACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
            + R  +CHRACG+CCA+C CVPPGTSGN   C CY +  THG K KCP
Sbjct: 71  KTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
[Close]
BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.300e-17
Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 1 

		  

Query: 6   LFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCHRACGT 65
           L +  F L+   LHV  A       G  +     I+CG  C  RC  S RPNLC RAC +
Sbjct: 10  LLLILFCLTTFELHVHAAEDSQVGEGVVK-----IDCGGRCKGRCSKSSRPNLCLRACNS 69

Query: 66  CCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           CC RC CVPPGT+GN  +C CY + TT GG+ KCP
Sbjct: 70  CCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
[Close]
BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Match: AT1G75750.1 (GAST1 protein homolog 1)

HSP 1 Score: 128.6 bits (322), Expect = 2.100e-30
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MAISK  +A+ ++S L+L +V+A   +E++  K      I+CG+ACVARCRLSRRP LCH
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCC RC CVPPGT GN + C CY + TTHGG+RKCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
[Close]
BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Match: AT2G18420.1 (Gibberellin-regulated family protein)

HSP 1 Score: 115.5 bits (288), Expect = 1.800e-26
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 1 

		  

Query: 1   MAISKLFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCH 60
           MA+ ++ +A+ ++S L+L  V A  V  ++ PK      I+C + C  RC LS RPNLCH
Sbjct: 1   MAVFRVLLASLLISLLVLDFVHADMVTSNDAPK------IDCNSRCQERCSLSSRPNLCH 60

Query: 61  RACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           RACGTCCARC CV PGTSGN + C CY + TTHGG+RKCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94
[Close]
BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Match: AT1G22690.1 (Gibberellin-regulated family protein)

HSP 1 Score: 94.7 bits (234), Expect = 3.300e-20
Identity = 50/109 (45.87%), Postives = 58/109 (53.21%), Query Frame = 1 

		  

Query: 10  TFVLSFLLLHVVEAHQVIESNGPKRSLLGT------------------INCGAACVARCR 69
           T ++SFLLL  V A     SN    S+  T                  INCG AC  RC 
Sbjct: 11  TLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCS 70

Query: 70  LSRRPNLCHRACGTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
            + R  +CHRACG+CCA+C CVPPGTSGN   C CY +  THG K KCP
Sbjct: 71  KTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
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BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Match: AT4G09600.1 (GAST1 protein homolog 3)

HSP 1 Score: 89.0 bits (219), Expect = 1.800e-18
Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 1 

		  

Query: 6   LFVATFVLSFLLLHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCHRACGT 65
           L +  F L+   LHV  A       G  +     I+CG  C  RC  S RPNLC RAC +
Sbjct: 10  LLLILFCLTTFELHVHAAEDSQVGEGVVK-----IDCGGRCKGRCSKSSRPNLCLRACNS 69

Query: 66  CCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
           CC RC CVPPGT+GN  +C CY + TT GG+ KCP
Sbjct: 70  CCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
[Close]
BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Match: AT4G09610.1 (GAST1 protein homolog 2)

HSP 1 Score: 86.3 bits (212), Expect = 1.200e-17
Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 1 

		  

Query: 6   LFVATFVLSFLL--LHVVEAHQVIESNGPKRSLLGTINCGAACVARCRLSRRPNLCHRAC 65
           +F +T VL  ++  L   E H            +  I+CG  C  RC  S R  LC RAC
Sbjct: 3   VFRSTLVLLLIIVCLTTYELHVHAADGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLRAC 62

Query: 66  GTCCARCGCVPPGTSGNQEMCACYYNQTTHGGKRKCP 101
            +CC+RC CVPPGTSGN  +C CY + TTHGG+ KCP
Sbjct: 63  NSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
The following BLAST results are available for this feature:
BLAST of Spo18312.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902165432|gb|KNA07106.1|7.0e-52100.hypothetical protein SOVF_1749... [more]
gi|731360499|ref|XP_010691856.1|1.7e-4590.0PREDICTED: gibberellin-regulat... [more]
gi|870847919|gb|KMT00253.1|3.1e-4488.0hypothetical protein BVRB_1g01... [more]
gi|756179890|gb|AJK93580.1|5.9e-4384.0putative gibberellin-regulated... [more]
gi|731360493|ref|XP_010691853.1|3.8e-4282.0PREDICTED: gibberellin-regulat... [more]
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BLAST of Spo18312.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QKM5_SPIOL4.8e-52100.Uncharacterized protein OS=Spi... [more]
A0A0J8BFU7_BETVU1.2e-4590.0Uncharacterized protein OS=Bet... [more]
A0A0J8BJK3_BETVU2.2e-4488.0Uncharacterized protein OS=Bet... [more]
A0A0C5AZ92_9CARY4.1e-4384.0Suaeda glauca putative gibbere... [more]
A0A0J8BFU2_BETVU2.7e-4282.0Uncharacterized protein OS=Bet... [more]
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BLAST of Spo18312.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GASA1_ARATH3.7e-2960.0Gibberellin-regulated protein ... [more]
SNAK2_SOLTU1.0e-2659.6Snakin-2 OS=Solanum tuberosum ... [more]
GASAB_ARATH3.3e-2554.0Gibberellin-regulated protein ... [more]
GASA9_ARATH5.9e-1945.8Gibberellin-regulated protein ... [more]
GASA3_ARATH3.3e-1747.3Gibberellin-regulated protein ... [more]
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BLAST of Spo18312.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G75750.12.1e-3060.0GAST1 protein homolog 1[more]
AT2G18420.11.8e-2654.0Gibberellin-regulated family p... [more]
AT1G22690.13.3e-2045.8Gibberellin-regulated family p... [more]
AT4G09600.11.8e-1847.3GAST1 protein homolog 3[more]
AT4G09610.11.2e-1745.3GAST1 protein homolog 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 41..100
score: 3.8
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 1..100
score: 7.8
NoneNo IPR availablePANTHERPTHR23201:SF2GIBBERELLIN-REGULATED PROTEIN 1-RELATEDcoord: 1..100
score: 7.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0006103 2-oxoglutarate metabolic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006557 S-adenosylmethioninamine biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006597 spermine biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0009821 alkaloid biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0030163 protein catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0008152 metabolic process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016573 histone acetylation
biological_process GO:0009553 embryo sac development
biological_process GO:0010227 floral organ abscission
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009954 proximal/distal pattern formation
biological_process GO:0048439 flower morphogenesis
biological_process GO:0009555 pollen development
biological_process GO:0048573 photoperiodism, flowering
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005634 nucleus
molecular_function GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005267 potassium channel activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0004014 adenosylmethionine decarboxylase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression