Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGATCAATTAGTACAAGTAGCGACAATAGTTGATCGAATTATTGGGGAAAAAATCCTTAGATCAAAAAACATAAAATTAGATATTGATGAAAGCGCGCAATTTAAGGGGAGAGGATAGAGGTAGCATTGCCTTCTTCACCACCTATCGACCACCGGTAGCATTAGACATTTACTCATGTCCTCTTTCACCGACCACAAATCCACCTGAGGAGCTTCATCTTACCGATGGAGTGTCGTACAACTCAAATGCTCGAGAAATTCCACCGGAAGCACTTAAACCGATTCTCAAACGAATCCACGACAAACATCCTAACTTGCATTTCAATGGCGATGATGTTGATTCAGGTTGTGTTACGGGTATGGTTTTTATATCGGAGCGTACAAACGACTTGGAGACTATTCATATCGCTATTAGATCTAGCGACAGTGGAATACTTAAAGTGTTTAACTTTGCTCAACTGTTTGGGACGTTCGATGGTGTTCGGATGGAAGACAGTGGTTGTTTTGCTGGAAACAGAAGTCAATATCTTGTTTATGTTACTACTAAGGATGCTTCGCACCATCGTCGTCAGCCTTGGACTTCTCTTTATAGAACTTGTCTTAACACTGCCCAAACTCAACGCCTAACCCCATTCTGTATGTCTTTTTCCTCCTTCAGCTCCTCACTCTTTCATTATTTTCTTTATTTATCGATTCTTTTTTATTTATGGCTATGCTAGCTGCTTTTTGTTAGATACTTGCCAAGATTCTATCACTTTGTAATACATTAAGGCTCGGTTTGGTAGGATGTAAAATGATTTTCCATGAAAAACATTTTTCAAGGAAAAACATAATTCCAAACTAGTTTCCTTTGTTTGGTACCTTAAAGGAAAATGGGAGAAGATGGTAAAGATTGAAGGTAACACTTTGACAGGGACAGAACTGGTATTTCGGTCAACAAGAGATCATGTTGAGAGTGGTGGAAGATACAAGAACTTATACATAATGGAGAATGCAAATAAGGGAGAGTTCGAAGGCGGTGAAATGAGAAGATTAACAGAAGGAAAATGGATTGATACACAATGCAAATGGTCTCCTAAAAACGATTGGATAGTATTCTCTTCAAATCGTGACAACCCTGAAGGTGATCGTAAAGATGACAAGAATGTTAACTTTGGATACTTCTCAGTATATCTAGTAAAGGCTAATGATCCTGACGTTTTAGTACGAGTGATTTCAAGTGCAAACGATCTTTCAGGGCATGTAAACCACCCTTTCTTTAGTCCTGATGGAAGGAGCATCGTCGTCACATCGGATCTTGCTGCTGTTTCAGCTGATCCTATGTCGATGCCTCTCTTCCTGCATTCAGCTAGACCTTATGGAGATATCTTTACTATTGACATCGATCCTGATGACATTGAAAAGAACAAGGATTTGAACAAGTTCAACCGTATTACTCATAGTAGGTATGAGAATGCAACTGGTACTTGGACTAAATTCTCAACTGCAAATCCTTCAAATACATTGAATCAGTTTATAAGGCTCCCTCTGAAAAATCAAATCGTTTCAAGAAATAAAGATTGAAGCCGGCCCGGCCCAGTGCTCAATCGTGGTACATCAACTTATGCATTTACTAGTTTTTTTTAATCTAAAATTTAGGTTTGTTAATTAGTGGCTTTTCGTTTTCCTATGTAATTTTCGTTTTTTTTTTCGACTTTTTTAATTTGGGGATTTTTTTAATTTCAGTTTCGCTTTTTAATTTGATTTTTCGTTTTTTATTTTGATTTTCGTTTTTTAATCTGATTTCATTTTTCTTATGTAATTTTTCGTTTTTTTAGATTTGAATTATTTCAATCAATATTTTGGGAAATAAATCTTCAGAGTTGATGGGTTTTTCAATTCTTGTTGATGGATTTTTGTTTTCAATTCTGTCTCTGTGTGTTATTTTTCAATTCTGTTTTCAACTCTTGTTAGTGGGTATTTTTTCTTCTTTTGTAATCAGAGTTGAGAAGAATAAGCGTGAATTTGGTATGCATGTTCCAGAAGAGTACATTACTTGATTGTTTTTGGGATCTACTATCTGAAGTTTGATTTGAAGATAAACCACCACAACAAACTGAGAGTGTGACATTCAGCATCACATTGTGATATGTAAATTGCAAAATTTCCCTTATGAAATTTGGATGTAAATCATTAATTTTCTTGTTATCGTGGTATATATGTAGTGTGTTTGTATTCGTTTGATTCACGAAATACCACCCA CTGATCAATTAGTACAAGTAGCGACAATAGTTGATCGAATTATTGGGGAAAAAATCCTTAGATCAAAAAACATAAAATTAGATATTGATGAAAGCGCGCAATTTAAGGGGAGAGGATAGAGGTAGCATTGCCTTCTTCACCACCTATCGACCACCGGTAGCATTAGACATTTACTCATGTCCTCTTTCACCGACCACAAATCCACCTGAGGAGCTTCATCTTACCGATGGAGTGTCGTACAACTCAAATGCTCGAGAAATTCCACCGGAAGCACTTAAACCGATTCTCAAACGAATCCACGACAAACATCCTAACTTGCATTTCAATGGCGATGATGTTGATTCAGGTTGTGTTACGGGTATGGTTTTTATATCGGAGCGTACAAACGACTTGGAGACTATTCATATCGCTATTAGATCTAGCGACAGTGGAATACTTAAAGTGTTTAACTTTGCTCAACTGTTTGGGACGTTCGATGGTGTTCGGATGGAAGACAGTGGTTGTTTTGCTGGAAACAGAAGTCAATATCTTGTTTATGTTACTACTAAGGATGCTTCGCACCATCGTCGTCAGCCTTGGACTTCTCTTTATAGAACTTGTCTTAACACTGCCCAAACTCAACGCCTAACCCCATTCTGGACAGAACTGGTATTTCGGTCAACAAGAGATCATGTTGAGAGTGGTGGAAGATACAAGAACTTATACATAATGGAGAATGCAAATAAGGGAGAGTTCGAAGGCGGTGAAATGAGAAGATTAACAGAAGGAAAATGGATTGATACACAATGCAAATGGTCTCCTAAAAACGATTGGATAGTATTCTCTTCAAATCGTGACAACCCTGAAGGTGATCGTAAAGATGACAAGAATGTTAACTTTGGATACTTCTCAGTATATCTAGTAAAGGCTAATGATCCTGACGTTTTAGTACGAGTGATTTCAAGTGCAAACGATCTTTCAGGGCATGTAAACCACCCTTTCTTTAGTCCTGATGGAAGGAGCATCGTCGTCACATCGGATCTTGCTGCTGTTTCAGCTGATCCTATGTCGATGCCTCTCTTCCTGCATTCAGCTAGACCTTATGGAGATATCTTTACTATTGACATCGATCCTGATGACATTGAAAAGAACAAGGATTTGAACAAGTTCAACCGTATTACTCATAGTAGGTATGAGAATGCAACTGGTACTTGGACTAAATTCTCAACTGCAAATCCTTCAAATACATTGAATCAGTTTATAAGGCTCCCTCTGAAAAATCAAATCGTTTCAAGAAATAAAGATTGAAGCCGGCCCGGCCCAGTGCTCAATCGTGGTACATCAACTTATGCATTTACTAGTTTTTTTTAATCTAAAATTTAGGTTTGTTAATTAGTGGCTTTTCGTTTTCCTATGTAATTTTCGTTTTTTTTTTCGACTTTTTTAATTTGGGGATTTTTTTAATTTCAGTTTCGCTTTTTAATTTGATTTTTCGTTTTTTATTTTGATTTTCGTTTTTTAATCTGATTTCATTTTTCTTATGTAATTTTTCGTTTTTTTAGATTTGAATTATTTCAATCAATATTTTGGGAAATAAATCTTCAGAGTTGATGGGTTTTTCAATTCTTGTTGATGGATTTTTGTTTTCAATTCTGTCTCTGTGTGTTATTTTTCAATTCTGTTTTCAACTCTTGTTAGTGGGTATTTTTTCTTCTTTTGTAATCAGAGTTGAGAAGAATAAGCGTGAATTTGGTATGCATGTTCCAGAAGAGTACATTACTTGATTGTTTTTGGGATCTACTATCTGAAGTTTGATTTGAAGATAAACCACCACAACAAACTGAGAGTGTGACATTCAGCATCACATTGTGATATGTAAATTGCAAAATTTCCCTTATGAAATTTGGATGTAAATCATTAATTTTCTTGTTATCGTGGTATATATGTAGTGTGTTTGTATTCGTTTGATTCACGAAATACCACCCA ATGAAAGCGCGCAATTTAAGGGGAGAGGATAGAGGTAGCATTGCCTTCTTCACCACCTATCGACCACCGGTAGCATTAGACATTTACTCATGTCCTCTTTCACCGACCACAAATCCACCTGAGGAGCTTCATCTTACCGATGGAGTGTCGTACAACTCAAATGCTCGAGAAATTCCACCGGAAGCACTTAAACCGATTCTCAAACGAATCCACGACAAACATCCTAACTTGCATTTCAATGGCGATGATGTTGATTCAGGTTGTGTTACGGGTATGGTTTTTATATCGGAGCGTACAAACGACTTGGAGACTATTCATATCGCTATTAGATCTAGCGACAGTGGAATACTTAAAGTGTTTAACTTTGCTCAACTGTTTGGGACGTTCGATGGTGTTCGGATGGAAGACAGTGGTTGTTTTGCTGGAAACAGAAGTCAATATCTTGTTTATGTTACTACTAAGGATGCTTCGCACCATCGTCGTCAGCCTTGGACTTCTCTTTATAGAACTTGTCTTAACACTGCCCAAACTCAACGCCTAACCCCATTCTGGACAGAACTGGTATTTCGGTCAACAAGAGATCATGTTGAGAGTGGTGGAAGATACAAGAACTTATACATAATGGAGAATGCAAATAAGGGAGAGTTCGAAGGCGGTGAAATGAGAAGATTAACAGAAGGAAAATGGATTGATACACAATGCAAATGGTCTCCTAAAAACGATTGGATAGTATTCTCTTCAAATCGTGACAACCCTGAAGGTGATCGTAAAGATGACAAGAATGTTAACTTTGGATACTTCTCAGTATATCTAGTAAAGGCTAATGATCCTGACGTTTTAGTACGAGTGATTTCAAGTGCAAACGATCTTTCAGGGCATGTAAACCACCCTTTCTTTAGTCCTGATGGAAGGAGCATCGTCGTCACATCGGATCTTGCTGCTGTTTCAGCTGATCCTATGTCGATGCCTCTCTTCCTGCATTCAGCTAGACCTTATGGAGATATCTTTACTATTGACATCGATCCTGATGACATTGAAAAGAACAAGGATTTGAACAAGTTCAACCGTATTACTCATAGTAGGTATGAGAATGCAACTGGTACTTGGACTAAATTCTCAACTGCAAATCCTTCAAATACATTGAATCAGTTTATAAGGCTCCCTCTGAAAAATCAAATCGTTTCAAGAAATAAAGATTGA MKARNLRGEDRGSIAFFTTYRPPVALDIYSCPLSPTTNPPEELHLTDGVSYNSNAREIPPEALKPILKRIHDKHPNLHFNGDDVDSGCVTGMVFISERTNDLETIHIAIRSSDSGILKVFNFAQLFGTFDGVRMEDSGCFAGNRSQYLVYVTTKDASHHRRQPWTSLYRTCLNTAQTQRLTPFWTELVFRSTRDHVESGGRYKNLYIMENANKGEFEGGEMRRLTEGKWIDTQCKWSPKNDWIVFSSNRDNPEGDRKDDKNVNFGYFSVYLVKANDPDVLVRVISSANDLSGHVNHPFFSPDGRSIVVTSDLAAVSADPMSMPLFLHSARPYGDIFTIDIDPDDIEKNKDLNKFNRITHSRYENATGTWTKFSTANPSNTLNQFIRLPLKNQIVSRNKD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18321.1 vs. NCBI nr
Match: gi|902168006|gb|KNA07453.1| (hypothetical protein SOVF_171720 [Spinacia oleracea]) HSP 1 Score: 446.8 bits (1148), Expect = 3.900e-122 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 1
BLAST of Spo18321.1 vs. NCBI nr
Match: gi|731330258|ref|XP_010676033.1| (PREDICTED: uncharacterized protein LOC104891943 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 318.9 bits (816), Expect = 1.200e-83 Identity = 155/206 (75.24%), Postives = 180/206 (87.38%), Query Frame = 1
BLAST of Spo18321.1 vs. NCBI nr
Match: gi|255566348|ref|XP_002524160.1| (PREDICTED: uncharacterized protein LOC8274807 [Ricinus communis]) HSP 1 Score: 286.2 bits (731), Expect = 8.900e-74 Identity = 134/206 (65.05%), Postives = 164/206 (79.61%), Query Frame = 1
BLAST of Spo18321.1 vs. NCBI nr
Match: gi|255566336|ref|XP_002524154.1| (PREDICTED: uncharacterized protein LOC8274801 [Ricinus communis]) HSP 1 Score: 284.6 bits (727), Expect = 2.600e-73 Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1
BLAST of Spo18321.1 vs. NCBI nr
Match: gi|703122717|ref|XP_010102639.1| (hypothetical protein L484_010931 [Morus notabilis]) HSP 1 Score: 279.3 bits (713), Expect = 1.100e-71 Identity = 133/201 (66.17%), Postives = 160/201 (79.60%), Query Frame = 1
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QL88_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_171720 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 2.700e-122 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 1
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g089460 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 8.600e-84 Identity = 155/206 (75.24%), Postives = 180/206 (87.38%), Query Frame = 1
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Match: B9SDU1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1712450 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 6.200e-74 Identity = 134/206 (65.05%), Postives = 164/206 (79.61%), Query Frame = 1
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Match: B9SDT5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1711490 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.800e-73 Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Match: W9RRW0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010931 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 7.600e-72 Identity = 133/201 (66.17%), Postives = 160/201 (79.60%), Query Frame = 1
BLAST of Spo18321.1 vs. TAIR (Arabidopsis)
Match: AT1G21680.1 (DPP6 N-terminal domain-like protein) HSP 1 Score: 130.6 bits (327), Expect = 2.200e-30 Identity = 77/189 (40.74%), Postives = 105/189 (55.56%), Query Frame = 1
BLAST of Spo18321.1 vs. TAIR (Arabidopsis)
Match: AT4G01870.1 (tolB protein-related) HSP 1 Score: 108.6 bits (270), Expect = 8.900e-24 Identity = 73/193 (37.82%), Postives = 103/193 (53.37%), Query Frame = 1
BLAST of Spo18321.1 vs. TAIR (Arabidopsis)
Match: AT1G21670.1 (LOCATED IN: cell wall, plant-type cell wall) HSP 1 Score: 89.0 bits (219), Expect = 7.300e-18 Identity = 65/190 (34.21%), Postives = 93/190 (48.95%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18321.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18321.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18321.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo18321.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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