Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCGACATTAGAAGCAATTAGAGGTGGTGGAGGTTCTGTCAAGGTAGGTACCATTGGAACAGTCGGTTCTTTGATGACAAGGGAGATTGAATCTTCAAGCTGCACATCAACTCCGCGTACCCCGGTTTCTGTTGTTCGTGGCAATGGCCCTCTAAAGCCACGAAAATCAATGAGTGAAACAAGTAGCAGTATTACTACCACCGGTATTAAGCATGAAGTTCTCAGGACAACAAAAACTCAAAATCTTAGCACAACAACTACTCCTAGAAGACTGAAACAAAATACACCATTAGAAGACGTGGGAAATAATAACCAGGGAATAAGCAAAAGAAGCCTGGATTTACCAGGAAAAACACGGAGCCACAAACACAGCTATCATATCCCTATGCTTGGCTCTGAAAATATCCATTTGGAGAAAACTCCTATTCGTGATAAACCCATGAAGAAAGGATCTAATATTGTTGATATAGTGGACATACGCTGTGGGAGACCAGGGGGTTCCATAAGCAATAGGCTGAAGAAGCTCAATTTTTCAAAACTTTCTCAAAGCTTCATGTAG ATGGCACCGACATTAGAAGCAATTAGAGGTGGTGGAGGTTCTGTCAAGGTAGGTACCATTGGAACAGTCGGTTCTTTGATGACAAGGGAGATTGAATCTTCAAGCTGCACATCAACTCCGCGTACCCCGGTTTCTGTTGTTCGTGGCAATGGCCCTCTAAAGCCACGAAAATCAATGAGTGAAACAAGTAGCAGTATTACTACCACCGGTATTAAGCATGAAGTTCTCAGGACAACAAAAACTCAAAATCTTAGCACAACAACTACTCCTAGAAGACTGAAACAAAATACACCATTAGAAGACGTGGGAAATAATAACCAGGGAATAAGCAAAAGAAGCCTGGATTTACCAGGAAAAACACGGAGCCACAAACACAGCTATCATATCCCTATGCTTGGCTCTGAAAATATCCATTTGGAGAAAACTCCTATTCGTGATAAACCCATGAAGAAAGGATCTAATATTGTTGATATAGTGGACATACGCTGTGGGAGACCAGGGGGTTCCATAAGCAATAGGCTGAAGAAGCTCAATTTTTCAAAACTTTCTCAAAGCTTCATGTAG ATGGCACCGACATTAGAAGCAATTAGAGGTGGTGGAGGTTCTGTCAAGGTAGGTACCATTGGAACAGTCGGTTCTTTGATGACAAGGGAGATTGAATCTTCAAGCTGCACATCAACTCCGCGTACCCCGGTTTCTGTTGTTCGTGGCAATGGCCCTCTAAAGCCACGAAAATCAATGAGTGAAACAAGTAGCAGTATTACTACCACCGGTATTAAGCATGAAGTTCTCAGGACAACAAAAACTCAAAATCTTAGCACAACAACTACTCCTAGAAGACTGAAACAAAATACACCATTAGAAGACGTGGGAAATAATAACCAGGGAATAAGCAAAAGAAGCCTGGATTTACCAGGAAAAACACGGAGCCACAAACACAGCTATCATATCCCTATGCTTGGCTCTGAAAATATCCATTTGGAGAAAACTCCTATTCGTGATAAACCCATGAAGAAAGGATCTAATATTGTTGATATAGTGGACATACGCTGTGGGAGACCAGGGGGTTCCATAAGCAATAGGCTGAAGAAGCTCAATTTTTCAAAACTTTCTCAAAGCTTCATGTAG MAPTLEAIRGGGGSVKVGTIGTVGSLMTREIESSSCTSTPRTPVSVVRGNGPLKPRKSMSETSSSITTTGIKHEVLRTTKTQNLSTTTTPRRLKQNTPLEDVGNNNQGISKRSLDLPGKTRSHKHSYHIPMLGSENIHLEKTPIRDKPMKKGSNIVDIVDIRCGRPGGSISNRLKKLNFSKLSQSFM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18365.1 vs. NCBI nr
Match: gi|902160246|gb|KNA06409.1| (hypothetical protein SOVF_181180 [Spinacia oleracea]) HSP 1 Score: 361.7 bits (927), Expect = 7.800e-97 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Spo18365.1 vs. NCBI nr
Match: gi|731364835|ref|XP_010694193.1| (PREDICTED: putative protein TPRXL [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 258.8 bits (660), Expect = 7.100e-66 Identity = 144/194 (74.23%), Postives = 159/194 (81.96%), Query Frame = 1
BLAST of Spo18365.1 vs. NCBI nr
Match: gi|645240889|ref|XP_008226813.1| (PREDICTED: uncharacterized protein LOC103326380 [Prunus mume]) HSP 1 Score: 115.9 bits (289), Expect = 7.400e-23 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 1
BLAST of Spo18365.1 vs. NCBI nr
Match: gi|595888187|ref|XP_007213419.1| (hypothetical protein PRUPE_ppa025825mg [Prunus persica]) HSP 1 Score: 114.8 bits (286), Expect = 1.700e-22 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 1
BLAST of Spo18365.1 vs. NCBI nr
Match: gi|658047221|ref|XP_008359288.1| (PREDICTED: uncharacterized protein LOC103423000 [Malus domestica]) HSP 1 Score: 114.4 bits (285), Expect = 2.200e-22 Identity = 80/194 (41.24%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181180 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 5.400e-97 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC32_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g091560 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 4.900e-66 Identity = 144/194 (74.23%), Postives = 159/194 (81.96%), Query Frame = 1
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Match: M5WZ59_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025825mg PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.200e-22 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 1
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q1V5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G086700 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.400e-22 Identity = 83/196 (42.35%), Postives = 108/196 (55.10%), Query Frame = 1
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Match: A0A061F5X8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030966 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.800e-22 Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 1
BLAST of Spo18365.1 vs. TAIR (Arabidopsis)
Match: AT5G54850.1 (unknown protein) HSP 1 Score: 108.6 bits (270), Expect = 4.200e-24 Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18365.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18365.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18365.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo18365.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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