Spo18400 (gene)

Overview
NameSpo18400
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibose-5-phosphate isomerase A
LocationSuper_scaffold_27 : 1651356 .. 1657049 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGAACTGTAGAAATGATTTCCCCACCAAGAGTGGGATTGAATTAAAAAGGACAGAAATCCCTCCATTTTTGTCCATTGTCAACCACCAGTCCAGTAACCACCATCCCCCATAAAATATGAATCCAAAATCAATCTCGTGAAATTCACAAAATTAGATCATTAGATAGACAACTAGAGGAAGAGGACTTACCTCAAAACCCCACCTCTCATTTCTCTCACTCACTCAAACTCAAACTCAAACTCAAACTCAAACTCTCCAATGGCTTCCGCCGCTTTCTCTCTCCTCCCCTCCACCTCCTCCACCACCTTTAACCGCCATGCCACCACCAAACTCCTCAACCTCAAATTCCTCCACAACCACCGTAACAAACCCTTCTTCACCACCACAATCAAATCTCTCTCTTCTCCCTCCCCAACACCAGTCTTAACTCAAGACGATCTCAAGAAACTCGCCGCCGAAAAAGCCGTCGACTCCGTCAAATCCGGCATGGTTCTCGGTCTCGGAACCGGAAGTACTGCCGCATTTGCTGTCTCGCGAATCGGCGAGCTTCTCTCTGCCGGAAAACTGACCAACATCGTTGGAATTCCTACCTCGAAGCGGACCGCAGAGCAGGCGGCGTCTCTTGGAATTCCGCTCTCCGTTCTCGATGATCATCCTCGAATTGACCTCGCCATTGATGGCGCCGATGAGGTTGATCCTGATCTTAATCTGGTTAAGGGGCGCGGTGGGGCGCTCTTGAGAGAAAAGATGGTTGAAGCTGCTAGTGATAAATTTATTGTTGTTGTTGATGATACTAAGCTTGTTGATGGTTTGGGTGGTAGTCGTCTTGCTATGCCTGTTGAAGTTGTTCAATTTTGCTGGAAATATAATCTCAAGAGATTACAGGTATGTTTCTAACTTGATTTAGTTTTTGTTATACTTCCTTTTTTGAATTGTTTGTTGTTGGTCTATCAATGATGTAGCTGAGATTCGATTCGATTCGATTCAATGTAGAGGTTGTGTTCAAATAATGACTTTTCACCAATTAAGCTAGTACTTTGAATTGTAGCTTTGTGATTCAATTTAATGCTGTCTGAAGCTAAGTTCATGAAAATGATTTCTTGTTTAAGTTTGTATTTTTCGTGGATTTTCATTAGGAGTTTGTTGCTAATGCACCGACTGATTTTATAGTGTAGCTAGGAACGATGAGGGGAATAAAGGGGTAGTGTATGTTGAATGTAATGGCATACTTTATTGGAACTTAGAATAATGAAAATGTGGTCATGGAACCTCTTGGTCGGGCGATGGAAGCTCTAGCATTGAGCTCTGATTCGATTCTCAATTGTTCAAATAATATGATTTAATAGAGAGAATATTATTCATCATGTGGCTGTCTTGTCTGTATGTGTATTTGTGTGTGCTACATTCTTGGCTACAGATATGAGTCAACTGTTATAAATAAACCACAAATTAGAAATGAGCTGAGGGTCTGTTGCTGATCACATAATGCTTAAATCATTAGTGGTTGCGGACAACTTATAGTTGGAGTAAATTTATGCACATTTGCCCTTATCTTTTCCATACAGTATCTGTTGATACTTGTGTACTCCCTCCGTCCCGGAATGCTTGACCTGTTTTCCTTATCGGGCCGTCCATTAATACTTGACCTGTTTCTAAAAATGGAAATATTCTAACAATATTATATTATTTCTCACTCCACCCCTATTAACCCACCTATCCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCCTACTCTCCCACAACCCCACCTCTTAACCCACCTCTCACTAACTACATTAAAATAATACCCCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTCTCTTAAACTCTGTGCCGGTCAAACCAGGTCGAGTGTTCCGGGACGGAGGGAGTATACTGGAGAGTTGCATTGAAAAGAAAAGATCTGTTTTTTTATATGCCTCTTTTTTCCCAATTGCAGGAGATCTTTAAGGAGCTGGGTTGTGAGGCAAAATTGAGAATGGAAGGGGATAGCAGTCCTTATGTGACTGACAACTCGAATTACATCGTGGATTTATACTTCCCGACCTCGATTAAGGATGCTGAAGCTGCAGGGAGAGAAATTTCGGCCTTGGAAGGCGTAGTAGAACATGGGTTGTTCTTGGGTATGGCTAGCGAAGTCATCATTGCTGGGAAAACTGGAGTTAGTGTGAAAACCAAGTGATTTTTGTTGGTTTGATTGGTTGACTTCCGGGTATGGAATAGTCTCCCTCTCCCCAGAATACCTACTTGTTTTTCATTTTTATATATGTTCTCTCTCACTTCATGTAATGTTTAGATGAGTTTCTGGGGTCTGGTTTGATATTTTTGCATCTGTTGTATCTGTTTATTGTTTTGATTTTAGCTAATTGTGTTATGAAGTGTAGATGAGGAATCAATGGCGAGATACAAGGATAACTTATTTAATTGTGTACATTACGCTCTGGTGCAATAAAATTTAGCAAGTTTGAAAAACATGCATTACTTCGTTGACTCTTTCTCTTATTTTCCTGCCGTCATATTAGATATTTCATTAGATTTCCTCATTCCCACCACTTCACCTTGAACTGGCTTTCTGGTTTTCATCTTCCTTAGATTATTTTACATGAAAGGAATTCACTTCTACTGAGCAAACTTTTTGTTGTCTTTCATACTATGTATGACTTATGGAAATAACATTTGTTAGTGGTTGTGACATGTTGAGGTGCAAATGTTCTGCTAAGTATCAATCAGTTTGTTGATGATTTGCAGAAGCTCCTGTCTTATATGACATTGGACATGTTTTAAATGACTACTGTAGTTGTAATATGTGGCCCATGTGATTGGATGCATTGAAAATTTTGGATATTACAAGCATACTAGTAAAGAACAATAACAACCATGTATCTCATGGTATTGTTTAGGGAGGTCCTAATATACATAGAAGACAGGTAAGAAACATTATTCTACTTTACTCGAATATGTATCCAAGTATTAGTATGGGATTTTTGATAGGTATCATAATCTAAAAGAAGAATTAGAAATCAGCGTATATTGTGGTGGTGAGCTCTGGTGGCTGAGAAACATCATTACCACAAAATTGCAGCCAGAAACATCATTGTGATAACTATCCAGTTGAGCTTCCATGACCGCATCCCTGAGATGGACGAGGAAAAAGTGGGAGTAAGGAAAAAATATACTAGTGTTTCTAGGAGTAAAGCTAGGGCCTTAATATAAGGCTTGACCTTTTTTTTGTTAGCACCTTTTAGCTGAATTTGATGAAGTTCTCTCTGAATAATTTTAATACTTTGTACTTCAGTTATTAGGATATCATTCAATGGATCATGTGCATTTTTTCAAGTTTATTCTCCTTCCATTCCTTGACAAGGTTCCTGTAAGGTTAATATATGAGGATGAGTTATACTACAGGGGTTGACCTAGTTTTTATGTCCATACCGCATTGTTCTATTAAATTTATAGGTAATACTACATAGATAACATTGGGTGACTAGTATTTTGGAACAATTAAAAGTTGAATAGATTATAAGGATTGGAAGGTATAGTATTTAGCTTTGCCAAAAACTACTGGGCATTTTCAGCTAGAAAATCCACTTGGAGGATTTTAACTTAGAAATTCAGGAGCGAAAGGGAAACTTCCTATTGTTTGGTTGATATTCAACTCACCATGGTTTCCGCTGCTTGAAGTCTGACTGATACTTGAAGTAGGACCTAATGTAACTGATGTTTTAGAAACATTTATTCCTAGCTTGGAGCAATCAGATCCGAGAGCACCTGCAAAACCAATTACCAAAAAAGCTAAAATAAGGTTTTTGCTATCTAACGTATGCAATTAGTTAAATCCATTCCTATAGAGCTCTTACAGTCGCTGTAACATGGAAAGTGTGATACGTTGAAGAGATTGTAGGCTCCTGGTTGACATTCACACATGTGCATGTAGTCTGACGAGTTTTTGCATGTCCCTTCGCCACAGTAGACCCAATTGCAAGCTAGAACATCAAAATCTCACTTGAGAAACTTTTTAATCAAGTGTATAGATCATTGGACAAATAGGATGTTGCTGATAATCTGGTATAATGGGTAGACTTACGATTAAAGACAGATACGTCAGATGAGTTTATGGGGATAGCTGGAAGCGGAGGAGCAGGTGGCATGCAGGAGTAGTTTATAGAACCTGTTCAAGATGTTCACTTTTACTTTGAGAAAGATCAACAAATTGCAATTCAAGCAGTTATATCACAGCAAGAAAAGGGTCATCTCTCTGCTTTTTCAAATTTGTTTAGCCTTTTCTTATTCTTGCAATTTCATAGGATTATGTGTTACTTATACTCTTGAATACTCTGATGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCACTCATTCAGTACAGATACTTCCTTACTTTGCCTTGTTGTACAATGATTGTGCTTTTTCCAATTTGGTATACGGAGTATTTCAAATCGTTTGGCCTAATTATTAAATATCTCTGCATGCTTTGAATGTTTATCTAGTACGGAGTACTCTTATATAACCTTTGTGAAAAATAATCAACTTCCTCCTTTTTCACCGTCTCTGTTTTTGTCTTTTCTCTTGAAAAGAGGAACTCATATGTGACTCTGTATGAAAGCTAATGATTGTGGAAGATGAACCCCCTTAAGAAGTGAAACTTACAATTTGGAATTATACATGGAAGAAATTGTAGATATTGTTCCTCGCTGTCTGTTAGGCGCGTTCTTCTCCAGCCAGAATCACATTCACATATGAAACCATGTGGTAAGTAGTCTGGTTTAGATTCACATGTGCCTTTCCCACAACTTACCTGACTGCATTTTTCTGTCATTATAAAAAAAAATCATCAGAAACACCAAATGTTATGTTTGGTTTACTGAGTTGAGTAAATTTGAGAAAGCTAGGCTCATACTCAACTGTAAGCAGAGGCGTTTACCTGAATCTCCGAAAGCAGTGATTGAAAGAAAGAATAAAAGTAGAACTGCAGATGCTGGGTGACTGGAGGTAGCCATTGATTATTCTGTAATTGAGGGAATACAAGTTAGATTTTGTTGGTTTATCGCTTAAGTTGCAGGTTGTATTTATAGGAAACCCAAGGGACCTGGGGCTGTTTGTAGGGGAAAGCTCTTGCTAAATACCGTTTTTTTTTCTTTCATGGCAGGTATGTAAAAAGCTAAGTTGAAGCATTGTAGTAGGAGTATTCTTGTTTTCATCTCATTTCCTACCCCTTCCTTTCCGTCTTTGAAAACTCGAAAGAGGTGATGCAGGTGCTTCTAGCAGTTTGACGTTTTTTTCAAAGTTTTTCTAGTCTGATATTATGACTTCCATGGTACATTAATTTTTAAGGTTACATTGTATTTTCAAGAAAGTTTCTCGTCTTTCGTTGACAAAATTTCGTGAGCTTTTGATGTATTAGTACTGCATATTGTAAATTTGTTTCTATGAAGGTTTGCTATTGAATTTCTGTTATGTCGTTATTTGAGTTGACATGAAAACTGGTGGAGAAGTCAAAAATGACGATTTGAACATAAATGTAGACAGTAGTGGTACCTGCCCCCAACTTTTACTATTTCTTTTTTTTTAACTCCGCG

mRNA sequence

AAATGGAACTGTAGAAATGATTTCCCCACCAAGAGTGGGATTGAATTAAAAAGGACAGAAATCCCTCCATTTTTGTCCATTGTCAACCACCAGTCCAGTAACCACCATCCCCCATAAAATATGAATCCAAAATCAATCTCGTGAAATTCACAAAATTAGATCATTAGATAGACAACTAGAGGAAGAGGACTTACCTCAAAACCCCACCTCTCATTTCTCTCACTCACTCAAACTCAAACTCAAACTCAAACTCAAACTCTCCAATGGCTTCCGCCGCTTTCTCTCTCCTCCCCTCCACCTCCTCCACCACCTTTAACCGCCATGCCACCACCAAACTCCTCAACCTCAAATTCCTCCACAACCACCGTAACAAACCCTTCTTCACCACCACAATCAAATCTCTCTCTTCTCCCTCCCCAACACCAGTCTTAACTCAAGACGATCTCAAGAAACTCGCCGCCGAAAAAGCCGTCGACTCCGTCAAATCCGGCATGGTTCTCGGTCTCGGAACCGGAAGTACTGCCGCATTTGCTGTCTCGCGAATCGGCGAGCTTCTCTCTGCCGGAAAACTGACCAACATCGTTGGAATTCCTACCTCGAAGCGGACCGCAGAGCAGGCGGCGTCTCTTGGAATTCCGCTCTCCGTTCTCGATGATCATCCTCGAATTGACCTCGCCATTGATGGCGCCGATGAGGTTGATCCTGATCTTAATCTGGTTAAGGGGCGCGGTGGGGCGCTCTTGAGAGAAAAGATGGTTGAAGCTGCTAGTGATAAATTTATTGTTGTTGTTGATGATACTAAGCTTGTTGATGGTTTGGGTGGTAGTCGTCTTGCTATGCCTGTTGAAGTTGTTCAATTTTGCTGGAAATATAATCTCAAGAGATTACAGGAGATCTTTAAGGAGCTGGGTTGTGAGGCAAAATTGAGAATGGAAGGGGATAGCAGTCCTTATGTGACTGACAACTCGAATTACATCGTGGATTTATACTTCCCGACCTCGATTAAGGATGCTGAAGCTGCAGGGAGAGAAATTTCGGCCTTGGAAGGCGTAGTAGAACATGGGTTGTTCTTGGGTATGGCTAGCGAAGTCATCATTGCTGGGAAAACTGGAGTTAGTGTGAAAACCAAGTGATTTTTGTTGGTTTGATTGGTTGACTTCCGGGTATGGAATAGTCTCCCTCTCCCCAGAATACCTACTTGTTTTTCATTTTTATATATGTTCTCTCTCACTTCATGTAATGTTTAGATGAGTTTCTGGGGTCTGGTTTGATATTTTTGCATCTGTTGTATCTGTTTATTGTTTTGATTTTAGCTAATTGTGTTATGAAGTGTAGATGAGGAATCAATGGCGAGATACAAGGATAACTTATTTAATTGTGTACATTACGCTCTGGTGCAATAAAATTTAGCAAGTTTGAAAAACATGCATTACTTCGTTGACTCTTTCTCTTATTTTCCTGCCGTCATATTAGATATTTCATTAGATTTCCTCATTCCCACCACTTCACCTTGAACTGGCTTTCTGGTTTTCATCTTCCTTAGATTATTTTACATGAAAGGAATTCACTTCTACTGAGCAAACTTTTTGTTGTCTTTCATACTATGTATGACTTATGGAAATAACATTTGTTAGTGGTTGTGACATGTTGAGGTGCAAATGTTCTGCTAAGTATCAATCAGTTTGTTGATGATTTGCAGAAGCTCCTGTCTTATATGACATTGGACATGTTTTAAATGACTACTGTAGTTGTAATATGTGGCCCATGTGATTGGATGCATTGAAAATTTTGGATATTACAAGCATACTAGTAAAGAACAATAACAACCATGTATCTCATGGTATTGTTTAGGGAGGTCCTAATATACATAGAAGACAGGTAAGAAACATTATTCTACTTTACTCGAATATGTATCCAAGTATTAGTATGGGATTTTTGATAGGTATCATAATCTAAAAGAAGAATTAGAAATCAGCGTATATTGTGGTGGTGAGCTCTGGTGGCTGAGAAACATCATTACCACAAAATTGCAGCCAGAAACATCATTGTGATAACTATCCAGTTGAGCTTCCATGACCGCATCCCTGAGATGGACGAGGAAAAAGTGGGAGTAAGGAAAAAATATACTAGTGTTTCTAGGAGTAAAGCTAGGGCCTTAATATAAGGCTTGACCTTTTTTTTGTTAGCACCTTTTAGCTGAATTTGATGAAGTTCTCTCTGAATAATTTTAATACTTTGTACTTCAGTTATTAGGATATCATTCAATGGATCATGTGCATTTTTTCAAGTTTATTCTCCTTCCATTCCTTGACAAGGTTCCTGTAAGGTTAATATATGAGGATGAGTTATACTACAGGGGTTGACCTAGTTTTTATGTCCATACCGCATTGTTCTATTAAATTTATAGGTAATACTACATAGATAACATTGGGTGACTAGTATTTTGGAACAATTAAAAGTTGAATAGATTATAAGGATTGGAAGGTATAGTATTTAGCTTTGCCAAAAACTACTGGGCATTTTCAGCTAGAAAATCCACTTGGAGGATTTTAACTTAGAAATTCAGGAGCGAAAGGGAAACTTCCTATTGTTTGGTTGATATTCAACTCACCATGGTTTCCGCTGCTTGAAGTCTGACTGATACTTGAAGTAGGACCTAATGTAACTGATGTTTTAGAAACATTTATTCCTAGCTTGGAGCAATCAGATCCGAGAGCACCTGCAAAACCAATTACCAAAAAAGCTAAAATAAGGTTTTTGCTATCTAACGTATGCAATTAGTTAAATCCATTCCTATAGAGCTCTTACAGTCGCTGTAACATGGAAAGTGTGATACGTTGAAGAGATTGTAGGCTCCTGGTTGACATTCACACATGTGCATGTAGTCTGACGAGTTTTTGCATGTCCCTTCGCCACAGTAGACCCAATTGCAAGCTAGAACATCAAAATCTCACTTGAGAAACTTTTTAATCAAGTGTATAGATCATTGGACAAATAGGATGTTGCTGATAATCTGGTATAATGGGTAGACTTACGATTAAAGACAGATACGTCAGATGAGTTTATGGGGATAGCTGGAAGCGGAGGAGCAGGTGGCATGCAGGAGTAGTTTATAGAACCTGTTCAAGATGTTCACTTTTACTTTGAGAAAGATCAACAAATTGCAATTCAAGCAGTTATATCACAGCAAGAAAAGGGTCATCTCTCTGCTTTTTCAAATTTGTTTAGCCTTTTCTTATTCTTGCAATTTCATAGGATTATGTGTTACTTATACTCTTGAATACTCTGATGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCAGCATTCACTCATTCAGTACAGATACTTCCTTACTTTGCCTTGTTGTACAATGATTGTGCTTTTTCCAATTTGGTATACGGAGTATTTCAAATCGTTTGGCCTAATTATTAAATATCTCTGCATGCTTTGAATGTTTATCTAGTACGGAGTACTCTTATATAACCTTTGTGAAAAATAATCAACTTCCTCCTTTTTCACCGTCTCTGTTTTTGTCTTTTCTCTTGAAAAGAGGAACTCATATGTGACTCTGTATGAAAGCTAATGATTGTGGAAGATGAACCCCCTTAAGAAGTGAAACTTACAATTTGGAATTATACATGGAAGAAATTGTAGATATTGTTCCTCGCTGTCTGTTAGGCGCGTTCTTCTCCAGCCAGAATCACATTCACATATGAAACCATGTGGTAAGTAGTCTGGTTTAGATTCACATGTGCCTTTCCCACAACTTACCTGACTGCATTTTTCTGTCATTATAAAAAAAAATCATCAGAAACACCAAATGTTATGTTTGGTTTACTGAGTTGAGTAAATTTGAGAAAGCTAGGCTCATACTCAACTGTAAGCAGAGGCGTTTACCTGAATCTCCGAAAGCAGTGATTGAAAGAAAGAATAAAAGTAGAACTGCAGATGCTGGGTGACTGGAGGTAGCCATTGATTATTCTGTAATTGAGGGAATACAAGTTAGATTTTGTTGGTTTATCGCTTAAGTTGCAGGTTGTATTTATAGGAAACCCAAGGGACCTGGGGCTGTTTGTAGGGGAAAGCTCTTGCTAAATACCGTTTTTTTTTCTTTCATGGCAGGTATGTAAAAAGCTAAGTTGAAGCATTGTAGTAGGAGTATTCTTGTTTTCATCTCATTTCCTACCCCTTCCTTTCCGTCTTTGAAAACTCGAAAGAGGTGATGCAGGTGCTTCTAGCAGTTTGACGTTTTTTTCAAAGTTTTTCTAGTCTGATATTATGACTTCCATGGTACATTAATTTTTAAGGTTACATTGTATTTTCAAGAAAGTTTCTCGTCTTTCGTTGACAAAATTTCGTGAGCTTTTGATGTATTAGTACTGCATATTGTAAATTTGTTTCTATGAAGGTTTGCTATTGAATTTCTGTTATGTCGTTATTTGAGTTGACATGAAAACTGGTGGAGAAGTCAAAAATGACGATTTGAACATAAATGTAGACAGTAGTGGTACCTGCCCCCAACTTTTACTATTTCTTTTTTTTTAACTCCGCG

Coding sequence (CDS)

ATGGCTTCCGCCGCTTTCTCTCTCCTCCCCTCCACCTCCTCCACCACCTTTAACCGCCATGCCACCACCAAACTCCTCAACCTCAAATTCCTCCACAACCACCGTAACAAACCCTTCTTCACCACCACAATCAAATCTCTCTCTTCTCCCTCCCCAACACCAGTCTTAACTCAAGACGATCTCAAGAAACTCGCCGCCGAAAAAGCCGTCGACTCCGTCAAATCCGGCATGGTTCTCGGTCTCGGAACCGGAAGTACTGCCGCATTTGCTGTCTCGCGAATCGGCGAGCTTCTCTCTGCCGGAAAACTGACCAACATCGTTGGAATTCCTACCTCGAAGCGGACCGCAGAGCAGGCGGCGTCTCTTGGAATTCCGCTCTCCGTTCTCGATGATCATCCTCGAATTGACCTCGCCATTGATGGCGCCGATGAGGTTGATCCTGATCTTAATCTGGTTAAGGGGCGCGGTGGGGCGCTCTTGAGAGAAAAGATGGTTGAAGCTGCTAGTGATAAATTTATTGTTGTTGTTGATGATACTAAGCTTGTTGATGGTTTGGGTGGTAGTCGTCTTGCTATGCCTGTTGAAGTTGTTCAATTTTGCTGGAAATATAATCTCAAGAGATTACAGGAGATCTTTAAGGAGCTGGGTTGTGAGGCAAAATTGAGAATGGAAGGGGATAGCAGTCCTTATGTGACTGACAACTCGAATTACATCGTGGATTTATACTTCCCGACCTCGATTAAGGATGCTGAAGCTGCAGGGAGAGAAATTTCGGCCTTGGAAGGCGTAGTAGAACATGGGTTGTTCTTGGGTATGGCTAGCGAAGTCATCATTGCTGGGAAAACTGGAGTTAGTGTGAAAACCAAGTGA

Protein sequence

MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18400.1Spo18400.1mRNA


Homology
[Close]
BLAST of Spo18400.1 vs. NCBI nr
Match: gi|18654317|gb|AAL77589.1|L43068_1 (chloroplast ribose-5-phosphate isomerase [Spinacia oleracea])

HSP 1 Score: 553.1 bits (1424), Expect = 2.800e-154
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD 60
           MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD
Sbjct: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD 60

Query: 61  LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA 120
           LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA
Sbjct: 61  LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA 120

Query: 121 SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK 180
           SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK
Sbjct: 121 SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK 180

Query: 181 LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD 240
           LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD
Sbjct: 181 LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD 240

Query: 241 LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK
Sbjct: 241 LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 289
[Close]
BLAST of Spo18400.1 vs. NCBI nr
Match: gi|731328476|ref|XP_010675073.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 500.0 bits (1286), Expect = 2.800e-138
Identity = 266/291 (91.41%), Postives = 274/291 (94.16%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLH--NHRNKPFFTTTIKSLSSPSPTPVLTQ 60
           MASA FSLLPST S+TFNRH TTKL NL F H  N RNKPFF+TTIKSLSSP+PTP LTQ
Sbjct: 1   MASATFSLLPSTPSSTFNRHTTTKLFNLNFRHYTNLRNKPFFSTTIKSLSSPTPTPTLTQ 60

Query: 61  DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQ 120
           DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAV+RIGELLS+GKL+NIVGIPTSKRT EQ
Sbjct: 61  DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVARIGELLSSGKLSNIVGIPTSKRTQEQ 120

Query: 121 AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD 180
           AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD
Sbjct: 121 AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD 180

Query: 181 TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYI 240
           TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKEL  +AKLRMEGD  PYVTDNSNYI
Sbjct: 181 TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELDIDAKLRMEGD-KPYVTDNSNYI 240

Query: 241 VDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           VDLYF T IKDAEAAGREISALEGVVEHGLFLGMA+EVIIAGKTGVSVKTK
Sbjct: 241 VDLYFSTPIKDAEAAGREISALEGVVEHGLFLGMATEVIIAGKTGVSVKTK 290
[Close]
BLAST of Spo18400.1 vs. NCBI nr
Match: gi|720000856|ref|XP_010256162.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 406.4 bits (1043), Expect = 4.300e-110
Identity = 218/285 (76.49%), Postives = 239/285 (83.86%), Query Frame = 1 

		  

Query: 7   SLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTT--IKSLSSPSPTPVLTQDDLKKL 66
           SL  S++S++   H     L L+   +   +P   T   I++ SSPSP P LTQDDLKKL
Sbjct: 11  SLKSSSASSSLLHHNNAARLILRTPSSLTIRPLSRTPMYIRAFSSPSPAPPLTQDDLKKL 70

Query: 67  AAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAASLGI 126
           AA+KAV+ V SGMVLGLGTGSTAAF V++IGELL  G+L +IVGIPTSKRT EQAASLGI
Sbjct: 71  AADKAVEYVSSGMVLGLGTGSTAAFVVAKIGELLKTGQLKDIVGIPTSKRTFEQAASLGI 130

Query: 127 PLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTKLVDG 186
           PLSVLDDHPR+DLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS KF+VVVDDTKLV G
Sbjct: 131 PLSVLDDHPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASSKFVVVVDDTKLVTG 190

Query: 187 LGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVDLYFP 246
           LGGS LAMPVEVVQFCWKYNL RLQE+FKE GCEAKLR++GD  PYVTDNSNYIVDLYF 
Sbjct: 191 LGGSGLAMPVEVVQFCWKYNLTRLQELFKEEGCEAKLRLDGDGKPYVTDNSNYIVDLYFK 250

Query: 247 TSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           T IKDA AAG+EISALEGVVEHGLFL MAS VIIAGK GVSVKTK
Sbjct: 251 TPIKDAGAAGKEISALEGVVEHGLFLDMASSVIIAGKEGVSVKTK 295
[Close]
BLAST of Spo18400.1 vs. NCBI nr
Match: gi|976900599|gb|KVH88779.1| (Ribose 5-phosphate isomerase, type A [Cynara cardunculus var. scolymus])

HSP 1 Score: 394.8 bits (1013), Expect = 1.300e-106
Identity = 209/295 (70.85%), Postives = 238/295 (80.68%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFT------TTIKSLSSPSPTP 60
           MAS +    P  SS+   RH           H+H N    +       +IK+ S+PSP  
Sbjct: 1   MASLSLISSPPLSSSLLRRH-----------HHHHNARLISFNSPRYLSIKAFSAPSPVQ 60

Query: 61  VLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKR 120
            LTQDDLKKLAA+KAV+ V SGMVLGLGTGSTAAF VS+IGELL++G+L +IVG+PTSKR
Sbjct: 61  PLTQDDLKKLAADKAVEYVSSGMVLGLGTGSTAAFVVSKIGELLASGQLKDIVGVPTSKR 120

Query: 121 TAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIV 180
           T EQAASLGIPLS+LDDHP++DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+V
Sbjct: 121 TQEQAASLGIPLSILDDHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVV 180

Query: 181 VVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDN 240
           VVDD+KLV GLGGS LAMPVEVVQFCWKYNL RLQE+FKE GC+AKLR++GD  PYVTDN
Sbjct: 181 VVDDSKLVSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCDAKLRLDGDGKPYVTDN 240

Query: 241 SNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
            NYIVDLYF T IKDA +AG+EIS+ EGVVEHGLFL M + VIIAGK GVSVK+K
Sbjct: 241 MNYIVDLYFKTPIKDAWSAGKEISSFEGVVEHGLFLDMTTAVIIAGKDGVSVKSK 284
[Close]
BLAST of Spo18400.1 vs. NCBI nr
Match: gi|743760721|ref|XP_010938460.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Elaeis guineensis])

HSP 1 Score: 393.7 bits (1010), Expect = 2.900e-106
Identity = 214/290 (73.79%), Postives = 237/290 (81.72%), Query Frame = 1 

		  

Query: 2   ASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPV--LTQD 61
           +S++ S     SS    RHA    L   FL +   +P   T I++LSSPSP+P   LTQD
Sbjct: 17  SSSSSSSSTLKSSFVLRRHALA--LRPSFLPSPHRRP--VTPIRALSSPSPSPATALTQD 76

Query: 62  DLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQA 121
           DLKKLAA KAVD V SGMVLGLGTGSTAAF VS IG LL++GKLT+IVG+PTSKRT EQA
Sbjct: 77  DLKKLAAVKAVDYVTSGMVLGLGTGSTAAFVVSEIGALLASGKLTDIVGVPTSKRTFEQA 136

Query: 122 ASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDT 181
            SLGIPLS LDDHPR++LAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+VVVD+T
Sbjct: 137 KSLGIPLSTLDDHPRLNLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDET 196

Query: 182 KLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIV 241
           KLV GLGGS LAMPVEVVQFCWKYN  RLQE+FKE GCEAKLR++ D  PY+TDNSNYIV
Sbjct: 197 KLVTGLGGSGLAMPVEVVQFCWKYNQTRLQELFKEEGCEAKLRLDADGKPYITDNSNYIV 256

Query: 242 DLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           DLYF T IKDA AAG+EIS LEGVVEHGLFL M S VIIAGK GVS+K+K
Sbjct: 257 DLYFKTPIKDAPAAGKEISTLEGVVEHGLFLDMTSAVIIAGKDGVSIKSK 302
[Close]
BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Match: Q8RU73_SPIOL (Chloroplast ribose-5-phosphate isomerase OS=Spinacia oleracea GN=SOVF_206770 PE=2 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.000e-154
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD 60
           MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD
Sbjct: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDD 60

Query: 61  LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA 120
           LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA
Sbjct: 61  LKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAA 120

Query: 121 SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK 180
           SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK
Sbjct: 121 SLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTK 180

Query: 181 LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD 240
           LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD
Sbjct: 181 LVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVD 240

Query: 241 LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK
Sbjct: 241 LYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 289
[Close]
BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIK6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g083630 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.000e-138
Identity = 266/291 (91.41%), Postives = 274/291 (94.16%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLH--NHRNKPFFTTTIKSLSSPSPTPVLTQ 60
           MASA FSLLPST S+TFNRH TTKL NL F H  N RNKPFF+TTIKSLSSP+PTP LTQ
Sbjct: 1   MASATFSLLPSTPSSTFNRHTTTKLFNLNFRHYTNLRNKPFFSTTIKSLSSPTPTPTLTQ 60

Query: 61  DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQ 120
           DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAV+RIGELLS+GKL+NIVGIPTSKRT EQ
Sbjct: 61  DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVARIGELLSSGKLSNIVGIPTSKRTQEQ 120

Query: 121 AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD 180
           AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD
Sbjct: 121 AASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDD 180

Query: 181 TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYI 240
           TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKEL  +AKLRMEGD  PYVTDNSNYI
Sbjct: 181 TKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELDIDAKLRMEGD-KPYVTDNSNYI 240

Query: 241 VDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           VDLYF T IKDAEAAGREISALEGVVEHGLFLGMA+EVIIAGKTGVSVKTK
Sbjct: 241 VDLYFSTPIKDAEAAGREISALEGVVEHGLFLGMATEVIIAGKTGVSVKTK 290
[Close]
BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Match: A0A118JS96_CYNCS (Ribose 5-phosphate isomerase, type A OS=Cynara cardunculus var. scolymus GN=Ccrd_025776 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.900e-107
Identity = 209/295 (70.85%), Postives = 238/295 (80.68%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFT------TTIKSLSSPSPTP 60
           MAS +    P  SS+   RH           H+H N    +       +IK+ S+PSP  
Sbjct: 1   MASLSLISSPPLSSSLLRRH-----------HHHHNARLISFNSPRYLSIKAFSAPSPVQ 60

Query: 61  VLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKR 120
            LTQDDLKKLAA+KAV+ V SGMVLGLGTGSTAAF VS+IGELL++G+L +IVG+PTSKR
Sbjct: 61  PLTQDDLKKLAADKAVEYVSSGMVLGLGTGSTAAFVVSKIGELLASGQLKDIVGVPTSKR 120

Query: 121 TAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIV 180
           T EQAASLGIPLS+LDDHP++DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+V
Sbjct: 121 TQEQAASLGIPLSILDDHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVV 180

Query: 181 VVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDN 240
           VVDD+KLV GLGGS LAMPVEVVQFCWKYNL RLQE+FKE GC+AKLR++GD  PYVTDN
Sbjct: 181 VVDDSKLVSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCDAKLRLDGDGKPYVTDN 240

Query: 241 SNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
            NYIVDLYF T IKDA +AG+EIS+ EGVVEHGLFL M + VIIAGK GVSVK+K
Sbjct: 241 MNYIVDLYFKTPIKDAWSAGKEISSFEGVVEHGLFLDMTTAVIIAGKDGVSVKSK 284
[Close]
BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Match: A0A103LWJ6_CYNCS (Ribose 5-phosphate isomerase, type A OS=Cynara cardunculus var. scolymus GN=Ccrd_026654 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.800e-106
Identity = 206/280 (73.57%), Postives = 233/280 (83.21%), Query Frame = 1 

		  

Query: 22  TTKLLNLKFLHNHRNK--------PFFTT----TIKSLSSPSPTPVLTQDDLKKLAAEKA 81
           T+ LL     H+H N         P  T+    TIK+ S+PSP   LTQDDLKKLAA+KA
Sbjct: 12  TSSLLRRHHHHHHHNAAITNPTHLPAITSPRFLTIKAFSAPSPVQPLTQDDLKKLAADKA 71

Query: 82  VDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAASLGIPLSVL 141
           V+ V SGMVLGLGTGSTAAF VS+IGELL++G+L +IVG+PTSKRT EQAASLGIPLS+L
Sbjct: 72  VEYVTSGMVLGLGTGSTAAFVVSKIGELLASGQLKDIVGVPTSKRTQEQAASLGIPLSIL 131

Query: 142 DDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTKLVDGLGGSR 201
           DDHP++DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+VVVDD+KLV GLGGS 
Sbjct: 132 DDHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDSKLVSGLGGSG 191

Query: 202 LAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVDLYFPTSIKD 261
           LAMPVEVVQFCWKYNL RLQ++FK  GC+AKLR++GD  PYVTDN NYIVDLYF T IKD
Sbjct: 192 LAMPVEVVQFCWKYNLVRLQDLFKGEGCDAKLRLDGDGKPYVTDNMNYIVDLYFKTPIKD 251

Query: 262 AEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           A AAG+EIS+ EGVVEHGLFL M + VIIAGK GVSVK+K
Sbjct: 252 AWAAGKEISSFEGVVEHGLFLDMTTAVIIAGKDGVSVKSK 291
[Close]
BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LFJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011530 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 6.400e-105
Identity = 212/290 (73.10%), Postives = 237/290 (81.72%), Query Frame = 1 

		  

Query: 1   MASAAFSLLPSTSSTTFNRHATTKLLNLKFLHNHRNKPF-FTTTIKSLSSPSPTPVLTQD 60
           MAS +F   PS SS+   RH ++ + NL       +KP   +T  + LS  +    LTQD
Sbjct: 1   MASLSFISPPSISSS---RHVSS-IANLLL---RSSKPLNLSTHYRPLSVHARVSTLTQD 60

Query: 61  DLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQA 120
           DLKKLAA+KAV+ VKSGMVLGLGTGSTAAF V++IGELL   +LT+IVGIPTSKRT EQA
Sbjct: 61  DLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQA 120

Query: 121 ASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDT 180
            SLGIPLSVLDDHP +DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+VVVDDT
Sbjct: 121 RSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDT 180

Query: 181 KLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIV 240
           KLVDGLGGS LAMPVEVVQFCWKYNL RLQE+FKE GCEAKLR++GD  PYVTDNSNYIV
Sbjct: 181 KLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIV 240

Query: 241 DLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGVSVKTK 290
           DLYF T IKD  AAG+EIS+ EGVVEHGLFL MA+ VIIAGK G+ +K K
Sbjct: 241 DLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283
[Close]
BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Match: RPI3_ARATH (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=RPI3 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.800e-99
Identity = 185/247 (74.90%), Postives = 210/247 (85.02%), Query Frame = 1 

		  

Query: 43  TIKSLSSPSPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGK 102
           T  S S  + +  L+QDDLKKLAAEKAV+++K GMVLGLGTGSTAAFAV +IG+LLS+G+
Sbjct: 30  TSVSFSVKAQSVALSQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGE 89

Query: 103 LTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLRE 162
           L +IVGIPTSKRT EQA SLGIPL  LD HPRIDLAIDGADEVDP+L+LVKGRGGALLRE
Sbjct: 90  LYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLRE 149

Query: 163 KMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLR 222
           KMVEA +DKFIVV DDTKLV GLGGS LAMPVEVVQFCW +NL RLQ++FKE GCE+KLR
Sbjct: 150 KMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLR 209

Query: 223 MEGDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKT 282
           ++GD  PYVTDNSNYI+DLYF T +KD  AA +EI   +GVVEHGLFLGMA+ VIIAGK 
Sbjct: 210 VDGDGKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKN 269

Query: 283 GVSVKTK 290
           GV V TK
Sbjct: 270 GVEVMTK 276
[Close]
BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Match: RPI2_ARATH (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana GN=RPI2 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.100e-81
Identity = 161/258 (62.40%), Postives = 194/258 (75.19%), Query Frame = 1 

		  

Query: 38  PFFTTTIKSLS-----SPSPTPV-LTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAV 97
           P F T+ KSLS     S  P P+ LTQD+LK++AA KAV+ V+SGMVLGLGTGSTA  AV
Sbjct: 7   PLFITSDKSLSAFDVASSPPQPMNLTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAV 66

Query: 98  SRIGELLSAGKLTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNL 157
            RIGELL  GKL NIVGIPTSK+T EQA SLGIPLS LD HP IDL+IDGADEVDP LNL
Sbjct: 67  DRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNL 126

Query: 158 VKGRGGALLREKMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEI 217
           VKGRGG+LLREKM+E AS KF+V+VDD+K+V  +GGS+LA+PVE+V FCWK+  ++L+ +
Sbjct: 127 VKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSL 186

Query: 218 FKELGCEAKLRMEGDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLG 277
            +  GCEA LR+      +VTDN NYIVD++    + D  A    I  L GVVEHG+FL 
Sbjct: 187 LEGYGCEANLRLGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLD 246

Query: 278 MASEVIIAGKTGVSVKTK 290
           MAS VIIAG+ GV +K K
Sbjct: 247 MASTVIIAGELGVKIKNK 264
[Close]
BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Match: RPI1_ARATH (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana GN=RPI1 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.800e-77
Identity = 152/254 (59.84%), Postives = 192/254 (75.59%), Query Frame = 1 

		  

Query: 41  TTTIKSLSSPSPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSA 100
           T  + +++S  P   LTQ++LKK+AA KAV+ V+SGMV+GLGTGSTA  AV+RI ELL  
Sbjct: 12  TEDLAAVNSAPPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLRE 71

Query: 101 GKLTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALL 160
           GKL +I+GIPTS  T EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LL
Sbjct: 72  GKLKDIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLL 131

Query: 161 REKMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAK 220
           REKM+E AS KF+V+VD++KLV  +GGS LA+PVEVV FC  +   +L+E+F++ GC AK
Sbjct: 132 REKMIEGASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAK 191

Query: 221 LRME-----GDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASE 280
           LRM+      +++P VTDN NY+VDLY    I D E A   I    GVVEHG+FLGMA+ 
Sbjct: 192 LRMKIGSNGEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATT 251

Query: 281 VIIAGKTGVSVKTK 290
           +I+AGK GV+VK +
Sbjct: 252 LIVAGKFGVTVKDR 265
[Close]
BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.700e-55
Identity = 118/227 (51.98%), Postives = 159/227 (70.04%), Query Frame = 1 

		  

Query: 59  DDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQ 118
           D+LK+ AA+ A   V+SGMV+GLGTGSTAAFAV  + + +    L   +G+PTS+RTAEQ
Sbjct: 5   DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQ 64

Query: 119 AASLGIPLSVLDDHPRIDLAIDGADEVD-PDLNLVKGRGGALLREKMVEAASDKFIVVVD 178
           A SLGIPL+ L++ PR+DLAIDGADE++   LNL+KG GGALLREK+VEA++ + I++ D
Sbjct: 65  ARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIAD 124

Query: 179 DTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNY 238
            +K V  L G+R  +PVEVV+F WK  L R++     LGC+A LR   +  PY+TD  +Y
Sbjct: 125 ASKKVAHL-GTRFPVPVEVVRFGWKTTLARVE----ALGCQAVLRRTAEGDPYLTDEQHY 184

Query: 239 IVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGV 285
           I+D  F      A+ A  ++    GVVEHGLF+GMA+E IIAG  G+
Sbjct: 185 ILDCQFGPIANPAKLA-EQLKGTVGVVEHGLFIGMATEAIIAGPEGI 224
[Close]
BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Match: RPIA_ROSCS (Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.000e-50
Identity = 111/223 (49.78%), Postives = 151/223 (67.71%), Query Frame = 1 

		  

Query: 62  KKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAAS 121
           ++ AAE+A+D V+SGM +GLGTGSTA+F +  +   L+ G+L  +VG+PTS++TA  A  
Sbjct: 7   RRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARE 66

Query: 122 LGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTKL 181
           LGIPL+ LD HP +DLA+DGADE+DP L L+KG GGA+LREK+V A++ +F+V+   +K 
Sbjct: 67  LGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKR 126

Query: 182 VDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPYVTDNSNYIVDL 241
           V+ L G R  +PVEVV F     ++RL      LG E  LR +   +P+VTD  N I+D 
Sbjct: 127 VERL-GERSPLPVEVVTFGMPLCIRRL----AALGGEPVLRCDHSGAPFVTDEGNLILDC 186

Query: 242 YFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGV 285
           +F   I D EA    I A+ GVV HGLFLGMAS  +IAG  G+
Sbjct: 187 HFGV-IADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGI 223
[Close]
BLAST of Spo18400.1 vs. TAIR (Arabidopsis)
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 362.1 bits (928), Expect = 3.200e-100
Identity = 185/247 (74.90%), Postives = 210/247 (85.02%), Query Frame = 1 

		  

Query: 43  TIKSLSSPSPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGK 102
           T  S S  + +  L+QDDLKKLAAEKAV+++K GMVLGLGTGSTAAFAV +IG+LLS+G+
Sbjct: 30  TSVSFSVKAQSVALSQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGE 89

Query: 103 LTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLRE 162
           L +IVGIPTSKRT EQA SLGIPL  LD HPRIDLAIDGADEVDP+L+LVKGRGGALLRE
Sbjct: 90  LYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLRE 149

Query: 163 KMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLR 222
           KMVEA +DKFIVV DDTKLV GLGGS LAMPVEVVQFCW +NL RLQ++FKE GCE+KLR
Sbjct: 150 KMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLR 209

Query: 223 MEGDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKT 282
           ++GD  PYVTDNSNYI+DLYF T +KD  AA +EI   +GVVEHGLFLGMA+ VIIAGK 
Sbjct: 210 VDGDGKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKN 269

Query: 283 GVSVKTK 290
           GV V TK
Sbjct: 270 GVEVMTK 276
[Close]
BLAST of Spo18400.1 vs. TAIR (Arabidopsis)
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2)

HSP 1 Score: 302.8 bits (774), Expect = 2.300e-82
Identity = 161/258 (62.40%), Postives = 194/258 (75.19%), Query Frame = 1 

		  

Query: 38  PFFTTTIKSLS-----SPSPTPV-LTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAV 97
           P F T+ KSLS     S  P P+ LTQD+LK++AA KAV+ V+SGMVLGLGTGSTA  AV
Sbjct: 7   PLFITSDKSLSAFDVASSPPQPMNLTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAV 66

Query: 98  SRIGELLSAGKLTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNL 157
            RIGELL  GKL NIVGIPTSK+T EQA SLGIPLS LD HP IDL+IDGADEVDP LNL
Sbjct: 67  DRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNL 126

Query: 158 VKGRGGALLREKMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEI 217
           VKGRGG+LLREKM+E AS KF+V+VDD+K+V  +GGS+LA+PVE+V FCWK+  ++L+ +
Sbjct: 127 VKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSL 186

Query: 218 FKELGCEAKLRMEGDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLG 277
            +  GCEA LR+      +VTDN NYIVD++    + D  A    I  L GVVEHG+FL 
Sbjct: 187 LEGYGCEANLRLGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLD 246

Query: 278 MASEVIIAGKTGVSVKTK 290
           MAS VIIAG+ GV +K K
Sbjct: 247 MASTVIIAGELGVKIKNK 264
[Close]
BLAST of Spo18400.1 vs. TAIR (Arabidopsis)
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 290.0 bits (741), Expect = 1.600e-78
Identity = 152/254 (59.84%), Postives = 192/254 (75.59%), Query Frame = 1 

		  

Query: 41  TTTIKSLSSPSPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSA 100
           T  + +++S  P   LTQ++LKK+AA KAV+ V+SGMV+GLGTGSTA  AV+RI ELL  
Sbjct: 12  TEDLAAVNSAPPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLRE 71

Query: 101 GKLTNIVGIPTSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALL 160
           GKL +I+GIPTS  T EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LL
Sbjct: 72  GKLKDIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLL 131

Query: 161 REKMVEAASDKFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAK 220
           REKM+E AS KF+V+VD++KLV  +GGS LA+PVEVV FC  +   +L+E+F++ GC AK
Sbjct: 132 REKMIEGASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAK 191

Query: 221 LRME-----GDSSPYVTDNSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASE 280
           LRM+      +++P VTDN NY+VDLY    I D E A   I    GVVEHG+FLGMA+ 
Sbjct: 192 LRMKIGSNGEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATT 251

Query: 281 VIIAGKTGVSVKTK 290
           +I+AGK GV+VK +
Sbjct: 252 LIVAGKFGVTVKDR 265
[Close]
BLAST of Spo18400.1 vs. TAIR (Arabidopsis)
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.000e-24
Identity = 87/291 (29.90%), Postives = 147/291 (50.52%), Query Frame = 1 

		  

Query: 8   LLPSTSSTTFNRHATTKLLNLKFLHNHRNKPFFTTTIKSLSSPSPTPVLTQDDLKKLAAE 67
           ++ +T+ST F+  ++            R + F    + +  SP  +P+L        AA 
Sbjct: 1   MVTATASTPFSLSSSVVFT--------RRRNFKRFPVCASLSPEVSPLLR-------AAH 60

Query: 68  KAVDS-VKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTAEQAASLGIPL 127
             VD+ VKSGM++GLG+G  + FA+  +G+ L +G L N+VG+P S R+A +AA  GIPL
Sbjct: 61  HTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPL 120

Query: 128 SVLDDHPRIDLAIDGADEVDPD-LNLVKGRGGA------LLREKMVEAASDKFIVVVDDT 187
               D  +ID A   AD V+ + L  V GR  +      +L++K +   +D+ + ++ + 
Sbjct: 121 EYYRDGVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEE 180

Query: 188 KLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIF---KELGCEAKLRME---GDSSPYVTD 247
           +   GL GS   +PV V    W    + + +++    E+   A +  E   G   P VT 
Sbjct: 181 QYKAGLEGS---IPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTS 240

Query: 248 NSNYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGV 285
           + + I+D+ F T I+        +  ++GVV+HGL +     V+IA +T V
Sbjct: 241 DGHNILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEETVV 273
The following BLAST results are available for this feature:
BLAST of Spo18400.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|18654317|gb|AAL77589.1|L43068_12.8e-154100.chloroplast ribose-5-phosphate... [more]
gi|731328476|ref|XP_010675073.1|2.8e-13891.4PREDICTED: probable ribose-5-p... [more]
gi|720000856|ref|XP_010256162.1|4.3e-11076.4PREDICTED: probable ribose-5-p... [more]
gi|976900599|gb|KVH88779.1|1.3e-10670.8Ribose 5-phosphate isomerase, ... [more]
gi|743760721|ref|XP_010938460.1|2.9e-10673.7PREDICTED: probable ribose-5-p... [more]
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BLAST of Spo18400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q8RU73_SPIOL2.0e-154100.Chloroplast ribose-5-phosphate... [more]
A0A0J8CIK6_BETVU2.0e-13891.4Uncharacterized protein OS=Bet... [more]
A0A118JS96_CYNCS8.9e-10770.8Ribose 5-phosphate isomerase, ... [more]
A0A103LWJ6_CYNCS5.8e-10673.5Ribose 5-phosphate isomerase, ... [more]
A0A0A0LFJ4_CUCSA6.4e-10573.1Uncharacterized protein OS=Cuc... [more]
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BLAST of Spo18400.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RPI3_ARATH5.8e-9974.9Probable ribose-5-phosphate is... [more]
RPI2_ARATH4.1e-8162.4Probable ribose-5-phosphate is... [more]
RPI1_ARATH2.8e-7759.8Probable ribose-5-phosphate is... [more]
RPIA_SYNJA6.7e-5551.9Ribose-5-phosphate isomerase A... [more]
RPIA_ROSCS1.0e-5049.7Ribose-5-phosphate isomerase A... [more]
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BLAST of Spo18400.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G04790.13.2e-10074.9Ribose 5-phosphate isomerase, ... [more]
AT2G01290.12.3e-8262.4ribose-5-phosphate isomerase 2[more]
AT1G71100.11.6e-7859.8Ribose 5-phosphate isomerase, ... [more]
AT5G44520.11.0e-2429.9NagB/RpiA/CoA transferase-like... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004788Ribose 5-phosphate isomerase, type APANTHERPTHR11934RIBOSE-5-PHOSPHATE ISOMERASEcoord: 2..289
score: 1.6E
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 108..283
score: 7.6
IPR004788Ribose 5-phosphate isomerase, type ATIGRFAMsTIGR00021TIGR00021coord: 61..284
score: 9.0
IPR020672Ribose-5-phosphate isomerase, type A, subgroupHAMAPMF_00170Rib_5P_isom_Acoord: 58..287
score: 30
NoneNo IPR availableGENE3D3.30.70.260coord: 198..267
score: 2.0
NoneNo IPR availableGENE3D3.40.50.1360coord: 60..197
score: 3.4
NoneNo IPR availablePANTHERPTHR11934:SF0RIBOSE-5-PHOSPHATE ISOMERASEcoord: 2..289
score: 1.6E
NoneNo IPR availableunknownSSF100950NagB/RpiA/CoA transferase-likecoord: 57..199
score: 4.19E-42coord: 230..240
score: 4.19
NoneNo IPR availableunknownSSF75445D-ribose-5-phosphate isomerase (RpiA), lid domaincoord: 190..270
score: 1.16

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015976 carbon utilization
biological_process GO:0015979 photosynthesis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006810 transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000914 phragmoplast assembly
biological_process GO:0010342 endosperm cellularization
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0008152 metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0009658 chloroplast organization
biological_process GO:0010155 regulation of proton transport
biological_process GO:0030154 cell differentiation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0006457 protein folding
biological_process GO:0006508 proteolysis
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010206 photosystem II repair
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0009744 response to sucrose
biological_process GO:0009644 response to high light intensity
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0015693 magnesium ion transport
biological_process GO:0060003 copper ion export
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0046939 nucleotide phosphorylation
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0050832 defense response to fungus
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0046500 S-adenosylmethionine metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0046034 ATP metabolic process
biological_process GO:0006479 protein methylation
biological_process GO:0006354 DNA-templated transcription, elongation
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005618 cell wall
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009507 chloroplast
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0010287 plastoglobule
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005730 nucleolus
cellular_component GO:0044464 cell part
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0016020 membrane
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005737 cytoplasm
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0008430 selenium binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008693 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function GO:0004008 copper-exporting ATPase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0015095 magnesium ion transmembrane transporter activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016597 amino acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo011290.82Barchart | Table
Spo076630.80Barchart | Table
Spo046530.78Barchart | Table
Spo102350.77Barchart | Table
Spo216600.76Barchart | Table
Spo025730.76Barchart | Table
Spo169550.75Barchart | Table
Spo237210.74Barchart | Table
Spo201520.74Barchart | Table
Spo172490.74Barchart | Table
Spo017140.74Barchart | Table
Spo208490.74Barchart | Table
Spo102850.73Barchart | Table
Spo266970.72Barchart | Table
Spo060310.72Barchart | Table
Spo131930.72Barchart | Table
Spo051030.72Barchart | Table
Spo146780.72Barchart | Table
Spo136910.72Barchart | Table
Spo247320.72Barchart | Table
Spo094480.71Barchart | Table
Spo095540.71Barchart | Table
Spo050730.71Barchart | Table
Spo233630.71Barchart | Table
Spo160790.70Barchart | Table
Spo300040.70Barchart | Table
Spo181950.70Barchart | Table
Spo109500.70Barchart | Table
Spo123700.70Barchart | Table
Spo257210.70Barchart | Table
Spo208690.69Barchart | Table
Spo240460.69Barchart | Table
Spo244250.69Barchart | Table
Spo060040.69Barchart | Table
Spo117390.69Barchart | Table
Spo212150.69Barchart | Table
Spo008720.68Barchart | Table
Spo072970.68Barchart | Table
Spo073060.68Barchart | Table
Spo114460.68Barchart | Table
Spo122490.68Barchart | Table
Spo125030.68Barchart | Table
Spo133930.68Barchart | Table
Spo178600.68Barchart | Table
Spo235310.68Barchart | Table
Spo243250.68Barchart | Table
Spo019230.67Barchart | Table
Spo256920.67Barchart | Table
Spo104040.67Barchart | Table
Spo130290.67Barchart | Table
Spo093350.67Barchart | Table
Spo013220.66Barchart | Table
Spo123020.66Barchart | Table
Spo104930.66Barchart | Table
Spo074760.66Barchart | Table
Spo035720.66Barchart | Table
Spo021860.66Barchart | Table
Spo189580.66Barchart | Table
Spo153720.65Barchart | Table
Spo260060.65Barchart | Table
Spo037570.65Barchart | Table
Spo270810.65Barchart | Table
Spo087890.65Barchart | Table