Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATATTTTAATAAATTAGTCAGAACATAGAAAACAAATTATATAGTATCATCCGTGCGTTAGACGGACATAACCTAGTTGATTTAAAAATTGAACCCACTTTCTGAAGTGACCCAAATGACCCAACAAGCTTTTATTACTCCGTATTATCATTTTATGTTTTGCCAATGTGAAAAAGTGTATGCTCTATTTCCTTTTGTACTCTTGGTTCCTTGATGATACTCCAATAAGATTATTATCAAAATCACATCCGAATGAACATTTTTTTTTTAAACCAAAAAAAATCAATCTTTTCCCCTCATCCTTAAATTGGCTGACTCATTCTTCCATCCCCAATTTTATCTCCATCCCCATTTCCCAAACAAAATATAAACAAAATCATACCACCAGCAAATCAACACCCAAAAACCGTTTAAAAGAAACCCCCTCCAAAAAAATCAAAATCCACAAAATTAAACTTTACTGAAATCAAATATGGCAAAAGGGGTTGGGCAAATGGCGAAGGCAGCCGTAGGAGACGCAATTATGTCCTTCGGATGGATGTTTACGGCTCCGACACTCGGTGTCGCCACCTCGATCGCGGCGACGGCTTTTGGGGTGGAGAAGGAAAGTCACTTGATCCACGCCATCTTCGCCGCTGTTATAATGGTTCACATAGTATTTTGTGATAGTATGGCGGTGGTGCTTGGTGGGGCTAGCTTTAATCCCACTGCTAACGCCGCCATGTATACTGCCGGTATCGGTGAGGATACTCTTTTGTCCATGGCCCTTCGCTTTCCTGCCCAGGTAATATATCTCCAGACTTTTTAATTAATGAATTTAATACTCCTACTCCTTGTGAATGTACTCTACTTCATTTACTTGATTGCTTCTAGTCTATATATTACTCCACCTAATTCGACACTCCGAACATATAGGCACTTCATTTTAGGCTAAAATCATGCAAAATTTTCGTAAAATAGTTGAGTCGTATGCGTAACATAACCTCTAGTAGCAAAATTACTGTGTTTTGATGCAAGATATAATACAATCCCATAAATTTTGGTGAAAAACAGTAGTTTAGTTTATGTAAACTCTATTAGTATCATCTTTAGTTGGAATGTTTATTTGATAAGTGATTGGTCAAAATTAGTACTGTACTAATTTATCGTCACCACGGATAACTTTTTTTATAGAATTGTACGGATCAAAATCAAGAGTGATGGTAAAGGTCGCAAGTTGCGACAACATTTAGGTGTCGTAATATTACATGTCGAAATTTAATTGATACATATAGGCGACACATAGGCTATGAGTCATCATCATATTTTTACTATCAATGCAATATTTTTACTATGAAAATACGTAAATAAAGTAGTCGATAAAAAAAAAGGAAAGAAATTAGAATATTGAGTTTTTCTACCATTTTTTGAAACATGTATAATAGGATATATATGTTAAATATTTTAATTTCCAATTTAAATCATGACACGTGAGCACAGCATGTCATCATTGTGACACAGCTTAAAGGTCGCATGTTGCGACCTTTATCATTTTCGCAAAATCAATATGTAGTTGGGTTAATCAGAGGTGGGTTCTGGCTCGGCTAATAGGGGTTAATAAGTGGACCAACGAACTATAGCTCATGGGAGAATAATTCAATAATCTAATACAAATAGTTAGTCAAACCAATTGAGTAGACCACTTAATCGGCAATAAAAAAAAAATGCCAAAACGCAGAGATTGATCGAATTGTAGGCGATGGTTGAATGGAGGATGGGAATGTAACGTCCTATAGATCCACCAAATGTTCAAAATGGATTAAATGCAAAAAAGGTGCTCAAACTCATCATAAAATTTAAACTAGAACAAATTTCTATACTGTCGAAAGAAGTAGAACAACTAATGTATCTGGAGGGATTGATATTTTAACTATCTCCTCAAGCTTGACTGGGTTTCGTTTGGCATGGCCGAAAGTGTTTTTAGTAAAAAGTGATTTTCCTATGAAAAAAATACAACTCCAAACTAGGGTTCTTTTGTTTGGTTCCTTATTAAAGAATTATAGGAAAAAGAAAAAATGAGGGTAGACGTGTGAGGTTTATGAAAATAGAGAAGATGAAGGTAAGGAGGAAGATTGGAAAAATGGGTTTTCTTCATTTCAAATGGAAAATGTTTACACTATTTGAGAGTTATTGGAATTTTTACACACGTTCTATAATAATTTTTCATGTAAATATTTTACACCAAACCAAATATTCTTGAACAATTGTTAGTCTATGGGCTTAGGCTCTGTGCCTTAATTCAGTTTGTAACTTCAGTTGTATTACAGTTGATGTACTATAGAACATATTAAATGCAATCTCTTATATCTGAGAAAATGTGATATGGATCATCAATGAACATAAAAATGCCTTAAATTTTGAGTGCATTGTACATTCGGCTATTCATACGAGTGTACAATTCAACAAACTAATTTGATTTCACCTAGTGAGGATGTTTTGGGAAGTGGATCCTCTTATCTTTACCCCGCTCTTAAATCTTGGACAATTTTTATACTACCGGTTAAAATAAGCAAGGTACAACCAATTGTATTATGATTTATGAACCCATAATAAATCGGTCTGAATCTTTATCTGGCCCTTTGCCCTTACCTTAAAATCGTGGTTTGTTAAAGAGTAGTGGCTGTTAGACAATTGCCTGTTAGTTCAGTGATGATTGAGACTGAACTTGATAGGGAGAACCCCGTATTCGATTCCGCGCAACAATAATTGGGAGGAGATTAGAACTTATCAACTCAGAACTCACCCTGAATCCGAATTATCTTTAAAGGTAAATCGGGTACTAACCCACACAGAAAGAAAGGAAAAAAAAGAGAGAGAGAGCAGTGGCGGCCGTGGGAGATAGTTTGTTAATCGGTGCACATGGTCCATCGTCGTAAATCGTACTGTAATAAAAACACCTAAAAGAATACTCCATTAAGATACAAAATAAGGAGTACTCCGTATCATTCTCCAACTTTTTTTCTTCTTTTAATTAATTAAAGGGATGTATGACGAATTAAAGTTGCGTCTGCCAGTCTGTCCATATGATCAGCTACCAGATTTTGATACCATTTATCGAGGCTGGATCTTAAAAGTAGCCCGATGCCCCCTTTTGGTTTAACACATAATAATACGGAGTACAAGAGAAAACCAACTAATACAAAGAAAACCAACTAATACAACTGGAAATCCACCATTGCTTAACTAACAGTACCTCAATTGTGATCTTAAACAGTTTTGCGAGTAGGGACAGTAAAAAAATTAAGTAATATAGTATACAGTTTATACAATCTACACGAGTTCGGATCTTCTAGACTTTTAATAAAACTCTACAAGGTAGAGTTGTATCTAAACCATTTATTTTAAAATCAATGACTCATATTATTGGGAGAGGAAAATCAGGGAATGGATATTGATGAGAAAAAATAGGGGGAATTTTAGAAATATAATAAATGAGCCATTGATTTTTCAATCGATGATTGTTATTACTCAAACTCTACCTTGTAGAGTTTTATTAAAACTCTAGAGGATCCAAAACCAATCTACACCAATTCTAAATTCATTTTAGTTTTCTTGTATGATACTCGTACTCATCAAACCATGTTATTAATGGCCCTATTTTAAAGTACTCTTTCACTCTGTATTTATTTAAGGGATACACTTGCCTTTTCCGGTCGTATTTATTTAAGAGATACAATTGCCATGTTTAGTAACTTATCAACCCCACAATCTAATTAAATAATATATTTACACCCCACCCCCACCCTACACTCCCTAAAATGACATGGTCCCTACTTGTTTTTCTTATTAAAATATCTACTCAACCCCACTTGTTTTATTACTTTATTTCATTCAATTCTTTTTCTTAATACCCGTGTCCGGTCAAGTGTATCTCTTAAATAAATACGGAGGGAGTATAAATCTAATGATACACAAAGTAAAAATAATAAAGTGAGGTAGGATGCATATCGTGTAATTAAAATTTCACGTGGCACACTTTGACGCTTGATAATATCTTTGTTTTAAAATGTAGCCATCTAAATTGAAGCAAAAGGTCTTACGCGCACTAGGTGTACAATAAATTTATTGTATACCAAGATAACTTTTACCCATTTTTTTGTAACTTTAACCTAGTTTTGATTAACTTTTATATTAGTTAAAAAAACGACGTTGATAGATAAACCTTTTAAAGAGTTAAATGATTAATTTAATACATTATTATGATTTTGAAGAAATAAGTTTTATTAAAATGAAAAAATTTATCACTAAAAAATGGATAATTTTTACACATATAAGTTTAACTTTTAAACATTTTGAGTTAACTTTTACTCTGGTGTACAATATTTATTGTACAACACTTGTAAATAAGAATTTGTGAAATTGAAGGACCCTCCCTCCTCCAGTCCTCCTCATTACTTCCAAGACTTCTACTCTTTCTTTTGTCGTTTGAAGGCCCTTCACAAGTTTTTCAATTACAACAACATAGACTATAGGAGTTTGCACCCCAGCAAAAAAAGAAGAAAAAAACGTAAGACTATCGGAGTAAGGCCATGTTTAGTTCACCTTATTTCTCCTGATATGGTCTGGTCTGATATGGTCTGGTCTGAATTTATTTTTTCTGATCTAATCTAATCTGAACTTATTTTTTCTGATCTAATCTGGTCTGATTTGATCTGGTCCGATTTGATCTGATCTGGTCTAGTCTGATCTGATCTGATTCTTCAAAATTAAGTTTAAACAAAAATCTACATTTATTAATATTAAACCACTTACGTGTAAAATAAATGTTACACAAATTTATAATATTGTTATTATTTATTTGACTTTGTTCATGATTTAACTATTTCTTATATTAAATAGACCTATACATAATCTAGATGGATCGGTTATGATCTAGACATATAAGTTCTGATCTAGACATATAAGTTCTGATCTGGATATAATCTGTACAGATCGGTTCTGATCTAGACATGATTTGTACATATCAGAAATAATAGTAATAAAATATTAAATATAATAACAACGATATAAACATATACAATATGGTCTGGTCTGATCTGGTCTGATCTGATCTGAACTTATTTTTTCTGATCTGAACTTATTTTTTCTGATCTGATCTGGTCTGGTCTGATCTGATTAAATCTGAAATAAGGTGAACTAAACAGGGCCTAAATGCTAACTGAAATGGGGATGAAAATCTAAAATTTCCCAGCATACTGCCCATACAAATAATGTAATGAAACAGAAGTAATATACTTTAATAAAACCTAATAATATTTTGTAACATACCCATTATTAGATACCAATTGAGAAGTTGTCTAGGCCGCTGGTCACCGGCGATAAAGTCATCCATATACATTGGTAAAATGCTACTTTCACTCAATGCGTTGAAAAATCAAACAAAATACAAAGTATGGATAAAAATGACAGTAATTAATACAACAATGACAGTATTTTAATACAACAATGACAATATTTATACAACAATGACAATACTTATATTATTATATAACAAGTTATCAATATTTGTACACATTATTTAAGGGTGGGCTATCTTTTCATTTTTTTTTTAAAGAATGGATATGGATGATTTTGTCGTTGGTGACCGGCGACCTAGACAACCTCATTAATTGACGTCCTTAACATTCCTAAATTGTTGAAAATGTGACAGAATGCTGGTCTCCAACACACAGAGTAA AAAAAAATATTTTAATAAATTAGTCAGAACATAGAAAACAAATTATATAGTATCATCCGTGCGTTAGACGGACATAACCTAGTTGATTTAAAAATTGAACCCACTTTCTGAAGTGACCCAAATGACCCAACAAGCTTTTATTACTCCGTATTATCATTTTATGTTTTGCCAATGTGAAAAAGTGTATGCTCTATTTCCTTTTGTACTCTTGGTTCCTTGATGATACTCCAATAAGATTATTATCAAAATCACATCCGAATGAACATTTTTTTTTTAAACCAAAAAAAATCAATCTTTTCCCCTCATCCTTAAATTGGCTGACTCATTCTTCCATCCCCAATTTTATCTCCATCCCCATTTCCCAAACAAAATATAAACAAAATCATACCACCAGCAAATCAACACCCAAAAACCGTTTAAAAGAAACCCCCTCCAAAAAAATCAAAATCCACAAAATTAAACTTTACTGAAATCAAATATGGCAAAAGGGGTTGGGCAAATGGCGAAGGCAGCCGTAGGAGACGCAATTATGTCCTTCGGATGGATGTTTACGGCTCCGACACTCGGTGTCGCCACCTCGATCGCGGCGACGGCTTTTGGGGTGGAGAAGGAAAGTCACTTGATCCACGCCATCTTCGCCGCTGTTATAATGGTTCACATAGTATTTTGTGATAGTATGGCGGTGGTGCTTGGTGGGGCTAGCTTTAATCCCACTGCTAACGCCGCCATGTATACTGCCGGTATCGGTGAGGATACTCTTTTGTCCATGGCCCTTCGCTTTCCTGCCCAGAATGCTGGTCTCCAACACACAGAGTAA ATGGCAAAAGGGGTTGGGCAAATGGCGAAGGCAGCCGTAGGAGACGCAATTATGTCCTTCGGATGGATGTTTACGGCTCCGACACTCGGTGTCGCCACCTCGATCGCGGCGACGGCTTTTGGGGTGGAGAAGGAAAGTCACTTGATCCACGCCATCTTCGCCGCTGTTATAATGGTTCACATAGTATTTTGTGATAGTATGGCGGTGGTGCTTGGTGGGGCTAGCTTTAATCCCACTGCTAACGCCGCCATGTATACTGCCGGTATCGGTGAGGATACTCTTTTGTCCATGGCCCTTCGCTTTCCTGCCCAGAATGCTGGTCTCCAACACACAGAGTAA MAKGVGQMAKAAVGDAIMSFGWMFTAPTLGVATSIAATAFGVEKESHLIHAIFAAVIMVHIVFCDSMAVVLGGASFNPTANAAMYTAGIGEDTLLSMALRFPAQNAGLQHTE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18500.1 vs. NCBI nr
Match: gi|902213846|gb|KNA17350.1| (hypothetical protein SOVF_080730 [Spinacia oleracea]) HSP 1 Score: 198.4 bits (503), Expect = 6.800e-48 Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 1
BLAST of Spo18500.1 vs. NCBI nr
Match: gi|731318174|ref|XP_010669579.1| (PREDICTED: aquaporin SIP1-2 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 152.5 bits (384), Expect = 4.300e-34 Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 1
BLAST of Spo18500.1 vs. NCBI nr
Match: gi|870866691|gb|KMT17624.1| (hypothetical protein BVRB_2g035730 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 132.9 bits (333), Expect = 3.500e-28 Identity = 65/90 (72.22%), Postives = 75/90 (83.33%), Query Frame = 1
BLAST of Spo18500.1 vs. NCBI nr
Match: gi|901814741|gb|KMZ69110.1| (Aquaporin-like superfamily protein [Zostera marina]) HSP 1 Score: 91.7 bits (226), Expect = 9.000e-16 Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of Spo18500.1 vs. NCBI nr
Match: gi|702246008|ref|XP_010054268.1| (PREDICTED: aquaporin SIP1-1 [Eucalyptus grandis]) HSP 1 Score: 88.6 bits (218), Expect = 7.600e-15 Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 1
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD12_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080730 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 4.800e-48 Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 1
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035730 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.500e-28 Identity = 65/90 (72.22%), Postives = 75/90 (83.33%), Query Frame = 1
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Match: A0A0K9PLM1_ZOSMR (Aquaporin-like superfamily protein OS=Zostera marina GN=ZOSMA_221G00210 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.300e-16 Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Match: A0A059DGW9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02066 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.300e-15 Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 1
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Match: A0A059DHD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02066 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.300e-15 Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 1
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Match: SIP12_ARATH (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.000e-11 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Match: SIP11_MAIZE (Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.100e-10 Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 1
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Match: SIP11_ARATH (Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.500e-10 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 3.100e-8 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of Spo18500.1 vs. TAIR (Arabidopsis)
Match: AT5G18290.1 (Aquaporin-like superfamily protein) HSP 1 Score: 70.9 bits (172), Expect = 5.800e-13 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Spo18500.1 vs. TAIR (Arabidopsis)
Match: AT3G04090.1 (small and basic intrinsic protein 1A) HSP 1 Score: 67.0 bits (162), Expect = 8.400e-12 Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18500.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18500.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18500.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18500.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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