Spo18520 (gene) | SpinachBase

Overview


Name	Spo18520
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	CASP-like protein
Location	chr3 : 20059659 .. 20061316 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATAATTAGCTAGCGTTAACCCACTAAAATTCAGAGCTTAATTAATTAATTAATTAATTAATAATGTCATCGATGGAGAGTGAGAAGGGAACAGTAGTAGCACCCCCTGCAGCTGAGAATGGTAATAATAAAAAATGTGGTGGAGTTGATGTGATACTTAGAGTTTTATTGTTGGCAGCATCTATTGCAGCGGTTGTGGTTATGGTTACAAGCAACCAGACTGAAACTGTTCCTACTCCTCGTGGTCCGATGCGTGCACCGGCTAAATTTCACCATTCCCCTGCCTTTATGTAAGTAAGCCAACCCTTTCAACTTCAAATTACTTACTTTGTTTTATGCAAAATATGCCATGCATGGTATTAATTGGTACGTACGTATATATATAATTACTCATCTTTTAGTATAGTATCTACATCGATCACATGCATATATATAGTACCAAGTACTATATGAAAATCTACCAATTATGCATAATGAATAAAGTCTTAACAAAAACATATTTTATAGCCTCCGTTCTATTGGACTTATTTTGACTCATCTTATATTATCTGAACTTATTTTATATGGAAAAAACTAATTTTGTCTAAAATAAACTTATATGACTTGATCCCTTTTTACAGATACTTTGTGGTAGCACTATCGATTACTGGTGTGTACAGTATCATCACATCAATTGCATCGTTGTCCTCGATGAGGAAGTCTAAAGTCCCAGCCAAATTGTTCTGGATTTTACTTCTACACGATGTGGTAAGCTAGCTAGCTTTTTACAAGTACGATAAGATAGATCATATACTCCCTCCGTCCCGGAATACTCGCAACGGTTTGACTTTTTGCACTATTCACATAATTCACTTTGTTCCTTTTTTATTTATAGTATATGAAAATATAATATATTGTTGGCTTCATCTTAATATAAATTTTCAAAATATTAATATTTGATAAGTTTTTATAATATATAATTGAAGATATTGATGGTCAAAGTTGTGCATTGGCAAGCGTGTGTAATCAAACCGTTGCGAGTATTCCGGGACGGAGGGAGTACTACTTAGTACTGTATAATGGTTTATTGTTTAGATTTAAAAACAAAATAATAAAATTGGTGATGGAATTGCAGCTAATACTGGGCATAGTAGCTTCAGCAACAGGCGCAGCTGGTGGGGTTGGATACATTGGTCTAAAAGGGAATACACATGTTCGATGGATGAAAATTTGTAATCTTTACGGCAAATTTTGCCGACACATTGGAGCTTCCATTCTTGTTTCGTTGTTCGCTGCCGTCGTGCTCGTACTCCTCGTCGTTCTTGATGGCTATTCTCTTTACCGACGTATTCCTGCATCCTAACTCCACCCACCCCATCCATGCATTAATATATTATTAGTGTTTCATTTAAGTTATCAGGTGTAATTATATTCTGTACTAGTCTTTCATTTATTTCTTTGTATATTACTAGTGTCATCATATATAGTGTCATTCTTGTTGGTGTTCCAATTTGCGGCCTTGTGTTCATTATTGAAGGTACATTTTGATCTCCGCTTCATAATCTTCTTATACCTCATTGCCAAATCAACAACATCATCAAAGTAACATACTTTTAATATATATACAAATTTGTTAGCTACGTCCAGCTCTGATTAGGAAAGTAAAACTAGACGAC

mRNA sequence

CCAAATAATTAGCTAGCGTTAACCCACTAAAATTCAGAGCTTAATTAATTAATTAATTAATTAATAATGTCATCGATGGAGAGTGAGAAGGGAACAGTAGTAGCACCCCCTGCAGCTGAGAATGGTAATAATAAAAAATGTGGTGGAGTTGATGTGATACTTAGAGTTTTATTGTTGGCAGCATCTATTGCAGCGGTTGTGGTTATGGTTACAAGCAACCAGACTGAAACTGTTCCTACTCCTCGTGGTCCGATGCGTGCACCGGCTAAATTTCACCATTCCCCTGCCTTTATATACTTTGTGGTAGCACTATCGATTACTGGTGTGTACAGTATCATCACATCAATTGCATCGTTGTCCTCGATGAGGAAGTCTAAAGTCCCAGCCAAATTGTTCTGGATTTTACTTCTACACGATGTGCTAATACTGGGCATAGTAGCTTCAGCAACAGGCGCAGCTGGTGGGGTTGGATACATTGGTCTAAAAGGGAATACACATGTTCGATGGATGAAAATTTGTAATCTTTACGGCAAATTTTGCCGACACATTGGAGCTTCCATTCTTGTTTCGTTGTTCGCTGCCGTCGTGCTCGTACTCCTCGTCGTTCTTGATGGCTATTCTCTTTACCGACGTATTCCTGCATCCTAACTCCACCCACCCCATCCATGCATTAATATATTATTAGTGTTTCATTTAAGTTATCAGGTGTAATTATATTCTGTACTAGTCTTTCATTTATTTCTTTGTATATTACTAGTGTCATCATATATAGTGTCATTCTTGTTGGTGTTCCAATTTGCGGCCTTGTGTTCATTATTGAAGGTACATTTTGATCTCCGCTTCATAATCTTCTTATACCTCATTGCCAAATCAACAACATCATCAAAGTAACATACTTTTAATATATATACAAATTTGTTAGCTACGTCCAGCTCTGATTAGGAAAGTAAAACTAGACGAC

Coding sequence (CDS)

ATGTCATCGATGGAGAGTGAGAAGGGAACAGTAGTAGCACCCCCTGCAGCTGAGAATGGTAATAATAAAAAATGTGGTGGAGTTGATGTGATACTTAGAGTTTTATTGTTGGCAGCATCTATTGCAGCGGTTGTGGTTATGGTTACAAGCAACCAGACTGAAACTGTTCCTACTCCTCGTGGTCCGATGCGTGCACCGGCTAAATTTCACCATTCCCCTGCCTTTATATACTTTGTGGTAGCACTATCGATTACTGGTGTGTACAGTATCATCACATCAATTGCATCGTTGTCCTCGATGAGGAAGTCTAAAGTCCCAGCCAAATTGTTCTGGATTTTACTTCTACACGATGTGCTAATACTGGGCATAGTAGCTTCAGCAACAGGCGCAGCTGGTGGGGTTGGATACATTGGTCTAAAAGGGAATACACATGTTCGATGGATGAAAATTTGTAATCTTTACGGCAAATTTTGCCGACACATTGGAGCTTCCATTCTTGTTTCGTTGTTCGCTGCCGTCGTGCTCGTACTCCTCGTCGTTCTTGATGGCTATTCTCTTTACCGACGTATTCCTGCATCCTAA

Protein sequence

MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIPAS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18520.1	Spo18520.1	mRNA

Homology

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BLAST of Spo18520.1 vs. NCBI nr
Match: gi|902237502|gb|KNA24831.1| (hypothetical protein SOVF_012170 [Spinacia oleracea])

HSP 1 Score: 365.5 bits (937), Expect = 5.600e-98
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60
           MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR
Sbjct: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60

Query: 61  GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 120
           GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI
Sbjct: 61  GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 120

Query: 121 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 180
           LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV
Sbjct: 121 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 180

Query: 181 LDGYSLYRRIPAS 194
           LDGYSLYRRIPAS
Sbjct: 181 LDGYSLYRRIPAS 193

[Close]

BLAST of Spo18520.1 vs. NCBI nr
Match: gi|731372590|ref|XP_010666392.1| (PREDICTED: CASP-like protein Ni6 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 240.4 bits (612), Expect = 2.700e-60
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVV---APPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVP 60
           MSSME+EKG V    APP A   N  +   VDVILRVLLLAASIA+VV+MVTS QTE + 
Sbjct: 1   MSSMETEKGAVPTPQAPPVAPTDNKYRV--VDVILRVLLLAASIASVVLMVTSKQTEIIV 60

Query: 61  TPRGPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHD 120
           +P G     AKF +SPAFIY V ALS+ G+YSIIT++ SLS M K  V  KLFWILL+HD
Sbjct: 61  SPLGSRPNAAKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMMKPIVAPKLFWILLIHD 120

Query: 121 VLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVL 180
           VL+LGIVA+ATG AGGVGYIGLKGNTHVRW KICN+Y KFCRH+GASI+VSLFAAVVLVL
Sbjct: 121 VLLLGIVAAATGTAGGVGYIGLKGNTHVRWGKICNVYDKFCRHVGASIIVSLFAAVVLVL 180

Query: 181 LVVLDGYSLYRRIP 192
           LV ++  SLYRRIP
Sbjct: 181 LVFVNANSLYRRIP 192

[Close]

BLAST of Spo18520.1 vs. NCBI nr
Match: gi|341958524|sp|D2KQI6.1|CSPL1_BETVM (RecName: Full=CASP-like protein Ni6; AltName: Full=CASP-like protein 1D1; Short=BvCASPL1D1)

HSP 1 Score: 239.2 bits (609), Expect = 6.000e-60
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVV---APPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVP 60
           MSSME+EKG V    APP A   N  +   VDVILRVLLLAASIA+VV+MVTS QTE + 
Sbjct: 1   MSSMETEKGAVPTPQAPPVAPTDNKYRV--VDVILRVLLLAASIASVVLMVTSKQTEIIV 60

Query: 61  TPRGPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHD 120
           +P G     AKF +SPAFIY V ALS+ G+YSIIT++ SLS MRK  VP KLFWILL+HD
Sbjct: 61  SPFGSRPNAAKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHD 120

Query: 121 VLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVL 180
           VL+LGIVA+ATG AGGVGYIGLKGNTHVRW KI N+Y KFCRH+GASI+VSLFAA VLVL
Sbjct: 121 VLLLGIVAAATGTAGGVGYIGLKGNTHVRWGKIRNVYDKFCRHVGASIIVSLFAAAVLVL 180

Query: 181 LVVLDGYSLYRRIP 192
           LV ++  SLYRRIP
Sbjct: 181 LVFVNANSLYRRIP 192

[Close]

BLAST of Spo18520.1 vs. NCBI nr
Match: gi|747086676|ref|XP_011090848.1| (PREDICTED: CASP-like protein 1 [Sesamum indicum])

HSP 1 Score: 191.8 bits (486), Expect = 1.100e-45
Identity = 104/179 (58.10%), Postives = 129/179 (72.07%), Query Frame = 1

		  
Query: 15  PAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAP--AKFHHS 74
           PA    +++     DV+LR LL A+ + AVVVMVTS QTE +P P  P   P  AKF HS
Sbjct: 28  PAERAPSSRSFAAADVVLRFLLFASGVVAVVVMVTSKQTELIPIPIPPFLTPRPAKFTHS 87

Query: 75  PAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAG 134
           PAFIYFV ALS+ G+Y  IT++ SL ++RK     +     ++ DVL+LGIVA+ATG AG
Sbjct: 88  PAFIYFVAALSVAGLYGAITTLISLFALRKPASYPRFLSHFVIFDVLLLGIVAAATGTAG 147

Query: 135 GVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
           GV YIGLKGNTHV+W KIC++YG+FCRHIGASI VSLF +VVL LLV+L  YSL +RIP
Sbjct: 148 GVAYIGLKGNTHVQWRKICDIYGEFCRHIGASIAVSLFGSVVLALLVLLSIYSLSKRIP 206

[Close]

BLAST of Spo18520.1 vs. NCBI nr
Match: gi|951003712|ref|XP_014507677.1| (PREDICTED: CASP-like protein 1D1 [Vigna radiata var. radiata])

HSP 1 Score: 188.7 bits (478), Expect = 9.300e-45
Identity = 96/163 (58.90%), Postives = 125/163 (76.69%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR LL AAS+ +VVV+VT N+T+ +P PR     PAKF +SPAF+YFV ALS+ G+Y
Sbjct: 31  DVILRFLLFAASLVSVVVIVTGNETKYIPLPR-----PAKFRYSPAFVYFVAALSVAGLY 90

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTHVRWM 148
           SIIT++ASL +++   + AKL    +L D LILGI+ASATG AGGV Y+GLKGN HV W 
Sbjct: 91  SIITTLASLYAIKNPALKAKLLLYFILWDALILGIIASATGTAGGVAYVGLKGNKHVNWN 150

Query: 149 KICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
           KICN+Y KFCRH+GAS+ V+LF ++V VLL+ +  YSL+ R+P
Sbjct: 151 KICNVYDKFCRHVGASVAVALFGSIVTVLLIWISAYSLHSRVP 188

[Close]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZ96_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_012170 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 3.900e-98
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60
           MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR
Sbjct: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60

Query: 61  GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 120
           GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI
Sbjct: 61  GPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 120

Query: 121 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 180
           LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV
Sbjct: 121 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 180

Query: 181 LDGYSLYRRIPAS 194
           LDGYSLYRRIPAS
Sbjct: 181 LDGYSLYRRIPAS 193

[Close]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B588_BETVU (CASP-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_001770 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.900e-60
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVV---APPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVP 60
           MSSME+EKG V    APP A   N  +   VDVILRVLLLAASIA+VV+MVTS QTE + 
Sbjct: 1   MSSMETEKGAVPTPQAPPVAPTDNKYRV--VDVILRVLLLAASIASVVLMVTSKQTEIIV 60

Query: 61  TPRGPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHD 120
           +P G     AKF +SPAFIY V ALS+ G+YSIIT++ SLS M K  V  KLFWILL+HD
Sbjct: 61  SPLGSRPNAAKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMMKPIVAPKLFWILLIHD 120

Query: 121 VLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVL 180
           VL+LGIVA+ATG AGGVGYIGLKGNTHVRW KICN+Y KFCRH+GASI+VSLFAAVVLVL
Sbjct: 121 VLLLGIVAAATGTAGGVGYIGLKGNTHVRWGKICNVYDKFCRHVGASIIVSLFAAVVLVL 180

Query: 181 LVVLDGYSLYRRIP 192
           LV ++  SLYRRIP
Sbjct: 181 LVFVNANSLYRRIP 192

[Close]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Match: I1KN30_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_07G251300 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.500e-44
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR LL AAS+ AVVV+VT+NQTE +  P+ P+  PAKF +SPAF+YFV ALS+TG+Y
Sbjct: 30  DVILRFLLFAASLVAVVVIVTANQTEVIRVPQ-PVPWPAKFRYSPAFVYFVAALSVTGLY 89

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTH-VRW 148
           SIIT++ASL +  K  +  KL    +L D LILGI+ASATG AGGV Y+GLKGN H V W
Sbjct: 90  SIITTLASLFASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGNRHVVGW 149

Query: 149 MKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
            KIC++Y KFCRH+GASI V+LF +VV VLL+ L  YS++ R+P
Sbjct: 150 NKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRVP 192

[Close]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Match: A0A0B2P5N3_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_009869 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.500e-44
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR LL AAS+ AVVV+VT+NQTE +  P+ P+  PAKF +SPAF+YFV ALS+TG+Y
Sbjct: 30  DVILRFLLFAASLVAVVVIVTANQTEVIRVPQ-PVPWPAKFRYSPAFVYFVAALSVTGLY 89

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTH-VRW 148
           SIIT++ASL +  K  +  KL    +L D LILGI+ASATG AGGV Y+GLKGN H V W
Sbjct: 90  SIITTLASLFASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGNRHVVGW 149

Query: 149 MKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
            KIC++Y KFCRH+GASI V+LF +VV VLL+ L  YS++ R+P
Sbjct: 150 NKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRVP 192

[Close]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Match: A0A0S3R9I1_PHAAN (CASP-like protein OS=Vigna angularis var. angularis GN=Vigan.01G526800 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.200e-44
Identity = 95/163 (58.28%), Postives = 124/163 (76.07%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR LL AAS+ +VVV+VT N+T+ +P PR     PAKF +SPAF+YFV ALS+ G+Y
Sbjct: 31  DVILRFLLFAASLVSVVVIVTGNETKYLPRPR-----PAKFRYSPAFVYFVAALSVAGLY 90

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTHVRWM 148
           SIIT++ASL +++   + AKL    +L D LILGI+ASA G AGGV Y+GLKGN HV W 
Sbjct: 91  SIITTLASLYAIKNPALKAKLLLYFILWDALILGIIASAIGTAGGVAYVGLKGNKHVNWD 150

Query: 149 KICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
           KICN+Y KFCRH+GAS+ V+LF ++V VLL+ +  YSL+ R+P
Sbjct: 151 KICNVYDKFCRHVGASVAVALFGSIVTVLLIWISAYSLHSRVP 188

[Close]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Match: CSPL1_BETVM (CASP-like protein Ni6 OS=Beta vulgaris subsp. maritima GN=Ni6 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.800e-62
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVV---APPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVP 60
           MSSME+EKG V    APP A   N  +   VDVILRVLLLAASIA+VV+MVTS QTE + 
Sbjct: 1   MSSMETEKGAVPTPQAPPVAPTDNKYRV--VDVILRVLLLAASIASVVLMVTSKQTEIIV 60

Query: 61  TPRGPMRAPAKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHD 120
           +P G     AKF +SPAFIY V ALS+ G+YSIIT++ SLS MRK  VP KLFWILL+HD
Sbjct: 61  SPFGSRPNAAKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHD 120

Query: 121 VLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVL 180
           VL+LGIVA+ATG AGGVGYIGLKGNTHVRW KI N+Y KFCRH+GASI+VSLFAA VLVL
Sbjct: 121 VLLLGIVAAATGTAGGVGYIGLKGNTHVRWGKIRNVYDKFCRHVGASIIVSLFAAAVLVL 180

Query: 181 LVVLDGYSLYRRIP 192
           LV ++  SLYRRIP
Sbjct: 181 LVFVNANSLYRRIP 192

[Close]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Match: CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.900e-46
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR LL AAS+ AVVV+VT+NQTE +  P+ P+  PAKF +SPAF+YFV ALS+TG+Y
Sbjct: 30  DVILRFLLFAASLVAVVVIVTANQTEVIRVPQ-PVPWPAKFRYSPAFVYFVAALSVTGLY 89

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTH-VRW 148
           SIIT++ASL +  K  +  KL    +L D LILGI+ASATG AGGV Y+GLKGN H V W
Sbjct: 90  SIITTLASLLASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGNRHVVGW 149

Query: 149 MKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
            KIC++Y KFCRH+GASI V+LF +VV VLL+ L  YS++ R+P
Sbjct: 150 NKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRVP 192

[Close]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Match: CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.500e-45
Identity = 97/164 (59.15%), Postives = 126/164 (76.83%), Query Frame = 1

		  
Query: 29  DVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAPAKFHHSPAFIYFVVALSITGVY 88
           DVILR +L AAS+ AVVV+VT NQTE +  P+ P+  PAKF ++PAF+YFV ALS+TG+Y
Sbjct: 30  DVILRFVLFAASLVAVVVIVTGNQTEVILVPQ-PVPWPAKFRYTPAFVYFVAALSVTGLY 89

Query: 89  SIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTH-VRW 148
           SIIT++ASL +  K  +  KL    +L D LILGI+ASATG AGGV Y+GLKGN+H V W
Sbjct: 90  SIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATGTAGGVAYLGLKGNSHVVGW 149

Query: 149 MKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRIP 192
            KIC++Y KFCRH+GASI V+LF ++V VLL+ L  YS++ R+P
Sbjct: 150 NKICHVYDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIHSRVP 192

[Close]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Match: CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 9.300e-45
Identity = 103/191 (53.93%), Postives = 137/191 (71.73%), Query Frame = 1

		  
Query: 3   SMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPRGP 62
           S++SE+    AP A    +N     V V LR LL AAS+ AVVVMVT+ QT+ VP P  P
Sbjct: 11  SIKSEE----APAAHPRRSNYS--SVHVALRFLLFAASVTAVVVMVTAKQTKIVPVPGLP 70

Query: 63  MRAP--AKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 122
           +  P  AKF  SPAF+YF+ ALS+ G+Y I+T++A++S + K     +      L DVL+
Sbjct: 71  ISVPLEAKFSDSPAFLYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALLDVLM 130

Query: 123 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 182
           LGIVASATGAAGGV Y+GLKGN+HVRW K+CN+Y KFC+H+G+SI V+LFA+V+LVLL +
Sbjct: 131 LGIVASATGAAGGVAYVGLKGNSHVRWGKVCNVYDKFCQHVGSSIAVALFASVLLVLLTM 190

Query: 183 LDGYSLYRRIP 192
           L  +S+YR+IP
Sbjct: 191 LSVFSIYRKIP 195

[Close]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Match: CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.500e-42
Identity = 96/166 (57.83%), Postives = 122/166 (73.49%), Query Frame = 1

		  
Query: 28  VDVILRVLLLAASIAAVVVMVTSNQTETVPTPRGP-MRAP--AKFHHSPAFIYFVVALSI 87
           VDV LRV L A ++ A+VVM T+ QTE  P P  P +R P  AKF+HSPAFIYFV ALS+
Sbjct: 32  VDVGLRVFLFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIYFVAALSV 91

Query: 88  TGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTH 147
             +YSIIT++ASL  + K     K  +   L DVL+LGIVA+ATGAAGGV YIGLKGN+H
Sbjct: 92  ACLYSIITTLASLGVIAKPIYATKFLFYYALWDVLMLGIVAAATGAAGGVAYIGLKGNSH 151

Query: 148 VRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYSLYRRI 191
            RW KICN+Y  FC+H+G+++ +SL A+VVLVLL++L   SLY R+
Sbjct: 152 TRWTKICNVYDTFCKHVGSALAISLAASVVLVLLIMLSVCSLYSRV 197

[Close]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 165.2 bits (417), Expect = 3.900e-41
Identity = 93/190 (48.95%), Postives = 132/190 (69.47%), Query Frame = 1

		  
Query: 2   SSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPRG 61
           S++++E+ T  AP        K C    V+LR +L AA++ ++VVMVTS QT+ +  P  
Sbjct: 7   STLDTERST--APGTGTT--TKSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT 66

Query: 62  PMRAPA-KFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLI 121
           P+R PA +F +SPA IYFVVALS+   YSI+++  ++S+ +K    A L   L + D ++
Sbjct: 67  PIRIPAAEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVM 126

Query: 122 LGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVV 181
           +GIVASATGA GGV Y+GLKGN  VRW KIC++Y KFCRH+G +I VSLFA+VVL+LL +
Sbjct: 127 VGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSI 186

Query: 182 LDGYSLYRRI 191
           +   SLY++I
Sbjct: 187 ISVLSLYKKI 192

[Close]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 145.2 bits (365), Expect = 4.200e-35
Identity = 81/174 (46.55%), Postives = 117/174 (67.24%), Query Frame = 1

		  
Query: 14  PPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPRGPMRAP--AKFHH 73
           PP +   +   C  +D+I RVLL +A++ A++VMVTS+QTE    P     AP  A+F+ 
Sbjct: 23  PPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFND 82

Query: 74  SPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAA 133
           SPAFIYFVVAL +   Y++I+++ S+S + K +  A+    L   D+++LGI+ASATG A
Sbjct: 83  SPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTA 142

Query: 134 GGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVVLVLLVVLDGYS 186
           GGV YI LKGN  V W KICN+Y KFCR+I  S+ +SLFA+++L++L +    S
Sbjct: 143 GGVAYIALKGNEEVGWNKICNVYDKFCRYIATSLALSLFASLLLLVLSIWSALS 196

[Close]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 100.1 bits (248), Expect = 1.500e-21
Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60
           +  ME EKG        E+G+ K   G+++ +RVL L  ++ A  V+  + QT+ VP   
Sbjct: 9   VDGMEMEKGK------KESGSRK---GLELTMRVLALVLTMVAATVLGVAKQTKVVPIKL 68

Query: 61  GPMRAP------AKFHHSPAFIYFVVALSITGVYSIITSIASLSSMRKSKVPAKLFWILL 120
            P   P      AK  +  AF+Y + A +I   Y+ I+ +  + S  K K    L   +L
Sbjct: 69  IPTLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMIS--KGKRSKSLLMAVL 128

Query: 121 LHDVLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAVV 180
           + D++++ ++ S+TGAAG +G +G  GN HV W K+C ++GKFC     S+ ++L A+VV
Sbjct: 129 IGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVV 188

Query: 181 LVLLVVLDGYSL 187
            +LLVVLD   L
Sbjct: 189 FMLLVVLDALKL 189

[Close]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 99.8 bits (247), Expect = 2.000e-21
Identity = 72/193 (37.31%), Postives = 108/193 (55.96%), Query Frame = 1

		  
Query: 1   MSSMESEKGTVVAPPAAENGNNKKCGGVDVILRVLLLAASIAAVVVMVTSNQTETVPTPR 60
           M+ ME EKG        E G+ K   GV++ +RVL L  ++AA  V+  + QT+ V    
Sbjct: 9   MNGMEMEKGK------RELGSRK---GVELTMRVLALILTMAAATVLGVAKQTKVVSIKL 68

Query: 61  GPMRAP------AKFHHSPAFIYFVVALSITGVYSIIT-SIASLSSMRKSKVPAKLFWIL 120
            P   P      AK  +  AF+Y +   +I   Y+ I+ +I  +S  R+SK   KL  ++
Sbjct: 69  IPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAILMISRGRRSK---KLLMVV 128

Query: 121 LLHDVLILGIVASATGAAGGVGYIGLKGNTHVRWMKICNLYGKFCRHIGASILVSLFAAV 180
           LL D++++ ++ S TGAA  +G +GL GN HV W K+C ++GKFC     S+ ++L AAV
Sbjct: 129 LLGDLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAV 188

Query: 181 VLVLLVVLDGYSL 187
           V + LVVLD   L
Sbjct: 189 VFMFLVVLDAIKL 189

[Close]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 78.6 bits (192), Expect = 4.800e-15
Identity = 50/153 (32.68%), Postives = 89/153 (58.17%), Query Frame = 1

		  
Query: 32  LRVLLLAASIAAVVVMVTSNQTETVPTPR---GPMRAP--AKFHHSPAFIYFVVALSITG 91
           LR+    A++AA +VM  + +T+T+        P++A   AKF H+PAF++FV+A  +  
Sbjct: 22  LRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVS 81

Query: 92  VYSIITSIASLSSMRKSKVPAKLFWILLLHDVLILGIVASATGAAGGVGYIGLKGNTHVR 151
            ++++  +  + S +      +L  I +L D+L   +V++A  AA  V  +G  GN H +
Sbjct: 82  FHNLLMIVVQIFSRKLEYKGLRLLSIAIL-DMLNATLVSAAANAAVFVAELGKNGNKHAK 141

Query: 152 WMKICNLYGKFCRHIGASILVSLFAAVVLVLLV 180
           W K+C+ +  +C H GA  +++ FA V+L+LLV
Sbjct: 142 WNKVCDRFTTYCDH-GAGAIIAAFAGVILMLLV 172

The following BLAST results are available for this feature:

BLAST of Spo18520.1 vs. NCBI nr
BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
BLAST of Spo18520.1 vs. TAIR (Arabidopsis)

BLAST of Spo18520.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902237502\|gb\|KNA24831.1\|	5.6e-98	100.	hypothetical protein SOVF_0121...	[more]
gi\|731372590\|ref\|XP_010666392.1\|	2.7e-60	69.5	PREDICTED: CASP-like protein N...	[more]
gi\|341958524\|sp\|D2KQI6.1\|CSPL1_BETVM	6.0e-60	69.5	RecName: Full=CASP-like protei...	[more]
gi\|747086676\|ref\|XP_011090848.1\|	1.1e-45	58.1	PREDICTED: CASP-like protein 1...	[more]
gi\|951003712\|ref\|XP_014507677.1\|	9.3e-45	58.9	PREDICTED: CASP-like protein 1...	[more]

BLAST of Spo18520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RZ96_SPIOL	3.9e-98	100.	CASP-like protein OS=Spinacia ...	[more]
A0A0J8B588_BETVU	1.9e-60	69.5	CASP-like protein OS=Beta vulg...	[more]
I1KN30_SOYBN	5.5e-44	60.9	CASP-like protein OS=Glycine m...	[more]
A0A0B2P5N3_GLYSO	5.5e-44	60.9	CASP-like protein OS=Glycine s...	[more]
A0A0S3R9I1_PHAAN	7.2e-44	58.2	CASP-like protein OS=Vigna ang...	[more]

BLAST of Spo18520.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
CSPL1_BETVM	3.8e-62	69.5	CASP-like protein Ni6 OS=Beta ...	[more]
CSPL7_SOYBN	4.9e-46	60.9	CASP-like protein 1D2 OS=Glyci...	[more]
CSPL8_SOYBN	5.5e-45	59.1	CASP-like protein 1D1 OS=Glyci...	[more]
CSPLD_POPTR	9.3e-45	53.9	CASP-like protein 1D1 OS=Popul...	[more]
CSPL5_RICCO	2.5e-42	57.8	CASP-like protein 1D1 OS=Ricin...	[more]

BLAST of Spo18520.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G15610.1	3.9e-41	48.9	Uncharacterised protein family...	[more]
AT3G06390.1	4.2e-35	46.5	Uncharacterised protein family...	[more]
AT4G15630.1	1.5e-21	34.9	Uncharacterised protein family...	[more]
AT4G15620.1	2.0e-21	37.3	Uncharacterised protein family...	[more]
AT4G20390.1	4.8e-15	32.6	Uncharacterised protein family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 30..183 score: 3.6
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 23..174 score: 9.4
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 7..190 score: 3.8
None	No IPR available	PANTHER	PTHR11615:SF113	SUBFAMILY NOT NAMED	coord: 7..190 score: 3.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21248	0.67	Barchart \| Table
Spo15589	0.65	Barchart \| Table
Spo24296	0.65	Barchart \| Table