Spo18549 (gene)

Overview
NameSpo18549
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTranslocation protein SEC63-like protein
Locationchr5 : 67863488 .. 67867251 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACTGCTACTCAAATCGTTGTTCCGTCGTCAATATTACTTGCAGAAATCTACTATTTTTTAAACCTAAATCCAAGGAGATTGTTGTATGTTGAAATTATTCACTCCAGGTAATTTTTAATTTATTTTACTGCAAATTTAAGGATTTATCTTCAATTTTTCTAGGATCGGCACCCTTTGAGATTAATTTGATTCCCTTTTGTTTGGTTCCTGGTGAATTTTATAGATCTGGTGTTGTGTTTTTGATTTTTTTCTTTTATTTTTTTCAAAAAAATTGGTTTTTTCTCTTCAATTTATCGAATATTCGGAAATTAGGGTTATTGATTTTGTTTTTTATTTTGGTTTGATTCACGATGATGAGGAGGGACCATGGAAAATCCGTAGATTACTTATTATGAAGGCAAACCTGATATTACAGATGCTCCAAAGACCAAGTTCAGGTTTGTTGGGTTTTTAATATTTATTTTTTTGCCATTTTTTCAAGCTAATAGCTACTGACAATGCTGATTTTCCTTAAGAATTTTACTTTGTACTTACATTAAATAAATGATTTGCAATTGCAATTGTTGCATAAAATGGTGGGTGTTTGGGGGGCAATGTTGAATCTGCCTATTTCTTGCTCTATTGATGTGTAAGCTTACGAGTCGGTTTTTGGTTTTAATCTGTTCTACCGGATCGTAATGATTGAACTAGTGGGTCCTGATGTTTCTGGACTATAGCATCGGGCAACTTTGTTAGTCGGGAGATGCATTTCAATTGAATTCATAGACATTGAAAACATTGTAGTTTATTGTTTTTGCCGTTGCTAAGAAGGGTCAGGGGTTAGTAATTCTAGCTTGTTGAACTTTCTCTGTTGTATTCGTTACTTCATAACTATCTTTAACACTTGAACATACTTGTTCAGGTGATACATTTTTCACTAGACTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGGTATAATAATAGGTGCCTTGATTTTCTTTTTCTTATATGTTTGATTGGGTATTTTACTACAAGTATTATTTATTTCAGTATCCTAGATTTTCTCAAAGATAAAAATATATGGCTTTAGAGAATGTTTAAAGTCCACACACTATTACACTACTACAAAAGATGTTATATCTCGACGATGTTGAAGACCGTCAGCATGGAATATGACATTGCAGAAATGTGATCTATTGGTGCCCTGTTTGGCTGTTTGTGTTAATTTTGGTAGCTGCTTGTTTTAGGCCTTGTTATCATGAACTGTCTAGGTTGAGTATTCTGACTACTTAATTGGATTTCTGTCTCTTTCTTTGCACCATTTTGGTAGTAGATTTTTCCTGTTGATATATATATTTTTTGTTAGTAGGTTGAGTAAACATGATATTGCTTGGGCTTATTGATTTGATCGTAGGAAAAATAACTATTTTATATTTTAGTATATTTGGATGGTTGGTCACTATAGGTCGATTAAATATCGTTAATTTTTATACTCTCATTTACATTTTCTACCATGTGCCTACAAATCACATATATTTCCTGGTAGACACAATTGTTAATGAAATAACTTACATATCAAATTTCTTTTATGGTAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTAATATAAACTTTCCAATGTTCTAGCACTTAAACAAATGAAATTATGACTGCATGCCATGAACCATTGACATTCTGAAACCCGAGGATTTGAGTATTAACAGCCTACATTCTTCTGAACCGTTGATGATGTTGAATTATTGATGAGTGCTTTTTTATTTTTTATGGCCTATCATTCTTTGAAAGAATTCCAATATATGCTGATGATAACCTTTAACTTTGGAATAATTTAGCAGTTTCTGTATTTTTCTCTCTTTTTTTTATTCAAAGTTATTTCAAGTTTCTCAGGGGTAACTATGTGACATAGCTTTATTTATCATGGAAACAAAGTGACTTGTACGGCAAAACTTGGAGTTGTTTTATAGCATTGCTGCCATCCTGATATTTAAACCCTTGTGGAAACTAAACTTCTTTGGAGGAATATTGATTAATGAGCCCACTTTGTTCTAAATATTTAATAGTTCAGAAAAGTCATCTTTTTCTTTCATTATCTCTATTTTGGTTTAACATAGAATTGTCTTTCTAGAAATGGTACAAAGCTACCAAAATCAATATGAAATAAACCCCTTTTGGAAAGGGGCGCGCAGCACTCCAGAGGTTGGATTTTTCTAAGTTAAAACTAAAATCAGGATTGTTAAAAGAGGATGAAAGTTGGGATTCAAAGTAGCCTTATTTATGCAAGTGCTCAATTAAGGTAGTGATTACAAAGTCTGTAAGTCCTTAATCTAGTGCGAACTCAATAATAATCAAGTTGCGCAGGGCATGAAGTTTACAAACTTTTTTCCTTACTAATTTTGGAAGTGGACTAAGTTTTTAGGATGGAAGGAGTAGTAGATAGATCATACATGTTCTACTAAGTTGCCTCTTTACAGATTAAACTCATGTCTGTCATCAAATGCTGGTTCATATGTCAACTTTACAATCCTGGCATATTTCATGATTGTTATGCCAGTCTCATTTAGTCCTTCTTTTAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTTAGTCTTCCACATCTAACTTGTCATAGTTCTAATCTTGCATGAGTGATAGTTTCCGTAAAGGTAGTGCTATACGTGGTAATTTGATTGAGCGAACAGTCCGATCTATTGATTGCTCCTAGATTTTGGTCTTTGTCATGATCATGTTTGATTCTGAGCTAGGCCTTTGTTGGTTGTATAGTTGGTTTTAGAATACTCAGATGCAGATAGACAAAATTCAGGAGTTGATATCTGCAGGATCGACACTCCTTCATGTTACATTCTCATTATCCAATTTCAAAGAATGTGTAGAATGAATACTGAATCAAGTGGTGATGCATAGCTCCTTCAACTATGAAGCTGATATTTTTGAACTTTGTATTGAGTGGCCTTTGTTTTGAAGATGACATTTTAGAATAATAAGTTGGATGACATTTTTTCTGCTGCTTGGTTGTTGTTTTGGTTGCGTGTTTCTGTCTTCTGCAGGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAACTTTTTCTGTTGTTTCGTTGTTTAGATACTTTTGTTCATACCTTTTGGTATTAAATTTGTATTTTGGAGATATATAGTTAGCTAATTTAATAGTTTTGACATGTGTAAACTTAATTTGATGATATGATATGACAATTTGGAGCGAGCTAATACGTATTATTACATATATATATATAG

mRNA sequence

ATGGAAGACTGCTACTCAAATCGTTGTTCCGTCGTCAATATTACTTGCAGAAATCTACTATTTTTTAAACCTAAATCCAAGGAGATTGTTGTATGATCGGCACCCTTTGAGATTAATTTGATTCCCTTTTGTTTGGTTCCTGGTGAATTTTATAGATCTGGTGTTGTATGCTCCAAAGACCAAGTTCAGGTGATACATTTTTCACTAGACTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAACTTTTTCTGTTGTTTCGTTGTTTAGATACTTTTGTTCATACCTTTTGGTATTAAATTTGTATTTTGGAGATATATAGTTAGCTAATTTAATAGTTTTGACATGTGTAAACTTAATTTGATGATATGATATGACAATTTGGAGCGAGCTAATACGTATTATTACATATATATATATAG

Coding sequence (CDS)

ATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAA

Protein sequence

MVLSVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIFHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFLDILDFLMLFQCHVIVVCLVLFSAAQVLLLAVCRVWVVLLMCAGCSAGSPGLQGVWCSIAAVCNLMLRTLLLRLVVREWSVLL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18549.1Spo18549.1mRNA


Homology
[Close]
BLAST of Spo18549.1 vs. NCBI nr
Match: gi|902165156|gb|KNA07070.1| (hypothetical protein SOVF_175330 [Spinacia oleracea])

HSP 1 Score: 125.6 bits (314), Expect = 9.300e-26
Identity = 69/96 (71.88%), Postives = 73/96 (76.04%), Query Frame = 1 

		  

Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETADLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373
[Close]
BLAST of Spo18549.1 vs. NCBI nr
Match: gi|731321905|ref|XP_010671598.1| (PREDICTED: dnaJ protein ERDJ2A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 123.6 bits (309), Expect = 3.500e-25
Identity = 68/96 (70.83%), Postives = 72/96 (75.00%), Query Frame = 1 

		  

Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRET DLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373
[Close]
BLAST of Spo18549.1 vs. NCBI nr
Match: gi|118481069|gb|ABK92488.1| (unknown [Populus trichocarpa])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. NCBI nr
Match: gi|743877355|ref|XP_011035368.1| (PREDICTED: dnaJ protein ERDJ2A-like [Populus euphratica])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. NCBI nr
Match: gi|566165358|ref|XP_002305942.2| (DNAJ heat shock N-terminal domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175330 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.500e-26
Identity = 69/96 (71.88%), Postives = 73/96 (76.04%), Query Frame = 1 

		  

Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETADLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373
[Close]
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053200 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.500e-25
Identity = 68/96 (70.83%), Postives = 72/96 (75.00%), Query Frame = 1 

		  

Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRET DLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373
[Close]
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: G5DWP6_SILLA (Translocation protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.500e-25
Identity = 67/96 (69.79%), Postives = 72/96 (75.00%), Query Frame = 1 

		  

Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETA LPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETAGLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQC+IQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A9P7Y5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.300e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: B9H3M8_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07070g PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.300e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373
[Close]
BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Match: DNJ21_ARATH (DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.100e-22
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+  L P L GD +RVLELAPRLLEEL+K                
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRTAQGHGWLRPA+GVVELSQC++QA+
Sbjct: 359 ------MAVIPRTAQGHGWLRPAVGVVELSQCIVQAV 373
[Close]
BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Match: DNJ29_ARATH (DnaJ protein ERDJ2B OS=Arabidopsis thaliana GN=ERDJ2B PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.900e-16
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           + I+T+LLIQ  LTRE++ L PTL  D + VLE APRLLE+L+K                
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFL-------DILDFLML 112
                 MA+IPR  QG GWLRPA+GV+ELSQC++QA+          DI  FL L
Sbjct: 359 ------MAVIPRNEQGRGWLRPALGVMELSQCIVQAVPLSARKSSSEDIAPFLQL 391
[Close]
BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Match: AT1G79940.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.600e-23
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+  L P L GD +RVLELAPRLLEEL+K                
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRTAQGHGWLRPA+GVVELSQC++QA+
Sbjct: 359 ------MAVIPRTAQGHGWLRPAVGVVELSQCIVQAV 373
[Close]
BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Match: AT4G21180.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.200e-17
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1 

		  

Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           + I+T+LLIQ  LTRE++ L PTL  D + VLE APRLLE+L+K                
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFL-------DILDFLML 112
                 MA+IPR  QG GWLRPA+GV+ELSQC++QA+          DI  FL L
Sbjct: 359 ------MAVIPRNEQGRGWLRPALGVMELSQCIVQAVPLSARKSSSEDIAPFLQL 391
The following BLAST results are available for this feature:
BLAST of Spo18549.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902165156|gb|KNA07070.1|9.3e-2671.8hypothetical protein SOVF_1753... [more]
gi|731321905|ref|XP_010671598.1|3.5e-2570.8PREDICTED: dnaJ protein ERDJ2A... [more]
gi|118481069|gb|ABK92488.1|1.8e-2160.8unknown [Populus trichocarpa][more]
gi|743877355|ref|XP_011035368.1|1.8e-2160.8PREDICTED: dnaJ protein ERDJ2A... [more]
gi|566165358|ref|XP_002305942.2|1.8e-2160.8DNAJ heat shock N-terminal dom... [more]
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BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QIJ4_SPIOL6.5e-2671.8Uncharacterized protein OS=Spi... [more]
A0A0J8CVP5_BETVU2.5e-2570.8Uncharacterized protein OS=Bet... [more]
G5DWP6_SILLA5.5e-2569.7Translocation protein (Fragmen... [more]
A9P7Y5_POPTR1.3e-2160.8Putative uncharacterized prote... [more]
B9H3M8_POPTR1.3e-2160.8DNAJ heat shock N-terminal dom... [more]
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BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DNJ21_ARATH8.1e-2256.7DnaJ protein ERDJ2A OS=Arabido... [more]
DNJ29_ARATH3.9e-1646.0DnaJ protein ERDJ2B OS=Arabido... [more]
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BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G79940.14.6e-2356.7DnaJ / Sec63 Brl domains-conta... [more]
AT4G21180.12.2e-1746.0DnaJ / Sec63 Brl domains-conta... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3380.10coord: 7..101
score: 9.8
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 4..47
score: 2.9E-14coord: 70..101
score: 2.9
NoneNo IPR availablePANTHERPTHR24075:SF0TRANSLOCATION PROTEIN SEC63 HOMOLOGcoord: 4..47
score: 2.9E-14coord: 70..101
score: 2.9
NoneNo IPR availableunknownSSF158702Sec63 N-terminal domain-likecoord: 79..105
score: 2.88E-9coord: 7..50
score: 2.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0006457 protein folding
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0051604 protein maturation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0050826 response to freezing
biological_process GO:0009909 regulation of flower development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0000338 protein deneddylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009933 meristem structural organization
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0019915 lipid storage
biological_process GO:0000741 karyogamy
biological_process GO:0001510 RNA methylation
biological_process GO:0005982 starch metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0006420 arginyl-tRNA aminoacylation
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006812 cation transport
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0006412 translation
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0031204 posttranslational protein targeting to membrane, translocation
biological_process GO:0006508 proteolysis
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006281 DNA repair
biological_process GO:0051301 cell division
biological_process GO:0016571 histone methylation
biological_process GO:0045694 regulation of embryo sac egg cell differentiation
biological_process GO:0006312 mitotic recombination
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009630 gravitropism
biological_process GO:0006427 histidyl-tRNA aminoacylation
biological_process GO:0033036 macromolecule localization
biological_process GO:0006547 histidine metabolic process
biological_process GO:0071702 organic substance transport
biological_process GO:0031047 gene silencing by RNA
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0044464 cell part
cellular_component GO:0005840 ribosome
cellular_component GO:0016020 membrane
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005634 nucleus
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004821 histidine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0043167 ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008897 holo-[acyl-carrier-protein] synthase activity
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005488 binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0004814 arginine-tRNA ligase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo125550.72Barchart | Table
Spo133180.72Barchart | Table
Spo258790.71Barchart | Table
Spo106610.71Barchart | Table
Spo262140.71Barchart | Table
Spo238890.70Barchart | Table
Spo030020.70Barchart | Table
Spo132380.70Barchart | Table
Spo178890.70Barchart | Table
Spo173860.69Barchart | Table
Spo175470.69Barchart | Table
Spo150670.69Barchart | Table
Spo018410.69Barchart | Table
Spo092140.69Barchart | Table
Spo172350.69Barchart | Table
Spo246980.68Barchart | Table
Spo162180.68Barchart | Table
Spo022540.68Barchart | Table
Spo110690.68Barchart | Table
Spo228940.67Barchart | Table
Spo067890.67Barchart | Table
Spo236680.67Barchart | Table
Spo024830.67Barchart | Table
Spo197030.67Barchart | Table
Spo107930.67Barchart | Table
Spo163140.67Barchart | Table
Spo066680.67Barchart | Table
Spo049850.67Barchart | Table
Spo164210.67Barchart | Table
Spo028550.67Barchart | Table
Spo233550.67Barchart | Table
Spo070790.67Barchart | Table
Spo186030.67Barchart | Table
Spo172200.66Barchart | Table
Spo003910.66Barchart | Table
Spo006940.66Barchart | Table
Spo013130.66Barchart | Table
Spo018010.66Barchart | Table
Spo080730.66Barchart | Table
Spo088070.66Barchart | Table
Spo100210.66Barchart | Table
Spo147810.66Barchart | Table
Spo158650.66Barchart | Table
Spo163740.66Barchart | Table
Spo166800.66Barchart | Table
Spo167590.66Barchart | Table
Spo001370.66Barchart | Table
Spo182830.66Barchart | Table
Spo209000.66Barchart | Table
Spo212910.66Barchart | Table
Spo240080.66Barchart | Table
Spo248410.66Barchart | Table
Spo255050.66Barchart | Table
Spo268330.66Barchart | Table
Spo095620.65Barchart | Table
Spo083550.65Barchart | Table
Spo047030.65Barchart | Table
Spo078820.65Barchart | Table
Spo177550.65Barchart | Table
Spo038510.65Barchart | Table
Spo266930.65Barchart | Table
Spo163550.65Barchart | Table
Spo149950.65Barchart | Table
Spo236110.65Barchart | Table