Spo18568 (gene)

Overview
NameSpo18568
Typegene
OrganismSpinacia oleracea (Spinach)
Description(Late embryogenesis abundant hydroxyproline-rich glycoprotein) (Non-race specific disease resistance protein-like)
Locationchr4 : 75128517 .. 75129149 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTCGAGGAAGGCGGCTGCTGCAGGTGCTGCTTCAGTTTCATATTCACCTCAGGCTTAACTGCACTTTTCCTGTGGCTAAATCTCAAGACCACAAACCCAACTTGCTCCATTGAAAACTTTGACGTTTTTACCCTCAACAAAACAGCTAATACTACCTTCAGGAACAACCACACTATTCGCTATGATCTGAAGCTAAACAACAAGGAGAATAAAGATAAGGGTATTTACTATGATACCCTTAATCTTACTTTTTATTACAAGCCTAACCTTAGCTTTGTAACACTTGGAAATGCCACTTTTAACCCTTTTTATCAGGGGCATGGGAAGAACACTCACCGTATTAGTGTCATTGATGCTAGAGGGGTAAAATGGGAAAATGCTACCGCGACAATGGCCGAGTTTAGGGTGGAGATGAACACGTCGGTTCGGTTTAAGATCATATTTTGGAAGACTAAACGGCATCGTTTGGATTTGCACGCTGACTTGCTAGTCAATGAACAAGGGATTTTGGTTAAGAAGAAGAAGAAGAAAGGGATTAAGTTCAAATCGGGGGTTTGGAATAGTAAGGTGTGCAACTTTTATTTGTTGGGCATTTTGGGTATTTTCACTTATATTCTTTTGTGGTAG

mRNA sequence

ATGGGGGTCGAGGAAGGCGGCTGCTGCAGGTGCTGCTTCAGTTTCATATTCACCTCAGGCTTAACTGCACTTTTCCTGTGGCTAAATCTCAAGACCACAAACCCAACTTGCTCCATTGAAAACTTTGACGTTTTTACCCTCAACAAAACAGCTAATACTACCTTCAGGAACAACCACACTATTCGCTATGATCTGAAGCTAAACAACAAGGAGAATAAAGATAAGGGTATTTACTATGATACCCTTAATCTTACTTTTTATTACAAGCCTAACCTTAGCTTTGTAACACTTGGAAATGCCACTTTTAACCCTTTTTATCAGGGGCATGGGAAGAACACTCACCGTATTAGTGTCATTGATGCTAGAGGGGTAAAATGGGAAAATGCTACCGCGACAATGGCCGAGTTTAGGGTGGAGATGAACACGTCGGTTCGGTTTAAGATCATATTTTGGAAGACTAAACGGCATCGTTTGGATTTGCACGCTGACTTGCTAGTCAATGAACAAGGGATTTTGGTTAAGAAGAAGAAGAAGAAAGGGATTAAGTTCAAATCGGGGGTTTGGAATAGTAAGGTGTGCAACTTTTATTTGTTGGGCATTTTGGGTATTTTCACTTATATTCTTTTGTGGTAG

Coding sequence (CDS)

ATGGGGGTCGAGGAAGGCGGCTGCTGCAGGTGCTGCTTCAGTTTCATATTCACCTCAGGCTTAACTGCACTTTTCCTGTGGCTAAATCTCAAGACCACAAACCCAACTTGCTCCATTGAAAACTTTGACGTTTTTACCCTCAACAAAACAGCTAATACTACCTTCAGGAACAACCACACTATTCGCTATGATCTGAAGCTAAACAACAAGGAGAATAAAGATAAGGGTATTTACTATGATACCCTTAATCTTACTTTTTATTACAAGCCTAACCTTAGCTTTGTAACACTTGGAAATGCCACTTTTAACCCTTTTTATCAGGGGCATGGGAAGAACACTCACCGTATTAGTGTCATTGATGCTAGAGGGGTAAAATGGGAAAATGCTACCGCGACAATGGCCGAGTTTAGGGTGGAGATGAACACGTCGGTTCGGTTTAAGATCATATTTTGGAAGACTAAACGGCATCGTTTGGATTTGCACGCTGACTTGCTAGTCAATGAACAAGGGATTTTGGTTAAGAAGAAGAAGAAGAAAGGGATTAAGTTCAAATCGGGGGTTTGGAATAGTAAGGTGTGCAACTTTTATTTGTTGGGCATTTTGGGTATTTTCACTTATATTCTTTTGTGGTAG

Protein sequence

MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIKFKSGVWNSKVCNFYLLGILGIFTYILLW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18568.1Spo18568.1mRNA


Homology
[Close]
BLAST of Spo18568.1 vs. NCBI nr
Match: gi|902210276|gb|KNA16378.1| (hypothetical protein SOVF_089620 [Spinacia oleracea])

HSP 1 Score: 433.7 bits (1114), Expect = 1.800e-118
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 

		  

Query: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60
           MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT
Sbjct: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60

Query: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID 120
           IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID
Sbjct: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID 120

Query: 121 ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG 180
           ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG
Sbjct: 121 ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG 180

Query: 181 IKFKSGVWNSKVCNFYLLGILGIFTYILLW 211
           IKFKSGVWNSKVCNFYLLGILGIFTYILLW
Sbjct: 181 IKFKSGVWNSKVCNFYLLGILGIFTYILLW 210
[Close]
BLAST of Spo18568.1 vs. NCBI nr
Match: gi|731364924|ref|XP_010694242.1| (PREDICTED: protein NDR1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 331.3 bits (848), Expect = 1.300e-87
Identity = 163/212 (76.89%), Postives = 181/212 (85.38%), Query Frame = 1 

		  

Query: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60
           M  EE  CCRCC SFIFTSGLTALFLWL+L+ +NPTCSIENFDVF LNKTAN+TF+NNHT
Sbjct: 1   MAEEESSCCRCCISFIFTSGLTALFLWLSLRPSNPTCSIENFDVFILNKTANSTFKNNHT 60

Query: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFV-TLGNATFNPFYQGHGKNTHRISVI 120
           I YDLKLNNK NKDKGIYYDTLNLTFYYKPNL+ + TLGNAT+ PFYQG+GKNTHR   I
Sbjct: 61  ILYDLKLNNKGNKDKGIYYDTLNLTFYYKPNLTLINTLGNATYVPFYQGYGKNTHRKGSI 120

Query: 121 DARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKK 180
           DARGVKWENATAT A FRVE+NT VRFKI+FWKTKRHRLDL ADLLVNEQG L+K+KKKK
Sbjct: 121 DARGVKWENATATTAVFRVELNTLVRFKIVFWKTKRHRLDLKADLLVNEQGSLIKRKKKK 180

Query: 181 GIKFKSGVWNSKVCN-FYLLGILGIFTYILLW 211
           GIK  SGV NS  C+ F LLG+LG+  ++  W
Sbjct: 181 GIKLTSGVGNSMSCSKFMLLGVLGVLIFVHFW 212
[Close]
BLAST of Spo18568.1 vs. NCBI nr
Match: gi|731364926|ref|XP_010694244.1| (PREDICTED: protein NDR1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 192.6 bits (488), Expect = 7.000e-46
Identity = 116/208 (55.77%), Postives = 136/208 (65.38%), Query Frame = 1 

		  

Query: 3   VEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIR 62
           V++  CC C FS     GL AL LWL L    PTCSIE FDVF L +       NN TI 
Sbjct: 7   VKQRSCCGCIFSL----GLCALSLWLLLYHKTPTCSIEEFDVFALKEITT----NNKTIH 66

Query: 63  YDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDAR 122
           YD+KL N+   +KGIYYD LN+TFY K ++    +GN  F+PFYQGH K THR+  IDAR
Sbjct: 67  YDVKLKNRII-NKGIYYDALNVTFYDKNDI----IGNVNFSPFYQGHHKGTHRVGNIDAR 126

Query: 123 GVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIK 182
           GV WEN TAT A FRVE+ T VR+K + WK+KRHRL L ADL VN+QG LVK+K  KGIK
Sbjct: 127 GVHWENDTAT-AIFRVELATVVRYKHLLWKSKRHRLVLGADLKVNDQGSLVKRKGNKGIK 186

Query: 183 FKSGVWNSKVCN---FYLLGILGIFTYI 208
             SG    K+ N   F LLGILGI  +I
Sbjct: 187 LSSGA--GKINNKGRFELLGILGILVFI 198
[Close]
BLAST of Spo18568.1 vs. NCBI nr
Match: gi|1021032324|gb|KZM90108.1| (hypothetical protein DCAR_022527 [Daucus carota subsp. sativus])

HSP 1 Score: 189.9 bits (481), Expect = 4.600e-45
Identity = 105/179 (58.66%), Postives = 129/179 (72.07%), Query Frame = 1 

		  

Query: 8   CCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKL 67
           CC  C +F+FTSGLTALFLWL+L+ +NPTCSI+ FDV  LNKTAN T  +NHTI +DLKL
Sbjct: 9   CCNFCCTFLFTSGLTALFLWLSLRASNPTCSIQQFDVHALNKTANAT--SNHTIYFDLKL 68

Query: 68  NNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARGVKWE 127
           +NK NKDKGIYYD LNLTFYY  N S   +GN T   FYQGH KNTHR        V ++
Sbjct: 69  DNK-NKDKGIYYDALNLTFYYGTNKS-QRIGNFTIKGFYQGHHKNTHR-----ENNVTFD 128

Query: 128 NATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIKFKSG 187
             + + + FRV++ T VRFKI+ +KTKRHR+ + A + VN+ G   +KKKKKGIK KSG
Sbjct: 129 AVSVSGSVFRVDLETKVRFKIMGFKTKRHRIAVWAQVEVNDNG---QKKKKKGIKLKSG 175
[Close]
BLAST of Spo18568.1 vs. NCBI nr
Match: gi|747094949|ref|XP_011095334.1| (PREDICTED: protein NDR1-like [Sesamum indicum])

HSP 1 Score: 188.3 bits (477), Expect = 1.300e-44
Identity = 105/210 (50.00%), Postives = 144/210 (68.57%), Query Frame = 1 

		  

Query: 6   GGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTF-RNNHTIRYD 65
           GGCCRCC SFIFTSGLTALF+WL+L+T+ PTCSI++F +  LN++ N+T  RNNHTIR+D
Sbjct: 6   GGCCRCCCSFIFTSGLTALFMWLSLRTSKPTCSIQDFYIPALNRSDNSTATRNNHTIRFD 65

Query: 66  LKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARGV 125
           LKL+N   KDKG++Y  ++LTF+Y   L    + N T   FYQGH KNTHR +++DA G+
Sbjct: 66  LKLDNGM-KDKGVHYANISLTFFYNSTLP---IANFTVPEFYQGHNKNTHRRALVDASGL 125

Query: 126 KWENATATMAE-----FRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKK 185
            W +A   +A      FRV + T V+FKI+ W TKRH L + +D++VN+ G   +K  +K
Sbjct: 126 PWADARDAVANGSTVSFRVRLATRVKFKIMVWYTKRHSLVVGSDVVVNDSG---QKVNRK 185

Query: 186 GIKFKSGVWNSKVCNFYLLGILGIFTYILL 210
           GIK KSG  +       LL  L IFT++++
Sbjct: 186 GIKLKSGAPDPATQWVRLLSFL-IFTFLII 207
[Close]
BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA32_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089620 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.300e-118
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 

		  

Query: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60
           MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT
Sbjct: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60

Query: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID 120
           IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID
Sbjct: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVID 120

Query: 121 ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG 180
           ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG
Sbjct: 121 ARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKG 180

Query: 181 IKFKSGVWNSKVCNFYLLGILGIFTYILLW 211
           IKFKSGVWNSKVCNFYLLGILGIFTYILLW
Sbjct: 181 IKFKSGVWNSKVCNFYLLGILGIFTYILLW 210
[Close]
BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEX0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092000 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.800e-88
Identity = 163/212 (76.89%), Postives = 181/212 (85.38%), Query Frame = 1 

		  

Query: 1   MGVEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHT 60
           M  EE  CCRCC SFIFTSGLTALFLWL+L+ +NPTCSIENFDVF LNKTAN+TF+NNHT
Sbjct: 1   MAEEESSCCRCCISFIFTSGLTALFLWLSLRPSNPTCSIENFDVFILNKTANSTFKNNHT 60

Query: 61  IRYDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFV-TLGNATFNPFYQGHGKNTHRISVI 120
           I YDLKLNNK NKDKGIYYDTLNLTFYYKPNL+ + TLGNAT+ PFYQG+GKNTHR   I
Sbjct: 61  ILYDLKLNNKGNKDKGIYYDTLNLTFYYKPNLTLINTLGNATYVPFYQGYGKNTHRKGSI 120

Query: 121 DARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKK 180
           DARGVKWENATAT A FRVE+NT VRFKI+FWKTKRHRLDL ADLLVNEQG L+K+KKKK
Sbjct: 121 DARGVKWENATATTAVFRVELNTLVRFKIVFWKTKRHRLDLKADLLVNEQGSLIKRKKKK 180

Query: 181 GIKFKSGVWNSKVCN-FYLLGILGIFTYILLW 211
           GIK  SGV NS  C+ F LLG+LG+  ++  W
Sbjct: 181 GIKLTSGVGNSMSCSKFMLLGVLGVLIFVHFW 212
[Close]
BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E5Q1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092030 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.900e-46
Identity = 116/208 (55.77%), Postives = 136/208 (65.38%), Query Frame = 1 

		  

Query: 3   VEEGGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIR 62
           V++  CC C FS     GL AL LWL L    PTCSIE FDVF L +       NN TI 
Sbjct: 7   VKQRSCCGCIFSL----GLCALSLWLLLYHKTPTCSIEEFDVFALKEITT----NNKTIH 66

Query: 63  YDLKLNNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDAR 122
           YD+KL N+   +KGIYYD LN+TFY K ++    +GN  F+PFYQGH K THR+  IDAR
Sbjct: 67  YDVKLKNRII-NKGIYYDALNVTFYDKNDI----IGNVNFSPFYQGHHKGTHRVGNIDAR 126

Query: 123 GVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIK 182
           GV WEN TAT A FRVE+ T VR+K + WK+KRHRL L ADL VN+QG LVK+K  KGIK
Sbjct: 127 GVHWENDTAT-AIFRVELATVVRYKHLLWKSKRHRLVLGADLKVNDQGSLVKRKGNKGIK 186

Query: 183 FKSGVWNSKVCN---FYLLGILGIFTYI 208
             SG    K+ N   F LLGILGI  +I
Sbjct: 187 LSSGA--GKINNKGRFELLGILGILVFI 198
[Close]
BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Match: A0A164VC06_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022527 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.200e-45
Identity = 105/179 (58.66%), Postives = 129/179 (72.07%), Query Frame = 1 

		  

Query: 8   CCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKL 67
           CC  C +F+FTSGLTALFLWL+L+ +NPTCSI+ FDV  LNKTAN T  +NHTI +DLKL
Sbjct: 9   CCNFCCTFLFTSGLTALFLWLSLRASNPTCSIQQFDVHALNKTANAT--SNHTIYFDLKL 68

Query: 68  NNKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARGVKWE 127
           +NK NKDKGIYYD LNLTFYY  N S   +GN T   FYQGH KNTHR        V ++
Sbjct: 69  DNK-NKDKGIYYDALNLTFYYGTNKS-QRIGNFTIKGFYQGHHKNTHR-----ENNVTFD 128

Query: 128 NATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIKFKSG 187
             + + + FRV++ T VRFKI+ +KTKRHR+ + A + VN+ G   +KKKKKGIK KSG
Sbjct: 129 AVSVSGSVFRVDLETKVRFKIMGFKTKRHRIAVWAQVEVNDNG---QKKKKKGIKLKSG 175
[Close]
BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Match: F6H2D6_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_19s0014g05430 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.600e-41
Identity = 105/204 (51.47%), Postives = 132/204 (64.71%), Query Frame = 1 

		  

Query: 6   GGCCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDL 65
           GGCCRCC SFIFT GLTALF+WL+L+T+NPTCSI+ F   +LN+T NTT   N ++ +DL
Sbjct: 3   GGCCRCCCSFIFTLGLTALFMWLSLRTSNPTCSIQYFYAPSLNRTLNTT---NSSLYFDL 62

Query: 66  KLNNKENKDKGIYYDTLNLTFYY--KPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARG 125
           KL+N  NKDKGIYYD +NLTFYY   PN S   +GN T   FYQGH KN  R  ++    
Sbjct: 63  KLDN-GNKDKGIYYDPINLTFYYGFTPNFS---VGNLTVPAFYQGHKKNARRRMLVQTPS 122

Query: 126 VKWENA-TATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIK 185
           V W  A T     FR+++ T VRFKI+FW TKR ++ + A + VN      KK  KKGIK
Sbjct: 123 VPWPEARTNGTVWFRMDLQTKVRFKILFWNTKREKISVSAPVEVNATD--GKKIHKKGIK 182

Query: 186 FKSGV---WNSKVCNFYLLGILGI 204
            KSG    W ++      +G+LGI
Sbjct: 183 LKSGAPERWRNRA----PVGLLGI 193
[Close]
BLAST of Spo18568.1 vs. ExPASy Swiss-Prot
Match: NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.500e-32
Identity = 86/190 (45.26%), Postives = 118/190 (62.11%), Query Frame = 1 

		  

Query: 5   EGG--CCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIR 64
           EGG  CC CC SFIFT+GLT+LFLWL+L+   P CSI+NF +  L K  N+  R+N T+ 
Sbjct: 9   EGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNS--RDNTTLN 68

Query: 65  YDLKLNNKENKDKGIYYDTLNLTF----YYKPNLS-FVTLGNATFNPFYQGHGKNTHR-- 124
           + ++ +N  NKDKGIYYD ++L F      K N S  V +GN T   FYQGH K   +  
Sbjct: 69  FMVRCDN-PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWG 128

Query: 125 -ISVIDARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVK 184
            +  ++ + V         A FR+++ T VRFKI+FWKTKR+ +++ AD+ VN  G+   
Sbjct: 129 QVKPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGV--- 188
[Close]
BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 138.7 bits (348), Expect = 4.200e-33
Identity = 86/190 (45.26%), Postives = 118/190 (62.11%), Query Frame = 1 

		  

Query: 5   EGG--CCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIR 64
           EGG  CC CC SFIFT+GLT+LFLWL+L+   P CSI+NF +  L K  N+  R+N T+ 
Sbjct: 9   EGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNS--RDNTTLN 68

Query: 65  YDLKLNNKENKDKGIYYDTLNLTF----YYKPNLS-FVTLGNATFNPFYQGHGKNTHR-- 124
           + ++ +N  NKDKGIYYD ++L F      K N S  V +GN T   FYQGH K   +  
Sbjct: 69  FMVRCDN-PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWG 128

Query: 125 -ISVIDARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVK 184
            +  ++ + V         A FR+++ T VRFKI+FWKTKR+ +++ AD+ VN  G+   
Sbjct: 129 QVKPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGV--- 188
[Close]
BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 114.0 bits (284), Expect = 1.100e-25
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 1 

		  

Query: 8   CCRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKL 67
           CC C F FIFT+ L AL LWL+L+   P CSI+NF +  L+K  N + R+N T+ + ++ 
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSK--NLSSRDNTTLNFMVRC 73

Query: 68  NNKENKDKGIYYDTLNLTF-----YYKPNLSFVTLGNATFNPFYQGHGKNTHR---ISVI 127
           +N  NKDKGIYYD ++LTF         +   V + N T   FYQGH K   +   +  +
Sbjct: 74  DN-PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPL 133

Query: 128 DARGVKWENATATMAEFRVEMNTSVRFKIIFWKTKRH-RLDLHADLLVNEQGILVKKKKK 187
           + + V         A FR+++ T VRFKI+FWKTK + R+ + AD+ VN  G+   K  +
Sbjct: 134 NNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGV---KANE 193

Query: 188 KGIKF-KSGVWNS 191
           K IK  KS  W +
Sbjct: 194 KEIKMEKSNFWKT 200
[Close]
BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Match: AT3G20610.1 (non-race specific disease resistance protein, putative)

HSP 1 Score: 87.8 bits (216), Expect = 8.600e-18
Identity = 62/179 (34.64%), Postives = 97/179 (54.19%), Query Frame = 1 

		  

Query: 14  SFIFTSGLTALFLWLNLKTTN-PTCSIENFDVFTLNKTANTTFRNNHTIRYDLKLNNKEN 73
           + ++ S L AL LWL+    + P CSI  F +  LNK+  ++  +N T+ + ++L N  N
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISS--DNTTLNFMVRLKNI-N 78

Query: 74  KDKGIYYDTLNLTFYYKPNLSFVTLGNATFNPFYQGHGKNTHRISVIDARGVKWENATAT 133
             +GIYY+ L+L+F  + N S + + N T   FYQGH K   +      + + + N T  
Sbjct: 79  AKQGIYYEDLHLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWG----QALPFNNQTVI 138

Query: 134 MAE-------FRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKKKGIKFK 185
            A        FRV++   V++K++ WKTKR++L    +L VNE G    K K+ GIK K
Sbjct: 139 QAVLPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMK 190
[Close]
BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 57.4 bits (137), Expect = 1.200e-8
Identity = 44/181 (24.31%), Postives = 86/181 (47.51%), Query Frame = 1 

		  

Query: 9   CRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKLN 68
           C      +F  G+ A  LWL+L+   P   I++F V  L++        N  I +++ + 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGV---ENARIAFNVTIL 106

Query: 69  NKENKDKGIYYDTLNLTFYYKPN-LSFVTLGNATFNPFYQGHGKNTHRISVIDARGV--- 128
           N  N+  G+Y+D++  + YYK   +  + L     NPF+Q     T     +    +   
Sbjct: 107 NP-NQHMGVYFDSMEGSIYYKDQRVGLIPL----LNPFFQQPTNTTIVTGTLTGASLTVN 166

Query: 129 --KWENATATMAE----FRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKKK 180
             +W   +   A+    FR+++ +++RFK+  W +K HR+  + +++V   G+++ K   
Sbjct: 167 SNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGLILPKFNH 219
[Close]
BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 55.5 bits (132), Expect = 4.700e-8
Identity = 48/182 (26.37%), Postives = 81/182 (44.51%), Query Frame = 1 

		  

Query: 9   CRCCFSFIFTSGLTALFLWLNLKTTNPTCSIENFDVFTLNKTANTTFRNNHTIRYDLKLN 68
           C    S +   G+    LW++L+   P   I  F +  L++     F  +H I + +  +
Sbjct: 45  CAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDG--FETSH-ISFKITAH 104

Query: 69  NKENKDKGIYYDTLNLTFYYKPNLSFVTLGNATF-NPFYQGHGKNTHRISVIDARGVKWE 128
           N  N++ GIYYD++  + YYK       +G+    NPFYQ   KNT  I    +R     
Sbjct: 105 NP-NQNVGIYYDSMEGSVYYKEK----RIGSTKLTNPFYQ-DPKNTSSIDGALSRPAMAV 164

Query: 129 NATATM----------AEFRVEMNTSVRFKIIFWKTKRHRLDLHADLLVNEQGILVKKKK 180
           N    M            FR+++ + +RFK+  W +K H++     + +   G+L+   K
Sbjct: 165 NKDRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATK 217
The following BLAST results are available for this feature:
BLAST of Spo18568.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902210276|gb|KNA16378.1|1.8e-118100.hypothetical protein SOVF_0896... [more]
gi|731364924|ref|XP_010694242.1|1.3e-8776.8PREDICTED: protein NDR1-like [... [more]
gi|731364926|ref|XP_010694244.1|7.0e-4655.7PREDICTED: protein NDR1-like [... [more]
gi|1021032324|gb|KZM90108.1|4.6e-4558.6hypothetical protein DCAR_0225... [more]
gi|747094949|ref|XP_011095334.1|1.3e-4450.0PREDICTED: protein NDR1-like [... [more]
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BLAST of Spo18568.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RA32_SPIOL1.3e-118100.Uncharacterized protein OS=Spi... [more]
A0A0J8BEX0_BETVU8.8e-8876.8Uncharacterized protein OS=Bet... [more]
A0A0J8E5Q1_BETVU4.9e-4655.7Uncharacterized protein OS=Bet... [more]
A0A164VC06_DAUCA3.2e-4558.6Uncharacterized protein OS=Dau... [more]
F6H2D6_VITVI1.6e-4151.4Putative uncharacterized prote... [more]
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BLAST of Spo18568.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDR1_ARATH7.5e-3245.2Protein NDR1 OS=Arabidopsis th... [more]
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BLAST of Spo18568.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G20600.14.2e-3345.2Late embryogenesis abundant (L... [more]
AT3G20590.11.1e-2539.9Late embryogenesis abundant (L... [more]
AT3G20610.18.6e-1834.6non-race specific disease resi... [more]
AT4G05220.11.2e-824.3Late embryogenesis abundant (L... [more]
AT1G61760.14.7e-826.3Late embryogenesis abundant (L... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 6..198
score: 1.9
NoneNo IPR availablePANTHERPTHR31415:SF22LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATEDcoord: 6..198
score: 1.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0010215 cellulose microfibril organization
biological_process GO:0016049 cell growth
biological_process GO:0032259 methylation
biological_process GO:0019953 sexual reproduction
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0015812 gamma-aminobutyric acid transport
biological_process GO:0006629 lipid metabolic process
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0016310 phosphorylation
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006396 RNA processing
biological_process GO:0007155 cell adhesion
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0002213 defense response to insect
biological_process GO:0050832 defense response to fungus
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005576 extracellular region
cellular_component GO:0005829 cytosol
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0000785 chromatin
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0015185 gamma-aminobutyric acid transmembrane transporter activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0043531 ADP binding
molecular_function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
RNA-Seq Expression