Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCGATATGATTCGGGCCTATTACAATCCGGCTAAACTCGTTTACAACCCGACCCGACTATGGTCAGTCCGATTATAATCCGATTCGATATGAACCCGAACTAAATTAACCCGAACCAATCTAACCCGTTAATTTTTGAACCCGACCCGATCGATTACAATCCCTGATAAGCCCGATCTGATGCGAATCCTACCCGATATGAGTCCAACCCGATATGTTTATGAATCTATTACAATCGGACTAAACTCGTTTACAACCTAACCCGTTTGCAAGAATGAACTTGTTTCAACCCGAACCGATAAACCCCACCCAAACCCGATCCGTTATCGAAATTGACACCCCTATAAATAATAATATTATATTTAGATCGTCAGCATGAGTGCATCCTCCCGGAGAAAGGGACAATACTGGACCGTCGCTCATTCACTCGTCACCGTTGGTGCAAGTACCAATACGCGACTACACTACCCTCCTACAAAGCCTCTGCACGTGTTGCCAATAAACTACGCAACTAGAAAATCCCCACTTTTTTACCCACGGCAATAATCATTCGCACCAGAGAAAAAATAGTAATAATCATTCACTCTCAAGCAAAGACAAAAATCAAGATCCCAATTAGATTAAACACTCCAAATTAATATAGAATCATACTTTCTTCAATACCCAGAAAATCTATTAAAGACACAACACTATAATGTTAGAAACTGCCCCATCTTTATCAATTTATAACACAATTGATGGTGGGGTTGATGAACATGAGGTTAAAAATAGGGAATTTCTGGGAAAATCACTGAAAAATGGGGAAAAGGTTGATGGGGATTTACCGGGTAGTGGTGAATTTAGTTTTGTGAAACCAAATATGGATTTGATCAAGGAAGAAGGTGATGAATTTGGTGAATCTGTTGATGGGTTTGAGAAGAAATTGGTTGGGGAAGAAGTTGAACCACCACCTAGTCCACCTATGTATCTTGCTTCTGGGCTTGGACTTGGGATTACAGATGGATTTGATAGTTTTAGGGAGGATAGAGAAAATGATGAGGAGTATTATCGAGAGTTGCTTGATGACTTTCCTAATCATCCCTTGGTTTTGATCAAGTTTGCCCAGTTTTTTCAGGTCAGATTTTGTTATCCATTTTTTCCAATCTTTCATCATTCTCTATGTTTTTGGTCTGAATAAGCTGTCAAGGCATTAGGGATCCGTATCCATGACCTATTTTCTACATCCCAATTGTTTTTTTATACTTCCTCGATTCATTTTTACTCGCAATGTTTGAAACTTTCACGCATACTAATACACAATTTTGATCATTGACATTTTAAATTCTATTTAAGCAAAAATTATAAAAAATTAATATTTTAACAATATATATTTAGACGAATCTAACAAGATCCCATATATCCCACATGACCTATGTTTTAACTCACATGACCCATGTTTTAACTTAGGTATAAAACACCAACAATAGTCAAAGTATAATTTGTAAATAGTGTAAAAATTACAAAGGTTGCAAAGATAAAAAATAGGAGGAAGTATATCTTTATTATAAACTGTCACACTTGCATCATTATTGTATAAAATTCAACTATTTTTCCTTAATATTTGTGTTATAAACAAAAATAATAAATGCAACCTAAAATCCAAAAACCAACAAAAGTCAAATTACAGTATTATGAAAGATAGGTTATAGTTGAACAACGGTTGACATAGGTACGCGACCAAGTGTCAGAGGTCGTTTATAAAAAGTTCCACGATTTTGGCCTATGTGTTAGAAGTGTCCATGTCAGATCCAACACGTGTACTTGAGATTGAGTTGAAATGATTTTGATGTGTTAGATAGCTTAAGCAATTCATTGCATTAGTGTAGAAAAACAAACTTGGAACACACATACTTGGTATATACGGAGTAGTTGGTTTATTGTTGTTTAAAGTTTGGGTAAAGTTGGTGAATAATTTGTTGGCAAACAGAGAAAAGGAGACCTTGAAGGAGCAGAAGAGTATTATTTCCGTGCCACAAAAGCTGACCCTGGTGATGGAGAAATTTTGTCACAGTATGCTCTACTGGTTTGGGAACTCCATCGTGATCAAGAAAGGGCCTCGGCATACTTTGAACTTGCTGCTCAAACTGCTTCTAAGGATTGGTGTGTAGTCTTTAACTTTTTTATTCTTCATTTTTCTAATCAACTAACTTCACCTTTTATTGCACATATACACAATCTCTTTCTTTTAATTCATAGTACATACACACAAATCACACTATTTCATCATCTTTCTTAGTTTCATCATAGCTATTATTGTCGTTGCCATACCCAAGAAAAAATGAGGGGAGATATTCTCATCAATTACTTAACTTGTGTTCATCATCATATCCTTCAAGGCTGAAATAGGCTGTACGGTGTCGGTGTGTTCTTTTCAATAAAACACCTCAACTTAAAATTGTCAAACATTGTATCAGAAATTAGGGGATTTTCTTTTTCATACACAAACCAGGTTATGCTCATGCAAAGTTCCAGGTTTCAATAAAAGTTGGTTTTTGCGAGACAAATGTAGGTTTATACATTATACAAGAAGCCAATAATAACTTAGTATGCTTCATTCCTAATCAATATATTCTGATAAAAATAATAAGGTGCATTTAATTGATCTGTCATTCTGTCGTATGCAATAGTTTCTTAAAATTTTGTAACAATGGTGTCTCGAGTACATATTCCAGCACCTGTGAATACAAACATATTTGAGCAGCAATGAATGATTTTGACTCAGGCTCATGGAGTCATGGGTGTATGATTATGATATATGATATATGAGATCCTTTCCCATTTAAATGCAAACGAAGAATAAAGTGTTAGGTATGGCCTTAAGCTATCCACGATGTAAACTTTGATAATGTGTTAGTTAGGAAGTTGTAAGTTGACACTAAGTAATTGTTCTGGAGTATTGTCATTCCTGTCTCATTATGCAATAGAAGCTCCAAAGAGTAATTTGGCACATATTTGTTGAATTGTTGATAATCTTTACTCATGTTTCAGCAATGTTTTGGCATCATATGCTAAGTTCCTCTGGGAAGTAGATGATGATGAAGATGAAAGTTCTATTCAACCTGATCATGGTCAGGTATGAAGTTCATGTAAAATTGAATACTTGATCTTTTAATCTTGGGAACCTAATGTTATTTGTTTTCTATCATCAGGGAGACATACAAAAATCCACTCACTTGCATCCTGCTGATGGGATTGATAATGGGAATGACGGTCCTATATTTGAAGCAGGAGCCCCAATAAATAGTGCTGATGTAGAAGATTACTATAAAAGAATGATGGACAAAGATCCTTCTGATCCCCTCTTTCTGAAGAAGTATGCTCAGTTCCTTTATCAGGTAAAACCTCCAACTGTATTTTCTCAGCATATCTAAAATTTAATGTTTGTCCGTGAGGATTATACATTTGTACTCCCTCCCTTTCAAAATAATAGGGACAATTTCCTTAAATGGGTGTTTTAAGATAATACGGATAGTGCTTTGTTCAATTTTTGGTATCATATTTAATGCATTTACACTATTCTTCTTTCCACTTACTTACAACATTCCACTCAATCTATTTTTATATTCTCTTTTTACTCATAACTTATCATTCAACCTACTTTTTTTATTATTCTTTCTTACAACATTCTACTTTCCCATACTTATTTCTTACTTTCCAATCATTTATCTTGGTTGTTGTGAAATGTGTAAGTGTCCCCATTATTTCGAAACGGATTGAGTATTATAAGTGTGAAACAGAGGGAGTATTATAACTGTAATCTGTTACACCATTGAATTGATCACAATCTGATTCTGAGAGAAAATCCTTTTTGTTTTATTCGGCATACTGTTTCCTTAAGCTCCCTTCCTACCACTCCCTGGGCCTGAAACTGTTGCGACCTAGAACATATTAGGTGCACCCGAGTGCATCATCCAGTCTCTCACATTGTTCTTTTACTGTGAGGAGAAAATGTAAGAGGGATCATCAACGGGCATTAAAATACCCTTAGTTGCATAGTGCACCCGGGTACACCTAATAATTTTCAGTTACGACCTACCCCAACTTGTTGAACCAATTCCACACAACCATTAGAATATGGGGCGTCATCTTTCGAGTCTATGATGTCCTGAGACTGCCGTTATGACCATTATTGGCACATCCCCTTTGGTTAAAATTTCTTGTACATGGTAACTCTTTTGGACCATGTTAACCATATCAGGAATCTGACTTCTTTGGTTGATTATGTGTTCTAATGACAGTCAAAGGGTGACCTCCAAGGTGCGGAAGAATACTACTCACGTGCTGTACTAGCTTACCCACAAGATGGGGAGCTGTTGTCGCAGTATGCAACGTTAATTTGGGAACTTCACCATGACCAGAAAAAAACTTTATATTACATTGAACAAGCTGTTGAAGTTGCCGCTGGAGATTGGTATTAATTTCCCAAGTCTTATAGGAATTTAAAATTCAAAAAGTTTATATTCCACACATATTTTTCAGAATTTCTTATCTAAAATGTACTGATTTATGCTCGTATTCTGCAGCAATATTCTCGCAGCATATGCTCGTTTTTTGTTGACCATTGATGATGATGATGATGATGATGATGATAAATATTAGCGCACTTGTTTTTCATAGCGAGTTTCAGGTTGTACAGTTTTAAACAGCATAAGGAATCAAATCGTGATGCTTAATAGGCGACATTTCTGTTTTTGTTCTGCTTCTCTTCTCCTTGTTGGAAGGGTTGTAAGTTTTTCATCCGTGAGAACAAACAAGGTGGTGAAATTATTATACTAGATGCAGTGACTATATCCTGAATCCTGATTAGTAAAGCCATGTATATTAGCCTATATCTTCACCAGTAGTTTGTAATTATAGCTGCTCATATATCACGCCAATAATCCTGACAAAGATATGTCGTAGGCTTATGACTATGTTTTTTCTTTCATCCTTCCATAAATTCCAAATTCTGGTTTTTTGTACACTTGTATTCTGGCAAACGAGAGACATTGAAATCCTAAATAAGC ACCCGATATGATTCGGGCCTATTACAATCCGGCTAAACTCGTTTACAACCCGACCCGACTATGGTCAGTCCGATTATAATCCGATTCGATATGAACCCGAACTAAATTAACCCGAACCAATCTAACCCGTTAATTTTTGAACCCGACCCGATCGATTACAATCCCTGATAAGCCCGATCTGATGCGAATCCTACCCGATATGAGTCCAACCCGATATGTTTATGAATCTATTACAATCGGACTAAACTCGTTTACAACCTAACCCGTTTGCAAGAATGAACTTGTTTCAACCCGAACCGATAAACCCCACCCAAACCCGATCCGTTATCGAAATTGACACCCCTATAAATAATAATATTATATTTAGATCGTCAGCATGAGTGCATCCTCCCGGAGAAAGGGACAATACTGGACCGTCGCTCATTCACTCGTCACCGTTGGTGCAAGTACCAATACGCGACTACACTACCCTCCTACAAAGCCTCTGCACGTGTTGCCAATAAACTACGCAACTAGAAAATCCCCACTTTTTTACCCACGGCAATAATCATTCGCACCAGAGAAAAAATAGTAATAATCATTCACTCTCAAGCAAAGACAAAAATCAAGATCCCAATTAGATTAAACACTCCAAATTAATATAGAATCATACTTTCTTCAATACCCAGAAAATCTATTAAAGACACAACACTATAATGTTAGAAACTGCCCCATCTTTATCAATTTATAACACAATTGATGGTGGGGTTGATGAACATGAGGTTAAAAATAGGGAATTTCTGGGAAAATCACTGAAAAATGGGGAAAAGGTTGATGGGGATTTACCGGGTAGTGGTGAATTTAGTTTTGTGAAACCAAATATGGATTTGATCAAGGAAGAAGGTGATGAATTTGGTGAATCTGTTGATGGGTTTGAGAAGAAATTGGTTGGGGAAGAAGTTGAACCACCACCTAGTCCACCTATGTATCTTGCTTCTGGGCTTGGACTTGGGATTACAGATGGATTTGATAGTTTTAGGGAGGATAGAGAAAATGATGAGGAGTATTATCGAGAGTTGCTTGATGACTTTCCTAATCATCCCTTGGTTTTGATCAAGTTTGCCCAGTTTTTTCAGAGAAAAGGAGACCTTGAAGGAGCAGAAGAGTATTATTTCCGTGCCACAAAAGCTGACCCTGGTGATGGAGAAATTTTGTCACAGTATGCTCTACTGGTTTGGGAACTCCATCGTGATCAAGAAAGGGCCTCGGCATACTTTGAACTTGCTGCTCAAACTGCTTCTAAGGATTGCAATGTTTTGGCATCATATGCTAAGTTCCTCTGGGAAGTAGATGATGATGAAGATGAAAGTTCTATTCAACCTGATCATGGTCAGGGAGACATACAAAAATCCACTCACTTGCATCCTGCTGATGGGATTGATAATGGGAATGACGGTCCTATATTTGAAGCAGGAGCCCCAATAAATAGTGCTGATGTAGAAGATTACTATAAAAGAATGATGGACAAAGATCCTTCTGATCCCCTCTTTCTGAAGAAGTATGCTCAGTTCCTTTATCAGTCAAAGGGTGACCTCCAAGGTGCGGAAGAATACTACTCACGTGCTGTACTAGCTTACCCACAAGATGGGGAGCTGTTGTCGCAGTATGCAACGTTAATTTGGGAACTTCACCATGACCAGAAAAAAACTTTATATTACATTGAACAAGCTGTTGAAGTTGCCGCTGGAGATTGCAATATTCTCGCAGCATATGCTCGTTTTTTGTTGACCATTGATGATGATGATGATGATGATGATGATAAATATTAGCGCACTTGTTTTTCATAGCGAGTTTCAGGTTGTACAGTTTTAAACAGCATAAGGAATCAAATCGTGATGCTTAATAGGCGACATTTCTGTTTTTGTTCTGCTTCTCTTCTCCTTGTTGGAAGGGTTGTAAGTTTTTCATCCGTGAGAACAAACAAGGTGGTGAAATTATTATACTAGATGCAGTGACTATATCCTGAATCCTGATTAGTAAAGCCATGTATATTAGCCTATATCTTCACCAGTAGTTTGTAATTATAGCTGCTCATATATCACGCCAATAATCCTGACAAAGATATGTCGTAGGCTTATGACTATGTTTTTTCTTTCATCCTTCCATAAATTCCAAATTCTGGTTTTTTGTACACTTGTATTCTGGCAAACGAGAGACATTGAAATCCTAAATAAGC ATGTTAGAAACTGCCCCATCTTTATCAATTTATAACACAATTGATGGTGGGGTTGATGAACATGAGGTTAAAAATAGGGAATTTCTGGGAAAATCACTGAAAAATGGGGAAAAGGTTGATGGGGATTTACCGGGTAGTGGTGAATTTAGTTTTGTGAAACCAAATATGGATTTGATCAAGGAAGAAGGTGATGAATTTGGTGAATCTGTTGATGGGTTTGAGAAGAAATTGGTTGGGGAAGAAGTTGAACCACCACCTAGTCCACCTATGTATCTTGCTTCTGGGCTTGGACTTGGGATTACAGATGGATTTGATAGTTTTAGGGAGGATAGAGAAAATGATGAGGAGTATTATCGAGAGTTGCTTGATGACTTTCCTAATCATCCCTTGGTTTTGATCAAGTTTGCCCAGTTTTTTCAGAGAAAAGGAGACCTTGAAGGAGCAGAAGAGTATTATTTCCGTGCCACAAAAGCTGACCCTGGTGATGGAGAAATTTTGTCACAGTATGCTCTACTGGTTTGGGAACTCCATCGTGATCAAGAAAGGGCCTCGGCATACTTTGAACTTGCTGCTCAAACTGCTTCTAAGGATTGCAATGTTTTGGCATCATATGCTAAGTTCCTCTGGGAAGTAGATGATGATGAAGATGAAAGTTCTATTCAACCTGATCATGGTCAGGGAGACATACAAAAATCCACTCACTTGCATCCTGCTGATGGGATTGATAATGGGAATGACGGTCCTATATTTGAAGCAGGAGCCCCAATAAATAGTGCTGATGTAGAAGATTACTATAAAAGAATGATGGACAAAGATCCTTCTGATCCCCTCTTTCTGAAGAAGTATGCTCAGTTCCTTTATCAGTCAAAGGGTGACCTCCAAGGTGCGGAAGAATACTACTCACGTGCTGTACTAGCTTACCCACAAGATGGGGAGCTGTTGTCGCAGTATGCAACGTTAATTTGGGAACTTCACCATGACCAGAAAAAAACTTTATATTACATTGAACAAGCTGTTGAAGTTGCCGCTGGAGATTGCAATATTCTCGCAGCATATGCTCGTTTTTTGTTGACCATTGATGATGATGATGATGATGATGATGATAAATATTAG MLETAPSLSIYNTIDGGVDEHEVKNREFLGKSLKNGEKVDGDLPGSGEFSFVKPNMDLIKEEGDEFGESVDGFEKKLVGEEVEPPPSPPMYLASGLGLGITDGFDSFREDRENDEEYYRELLDDFPNHPLVLIKFAQFFQRKGDLEGAEEYYFRATKADPGDGEILSQYALLVWELHRDQERASAYFELAAQTASKDCNVLASYAKFLWEVDDDEDESSIQPDHGQGDIQKSTHLHPADGIDNGNDGPIFEAGAPINSADVEDYYKRMMDKDPSDPLFLKKYAQFLYQSKGDLQGAEEYYSRAVLAYPQDGELLSQYATLIWELHHDQKKTLYYIEQAVEVAAGDCNILAAYARFLLTIDDDDDDDDDKY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18629.1 vs. NCBI nr
Match: gi|902239873|gb|KNA25772.1| (hypothetical protein SOVF_003830 [Spinacia oleracea]) HSP 1 Score: 751.5 bits (1939), Expect = 6.900e-214 Identity = 369/370 (99.73%), Postives = 369/370 (99.73%), Query Frame = 1
BLAST of Spo18629.1 vs. NCBI nr
Match: gi|731374893|ref|XP_010667099.1| (PREDICTED: uncharacterized protein LOC104884185 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 459.5 bits (1181), Expect = 5.400e-126 Identity = 239/375 (63.73%), Postives = 288/375 (76.80%), Query Frame = 1
BLAST of Spo18629.1 vs. NCBI nr
Match: gi|731374891|ref|XP_010667097.1| (PREDICTED: uncharacterized protein LOC104884185 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 454.9 bits (1169), Expect = 1.300e-124 Identity = 239/376 (63.56%), Postives = 288/376 (76.60%), Query Frame = 1
BLAST of Spo18629.1 vs. NCBI nr
Match: gi|567854461|ref|XP_006420350.1| (hypothetical protein CICLE_v10004771mg [Citrus clementina]) HSP 1 Score: 338.6 bits (867), Expect = 1.400e-89 Identity = 192/395 (48.61%), Postives = 254/395 (64.30%), Query Frame = 1
BLAST of Spo18629.1 vs. NCBI nr
Match: gi|568872938|ref|XP_006489619.1| (PREDICTED: uncharacterized protein LOC102625304 isoform X1 [Citrus sinensis]) HSP 1 Score: 333.2 bits (853), Expect = 5.900e-88 Identity = 188/395 (47.59%), Postives = 251/395 (63.54%), Query Frame = 1
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3R8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003830 PE=4 SV=1) HSP 1 Score: 751.5 bits (1939), Expect = 4.800e-214 Identity = 369/370 (99.73%), Postives = 369/370 (99.73%), Query Frame = 1
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B3B5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006620 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 3.800e-126 Identity = 239/375 (63.73%), Postives = 288/375 (76.80%), Query Frame = 1
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Match: V4S9J6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004771mg PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 9.700e-90 Identity = 192/395 (48.61%), Postives = 254/395 (64.30%), Query Frame = 1
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Match: A0A0B2NV62_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_000694 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.000e-86 Identity = 182/380 (47.89%), Postives = 238/380 (62.63%), Query Frame = 1
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Match: I1NHZ1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G199800 PE=4 SV=2) HSP 1 Score: 328.6 bits (841), Expect = 1.000e-86 Identity = 182/380 (47.89%), Postives = 238/380 (62.63%), Query Frame = 1
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 171.0 bits (432), Expect = 1.400e-42 Identity = 124/341 (36.36%), Postives = 176/341 (51.61%), Query Frame = 1
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 6.100e-27 Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 1
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 99.0 bits (245), Expect = 6.600e-21 Identity = 52/127 (40.94%), Postives = 82/127 (64.57%), Query Frame = 1
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 1.200e-19 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 93.6 bits (231), Expect = 2.800e-19 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18629.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18629.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18629.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo18629.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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