Spo18644 (gene)

Overview
NameSpo18644
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPolypyrimidine tract-binding protein 3
LocationSpoScf_02285 : 36818 .. 46679 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATGTGAGTCTCTGACAATCAACTAATTTAGCACCAAGCCACCAATCTACTAGTATACAAAACGTTCAACAACCAATTACTAAATGAGACCTATTTTTCTTTATTCACATACTAGAGGCGGATCTTGGGTGTATCTTAAAGAGACTAGACCCCACTACAAATTTTATCAAAGCATTTTCAATTCCAACCCTTAATAAATTTTGAGTAAAATTGTACAAATCTCATACTGAATTGTCTAACTCTTGTACTACGGATCTTATTAACGTTATATTAAAAAAAAGTAAAATTATTTGACATCCGTCATAACTATTTATCTTCTCTCTAACTACCGTACTACATCCGTTTCGAAATAATGAGAATGGTTTCCATAGGTAGGTGTTTCAAAATAATAAAGACACTCTACTTTAATCTATTTTTGGTTAGGTGACTCGTCATATTTAATGTATTCACACCCATCTTTTTCCCACTTTACTTACAACATTCCACTCAATTTATTTTTATATAATTTTTTACTCATAACTTTTCACACAACCTATTTTTTTTATTTTTTTTTACACCATTTCACTCAACCTAATTTTTATTATTATTTTATTACAAAATTCCATTTTTCCATATTTATTTCTTACTTTTCAATCATTTATCATAATTTTTGTAATTTGTGTAAGTTTTCTCATTATTTCGAACGGAAGGAGCATAAGATTATAAGACAAAGTATGCGTCAAATTGAAATTACAATCTGATAGGTGGAGACAGAATGAAGTGTTTGAGCAGCTTTTCTTTGTGCCCTTTATGACGTTTTGTTGGATCATGAGTGCTTAATTAGGTTAAATTAGTACGAGTACTTCAAAATTGGAGGAAAATACCAAAAAAATTAACAAAAAGAAAAATTAAAAAAAATAAATCATTTCACTTTTTTTTTTTAACAAACTCTCGATTCGTATCGTAGGGCTTCCATCCCTTTCTTGTTCTTCTGCTTCTTCACCCTCGCATCCTCCTTTCTTTTAACATCTCTTTCAATCTTCTCCATTTTTCTCTCTCCTATTAAGCTTCACTGTGAGTCCTTTCTCCTAATTATTATCACTTTCTTCATTATTTTTTATTTTTAGGGTGGTTGTTTTATGGGTTCTTGTTAATTTGATTAATTTTTTAATCCTTCTGGTGTTTTGGGTTTGTTGCTAATGCATCTGATTTCAATTTTTTTTTGGTGGGTTGCTTTTATGACGTTATTTATGGGGAATGATTCAATTTTATTTTATTTTTCTCCTTTTCGTGTATGTGGGTTTTACAAATGTGATGTTTTGTGTGATTGCAGGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGGTAACACTCATTGGTTGTTTTACTTATTTATTTGATTAATTTTATGGAGGTTAGTGTATGTTGATTGCATATTAATGGAATTTTACAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGTTTTCCTCTTATTTTACCCTCATTGTTATGTTATGGGGTATGTTATCTATGTGTTGAAATTTAGGTAGACAATATAGTCACTTACCGAGACTGTCTTACAGTAATTTATTGCGATACATTAAATATTTTGTCACTGTCCTTTAATACCGGATTTTGTCATACTTAGTATGATATTGATTCTCCTCGAGTGTCAATTTAGTTACTTGAATGATCAAGGATGACCACCTACCTTCTCAGGTTCCCTTATATGTGGGTGGTGGGTGGTGGCTGGTGGGTTTCATTCACAGTATTCACACTTTCTTTCAAGGCACTAAGAATTTGAAAGTATATTCTTTGTGTTGTAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGTATTGTCCTTGTTGGCTCATATCTGTTGATTTCCTTCTTTTTACCCCCACCTATTCACTCATTTTGTTGTGATTTCTGAGGCGTTACCATTTGGTGAACCTTTGATGATCCATAAGTTTAATTATTTGGTTAACTTCTTGATGGTTGCTAACTACTGCTAGTTGAGTAAAATGTTTCAGTAATTGGTTGCAATAGGCCATGTTGTTCATTAATGCTAGTACTATAGGTGTATTGCCTGCAGTTCCTTTTGATTTTGATTACTTCGGTTTTCCAATTTGCAGACAATTTTCTGGTTTTTGCAACGTAGAGTCCTAAAGTTATTATTTTGCTTAATATTTGCATTGGGAATGGTTTAATTCTGCATAAAGATGTTGATAAAAGTAACTCAAAAGCAAGATGACTAAATAAGAAACATAGAAGGCTTAGTAAACTGTATAGATTTTCTTTTTATTGCGAAGTAGCAAAATGGCCATAACTTTAATCAAAAGTCTATTCAAAACAGCTTCTATATTAAGTAGTTGTAAGGTTGCATACACTTAACTCACCCCACCATTTCCGAGAGGCTCAAGTCAACAAGTTGTTGATATTGTTGCCTGTGTAATATATTCTGTGGTGGTTGTGTTTTGTTGAGCTTGAGCTTGAGCTTGTTTTCTGAGTAAGCAGAAGAAACTGGACAGAGGCTTCTATGACTCTGGGATTTCATCAATGCAAAAATTGGGTTAACAGCTATTTGAAGTTGTTTTTGTCCTGATGAACAAAAGAAAGTGATACAGAATGCCAAGTGTAATAGCCATTGTTGATTGTTCCAAAAGGAAAACTTTAGTTCTTCTAACAGTCATGTGGCTTTAAAAACTAAAAATCAATATACATAGAAGTTCACTATGATTTGTTTCTCAGTGTTAAATAGACATTGGGCTGATGTGATGTTGCTGATGTGCCGAGCTTGGGTATGTTCTCTGAAGCACCACAAAGAGGCTTGAGCACTCTCTTCTCTCTGTTTTAAGAAATCTTTCTTACTTACAAAGGCAGAACCTATTTTGTTTCCTGTTGTTACTGTCTTCTACATTTCCTACTTTCAGCATTAAATTTTCCATCTGCTGTCCTTGAGTTTGCCCTCTTTTGTTTGCTACCTTGTGGAGTCTAGTTTTCTAATTTACCATATCCTTCTTTCTTAGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGTTAGTACCTAACATATGAATCTAGTCAGATTTAATTAGTGTGGCAAAATTAATGCTACAACAATGTCACTTTGGATTACTTGGTTGGTTATAACTAGCGTTTTTATGATCACACAATCATGCTAGAAACTGTTAAGATGTTGTGCATCCGGTGATACATGTGATTTTCAAGCCCTAGCGTGACCACCGCTATTTATTCCACCTCTTGCGAGGCTTGTGGCAAATTGTGTGAATCGAATAATTGTTGCCAGTGTTTGAAAAGGACATAGGGCTTGTATATCAAGTACGTAACAGTAATAAAACTTCATGATTATGTGTAGATAATCCCGGTCTGCCTCGGTACCTTCCAGTGTATAAAAAGGCTAGGCTCTGAGGCGCAAGGCGATTGGAACCAGCGCCTTTTATTGTCTAGGCGAGGCGATTTCGATGAGGCGCACCTAAGGCGCAAAAAGGCGCACCAAGGCGCACAAAGGCGCACTTTGAGGCGCAAAAAAGGCGCACTTACGAAGGCACACACCATTTTTTCACTTTTTTTTAACTTTTTATTAGGGCGCCTCACTTCAATGAGGCGCACCGAGGCGCACCGAGGCGCGCCTAAGGCGCTGGGAACTCCAAATCGCCTTGTTGCGCCTTGAGCCTTTTTATACATTGGTACCTTCTGACATTGTAAGATTCATATGGACACAACTTTTCACACTTTTCGTCAAACAGAGATGCGCAGAGTTTGCAAGAAACTTCTTATATCTTCCCAACAAACTGCCTTACATCAATTTTTTGTCCACTGATTTTATTGCAAATATCCAGGGATATGTGTGTCCTGTTCTTGTTTCTGCATCCTGTGATAGATTGGAGCTGTATATTGTTTAATCACTCTTTAAGTAAGCAATCGGAACCAATAGTAGTTGTAATAGTTGATGCAATTAAATCATCTACGTTGGAATACAGCTTAGGTAGAGAAAGTAAATGGAGATGACAGAATAATCAACATACTTTATCTTTCCCTAAACCCTTTATTTATAGACTAACGAACTACCCTCTTGTTGAATAAGGTATCCATAACAACATTGTTACCACACTTCCTAATGTGCCCTTCTCCTATGGTGCTATACTCGATGCATTTCACTTCCTTCTTCATTTGAGGTGTGGAGGGCTGGATTTAGGAGAGATTATAGGAAGGGTGATGAAAACTGGTAGGGGGAAAAAAGGGAAGAAGACTTTCCATTTAGTTTTTCCAATAAGGCTCTCATTCTCATATGAGGATTCAATCCACTTTCTTGCAAGGAGCACAAGGTGTCCACAGGCAGATGGATCAACTTAAGATGGTCATCGTAGCTTTTGAGAGGTTCTCTAGCAAAGTTGGGTGGATTTAAGTTTATCTTTGGTCGTTCATCAACAACAAACAACTTTTTTTCTACTGAAAAGCATTATCTTTATACTAATAATTCAGAAGCATATCAAAAAACAGAAGGGATTTGTTAAGCATAATACGTCTTACGTGTCAGTCACCTCTGTTTTTTCTTTTTTGTGGCAGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGTTAGTTTCTTCCACCACGCTTGCCTTTTGTAGTTTCCCTGATCAGTCTTCCAGTTGACATGATTTATTAAAGTGGCAAATGAGTATTAACTTCAACTTATTTTATTAATATTCCACTGCCACATTTTGTGCAAAATCCTAAAGTTGTAATTGTAATTATTCATTTTCCTTCTTATTTTTGTGTAGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGTCCGTTCCATTATCTCTGTGAATTATTAGAACAAAATTATGTATCTTGCTCTCTGGATTATCTGAAACTGTGCATTTTGCAGGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAAGTAGGTTTTATTCTTCTTCCCCTGTCAAAATTGGATTCCATAAAAGCATTATTATTATTACGAAAGCTATCTTATTATATATCTATCGTTTCCTTATGTTGCAGCCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGGTAAGGTTTGAATAGTTCAGGGAAATATGCTGTGTTACCATGAGATTTAGGGTATATGAATTTTGTTACTTGAGTTTCTTTTAATTAGTGCTCGTTAAGGTTTGGTCTTACCTCTATAGCTTTCTTTTAGGCTCTGCTAGTTGTGATTTAGAGTTTTTCTGTTCAGCTCAAAACAATATGTTTTAGCTCTTTTGTTGTTTTCTATAGTGACTCCACGAGTCCATGTACACACTGTGTATACTAACAAGGAAAATTTGACATGAATAATCCAAATTTTCACTCATTTTCTATAATAATCCCAACTTTGGAATATTTTAGAATAAACCAAACTTTTGGGGTTACCTTCTCAAAATAATATGAAGTCTTCATTTTTTTGTCATTACTAAACCATTTTGGGTCTATTGTACATAGGCAATTGATAGTTTGGCTTATTTTAAGAAGATATACCGGAAAGTTGGGATTATTCCAGAATAATCCAAAGTTGGGATTATTTTCAGAAGATGAGTGAAAGTTGAGATTATTTATGTCAATTTTTCCTACTAACAATGCATTCCCTTTCTTCTGATTTGTTTTTCAGCAACTTTTTGAAACCAACTTGTCAATATTTTAATATCAAATTTGTTAATGGCAAAAAAATTTGGTAGATGGGTGAGAGGCTAAGAGGTATTAGGGATTTATTTAGCGCTTTGTAAATTAAAGAAATGTCTTTACATGTGCGTGGGTTGCCATTGTGAGACAAACAGTAGACTGCGCAAATGCGCATAGTTTAATTTAAAAACTTGAAGCATTTTTGAGACCTAGACTATGAAACAGTGTTTTTTCCCTGTAAAATGCACCCCTCGTCTCATCTTCCCTTTTCCTTCCATCTTCAGATTATCCCCAGTCCCCTCCTTAATCTGCCGTAACAGCCTACTCTTTTTGTCTAATGTTGGTTGCCTTACCCATCAGCAGTTCCTCTATCCGCCTAATTAAGAGCCTCTTGACAGCTTTGTTCTTTGGAGTTGCAAACTTCATCTTGTTCTTGATGGTCATGTGTGTCGGTGGTGTTTTCTTCAATCTCCATCTTTTTCTTAGCTTTAATTTGAGCCCATGCTCACTCTTGTCCCTAAAGGGGGAATGGTGTTCATGACCTGGATAGCATTTATCAATGTGATCAAATAATAAAATCAGTACTGCTAAAAATTGGTTGTTATGATTCAATTTCAAGATATGGTGAGAATCCCGTCAAAAAAATAATAATAATGGTGAGAGTGAGTTGCTGATAAGGAGATAAACGAATCGTATTTGTGGCAGACTCATACAGTCATACTTTGTGAACGAAATCACCAGTTTGAGTTTTTCACTAGTTTCAAGAATCCAGTTCTTCTATGTTAATTTTTGTGGAAATCAGAATCTTAGTGATAGCATGCATGTTACACATTTACGTATAAGAAGATTCAGAACATAGGATACCACTAATTAATTTTCCTTAAATCTTGAGATAAGGTGTCGAATTTGTTGAACACAGGATGTGCGTTCATTGATTGTTCTAGCTGACACTGTGTTTCCTTAATTGGGCAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAAGTGTGTATTTTCTTTTGCTTGTTTCACATTTGGTCTATCTTGATTTTGGCGTCTCTCCTAGTAATCTAGAACAAAGAAGGAAAGCTACTCAGTCTTATCCCTCTTGGTTCAGTGACTAAGAATGATGCTCGAGTTTTATCCGCTGATGATTTTTGCGAATGGTTTTGTTGGCAACAGTCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGGTGCGTATTATATGATTAACTTTAGATCCACTTGTATTATCTTTTGGATCTTGATTGTGGAGTTGATTCTAATCAGGTTTTCTTTCTCTATGTTGCAGTTGCATATGGCCAGGTATGCATCTCTTGTGCTTGAGTCTTGAATAAATGCTATTTATTATTATGTTCCTTGTTTCTAAAATAAAGGCAGCACATTACTTTCCAGATCAAATCTTATTTACAATGGCCATTATCTTCCATCATAATATCATGATAAAACCTATAAAACCTTAACCTTACAATAGTACTTTTTATGATAAATTTAGCGATGATAATTTCTCATCATAAATAAGTGCAATGTTTTATAAATTGATAGTAAAAGTTCTTATTTTCTTTTATTTTTTCTTGGGTGTTTGTTTTATGGTAATGGGAGGAACCCAACCCTCATTATGGTAAGTTATGTTTAGAAAATTAATTTCCATGTTTTCTGACATTGATATTTTCATGTGAAAATTTTCACCTTCCTTTTGTATGTTTGCTTGGATTTCAATGGCATTACGGTCACCTACTTTCTCATGTTTCAAAAAAAATTGGGTGATACATTTCAAGAATTTTGAAATAGGGGGATTTTGTGTGTGGGTTCAAGCCTTTGTTTCACCAAGGGGTTGTGTGACTTGTGTCTGTTGTTTCTTTCCTTTGTTAAAGAACTTCTAGTCCTAAATTACGTAAATTAATTACTCTTAAATAACTCTTTGTTGCTTCTTCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATGTGAGTTATTTTCCCTTTCCACCTAAAATGATCCTCAATATTTTGCCTCTGCTTTTCCTAATGGTATGGCCAATTCATTTTTCAGAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGTTTGATTCGAATATGAACTTCAAGTGTTTTCATTGCACCTCTCTAGATAGCTTTTTTAAGTTGTGGAGTTCGTTGTTCCTTTGCTGATTAGAGCAAGTTTTGGGTAAATCTGTGAATCTACATTGACATAAAAAAATTGGCGTGTTTTTTTCCATTCTTTATATTTATAAGCTTGTATATTAGTTATTTTCATCAGTCGATTACTCAAACTACTTTATGAAGCTAATCTGGAGTTCAAAACAGCTTAAATCTAATGTAAGAACCAGTTATTCTTTGCCATAAATTCTTTTGGCAAAGTCTGTTGATTGTCTACCAAGTTCTTCTGCACGAGTTTACAGTGAGCTGTATGCCCGTGCCCAGTAACTAGATTTCATAATTGATACTGGTAATTGTTAACCTCAAGTCTGTGCTTTGTACTAATCGCTGTTGCTACTTTTTCCTGAGTTATATTGACCTCACTCCAGATACCTGTATAGCTGTATTCTGAAAATTCTTGAATTACTTCCAAAATTATGTCTTTAAAAAATCGATCCTCTCGGAAGTTATAGCAGTTTAGCACCTGTTGAGAGTAAGCAATTTTCTTCCATCTCCTGCCTGAGTAATTTCGAGAATTTATGACAAGTTTGATTACAAAATTTTGTGTTCAGACTTCAGAAGGCAATTTTTTTGCTGTAACTTTCTAACATTTTGCTTGTTATCCTTGAAACTTCAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

mRNA sequence

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

Coding sequence (CDS)

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGA

Protein sequence

MKMMCTAEVVLTSITAVVNNLGPRQITMSNSGYLSSRTSSLFINSFLIKMSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVCGSIIRISFSQSQNT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18644.1Spo18644.1mRNA


Homology
[Close]
BLAST of Spo18644.1 vs. NCBI nr
Match: gi|902213059|gb|KNA17164.1| (hypothetical protein SOVF_082600 [Spinacia oleracea])

HSP 1 Score: 872.5 bits (2253), Expect = 3.600e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445
[Close]
BLAST of Spo18644.1 vs. NCBI nr
Match: gi|731338381|ref|XP_010680298.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 821.6 bits (2121), Expect = 7.300e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445
[Close]
BLAST of Spo18644.1 vs. NCBI nr
Match: gi|359480735|ref|XP_002277938.2| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X1 [Vitis vinifera])

HSP 1 Score: 686.0 bits (1769), Expect = 4.800e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446
[Close]
BLAST of Spo18644.1 vs. NCBI nr
Match: gi|720015939|ref|XP_010260994.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 681.8 bits (1758), Expect = 9.000e-193
Identity = 340/446 (76.23%), Postives = 404/446 (90.58%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQLVQPFG VTKLVMLR KNQALLQM D+ASA+N + Y
Sbjct: 1   MTEPSKVIHIRNVGHEISENDLLQLVQPFGVVTKLVMLRAKNQALLQMHDVASAVNALHY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQT-QGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           YTNVQP+VRGRNVY+QFSSHQELTT DQ  QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YTNVQPSVRGRNVYIQFSSHQELTTMDQNAQGRKGDQDTQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L+ELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGDAGGMY  Q  G+ AVA+ Q+GN A
Sbjct: 181 LSELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYSLQ-PGARAVAFPQMGNAA 240

Query: 290 AM-TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+  AF GGLPPG+SGTN+RCT++VSNLN DKIDEDKLFNLFS+YGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTILVSNLNSDKIDEDKLFNLFSIYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NIT + DTR+Y NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHLNITAAPDTREYLNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+D+++EEI+  +EEHG +V+TK+FE NGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDITEEEIIAHLEEHGNIVNTKLFEVNGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+++  S+IRISFSQ Q
Sbjct: 421 ATEALVCKHASTIDRSVIRISFSQLQ 445
[Close]
BLAST of Spo18644.1 vs. NCBI nr
Match: gi|702382324|ref|XP_010063840.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like [Eucalyptus grandis])

HSP 1 Score: 680.6 bits (1755), Expect = 2.000e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443
[Close]
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082600 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 2.500e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445
[Close]
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133380 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 5.100e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445
[Close]
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: F6H4C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02030 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.300e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446
[Close]
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BYT0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04205 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.400e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443
[Close]
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BT87_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02695 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.600e-188
Identity = 334/445 (75.06%), Postives = 391/445 (87.87%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN + +
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVL 169
           Y NVQP++RGRNVY+QFSSHQELTT DQ    + D   +PNRILLV+IH ++YP+TV+VL
Sbjct: 61  YANVQPSIRGRNVYVQFSSHQELTTVDQNAQARGD---EPNRILLVTIHHMLYPITVEVL 120

Query: 170 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNL 229
            QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQ A +A ++L GRN+YDGCCQLD+Q+SNL
Sbjct: 121 QQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQCAIAARTSLQGRNIYDGCCQLDIQFSNL 180

Query: 230 TELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAA 289
            ELQVN+NN+RSRDFTNPNLPSEQ+GRSSQ GYGDAG +Y  QA G+ AV + Q+ N AA
Sbjct: 181 DELQVNYNNERSRDFTNPNLPSEQKGRSSQPGYGDAGSIYALQAGGARAVPFPQMANAAA 240

Query: 290 MTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHA 349
           + A F GGLPPG+SGTN+RCTV+VSNLNPDKIDEDKLFNLFSLYGNIVRIKLLR KPDHA
Sbjct: 241 IAAAFGGGLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRNKPDHA 300

Query: 350 LVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAK 409
           LVEM DGFQAELAV+FLKGA LFGKR+EVN+SK+ +IT   DT DY NSNLNRFN NAAK
Sbjct: 301 LVEMGDGFQAELAVHFLKGAALFGKRLEVNFSKHPSITQGADTHDYMNSNLNRFNRNAAK 360

Query: 410 HYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEA 469
           +Y+YCCSPTKMIHLSS+P++V++EEIV  +EEHG +V+TK+FE NGKKQ LVLFE+EE+A
Sbjct: 361 NYRYCCSPTKMIHLSSLPQEVTEEEIVKHLEEHGPIVNTKVFEMNGKKQALVLFENEEQA 420

Query: 470 TEALVCKHATSVCGSIIRISFSQSQ 493
           TEALVCKHA+S+ GSIIRISFSQ Q
Sbjct: 421 TEALVCKHASSLAGSIIRISFSQLQ 442
[Close]
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP3_ARATH (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.100e-182
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430
[Close]
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_HUMAN (Polypyrimidine tract-binding protein 1 OS=Homo sapiens GN=PTBP1 PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.200e-73
Identity = 172/475 (36.21%), Postives = 271/475 (57.05%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK I +  SK+ N+
Sbjct: 358 FILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  VS+E++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G VV    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 529
[Close]
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_BOVIN (Polypyrimidine tract-binding protein 1 OS=Bos taurus GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.900e-72
Identity = 167/475 (35.16%), Postives = 271/475 (57.05%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK + +  SK+ ++
Sbjct: 358 FILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQSV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  +S++++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G +V    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKS 529
[Close]
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_PIG (Polypyrimidine tract-binding protein 1 OS=Sus scrofa GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.000e-71
Identity = 175/499 (35.07%), Postives = 276/499 (55.31%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR------------ 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS               
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAF 297

Query: 294 ---GRSSQSGYGDAGG----MYPFQATGS-----GAVAYGQLGNNAAMTAFPGGLP-PGV 353
              G  S S Y  AG       P  AT S     GA+A   + + AA  A  G +  PG+
Sbjct: 298 GAPGIMSASPYAGAGFPPTFAIPQAATVSVPNVHGALAPLAIPSAAARAAAAGRIAIPGL 357

Query: 354 SGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELA 413
           +G      ++VSNLNP+++    LF LF +Y ++ R+K+L  K ++ALV+M+DG QA+LA
Sbjct: 358 AGAGNS-VLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNKKENALVQMADGSQAQLA 417

Query: 414 VNFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCC 473
           ++ L G  L GK + +  SK+ N+    +       T+DY NS L+RF    +K+++   
Sbjct: 418 MSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF 477

Query: 474 SPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVC 492
            P+  +HLS++P  +S+E++  L   +G +V    F    +K  L+   S EEA +AL+ 
Sbjct: 478 PPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALID 537
[Close]
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_RAT (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus GN=Ptbp1 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.100e-71
Identity = 171/498 (34.34%), Postives = 276/498 (55.42%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIHVR +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 57  SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTSV 116

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 117 APVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 176

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 177 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 236

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR----GRSSQSGY 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS        ++  + +
Sbjct: 237 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 296

Query: 294 GDAGGMYPFQATGS-------------------GAVAYGQLGNNAAMTAFPGGLP-PGVS 353
           G  G M      G+                   GA+A   + + AA  A  G +  PG++
Sbjct: 297 GAPGIMSASPYAGAVPSHLCHPSRAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLA 356

Query: 354 GTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAV 413
           G      ++VSNLNP+++    LF LF +YG++ R+K+L  K ++ALVEM+DG QA+LA+
Sbjct: 357 GAGNS-VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVEMADGSQAQLAM 416

Query: 414 NFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCS 473
           + L G  L GK + +  SK+ ++    +       T+DY +S L+RF    +K+++    
Sbjct: 417 SHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFP 476

Query: 474 PTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCK 492
           P+  +HLS++P  VS++++  L   +G VV    F    +K  L+   S EEA +AL+  
Sbjct: 477 PSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIEL 536
[Close]
BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3)

HSP 1 Score: 641.0 bits (1652), Expect = 6.200e-184
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1 

		  

Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430
[Close]
BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2)

HSP 1 Score: 146.0 bits (367), Expect = 6.300e-35
Identity = 115/363 (31.68%), Postives = 187/363 (51.52%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E TE +L++L +PFG+V  TK  +   +NQA ++ +D+  AI ++ YY 
Sbjct: 17  SKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYYA 76

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPM-TVDVL 173
           +      VRG+ VY+Q+S+ QE+  ++T    +D  G    +LLV+I      M ++DVL
Sbjct: 77  SSSEPAQVRGKTVYLQYSNRQEIVNNKTT---ADVVGN---VLLVTIEGDDARMVSIDVL 136

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AGYQAL+QF   ++A +A  AL GR++         G C L
Sbjct: 137 HLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSL 196

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYG 293
            + YS  T+L V F + RSRD+TNP LP                 + P     +G VA G
Sbjct: 197 KITYSAHTDLTVKFQSHRSRDYTNPYLP-----------------VAPSAIDSTGQVAVG 256

Query: 294 QLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLL- 353
             G    M      L   +       T+            D L  +F+ +G + +I +  
Sbjct: 257 VDGKK--MEPESNVLLASIENMQYAVTL------------DVLHMVFAAFGEVQKIAMFD 316

Query: 354 RGKPDHALVEMSDGFQAELAVNFLKGALLFGK---RIEVNYSKYSNITPSTD---TRDYQ 398
           +     AL++ SD   A +A   L+G  ++     ++ + YS++++++   +   +RDY 
Sbjct: 317 KNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 342
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BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1)

HSP 1 Score: 141.4 bits (355), Expect = 1.500e-33
Identity = 81/211 (38.39%), Postives = 130/211 (61.61%), Query Frame = 1 

		  

Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E  E +L+ L + FG +  TK  +   +NQA ++  D+  AI++V YY 
Sbjct: 16  SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAISMVSYYA 75

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQV-IYPMTVDVL 173
           +      +RG+ VY+Q+S+  E+  +Q+ G        P  +LLV+   V  + +++DV+
Sbjct: 76  SSSEPAQIRGKTVYIQYSNRHEIVNNQSPG------DVPGNVLLVTFEGVESHEVSIDVI 135

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AG+QAL+QF   ++A++A SAL GR++       + G C L
Sbjct: 136 HLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSL 195

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQ 253
            + YS  T+L + F + RSRD+TNP LP  Q
Sbjct: 196 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQ 220
The following BLAST results are available for this feature:
BLAST of Spo18644.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902213059|gb|KNA17164.1|3.6e-25099.7hypothetical protein SOVF_0826... [more]
gi|731338381|ref|XP_010680298.1|7.3e-23592.3PREDICTED: polypyrimidine trac... [more]
gi|359480735|ref|XP_002277938.2|4.8e-19476.4PREDICTED: polypyrimidine trac... [more]
gi|720015939|ref|XP_010260994.1|9.0e-19376.2PREDICTED: polypyrimidine trac... [more]
gi|702382324|ref|XP_010063840.1|2.0e-19276.5PREDICTED: polypyrimidine trac... [more]
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BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RDV7_SPIOL2.5e-25099.7Uncharacterized protein OS=Spi... [more]
A0A0J8CB36_BETVU5.1e-23592.3Uncharacterized protein OS=Bet... [more]
F6H4C6_VITVI3.3e-19476.4Putative uncharacterized prote... [more]
A0A059BYT0_EUCGR1.4e-19276.5Uncharacterized protein OS=Euc... [more]
A0A059BT87_EUCGR1.6e-18875.0Uncharacterized protein OS=Euc... [more]
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BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PTBP3_ARATH1.1e-18271.9Polypyrimidine tract-binding p... [more]
PTBP1_HUMAN4.2e-7336.2Polypyrimidine tract-binding p... [more]
PTBP1_BOVIN7.9e-7235.1Polypyrimidine tract-binding p... [more]
PTBP1_PIG3.0e-7135.0Polypyrimidine tract-binding p... [more]
PTBP1_RAT5.1e-7134.3Polypyrimidine tract-binding p... [more]
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BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G43190.16.2e-18471.9polypyrimidine tract-binding p... [more]
AT5G53180.16.3e-3531.6polypyrimidine tract-binding p... [more]
AT3G01150.11.5e-3338.3polypyrimidine tract-binding p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 58..108
score: 1.5E-4coord: 422..484
score: 6.7E-7coord: 161..215
score: 6.
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 56..125
score: 7.5E-6coord: 308..377
score: 3.1E-13coord: 418..487
score: 1.4E-7coord: 153..222
score:
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 417..491
score: 11.179coord: 307..381
score: 13.089coord: 149..228
score: 9.183coord: 55..129
score: 9
IPR006536HnRNP-L/PTBTIGRFAMsTIGR01649TIGR01649coord: 54..492
score: 6.0E
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 304..401
score: 3.9E-23coord: 154..249
score: 9.6E-28coord: 52..138
score: 1.6E-21coord: 406..492
score: 3.5
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 152..249
score: 6.38E-17coord: 51..139
score: 1.33E-17coord: 306..492
score: 4.26
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 151..376
score: 3.1E-71coord: 54..135
score: 3.1
NoneNo IPR availablePFAMPF13893RRM_5coord: 309..385
score: 2.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0009987 cellular process
biological_process GO:0006893 Golgi to plasma membrane transport
biological_process GO:0006486 protein glycosylation
biological_process GO:0048608 reproductive structure development
biological_process GO:0022414 reproductive process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0009791 post-embryonic development
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0050826 response to freezing
biological_process GO:0009909 regulation of flower development
biological_process GO:0045694 regulation of embryo sac egg cell differentiation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0016579 protein deubiquitination
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0043484 regulation of RNA splicing
biological_process GO:0045010 actin nucleation
biological_process GO:0007155 cell adhesion
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0006996 organelle organization
biological_process GO:0034654 nucleobase-containing compound biosynthetic process
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0006260 DNA replication
biological_process GO:0006281 DNA repair
biological_process GO:0006310 DNA recombination
biological_process GO:0071555 cell wall organization
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0048589 developmental growth
biological_process GO:0048449 floral organ formation
biological_process GO:0010014 meristem initiation
biological_process GO:0007018 microtubule-based movement
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0008152 metabolic process
biological_process GO:0003002 regionalization
biological_process GO:0000338 protein deneddylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0010048 vernalization response
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0016070 RNA metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006769 nicotinamide metabolic process
biological_process GO:0006312 mitotic recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0009630 gravitropism
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process GO:0006886 intracellular protein transport
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0051571 positive regulation of histone H3-K4 methylation
biological_process GO:0006342 chromatin silencing
biological_process GO:0009933 meristem structural organization
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0019915 lipid storage
biological_process GO:0000741 karyogamy
biological_process GO:0016571 histone methylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0006306 DNA methylation
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0016572 histone phosphorylation
biological_process GO:0061087 positive regulation of histone H3-K27 methylation
biological_process GO:0080090 regulation of primary metabolic process
cellular_component GO:0031209 SCAR complex
cellular_component GO:0000145 exocyst
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005677 chromatin silencing complex
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005663 DNA replication factor C complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0012505 endomembrane system
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0016020 membrane
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0005871 kinesin complex
cellular_component GO:0045298 tubulin complex
cellular_component GO:0000932 P-body
cellular_component GO:0005634 nucleus
cellular_component GO:0042575 DNA polymerase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity
molecular_function GO:0004143 diacylglycerol kinase activity
molecular_function GO:0005488 binding
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008378 galactosyltransferase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0003689 DNA clamp loader activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0003951 NAD+ kinase activity
RNA-Seq Expression