Spo18703 (gene) | SpinachBase

Overview


Name	Spo18703
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	ARM repeat superfamily protein isoform 1
Location	SpoScf_00817 : 22983 .. 29340 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTCTGCAACTCCCAAACCTCCCAAACCCTAGAAATTCAATGAAGAACCCTAACAAATTTCGAAGATCTGGATTCCTCATCGTGGAAAAACAATGATGCAGACGCACAAAGTACGGATTGCAAATTAGAGTTCCAAATCAAGACGGCATGTCGATTCTCGCAGCGGAGATGGCAACAGAGGGCTTCTCCTCTGCCGGGCTCTCATCCGACAAATTAACCCTCCAAACCCTACAATAAAAAATGAAATGCTATCCATAAATCTATGAATCCGAATTGCAGTATCTTTACAAATAATTCAAATCCTTACTCAAGATTTTCGCGGATCAAGCGGCTCTCAGCTTCAATTCAGTTAGCGGCAATTCCCCTGACACTTCTGTCACCAAAGACCTCGGTGATAAGGCCATGTTCTTGGCTCACATGACTCCGTTTTACCCTAAGGAGCTCGCCGGTCTTCTTCGAACTTCCGGGAAGTCATTGTAAGTTCCCTTACAAACACTGATTTTATATTCTGAATTTTTGCTATTTTTTTCCAGATTTTGTTAAATAGGAGTATTCAACTGCAATTTTGAATTTTGCTCAAGAATTTTGTGGGTTCTTTAATCCGAAATTGAGGTTCTTTAATCCCAAATTCGTATCCGAAATCTGTGAATTTATGAGCGTTGAACTTTGTAATTCTGAGAATTCTGGATGAAAATTCTGTTTATTGAGGTTAATTCATTGAACATGGATGTTAATTTCTTTGAGTAGTTTTTCACTTCGGAATTTGTTTGTGCCAGAAATGTGGTGTTTTTTGGATGCATATTAGGCATGTGAAGTATGGTTGANCTTTGTAATTCTGAGAATTCTGGATGAAAATTCTGTTTATTGAGGTTAATTCATTGAACATGGATGTTAATTTCTTTGAGTAGTTTTTCACTGCGGAATTTGTTTGTGCCAGAAATGTGGTGTTTTTTGGATGCATATTAGGCATGTGAAGTATGGTTGACGGAATTTGTTTGTGCCAGAAATGTGGTGTTTTTTGGATGCATATTAGGCATGTGAAGTATGGTTGATTAATTTTGCAACTCATTATCAATGCGAGTTTTGTAAGTTGGAGCATGATTTATTGATTTATATTTGTTGACTATTTTTTTGCTTCGAGTTTTGAATTAGGAGTTCTATGCTTATTTGTTGATANTTTGTTGACTATTTTTTTGCTTCGAGTTTTGAATTAGGAGTTCTATGCTTATTTGTTGATATAGTTTTTCTCTGGGAAATTTGGGTATGTTCTTAATTCAGAGTTGTTTGTGGGTGATGGGTTTTCTTTTGATAATTTGGAGATAGATGTGTGTCAATCTTGCAATCTAAATAGATGATTATGTTCTTCCGATCATGTACCTAACACTATTAGCTTTTGTTGTTATTTCTGGATAAATTCAAAATTTGAGAGTAACTGTTCTCATCAATTTTGCGATTGAGGTTTCCGGATTGTGACGAGAAACCATTTTGACGAGTGAGTTGTTATTTTTGGTATAGAGGCATAGAGCATCACCTACTTAGTTGTGTTGATAACATGAGTTTTGTTCTTCTATTTTGATACTTTTTAATTTTGGGAGTGTATGATTTTGCTCAACGCGACACATATTTCTTTCCAACTCCATAACTATGTTGTTTTCATAAGTATAACTGTGCTTATGACGCGGTGACTTGAGTGACAGGTCCATTAATTAATTTTTTTGTAAAAGAAATTGGTTCACAGAAATTTTTGCTTGACTAAAGCTTTCTCTTTGATGGTCTGAGTTCTGTTGGTGATCCTCTTCACTATTTCATTTGGTACAGAAAACACAATCCCTTCCCTACCAGAAATGCATTGTTTATTCTTCTTCCCACTATTTACATCACTACATATGTGACTCAAAAATTAATAATTTAGCATTTATTAAAAGTATCTAATACATCATTGTGAGTCTTACCAGGTTTAGTACTTTCAAAAGAATTTGTAACTGAAGCAAAGCCAGATCGGCGTAGCAGCCTCAATGACTGCAAATTAGAGGGTTGTCCATGTGTTAACAGAATCTGTCAGTGTCATAAAACCATGGTGGAAGAAGAAGCTTATTCAAAGATACCAACTCAACTAACTGACAAGGCCAGACTTCAATGTTCTGGAGACTGTAAATGCAAAAAACCCGAAGTTGAAGCATTCTATCAAACCCTAGATTACACGCGTCCAGTCGCTGTCTTCGCATCTTCTCCTTCCCGCTGCTCTTCTCCATCTCCGCGATCCCCATTTCCCTCAATTGTCTGGATCTGACTTCGGAGACTCCTTATACAAGTATGAATTTATGCATCTTTTTTTGTTAATCCAATTTCAAAATTTTCATATAATACTTCAATTGATCGATTTCAATTGATTTTGGATTAAATTTCATTAATTAGCAATACATAAATTCNTTCAATTGATCGATTTCAATTGATTTTGGATTAAATTTCATTAATTAGCAATACATAAATTCAATCTCAATTTATTACCTTAAATTTTAATTACATTGTAATGAGTTTTAGCTATTTAAGATTTTGATGATTACATTGATGGGGTTTAACATGTCAGCTCTTCGCAACTTCAATGGGTTAACTTTATTTCAAATAAATTTGATATTCGCATCTATATGGCATTTTTGTCTTGAGTTCGGATGATAATTGGTTAACTTGAAATTGTGCTCCTTTTCTTACTGTGAAATACTCGATGACAAAATTCCCTTTTAAGTGAAAGGATGAAGTCCTCCATAATTGTAGGGATGTTCTGTAAGGGAAGTAGAATCAGTTAATCAAGGGCTTAAGTTCAGCTTGATTCAAGCTTTAACCAATTTTGACAGTTAAATAAAAGAAGCTCAAGTTGTCCAGTCTCATTAGGTTCCAGTTAGCATGGCTTAGCCATATGCAAATATTGGTTTTATTCACGATATATTATTATCATGTTTTGAAAGTATTATGTTAAACAGACTGGAGTGTTGTTGGTTTGGTGGGTATTGCAGTCCGTCTGTGGATTTCTATGTGCCTGTAGGAAGTTGTAGCTGCGTGTTTTTAAAACTGCAGTCAGTCTGGTGGTGTTTTTGCTGTGAAAGCAGTGGAACTGCGTAGCTGCGTGTTTTTAAAACTGCAGTCAGTCTGGTGGTGTTTTTGCTGTGAAAGCAGTGGAACTGCTTTCTGCTATAATTCAATTAGATGGTCGGTGCAGTTGGATAGCTTCTAGCTGTTTTTTTTCATGTTCTTTTTGGTTAGCTTGCCATTTTGTTTTGCTGGTGCAGCCATGTTGGGATACGTGTATTTTTTTTAGGCATGCTTAACCTGGCATGCCTAACTTCATCACCCAACTTTATTAGGTCACCTATTTTCTTTGTTGTTTTTGCTCAATTTTATTATGCAATTCATGAAATTTTCAGGTCACCCCGACTTCACTGACCAACTCAACTGAGTCATTGAATTGGAGCTCCGTAGTCTAGGGTTTATCGACGGTTCTCAAGTTTACGACGCTGTTAATAGCCTTCTAGATGATTATGAAATTCATGAAATTCGCTAATGTGTTTTCTCCTTGCTATTATCATAGTCTATCAGTTCTAGGTTTAAGCATGAAATTCTCATATGACGAAACAATCATATAGATTAGTTTACGATGATGGTGATGTTGGTTACAAAACAATCAATATTTCATATATGTTGGTTCACGATGGTGATGTTGGTTTACGAAGCAATTAATGAATATTTCATGTTTTAAGATCTTATGTGATGTGGGTTTATGATGACGAAACAATCATATACTCTCATATGATAGAAACATAACCAACCTATTTATTTTGCAATTCCTTCAATACAAAAATACCCTGATCTCTTTATCAATTTTCAGGTGTGCTTTGGCTCTTTGGTTGGTGTCGTTGATCGAGCATTGGGAGAGCATCAACGCAGTCTTCAACTCCTCAGGCATGTATAAAACACTGGAATAGGGTTTATTTGTGGGTCACTAATGTTTTAAATTGCTGATTTGATTGCAAAGGCAAAAGAAGGAGGTGTATGTGATTGCTGATTTCTGGTGTTGTTGTTTTTATGTATGGCTTGAGTTCATGAATGTATCCTAATTGTTATTTTGAATTTTTATGTAACAGTTGATGGATTGAAGGTTTTTAAGGTGTACACAAATGGATCATAGATGATGTGGCTCTAAGAGTTTCATGTACATGTCTTATGTCAGTTTATCAGGAGGGCAAATAAAATTTGGTGGCACAGTCAAGCAGGAGCTTCTCATATTGTGTAAACATACATTTGCCTTAGAAAAATAAATGGCTAACTCAATTTTGATGTAGATGTGCAATACCACACACTATGACTTTTCTTGGCTCATCTCGTGCACCGCCTGTTGGGACAAGAAGCATGCGATAAAATGCAAACTACTCAACTTTTATGATGCAAAATTTGAACTGTTTTACTTATTATTACTTTTTAGTACTGAATTTGAGTAAATTGTGTTCATTTCTTATTTTAAAGAAAATCGCCTTAAGTTATGTAATTTGATATGGTTTGTGACAATATTTCCATCTATTATTTTAGTTTGTGTATAATTTGGCACGCATCGCGTGCATATAAGACTAGTATTAAAGGACGGAGGAATTATTTGGCTACCTCTATGCGTTAAAGGCCCTAACGTCCGGAAATACGCTTACCACTGAAAATTGCAGAAAAAGAAATTAAAGTTTTGTAGGATTTCCTTGAATCTGAGCCAGTAGAAATTCACTCAACCAATAACTGGATAAAAATAATATTTGTGGATAAGATTTCTTATTGCATCTCATTTTTCCAAATAATCAAAGTATAATTTCACGAACATGGTCTCATATTTCCCTTTAGTTGCTCTGCTACCACGCATCTTCTCTCTTTCTCTCTCCTCCCCAGTAATCTTTCACCCTTCAAAAACCCCAATTAAGGTACTGCATTCAGCTCAATTTTCCTTAAACCCACAATTTTTTGTTATTATTTCATGCTTTAATTCTGTTTTTTCCTGTTTCTCTTGCACATTTTTCTGCTGTTTGCTTGATTCTGTTTTGTGATTCTTCAGTTTATTTGAGTTTGTCGAAGTGATCAGTATAAAATCCATTAGCTTTAATTTCATTATGTTCTGTTACAAGATGGAAAATTGATCATTCTTGTCCAATTTATCAATGATATTGGGATTTTGACCACTAAAATTTTGAGATTGTGAACATGTTTGGGTTTCTATAACTCCCATTTTCGGGGATTAATAATAGTCCCATTTACTATTTTAAGATGTTCGGAGAAAAGTTGACGTTTTGACTAAATTTCCAATACAGACTTTTAAACCGGAAATGGATATAGATTATTAAACTGTGGTGAGGAGTGTGTTTCTTTTCCACCTGAAATTGTGTCATAAATAGATTGTGACAATGTGACTAATGATTCCGGTAGAGGAAGTAGAATTGAATTCTTGGTTATGCTAAGATTGCTAACACATTTATAGTGACTGGAAATAATCTCTTCTTAGGTTCTTAGCAATTGTTTTTTTTTTATCATGTTGACCAGTTTGAGACCATTTTTCTGCATTTGTTATAGCTGCTCAATGCTTGTAAGATGTTAAGATTAGTTTGATATGGGTCAGCGAATTGCAACGTGTATGCCTTTCTCTTGCATTAGTAGCTTAAGATTTACTTGGTGCGTATTAGGACCATGATTTTACTTGGTGGATAGTTGCCCAGTGGCCTGAGTATGAACTACTTCGTAAGTCCGTATGAAGTATTTCTCGTTGATCACCTAAAATTCAAACCAATATGATTAATAGCTAAGAAAGGGTAGTCTGTTACAAGGAGAAAGGATATTATCTTGATGTCTCCTCTTCAGTATTTGACAGATTGAATCCTTTTTGACACGGAGGATGTTCTTCTAGATCTATAGCCTCGCCTGTAGCCTGAGAGTATATTAGTGCTAACTGTAAACTTCATGTGACACGTATGAGCTCTGGCATGAAGTTGCTGAAAATCTTATGCTTAATCTGAAAAGTCAAGATTTCAAGAAGAAGATTCGATCAAGGCCATTCCTTTTTTTTTTCCAAGACAACACTTAATGGGGATTTTATATTTCACTTTTGTTTCTGCTTCTCTGATATTCAGTTTCTTCACAGCCCATACTGACCCTTAACCAATCCTGTGATCAAAATTTTAATACTCAGAAACATTGTAACACACTGATGATTGCACCATCTTTTGTCTAGGGTCTCAATGGAGGCAGCTCGTTGACTCTCCTCCTATTTATGGCTTATGATTTCTTCACAACCCCCAATAGTATATGTCCTGGGTGTACAAATGTTGGTTAA

mRNA sequence

ATGATTTTCGCGGATCAAGCGGCTCTCAGCTTCAATTCAGTTAGCGGCAATTCCCCTGACACTTCTGTCACCAAAGACCTCGGTGATAAGGCCATGTTCTTGGCTCACATGACTCCGTTTTACCCTAAGGAGCTCGCCGGTCTTCTTCGAACTTCCGGGAAGTCATTGTTTAGTACTTTCAAAAGAATTTTTGCTCTGCTACCACGCATCTTCTCTCTTTCTCTCTCCTCCCCAGTAATCTTTCACCCTTCAAAAACCCCAATTAAGGGTCTCAATGGAGGCAGCTCGTTGACTCTCCTCCTATTTATGGCTTATGATTTCTTCACAACCCCCAATAGTATATGTCCTGGGTGTACAAATGTTGGTTAA

Coding sequence (CDS)

ATGATTTTCGCGGATCAAGCGGCTCTCAGCTTCAATTCAGTTAGCGGCAATTCCCCTGACACTTCTGTCACCAAAGACCTCGGTGATAAGGCCATGTTCTTGGCTCACATGACTCCGTTTTACCCTAAGGAGCTCGCCGGTCTTCTTCGAACTTCCGGGAAGTCATTGTTTAGTACTTTCAAAAGAATTTTTGCTCTGCTACCACGCATCTTCTCTCTTTCTCTCTCCTCCCCAGTAATCTTTCACCCTTCAAAAACCCCAATTAAGGGTCTCAATGGAGGCAGCTCGTTGACTCTCCTCCTATTTATGGCTTATGATTTCTTCACAACCCCCAATAGTATATGTCCTGGGTGTACAAATGTTGGTTAA

Protein sequence

MIFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFYPKELAGLLRTSGKSLFSTFKRIFALLPRIFSLSLSSPVIFHPSKTPIKGLNGGSSLTLLLFMAYDFFTTPNSICPGCTNVG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18703.1	Spo18703.1	mRNA

Homology

[Close]

BLAST of Spo18703.1 vs. NCBI nr
Match: gi|902234662|gb|KNA23538.1| (hypothetical protein SOVF_024060 [Spinacia oleracea])

HSP 1 Score: 95.9 bits (237), Expect = 5.200e-17
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPF-------YPKELAGLLRTSGK 61
           +F DQAALSFNSVSG +PDTS+ KDLGDKAMFLAHMTPF       YPKELAGLLRTSGK
Sbjct: 62  LFEDQAALSFNSVSGIAPDTSIAKDLGDKAMFLAHMTPFYPKYLSLYPKELAGLLRTSGK 121

[Close]

BLAST of Spo18703.1 vs. NCBI nr
Match: gi|565366203|ref|XP_006349783.1| (PREDICTED: protein SDA1 homolog [Solanum tuberosum])

HSP 1 Score: 70.5 bits (171), Expect = 2.300e-9
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFY-------PKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPFY       PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. NCBI nr
Match: gi|567152225|ref|XP_006417149.1| (hypothetical protein EUTSA_v10006828mg [Eutrema salsugineum])

HSP 1 Score: 70.1 bits (170), Expect = 3.100e-9
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFYPKELAG-------LLRTS 53
           +F  QAALSF+SV G   D SV KDLGD+AMFLAH+TPFYPK+LA        LLRTS
Sbjct: 55  LFQQQAALSFSSVGGIGSDPSVAKDLGDRAMFLAHVTPFYPKQLAAFPAQLTDLLRTS 112

[Close]

BLAST of Spo18703.1 vs. NCBI nr
Match: gi|970068676|ref|XP_015061474.1| (PREDICTED: protein SDA1 homolog [Solanum pennellii])

HSP 1 Score: 68.9 bits (167), Expect = 6.800e-9
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPF-------YPKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPF       +PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFFPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. NCBI nr
Match: gi|460415063|ref|XP_004252880.1| (PREDICTED: protein SDA1 homolog [Solanum lycopersicum])

HSP 1 Score: 68.9 bits (167), Expect = 6.800e-9
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPF-------YPKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPF       +PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFFPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVP9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024060 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.600e-17
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPF-------YPKELAGLLRTSGK 61
           +F DQAALSFNSVSG +PDTS+ KDLGDKAMFLAHMTPF       YPKELAGLLRTSGK
Sbjct: 62  LFEDQAALSFNSVSGIAPDTSIAKDLGDKAMFLAHMTPFYPKYLSLYPKELAGLLRTSGK 121

[Close]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IS19_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-9
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFY-------PKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPFY       PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Match: M1A0L8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004723 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-9
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFY-------PKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPFY       PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Match: M1A0M1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004723 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-9
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFY-------PKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPFY       PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Match: M1A0M0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004723 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-9
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFY-------PKELAGLLRTSGK 57
           +F  QAAL+F S+SG S D +V+KDLGD+AMFL+H+TPFY       PKELA LLR+S +
Sbjct: 61  LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR 120

[Close]

BLAST of Spo18703.1 vs. TAIR (Arabidopsis)
Match: AT1G13160.1 (ARM repeat superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.400e-12
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 1


		  
Query: 2   IFADQAALSFNSVSGNSPDTSVTKDLGDKAMFLAHMTPFYPKELA-------GLLRTS 53
           +F + AALSF+S  G   D SV+KDLGD+AMFLAH+TPFYPK+LA       GLLRTS
Sbjct: 55  LFHELAALSFSSTGGIGSDPSVSKDLGDRAMFLAHVTPFYPKQLAAFPAQLTGLLRTS 112

The following BLAST results are available for this feature:

BLAST of Spo18703.1 vs. NCBI nr
BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
BLAST of Spo18703.1 vs. ExPASy Swiss-Prot
BLAST of Spo18703.1 vs. TAIR (Arabidopsis)

BLAST of Spo18703.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902234662\|gb\|KNA23538.1\|	5.2e-17	74.6	hypothetical protein SOVF_0240...	[more]
gi\|565366203\|ref\|XP_006349783.1\|	2.3e-9	58.0	PREDICTED: protein SDA1 homolo...	[more]
gi\|567152225\|ref\|XP_006417149.1\|	3.1e-9	63.7	hypothetical protein EUTSA_v10...	[more]
gi\|970068676\|ref\|XP_015061474.1\|	6.8e-9	56.4	PREDICTED: protein SDA1 homolo...	[more]
gi\|460415063\|ref\|XP_004252880.1\|	6.8e-9	56.4	PREDICTED: protein SDA1 homolo...	[more]

BLAST of Spo18703.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RVP9_SPIOL	3.6e-17	74.6	Uncharacterized protein OS=Spi...	[more]
A0A0V0IS19_SOLCH	1.6e-9	58.0	Uncharacterized protein OS=Sol...	[more]
M1A0L8_SOLTU	1.6e-9	58.0	Uncharacterized protein OS=Sol...	[more]
M1A0M1_SOLTU	1.6e-9	58.0	Uncharacterized protein OS=Sol...	[more]
M1A0M0_SOLTU	1.6e-9	58.0	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo18703.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo18703.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G13160.1	2.4e-12	62.0	ARM repeat superfamily protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006508	proteolysis
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0009637	response to blue light
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005524	ATP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25648	0.75	Barchart \| Table
Spo04391	0.72	Barchart \| Table
Spo16620	0.70	Barchart \| Table
Spo02833	0.70	Barchart \| Table
Spo11201	0.69	Barchart \| Table
Spo07301	0.69	Barchart \| Table
Spo07109	0.69	Barchart \| Table
Spo05898	0.69	Barchart \| Table
Spo12889	0.68	Barchart \| Table
Spo15990	0.68	Barchart \| Table
Spo15293	0.68	Barchart \| Table
Spo09412	0.68	Barchart \| Table
Spo23993	0.68	Barchart \| Table
Spo01117	0.67	Barchart \| Table
Spo03551	0.67	Barchart \| Table
Spo21247	0.67	Barchart \| Table
Spo22911	0.67	Barchart \| Table
Spo25444	0.67	Barchart \| Table
Spo14923	0.66	Barchart \| Table
Spo20043	0.66	Barchart \| Table
Spo20791	0.66	Barchart \| Table
Spo21484	0.66	Barchart \| Table
Spo21749	0.66	Barchart \| Table
Spo15707	0.66	Barchart \| Table
Spo19461	0.66	Barchart \| Table
Spo07237	0.65	Barchart \| Table
Spo12296	0.65	Barchart \| Table
Spo25262	0.65	Barchart \| Table
Spo21361	0.65	Barchart \| Table
Spo24490	0.65	Barchart \| Table
Spo15032	0.65	Barchart \| Table