Spo18862 (gene) | SpinachBase

Overview


Name	Spo18862
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	DUF1499 family protein
Location	chr2 : 47876360 .. 47878719 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAAGTCTAAACACATATGGAGTAAGCTTTTTTTTTTCTTTTCAATTAGGCCTAATCAACATCTCCTTGGCCCAAGGAACCTTGGGGCCTCTATTTTCACCCAACAAGACAACCCATACTCCAAACCACTCATTAGCATTAAAAAAAAAATAAAAAAAAATTACTCCAAACCACTCAACACACACTTTTCAAAAGTCAAACATTCCTCCCAAGATTGGAGCTTGAAGCTTGTAATAATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGGTTGTTTTTTCTCAATACCATTTTCCTTAATTATATGCTCAATAAGTATTTGTTGCTAATTTGATTTAAATTCTAATTTTAATCTGAATTGAACAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGTAAGTTCAATTTGTTTGTTTCCATCATTTTCCAATTTTCAATTAGTTACTCAGTCACTACTGTAGGTTAGACAATTAGGCACTTAGGCACTTAGGCTAGCTTTGCTTGTTATTTACGGAGTAGTTAGTTACTCCCTCCTTAGTAGTTACTAGTTAGTACGACTTGAATTAGTTGTCATATTGATGTTATAACTTGGACTAATTATGTGACAACTAAATTTGAACGGAGGTGGTAATTCGAAAATGTATTTTCCACCCGTTTGTTATCCCCGTGAGGTTCGTTACATGTAGAATTTAATTAAGTTGTCATTTAGTTAATGGTAGGAACTCTAGGAAGTAAGGACTACTACATAATTTTTTAGGAAAGAATTTTTTTTCCATGTGTAAACATTTTATAGGAAGTACGAAATGTTGTTTGATTAAGTTGAATATGGGAAGTTTTATCAAAAAAAAAAAAAAAAAAGTTGAATATGGGAAGTAACTTCCTAGTGGGACTTAGGTAGGCCGTAGGCAGTGACTTCCCATGTTTTTGTAGACCAAACAATACCAATATACCACAATGTTCTACTTCCTAGAAAGTTTTAATTTTCACGATTTTTTAATGTCAACCAAAAAACACCTAAAAGTATTTATCTCCATTGGGGTAGAAATGTCATAAGATTTGAGAAGGTGAATTTGGAGATTTTGTTGGTTAATTAAGACATCCAAATGTTTGTTTCAATATCAAAAGGTTTCTGATTTTAGACTAGATAAAGATGGTCCATGCTAATGGGATTTGTTATAATTGCACCTGGCAGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTGTAAGGTTTCCTTACAAAACAGTCCATTAAAATTACTGGCGTTTTCGTGGTAAATTAACGCGTAATCAATGCATTTGCAGATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGGTAAGTTATTAGCACAAAAATGTACAAGTACTGCTTGATAGAAGCATTGGTACAACTATTGACTTGCAGAACATGTGCTTTCATTTGTGTAGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGTGAGAAGGGGTGTCATTATGTAGTCAGTTTCAGATTCCATGTTAGTTTTGGTTTAGATTATCTTGTATATATTCTCTTCAGAATGGTTCCTGACGAGTGGTTATTGATGCAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAATTATAGTTCATGAAGTCTCATTGTAAGTAGGAGATTCCGTTATTCCCATAGTTTCCAATCCATTTCCTCCTACAAATGAACAATTATTATAGAACAAGAAATGCCAAAGTGGATTCTAACTATTGAAAAGACTTAGCCAAAGAGGTGAAAACATATTTGTTTGTACACCATCTTCTGGATTTGAATGTACTGCTTGCTTCTGAAGAAAGAATACTTCCAAGTTGAATCTTCCG

mRNA sequence

TCTAAAGTCTAAACACATATGGAGTAAGCTTTTTTTTTTCTTTTCAATTAGGCCTAATCAACATCTCCTTGGCCCAAGGAACCTTGGGGCCTCTATTTTCACCCAACAAGACAACCCATACTCCAAACCACTCATTAGCATTAAAAAAAAAATAAAAAAAAATTACTCCAAACCACTCAACACACACTTTTCAAAAGTCAAACATTCCTCCCAAGATTGGAGCTTGAAGCTTGTAATAATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAATTATAGTTCATGAAGTCTCATTGTAAGTAGGAGATTCCGTTATTCCCATAGTTTCCAATCCATTTCCTCCTACAAATGAACAATTATTATAGAACAAGAAATGCCAAAGTGGATTCTAACTATTGAAAAGACTTAGCCAAAGAGGTGAAAACATATTTGTTTGTACACCATCTTCTGGATTTGAATGTACTGCTTGCTTCTGAAGAAAGAATACTTCCAAGTTGAATCTTCCG

Coding sequence (CDS)

ATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAA

Protein sequence

MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18862.1	Spo18862.1	mRNA

Homology

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BLAST of Spo18862.1 vs. NCBI nr
Match: gi|902231493|gb|KNA22274.1| (hypothetical protein SOVF_035180 [Spinacia oleracea])

HSP 1 Score: 472.6 bits (1215), Expect = 3.900e-130
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60
           MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI
Sbjct: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60

Query: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120
           NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY
Sbjct: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120

Query: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180
           APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM
Sbjct: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180

Query: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY
Sbjct: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 236

[Close]

BLAST of Spo18862.1 vs. NCBI nr
Match: gi|731361270|ref|XP_010692264.1| (PREDICTED: uncharacterized protein LOC104905415 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.500e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 25  MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 84

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 85  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 144

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 145 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 204

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 205 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 246

[Close]

BLAST of Spo18862.1 vs. NCBI nr
Match: gi|870847755|gb|KMT00103.1| (hypothetical protein BVRB_1g019270 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.500e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 1   MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 60

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 61  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 120

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 121 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 180

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 181 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 222

[Close]

BLAST of Spo18862.1 vs. NCBI nr
Match: gi|661878472|emb|CDP17774.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 308.5 bits (789), Expect = 9.900e-81
Identity = 155/204 (75.98%), Postives = 174/204 (85.29%), Query Frame = 1

		  
Query: 30  RIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYL 89
           RII  +Q QPQ Q      + Q QN+   Q  RRE++LRSSELA + AIFHFSGTKP+YL
Sbjct: 30  RIIRAEQLQPQPQP-----QPQPQNQ---QAGRREIVLRSSELAVLGAIFHFSGTKPNYL 89

Query: 90  GVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLA 149
           G+QKNPPSLALCPAT NC+STSE++SD  HYAPPWNYNPE+GRGS NPVSREVAMQELL 
Sbjct: 90  GIQKNPPSLALCPATNNCVSTSENTSDLTHYAPPWNYNPEEGRGSTNPVSREVAMQELLE 149

Query: 150 VIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSF 209
            I+STKPD F P+ +E++DDYVRVEYESPIMGFVDDVEFWFPPGKKS+VQYRSASRLG+F
Sbjct: 150 AIKSTKPDNFNPRIVEQKDDYVRVEYESPIMGFVDDVEFWFPPGKKSLVQYRSASRLGNF 209

Query: 210 DFDVNRKRIKALRQGLEKKGWASE 234
           DFDVNRKRIKALR  LEKKGWASE
Sbjct: 210 DFDVNRKRIKALRLKLEKKGWASE 225

[Close]

BLAST of Spo18862.1 vs. NCBI nr
Match: gi|747090997|ref|XP_011093210.1| (PREDICTED: uncharacterized protein LOC105173228 [Sesamum indicum])

HSP 1 Score: 303.5 bits (776), Expect = 3.200e-79
Identity = 159/237 (67.09%), Postives = 177/237 (74.68%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKT--HQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDA 60
           MASMA S +H  T K     PK+  +    L I+S  Q      Q  H +          
Sbjct: 1   MASMASSSTHFYTHKTYKTNPKSSLNPLFKLSILSHHQEDEPPIQTTHPK---------- 60

Query: 61  QINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTA 120
              RRE++LR SE+A + AIFHFSGTKP+YLGVQKNP  LALCPAT NC+STSE+ SD  
Sbjct: 61  --GRREIMLRCSEVAVLGAIFHFSGTKPNYLGVQKNPGGLALCPATNNCVSTSENISDLT 120

Query: 121 HYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESP 180
           HYAPPWNYNPE+GRGSK PVSRE AM+ELL VI+STKPD FTPK  EKRDDYVRVEYESP
Sbjct: 121 HYAPPWNYNPEEGRGSKKPVSREQAMEELLQVIKSTKPDNFTPKIAEKRDDYVRVEYESP 180

Query: 181 IMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENT 236
           IMGFVDDVEFWFPPGKK IVQYRSASR G+FDFD+NRKRIKALR  LEKKGWASEN+
Sbjct: 181 IMGFVDDVEFWFPPGKKPIVQYRSASRFGNFDFDINRKRIKALRLALEKKGWASENS 225

[Close]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035180 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 2.800e-130
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60
           MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI
Sbjct: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60

Query: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120
           NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY
Sbjct: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120

Query: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180
           APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM
Sbjct: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180

Query: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY
Sbjct: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 236

[Close]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ74_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019270 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.400e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1

		  
Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 1   MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 60

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 61  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 120

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 121 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 180

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 181 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 222

[Close]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A068VB46_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003890001 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.900e-81
Identity = 155/204 (75.98%), Postives = 174/204 (85.29%), Query Frame = 1

		  
Query: 30  RIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYL 89
           RII  +Q QPQ Q      + Q QN+   Q  RRE++LRSSELA + AIFHFSGTKP+YL
Sbjct: 30  RIIRAEQLQPQPQP-----QPQPQNQ---QAGRREIVLRSSELAVLGAIFHFSGTKPNYL 89

Query: 90  GVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLA 149
           G+QKNPPSLALCPAT NC+STSE++SD  HYAPPWNYNPE+GRGS NPVSREVAMQELL 
Sbjct: 90  GIQKNPPSLALCPATNNCVSTSENTSDLTHYAPPWNYNPEEGRGSTNPVSREVAMQELLE 149

Query: 150 VIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSF 209
            I+STKPD F P+ +E++DDYVRVEYESPIMGFVDDVEFWFPPGKKS+VQYRSASRLG+F
Sbjct: 150 AIKSTKPDNFNPRIVEQKDDYVRVEYESPIMGFVDDVEFWFPPGKKSLVQYRSASRLGNF 209

Query: 210 DFDVNRKRIKALRQGLEKKGWASE 234
           DFDVNRKRIKALR  LEKKGWASE
Sbjct: 210 DFDVNRKRIKALRLKLEKKGWASE 225

[Close]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A061DTW5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_005508 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.500e-77
Identity = 146/189 (77.25%), Postives = 162/189 (85.71%), Query Frame = 1

		  
Query: 48  RKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNC 107
           + QQ  N+ D QI RRE+ILRSSELA I AIF FSG KP YLGVQKNPP+LALCPATKNC
Sbjct: 37  QSQQSDNQSDNQIPRREIILRSSELAVIGAIFSFSGKKPDYLGVQKNPPALALCPATKNC 96

Query: 108 LSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKR 167
           +STSE+ SD  HY PPWNYN   GR  K PV+REVAM+ELL VI+STKPD+FTPK +EK+
Sbjct: 97  VSTSENVSDLTHYTPPWNYN--GGRNRKKPVTREVAMEELLQVIKSTKPDKFTPKIVEKK 156

Query: 168 DDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEK 227
           DDYVRVEYES I+GFVDDVEFWFPPGK SIV+YRSASR+GSFDFDVNRKRIKALRQ LEK
Sbjct: 157 DDYVRVEYESLILGFVDDVEFWFPPGKNSIVEYRSASRIGSFDFDVNRKRIKALRQELEK 216

Query: 228 KGWASENTY 237
           KGWASE T+
Sbjct: 217 KGWASEETF 223

[Close]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A061DU26_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_005508 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.000e-77
Identity = 144/183 (78.69%), Postives = 159/183 (86.89%), Query Frame = 1

		  
Query: 54  NKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSES 113
           N+ D QI RRE+ILRSSELA I AIF FSG KP YLGVQKNPP+LALCPATKNC+STSE+
Sbjct: 1   NQSDNQIPRREIILRSSELAVIGAIFSFSGKKPDYLGVQKNPPALALCPATKNCVSTSEN 60

Query: 114 SSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRV 173
            SD  HY PPWNYN   GR  K PV+REVAM+ELL VI+STKPD+FTPK +EK+DDYVRV
Sbjct: 61  VSDLTHYTPPWNYN--GGRNRKKPVTREVAMEELLQVIKSTKPDKFTPKIVEKKDDYVRV 120

Query: 174 EYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASE 233
           EYES I+GFVDDVEFWFPPGK SIV+YRSASR+GSFDFDVNRKRIKALRQ LEKKGWASE
Sbjct: 121 EYESLILGFVDDVEFWFPPGKNSIVEYRSASRIGSFDFDVNRKRIKALRQELEKKGWASE 180

Query: 234 NTY 237
            T+
Sbjct: 181 ETF 181

[Close]

BLAST of Spo18862.1 vs. TAIR (Arabidopsis)
Match: AT3G60810.1 (unknown protein)

HSP 1 Score: 254.2 bits (648), Expect = 7.800e-68
Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 1

		  
Query: 60  INRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAH 119
           I RR++ILRSSELA I AIF  SG KP YLGVQKN   LALCPAT NC+STSE+ SD  H
Sbjct: 43  IGRRDIILRSSELAMIGAIFQLSGKKPDYLGVQKNE-RLALCPATNNCISTSENISDRVH 102

Query: 120 YAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPI 179
           YAPPWNYN     G K PV+R+VAM+ELL VI+S KPD+FTP+ +EK+DDYV VEYESPI
Sbjct: 103 YAPPWNYNG----GRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVEYESPI 162

Query: 180 MGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           +G VDDVEF F PGK S V+YRSASR G+FDFDVNRKRIKALRQ LEKKGW SEN++
Sbjct: 163 LGLVDDVEFLFTPGKNSKVEYRSASRKGNFDFDVNRKRIKALRQELEKKGWVSENSF 214

The following BLAST results are available for this feature:

BLAST of Spo18862.1 vs. NCBI nr
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
BLAST of Spo18862.1 vs. ExPASy Swiss-Prot
BLAST of Spo18862.1 vs. TAIR (Arabidopsis)

BLAST of Spo18862.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902231493\|gb\|KNA22274.1\|	3.9e-130	100.	hypothetical protein SOVF_0351...	[more]
gi\|731361270\|ref\|XP_010692264.1\|	3.5e-94	76.2	PREDICTED: uncharacterized pro...	[more]
gi\|870847755\|gb\|KMT00103.1\|	3.5e-94	76.2	hypothetical protein BVRB_1g01...	[more]
gi\|661878472\|emb\|CDP17774.1\|	9.9e-81	75.9	unnamed protein product [Coffe...	[more]
gi\|747090997\|ref\|XP_011093210.1\|	3.2e-79	67.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RTN3_SPIOL	2.8e-130	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BJ74_BETVU	2.4e-94	76.2	Uncharacterized protein OS=Bet...	[more]
A0A068VB46_COFCA	6.9e-81	75.9	Uncharacterized protein OS=Cof...	[more]
A0A061DTW5_THECC	3.5e-77	77.2	Uncharacterized protein isofor...	[more]
A0A061DU26_THECC	6.0e-77	78.6	Uncharacterized protein isofor...	[more]

BLAST of Spo18862.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo18862.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT3G60810.1	7.8e-68	71.7	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010865	Protein of unknown function DUF1499	PFAM	PF07386	DUF1499	coord: 98..224 score: 1.7
None	No IPR available	PANTHER	PTHR34801	FAMILY NOT NAMED	coord: 8..236 score: 3.2E
None	No IPR available	PANTHER	PTHR34801:SF1	SUBFAMILY NOT NAMED	coord: 8..236 score: 3.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006772	thiamine metabolic process
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009229	thiamine diphosphate biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0044260	cellular macromolecule metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0030975	thiamine binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004788	thiamine diphosphokinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11480	0.69	Barchart \| Table
Spo04153	0.67	Barchart \| Table
Spo11246	0.67	Barchart \| Table
Spo02826	0.66	Barchart \| Table
Spo07973	0.66	Barchart \| Table
Spo18617	0.66	Barchart \| Table
Spo25921	0.66	Barchart \| Table